CSPI05G09220 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G09220
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	60S ribosomal protein L35-like
Location	Chr5: 7809004 .. 7810612 (-)
RNA-Seq Expression	CSPI05G09220
Synteny	CSPI05G09220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTCAACCTAGGGTTTTGCAGACCACCGCCGAATCCCAAAACTCAACTCCCGGTCTCTGCTTAACAGATTCTAATGGGTAAAATCTTACGAACCTTTGCTTAACTGAACCTTTTTTCTTCATGAATTTCTCCGTTGTCGAGCAACATTCATCATTTCGAGATTGATTTCGTTTTTGTTTTTTCTTTTTTCTTTTTGTATTTCTGTGTGTGATTTTCTTGATTTGATTGAGTGCAGCGAGAATTAAGGTTCATGAGCTTAGACAAAAGTCGAAGGGGGATCTTTTGGCCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTCCTCCGTGTTGCTAAGGTCACTGGTGGTGCTCCTAACAAGCTTTCCAAAATGTATTTTCTTCTACTTTTCTATTGATTTTCTTCTTATTTTTTCTGTTTGTATATGTATTTTGATTGTTTTGCTTTTGGGTTTTTGCTATGATGTTTATTGGGTTTGTTTTGGTTGTTCTTCACTGCAGTAAGGTAGTGAGGTTGTCTATCGCTCAGGTATTGACAGTGATTTCCCAGAAGCAGAAAGCTGCTCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAACACCAAGTAAGGCCTTTCTTCATTTGAAATTACATATTCGTATATATTCCTTACCATGCGGTTATATTTATATCTCTATGCTTAAAATTCTGCTAAATCAATTATTCCTTGTCAGTGTCTTATTTTCCAATGCTGGATTATCTATGTTGAATGGATATGGATTCTGTTGTGTGCTATAGATTTATTGTTAACATTGAAGTTTCGAGTGTCTAACGTGTACATTTTTATCTCTTTCGCCATTTATTTGACTCTTATCTTCAAGATTGTTGAGCCACTGGATTTTAGAAATTAAAAGATACTTCTTTTTATTAGAGAATGATGCTACTAGAATTGGAAGCTTTGTATATAGTTTTCATGCCTCAGTACTATTAACAAGACTCAATTTCATGCCTTATTTAGAATGTGTATATTTGAGGTAATCTCTCAGTTCTCTATGGTAATGAAATACTAGGAGTTATCAGAATTGTGTGTGTGTTGTATTGAAATACTGGAAGTGTTGTTTTTCCCTCTTTCTGATTCGGTATTCTTGTATTGCGTTTTTCAGGCATCTCTAAAGACGGAGAGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTATGCCATTAAGGTGTAGGCTTAGAGAGAATTGATTGATGATCCTCCGTGGTATCATGCATCTTCTACTCATTTTGGCTTTTGATTTATCTATAACATTATTCAGACTTGAGTGCCTATTTTCAATCTTATTGTTAGATCTTTGAACTTTGAAATCTTTCCTTTCTTTCCATGTAATACTTTAGTTTGCCAAGTTATAATGAAATGGTTTTGGTTAATGGACCTTAGGCAGCTCTATCTTTTGCTAAGTTGAATGTGCTCTGATTTTAAACCATAGGCAGCTCTATATTTCCATTTGATTCTTTAGTTTCCTAAGCAATAAATCTGCAGCAATTTGGTGTTTCTCTTTACCTGAG

mRNA sequence

TTTCTTCAACCTAGGGTTTTGCAGACCACCGCCGAATCCCAAAACTCAACTCCCGGTCTCTGCTTAACAGATTCTAATGGCGAGAATTAAGGTTCATGAGCTTAGACAAAAGTCGAAGGGGGATCTTTTGGCCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTCCTCCGTGTTGCTAAGGTCACTGGTGGTGCTCCTAACAAGCTTTCCAAAATTAAGGTAGTGAGGTTGTCTATCGCTCAGGTATTGACAGTGATTTCCCAGAAGCAGAAAGCTGCTCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAACACCAAGCATCTCTAAAGACGGAGAGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTATGCCATTAAGGTGTAGGCTTAGAGAGAATTGATTGATGATCCTCCGTGGTATCATGCATCTTCTACTCATTTTGGCTTTTGATTTATCTATAACATTATTCAGACTTGAGTGCCTATTTTCAATCTTATTGTTAGATCTTTGAACTTTGAAATCTTTCCTTTCTTTCCATGTAATACTTTAGTTTGCCAAGTTATAATGAAATGGTTTTGGTTAATGGACCTTAGGCAGCTCTATCTTTTGCTAAGTTGAATGTGCTCTGATTTTAAACCATAGGCAGCTCTATATTTCCATTTGATTCTTTAGTTTCCTAAGCAATAAATCTGCAGCAATTTGGTGTTTCTCTTTACCTGAG

Coding sequence (CDS)

ATGGCGAGAATTAAGGTTCATGAGCTTAGACAAAAGTCGAAGGGGGATCTTTTGGCCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTCCTCCGTGTTGCTAAGGTCACTGGTGGTGCTCCTAACAAGCTTTCCAAAATTAAGGTAGTGAGGTTGTCTATCGCTCAGGTATTGACAGTGATTTCCCAGAAGCAGAAAGCTGCTCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAACACCAAGCATCTCTAAAGACGGAGAGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTATGCCATTAAGGTGTAG

Protein sequence

MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAIKV*

Homology

[Close]

BLAST of CSPI05G09220 vs. ExPASy Swiss-Prot
Match: Q9M5L0 (60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.4e-51
Identity = 112/123 (91.06%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQK+K +LL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ SLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQQSLKTEREKKKEMYFPMRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. ExPASy Swiss-Prot
Match: O80626 (60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 9.9e-51
Identity = 111/123 (90.24%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR+KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. ExPASy Swiss-Prot
Match: Q9SF53 (60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.9e-50
Identity = 111/123 (90.24%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR+KSK DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
            SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. ExPASy Swiss-Prot
Match: Q9LZ41 (60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 6.4e-50
Identity = 111/123 (90.24%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. ExPASy Swiss-Prot
Match: Q9M3D2 (60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.2e-49
Identity = 109/123 (88.62%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR KSK DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
            SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKK+MY+P+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. ExPASy TrEMBL
Match: A0A0A0KLK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G178720 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.8e-54
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. ExPASy TrEMBL
Match: A0A1S3CF13 (60S ribosomal protein L35-like OS=Cucumis melo OX=3656 GN=LOC103500179 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.2e-53
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ SLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQESLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. ExPASy TrEMBL
Match: A0A6J1CDN9 (60S ribosomal protein L35-2 OS=Momordica charantia OX=3673 GN=LOC111010277 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.4e-53
Identity = 121/123 (98.37%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSK DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. ExPASy TrEMBL
Match: A0A5A7V711 (60S ribosomal protein L35-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00120 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.4e-52
Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 2   ARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 34  ARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 93

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ SLKTERQKKKEMYYPLRKYAI
Sbjct: 94  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQESLKTERQKKKEMYYPLRKYAI 153

Query: 122 K 123
           K
Sbjct: 154 K 154

[Close]

BLAST of CSPI05G09220 vs. ExPASy TrEMBL
Match: A0A6J1BZV3 (60S ribosomal protein L35 OS=Momordica charantia OX=3673 GN=LOC111006751 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.4e-52
Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSK DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMY+PLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYFPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. NCBI nr
Match: XP_004150961.1 (60S ribosomal protein L35 [Cucumis sativus] >KGN50505.1 hypothetical protein Csa_000675 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. NCBI nr
Match: XP_008461617.1 (PREDICTED: 60S ribosomal protein L35-like [Cucumis melo])

HSP 1 Score: 218.0 bits (554), Expect = 4.5e-53
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ SLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQESLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. NCBI nr
Match: XP_038891782.1 (60S ribosomal protein L35-like [Benincasa hispida])

HSP 1 Score: 217.2 bits (552), Expect = 7.8e-53
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKGDLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. NCBI nr
Match: XP_022139337.1 (60S ribosomal protein L35-2 [Momordica charantia])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 121/123 (98.37%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSK DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. NCBI nr
Match: XP_022134532.1 (60S ribosomal protein L35 [Momordica charantia])

HSP 1 Score: 214.5 bits (545), Expect = 5.0e-52
Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSK DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMY+PLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYFPLRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. TAIR 10
Match: AT2G39390.1 (Ribosomal L29 family protein )

HSP 1 Score: 200.7 bits (509), Expect = 7.0e-52
Identity = 111/123 (90.24%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR+KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. TAIR 10
Match: AT3G09500.1 (Ribosomal L29 family protein )

HSP 1 Score: 199.1 bits (505), Expect = 2.0e-51
Identity = 111/123 (90.24%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR+KSK DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
            SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. TAIR 10
Match: AT5G02610.1 (Ribosomal L29 family protein )

HSP 1 Score: 198.0 bits (502), Expect = 4.5e-51
Identity = 111/123 (90.24%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
           ISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYA
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

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BLAST of CSPI05G09220 vs. TAIR 10
Match: AT3G55170.1 (Ribosomal L29 family protein )

HSP 1 Score: 195.7 bits (496), Expect = 2.3e-50
Identity = 109/123 (88.62%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR KSK DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
            SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKK+MY+P+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

[Close]

BLAST of CSPI05G09220 vs. TAIR 10
Match: AT3G55170.2 (Ribosomal L29 family protein )

HSP 1 Score: 195.7 bits (496), Expect = 2.3e-50
Identity = 109/123 (88.62%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR KSK DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120
            SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKK+MY+P+RKYA
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120

Query: 121 IKV 124
           IKV
Sbjct: 121 IKV 123

The following BLAST results are available for this feature:

BLAST of CSPI05G09220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M5L0	4.4e-51	91.06	60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1	[more]
O80626	9.9e-51	90.24	60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1	[more]
Q9SF53	2.9e-50	90.24	60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1	[more]
Q9LZ41	6.4e-50	90.24	60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1	[more]
Q9M3D2	3.2e-49	88.62	60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1	[more]

BLAST of CSPI05G09220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLK6	5.8e-54	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G178720 PE=3 SV=1	[more]
A0A1S3CF13	2.2e-53	99.19	60S ribosomal protein L35-like OS=Cucumis melo OX=3656 GN=LOC103500179 PE=3 SV=1	[more]
A0A6J1CDN9	8.4e-53	98.37	60S ribosomal protein L35-2 OS=Momordica charantia OX=3673 GN=LOC111010277 PE=3 ...	[more]
A0A5A7V711	2.4e-52	99.17	60S ribosomal protein L35-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A6J1BZV3	2.4e-52	97.56	60S ribosomal protein L35 OS=Momordica charantia OX=3673 GN=LOC111006751 PE=3 SV...	[more]

BLAST of CSPI05G09220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150961.1	1.2e-53	100.00	60S ribosomal protein L35 [Cucumis sativus] >KGN50505.1 hypothetical protein Csa...	[more]
XP_008461617.1	4.5e-53	99.19	PREDICTED: 60S ribosomal protein L35-like [Cucumis melo]	[more]
XP_038891782.1	7.8e-53	98.37	60S ribosomal protein L35-like [Benincasa hispida]	[more]
XP_022139337.1	1.7e-52	98.37	60S ribosomal protein L35-2 [Momordica charantia]	[more]
XP_022134532.1	5.0e-52	97.56	60S ribosomal protein L35 [Momordica charantia]	[more]

BLAST of CSPI05G09220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39390.1	7.0e-52	90.24	Ribosomal L29 family protein	[more]
AT3G09500.1	2.0e-51	90.24	Ribosomal L29 family protein	[more]
AT5G02610.1	4.5e-51	90.24	Ribosomal L29 family protein	[more]
AT3G55170.1	2.3e-50	88.62	Ribosomal L29 family protein	[more]
AT3G55170.2	2.3e-50	88.62	Ribosomal L29 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..34
None	No IPR available	GENE3D	6.10.250.3450		coord: 78..123 e-value: 3.8E-22 score: 80.2
None	No IPR available	PANTHER	PTHR45722:SF18	60S RIBOSOMAL PROTEIN L35-LIKE	coord: 1..123
None	No IPR available	CDD	cd00427	Ribosomal_L29_HIP	coord: 8..64 e-value: 4.239E-11 score: 52.4899
IPR001854	Ribosomal protein L29/L35	PFAM	PF00831	Ribosomal_L29	coord: 8..64 e-value: 2.2E-17 score: 62.8
IPR001854	Ribosomal protein L29/L35	TIGRFAM	TIGR00012	TIGR00012	coord: 8..64 e-value: 2.1E-18 score: 64.1
IPR001854	Ribosomal protein L29/L35	HAMAP	MF_00374	Ribosomal_L29	coord: 4..64 score: 12.877207
IPR036049	Ribosomal protein L29/L35 superfamily	GENE3D	1.10.287.310		coord: 1..77 e-value: 2.4E-35 score: 122.7
IPR036049	Ribosomal protein L29/L35 superfamily	SUPERFAMILY	46561	Ribosomal protein L29 (L29p)	coord: 4..65
IPR045059	60S ribosomal protein L35	PANTHER	PTHR45722	60S RIBOSOMAL PROTEIN L35	coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G09220.1	CSPI05G09220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome