CSPI05G08810 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G08810
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LOB domain-containing protein
Location	Chr5: 7486684 .. 7487882 (-)
RNA-Seq Expression	CSPI05G08810
Synteny	CSPI05G08810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTCACCAAAAAAGAGAGAGAAAATATTCTCTCTCCTCTCGCCCCCCACATTCTCTCTCTAGAAAATTTTAATTAAATACATATATATATATTTTTTTAATTTATGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATAATCCAAATAATCCTTTATCTTTCTCCCCAATGTCTTCTTCTCCACCCACTTCTCAACCATCCTCCCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCTGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGTATGCCCTCCATTTCTTTTCCTTTTTTTTTTTTTTTTTAATCAAAAGTCTATCATTAGAATCTCCAACTTTCCTACAATGCCCTTTGAAATGGTCTAATATATCTTCTCATATATACTTACTATAATATTCTATATTCTTTTAGATGAGGGATTTTAAAAAAGGAAGAAAAGAAAATCTATTTTTGTTTAGAGTTTAAGGTTAGAAAATTACTATTAGTAATAATGGTAATAAGTTTCTTTAGTATTTCTAAATGTAAGAAAAATAAATAAGAGGGGTATAGTTGGATTTAACTTAGAAAAGAAAATGAATTGATTTGATTTGACTTAACTAGGTTTTTTTTACTTTTGATGGGACTTAATTAATGTATCAATTCCCGTAATTGGTGGAATTTTGGTTTAATTAAACTTTCATTTAGGTTAGATTAAAATTTAGTTGAATTTTGATAGAGGTTATTGAGAAAAGTTTACAAATTTTGTAGGAGCTTCCGGAGTGTCAAAGAACGGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGTCTGAGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAGCCTGTTTGGCAGCCGCAACTGGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCATGGGAGCCACTCTGGACGTGA

mRNA sequence

AAAACTCACCAAAAAAGAGAGAGAAAATATTCTCTCTCCTCTCGCCCCCCACATTCTCTCTCTAGAAAATTTTAATTAAATACATATATATATATTTTTTTAATTTATGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATAATCCAAATAATCCTTTATCTTTCTCCCCAATGTCTTCTTCTCCACCCACTTCTCAACCATCCTCCCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCTGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGAGCTTCCGGAGTGTCAAAGAACGGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGTCTGAGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAGCCTGTTTGGCAGCCGCAACTGGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCATGGGAGCCACTCTGGACGTGA

Coding sequence (CDS)

ATGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATAATCCAAATAATCCTTTATCTTTCTCCCCAATGTCTTCTTCTCCACCCACTTCTCAACCATCCTCCCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCTGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTCTTGCAAGAGCTTCCGGAGTGTCAAAGAACGGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGTCTGAGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAGCCTGTTTGGCAGCCGCAACTGGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCATGGGAGCCACTCTGGACGTGA

Protein sequence

MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT*

Homology

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BLAST of CSPI05G08810 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.1e-54
Identity = 120/185 (64.86%), Postives = 141/185 (76.22%), Query Frame = 0


Query: 27  SFSPMSSSPPTSQPSSPPP---PAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTI 86
           S + ++++P  S  SSPPP   P VVLSPCAACKILRRRC E+CVLAPYFPPTDP KFTI
Sbjct: 5   SDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTI 64

Query: 87  AHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQA 146
           AHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVSELQA
Sbjct: 65  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQA 124

Query: 147 QLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWQPQLVDTTCFLDDATLSSP----W 204
           QLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++     W
Sbjct: 125 QLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWW 184

[Close]

BLAST of CSPI05G08810 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-52
Identity = 127/227 (55.95%), Postives = 144/227 (63.44%), Query Frame = 0


Query: 4   VAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRC 63
           VAK T  + P         N+P   SP SS PP   P  PP P VVLSPCAACKILRRRC
Sbjct: 18  VAKVTETTTPV--------NSP---SPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRC 77

Query: 64  VEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDP 123
            +KCVLAPYFPPTDP KFTIAHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDP
Sbjct: 78  ADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDP 137

Query: 124 VYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQS----PEPVWQ 183
           VYG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI   M Q+     E   Q
Sbjct: 138 VYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQ 197

Query: 184 PQLVDTTCFLDDATLSSP-----------------------WEPLWT 204
               +++    D  +SSP                       W+PLWT
Sbjct: 198 KMSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of CSPI05G08810 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 3.3e-35
Identity = 72/108 (66.67%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCA+CK+LRRRC + C+ APYFPP DP KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 159
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of CSPI05G08810 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCAACK+LRRRC + CV +PYFP  +P KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 161
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of CSPI05G08810 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 3.4e-32
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 41  SSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQEL 100
           S PP     ++PCAACK+LRRRC ++C  +PYF P +P KF   H+VFGASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 101 PECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 160
           PE QR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

[Close]

BLAST of CSPI05G08810 vs. ExPASy TrEMBL
Match: A0A1S3BDP1 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103488750 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.3e-108
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60
           MAYVAKCTNNSPPTPIS NNNPNNPLSFSPMSSSPPTSQPSSPPPP VVLSPCAACKILR
Sbjct: 1   MAYVAKCTNNSPPTPISFNNNPNNPLSFSPMSSSPPTSQPSSPPPPPVVLSPCAACKILR 60

Query: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120
           RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL
Sbjct: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120

Query: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180
           RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP
Sbjct: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180

Query: 181 QLVDTTCFLDDATLSSPWEPLWT 204
           QLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QLVDTTCFLDDATLSSPWEPLWT 203

[Close]

BLAST of CSPI05G08810 vs. ExPASy TrEMBL
Match: A0A6J1GZI6 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458656 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.2e-94
Identity = 183/212 (86.32%), Postives = 193/212 (91.04%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSS---------SPPTSQPSSPPPPAVVLS 60
           M Y+AKCT N+P TPI+V   PN+PLS+SP+SS         SPPTSQPSSPPPP V+LS
Sbjct: 1   MXYLAKCT-NAPSTPITV---PNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPTVILS 60

Query: 61  PCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS 120
           PCAACKILRRRCVEKCVLAPYFPP++PLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS
Sbjct: 61  PCAACKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS 120

Query: 121 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR 180
           MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMR
Sbjct: 121 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMR 180

Query: 181 QSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 204
           QSP+PVW PQLVDTTCFLDDA LSSPWEPLWT
Sbjct: 181 QSPDPVWPPQLVDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of CSPI05G08810 vs. ExPASy TrEMBL
Match: A0A6J1KJX7 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493855 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.7e-93
Identity = 182/212 (85.85%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSS---------SPPTSQPSSPPPPAVVLS 60
           MAY+AKCT N+P TPI+V+   N+PLS+SP+SS         SPPTSQPSSPPPPAV+LS
Sbjct: 1   MAYLAKCT-NAPSTPITVS---NHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPAVILS 60

Query: 61  PCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS 120
           PCAACKILRRRCVEKCVLAPYFPP++PLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS
Sbjct: 61  PCAACKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS 120

Query: 121 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR 180
           MVYEA+ARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMR
Sbjct: 121 MVYEAHARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMR 180

Query: 181 QSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 204
           QSP+PVW PQL DTTCFLDDA LSSPWEPLWT
Sbjct: 181 QSPDPVWPPQLPDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of CSPI05G08810 vs. ExPASy TrEMBL
Match: A0A0A0KNK9 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175870 PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 8.8e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 31  MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 90
           MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA
Sbjct: 1   MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 60

Query: 91  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 150
           SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA
Sbjct: 61  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 120

Query: 151 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 204
           EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 121 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 173

[Close]

BLAST of CSPI05G08810 vs. ExPASy TrEMBL
Match: A0A5A7SSI2 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00380 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.4e-91
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 31  MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 90
           MSSSPPTSQPSSPPPP VVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA
Sbjct: 1   MSSSPPTSQPSSPPPPPVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 60

Query: 91  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 150
           SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA
Sbjct: 61  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 120

Query: 151 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 204
           EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 121 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 173

[Close]

BLAST of CSPI05G08810 vs. NCBI nr
Match: XP_004143693.1 (LOB domain-containing protein 1 [Cucumis sativus] >KAE8647965.1 hypothetical protein Csa_000465 [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 3.3e-109
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60
           MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR
Sbjct: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60

Query: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120
           RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL
Sbjct: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120

Query: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180
           RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP
Sbjct: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180

Query: 181 QLVDTTCFLDDATLSSPWEPLWT 204
           QLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QLVDTTCFLDDATLSSPWEPLWT 203

[Close]

BLAST of CSPI05G08810 vs. NCBI nr
Match: XP_008445860.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 401.4 bits (1030), Expect = 4.8e-108
Identity = 201/203 (99.01%), Postives = 201/203 (99.01%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60
           MAYVAKCTNNSPPTPIS NNNPNNPLSFSPMSSSPPTSQPSSPPPP VVLSPCAACKILR
Sbjct: 1   MAYVAKCTNNSPPTPISFNNNPNNPLSFSPMSSSPPTSQPSSPPPPPVVLSPCAACKILR 60

Query: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120
           RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL
Sbjct: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120

Query: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180
           RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP
Sbjct: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180

Query: 181 QLVDTTCFLDDATLSSPWEPLWT 204
           QLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QLVDTTCFLDDATLSSPWEPLWT 203

[Close]

BLAST of CSPI05G08810 vs. NCBI nr
Match: XP_023532963.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo] >KAG6601046.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031857.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355.9 bits (912), Expect = 2.3e-94
Identity = 184/212 (86.79%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSS---------SPPTSQPSSPPPPAVVLS 60
           MAY+AKCT N+P TPI+V   PN+PLS+SP+SS         SPPTSQPSSPPPP V+LS
Sbjct: 1   MAYLAKCT-NAPSTPITV---PNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPTVILS 60

Query: 61  PCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS 120
           PCAACKILRRRCVEKCVLAPYFPP++PLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS
Sbjct: 61  PCAACKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS 120

Query: 121 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR 180
           MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMR
Sbjct: 121 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMR 180

Query: 181 QSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 204
           QSP+PVW PQLVDTTCFLDDA LSSPWEPLWT
Sbjct: 181 QSPDPVWPPQLVDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of CSPI05G08810 vs. NCBI nr
Match: XP_038892948.1 (LOB domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 355.5 bits (911), Expect = 3.0e-94
Identity = 190/214 (88.79%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSS-----------SPPTSQPSSPPPPAVV 60
           MAYVAKCT NSPPTPI+V N+    LSFSPMSS           SPPTSQPSSPP  AVV
Sbjct: 1   MAYVAKCT-NSPPTPINVPNH----LSFSPMSSSSAAATTTNFASPPTSQPSSPPLSAVV 60

Query: 61  LSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAV 120
           LSPCAACKILRRRCVEKCVLAPYFPPT+PLKFTIAHRVFGASNIIKFLQELPE QRTDAV
Sbjct: 61  LSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAV 120

Query: 121 SSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICME 180
           SSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICME
Sbjct: 121 SSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICME 180

Query: 181 MRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 204
           MRQSPEPVW PQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 MRQSPEPVWPPQLVDTTCFLDDATLSSPWEPLWT 209

[Close]

BLAST of CSPI05G08810 vs. NCBI nr
Match: XP_022957188.1 (LOB domain-containing protein 1-like [Cucurbita moschata])

HSP 1 Score: 354.0 bits (907), Expect = 8.7e-94
Identity = 183/212 (86.32%), Postives = 193/212 (91.04%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSS---------SPPTSQPSSPPPPAVVLS 60
           M Y+AKCT N+P TPI+V   PN+PLS+SP+SS         SPPTSQPSSPPPP V+LS
Sbjct: 1   MXYLAKCT-NAPSTPITV---PNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPTVILS 60

Query: 61  PCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS 120
           PCAACKILRRRCVEKCVLAPYFPP++PLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS
Sbjct: 61  PCAACKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSS 120

Query: 121 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMR 180
           MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMR
Sbjct: 121 MVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMR 180

Query: 181 QSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 204
           QSP+PVW PQLVDTTCFLDDA LSSPWEPLWT
Sbjct: 181 QSPDPVWPPQLVDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of CSPI05G08810 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 212.6 bits (540), Expect = 2.9e-55
Identity = 120/185 (64.86%), Postives = 141/185 (76.22%), Query Frame = 0


Query: 27  SFSPMSSSPPTSQPSSPPP---PAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTI 86
           S + ++++P  S  SSPPP   P VVLSPCAACKILRRRC E+CVLAPYFPPTDP KFTI
Sbjct: 5   SDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTI 64

Query: 87  AHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQA 146
           AHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVSELQA
Sbjct: 65  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQA 124

Query: 147 QLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWQPQLVDTTCFLDDATLSSP----W 204
           QLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++     W
Sbjct: 125 QLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWW 184

[Close]

BLAST of CSPI05G08810 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 207.6 bits (527), Expect = 9.4e-54
Identity = 127/227 (55.95%), Postives = 144/227 (63.44%), Query Frame = 0


Query: 4   VAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRC 63
           VAK T  + P         N+P   SP SS PP   P  PP P VVLSPCAACKILRRRC
Sbjct: 18  VAKVTETTTPV--------NSP---SPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRC 77

Query: 64  VEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDP 123
            +KCVLAPYFPPTDP KFTIAHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDP
Sbjct: 78  ADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDP 137

Query: 124 VYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQS----PEPVWQ 183
           VYG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI   M Q+     E   Q
Sbjct: 138 VYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQ 197

Query: 184 PQLVDTTCFLDDATLSSP-----------------------WEPLWT 204
               +++    D  +SSP                       W+PLWT
Sbjct: 198 KMSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of CSPI05G08810 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.3e-36
Identity = 72/108 (66.67%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCA+CK+LRRRC + C+ APYFPP DP KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 159
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of CSPI05G08810 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35
Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 51  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 110
           SPCAACK+LRRRC + CV +PYFP  +P KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 111 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 161
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of CSPI05G08810 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 41  SSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQEL 100
           S PP     ++PCAACK+LRRRC ++C  +PYF P +P KF   H+VFGASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 101 PECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 160
           PE QR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

The following BLAST results are available for this feature:

BLAST of CSPI05G08810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	4.1e-54	64.86	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	1.3e-52	55.95	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q8LBW3	3.3e-35	66.67	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	2.1e-34	66.36	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8L5T5	3.4e-32	55.83	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of CSPI05G08810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDP1	2.3e-108	99.01	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103488750 PE=...	[more]
A0A6J1GZI6	4.2e-94	86.32	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]
A0A6J1KJX7	2.7e-93	85.85	LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493855...	[more]
A0A0A0KNK9	8.8e-92	100.00	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175870 PE=3 SV...	[more]
A0A5A7SSI2	3.4e-91	99.42	LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of CSPI05G08810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143693.1	3.3e-109	100.00	LOB domain-containing protein 1 [Cucumis sativus] >KAE8647965.1 hypothetical pro...	[more]
XP_008445860.1	4.8e-108	99.01	PREDICTED: LOB domain-containing protein 1-like [Cucumis melo]	[more]
XP_023532963.1	2.3e-94	86.79	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo] >KAG6601046.1 ...	[more]
XP_038892948.1	3.0e-94	88.79	LOB domain-containing protein 1-like [Benincasa hispida]	[more]
XP_022957188.1	8.7e-94	86.32	LOB domain-containing protein 1-like [Cucurbita moschata]	[more]

BLAST of CSPI05G08810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	2.9e-55	64.86	LOB domain-containing protein 1	[more]
AT2G28500.1	9.4e-54	55.95	LOB domain-containing protein 11	[more]
AT2G30130.1	2.3e-36	66.67	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	1.5e-35	66.36	LOB domain-containing protein 4	[more]
AT2G40470.1	2.4e-33	55.83	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..35
None	No IPR available	PANTHER	PTHR31301:SF160	LOB DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 34..185
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 34..185
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 52..149 e-value: 7.2E-40 score: 135.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 51..152 score: 25.538782

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G08810.1	CSPI05G08810.1	mRNA