CSPI05G08750 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G08750
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr5: 7419182 .. 7419601 (+)
RNA-Seq Expression	CSPI05G08750
Synteny	CSPI05G08750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTAAGATCTTTGATGCAATTGCGACTAGTGGCAGCAACAACCATATCGTTTTGAGGGAGTTTATGGATGGTTACTGCCAAGGTGTCGAGAACCATAATCAAATACATTCCTCATTTTTGCTCCAATCAACTATGGATACTCAGTTAATAGAGGCAAAAGGTTTTGTCAAGACTCTACGACTTGATGAGAACCATATATTGACAGAGACCAACACCGTCAAACATCACCTTACACGAATATCTGTCAAGGAGGCTAAACTAGAAGCAAAACAAATGGTGGTGCGGACAAACTCCGTCAAACTTTCTGACATAATTTCCAAGCACGACATGGAGCTTAAGCGAAAGCAGCATGAGATTCCAAAGACTTGCGAGGAAATTGACAAACTCGAATGTGCCCCAAATCGTTGGAGATGTTGA

mRNA sequence

ATGCGTAAGATCTTTGATGCAATTGCGACTAGTGGCAGCAACAACCATATCGTTTTGAGGGAGTTTATGGATGGTTACTGCCAAGGTGTCGAGAACCATAATCAAATACATTCCTCATTTTTGCTCCAATCAACTATGGATACTCAGTTAATAGAGGCAAAAGGTTTTGTCAAGACTCTACGACTTGATGAGAACCATATATTGACAGAGACCAACACCGTCAAACATCACCTTACACGAATATCTGTCAAGGAGGCTAAACTAGAAGCAAAACAAATGGTGGTGCGGACAAACTCCGTCAAACTTTCTGACATAATTTCCAAGCACGACATGGAGCTTAAGCGAAAGCAGCATGAGATTCCAAAGACTTGCGAGGAAATTGACAAACTCGAATGTGCCCCAAATCGTTGGAGATGTTGA

Coding sequence (CDS)

ATGCGTAAGATCTTTGATGCAATTGCGACTAGTGGCAGCAACAACCATATCGTTTTGAGGGAGTTTATGGATGGTTACTGCCAAGGTGTCGAGAACCATAATCAAATACATTCCTCATTTTTGCTCCAATCAACTATGGATACTCAGTTAATAGAGGCAAAAGGTTTTGTCAAGACTCTACGACTTGATGAGAACCATATATTGACAGAGACCAACACCGTCAAACATCACCTTACACGAATATCTGTCAAGGAGGCTAAACTAGAAGCAAAACAAATGGTGGTGCGGACAAACTCCGTCAAACTTTCTGACATAATTTCCAAGCACGACATGGAGCTTAAGCGAAAGCAGCATGAGATTCCAAAGACTTGCGAGGAAATTGACAAACTCGAATGTGCCCCAAATCGTTGGAGATGTTGA

Protein sequence

MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTLRLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEIPKTCEEIDKLECAPNRWRC*

Homology

[Close]

BLAST of CSPI05G08750 vs. ExPASy TrEMBL
Match: A0A5A7SWI5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1735G00170 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.1e-44
Identity = 99/134 (73.88%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 1   MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL 60
           MRKIF AIATSGSNN   L+E +DGY QGVENHNQ+ SS LLQST D QLIEAKGFVKTL
Sbjct: 1   MRKIFAAIATSGSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLIEAKGFVKTL 60

Query: 61  RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI 120
           R+DEN IL ET+TV+  L R+S KEAKLEAK   VRT   KLS IISK+++ELK+KQHEI
Sbjct: 61  RVDENRILEETSTVQRCLARLSAKEAKLEAKLKAVRTEFTKLSGIISKNEIELKQKQHEI 120

Query: 121 PKTCEEIDKLECAP 135
            KTCEEIDKLECAP
Sbjct: 121 SKTCEEIDKLECAP 134

[Close]

BLAST of CSPI05G08750 vs. ExPASy TrEMBL
Match: A0A5D3DE43 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold836G00150 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.1e-44
Identity = 99/134 (73.88%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 1   MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL 60
           MRKIF AIATSGSNN   L+E +DGY QGVENHNQ+ SS LLQST D QLIEAKGFVKTL
Sbjct: 1   MRKIFAAIATSGSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLIEAKGFVKTL 60

Query: 61  RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI 120
           R+DEN IL ET+TV+  L R+S KEAKLEAK   VRT   KLS IISK+++ELK+KQHEI
Sbjct: 61  RVDENRILEETSTVQRCLARLSAKEAKLEAKLKAVRTEFTKLSGIISKNEIELKQKQHEI 120

Query: 121 PKTCEEIDKLECAP 135
            KTCEEIDKLECAP
Sbjct: 121 SKTCEEIDKLECAP 134

[Close]

BLAST of CSPI05G08750 vs. ExPASy TrEMBL
Match: A0A1S4E6N4 (uncharacterized protein LOC103504169 OS=Cucumis melo OX=3656 GN=LOC103504169 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.1e-44
Identity = 99/134 (73.88%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 1   MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL 60
           MRKIF AIATSGSNN   L+E +DGY QGVENHNQ+ SS LLQST D QLIEAKGFVKTL
Sbjct: 1   MRKIFAAIATSGSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLIEAKGFVKTL 60

Query: 61  RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI 120
           R+DEN IL ET+TV+  L R+S KEAKLEAK   VRT   KLS IISK+++ELK+KQHEI
Sbjct: 61  RVDENRILEETSTVQRCLARLSAKEAKLEAKLKAVRTEFTKLSGIISKNEIELKQKQHEI 120

Query: 121 PKTCEEIDKLECAP 135
            KTCEEIDKLECAP
Sbjct: 121 SKTCEEIDKLECAP 134

[Close]

BLAST of CSPI05G08750 vs. ExPASy TrEMBL
Match: A0A5A7UZR8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00580 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.0e-44
Identity = 99/134 (73.88%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 1   MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL 60
           MRKIF AIA SGSNN   L+E +DGY QGVENHNQ+  S LLQST D QL+EAKGFVKTL
Sbjct: 1   MRKIFAAIAISGSNNLTFLKELVDGYFQGVENHNQMCFSILLQSTKDAQLMEAKGFVKTL 60

Query: 61  RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI 120
           RLDEN IL ET+TV+  L R+S KEAKLEAK  VVRT S KLSDIISK+++ELK+KQHEI
Sbjct: 61  RLDENCILEETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSDIISKNEIELKQKQHEI 120

Query: 121 PKTCEEIDKLECAP 135
            KTCEEIDK ECAP
Sbjct: 121 SKTCEEIDKHECAP 134

[Close]

BLAST of CSPI05G08750 vs. ExPASy TrEMBL
Match: A0A5D3C453 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00030 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.4e-42
Identity = 95/133 (71.43%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 1   MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL 60
           MRKIF AIATS SNN   L+E +DGY QGVENHNQ+ SS LLQST D QL+E KGFVKTL
Sbjct: 264 MRKIFAAIATSDSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTL 323

Query: 61  RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI 120
           RLDEN IL ET+TV+  L R+S KEAKLEAK  VVRT S KLS +ISK+++ELK+KQ EI
Sbjct: 324 RLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEIELKQKQREI 383

Query: 121 PKTCEEIDKLECA 134
            KTCEEIDKL+CA
Sbjct: 384 SKTCEEIDKLKCA 396

[Close]

BLAST of CSPI05G08750 vs. NCBI nr
Match: KAE8648578.1 (hypothetical protein Csa_008467 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 6.5e-72
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL 60
           MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL
Sbjct: 1   MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL 60

Query: 61  RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI 120
           RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI
Sbjct: 61  RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI 120

Query: 121 PKTCEEIDKLECAPNRWRC 140
           PKTCEEIDKLECAPNRWRC
Sbjct: 121 PKTCEEIDKLECAPNRWRC 139

[Close]

BLAST of CSPI05G08750 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 6.5e-48
Identity = 104/134 (77.61%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL 60
           M KIFDAIATSGS+N IVLRE ++GY QGVENHNQIHSSFLLQST D QL EAKGFVKTL
Sbjct: 836 MHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTL 895

Query: 61  RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI 120
           R+DEN IL ETNT K  LTR+S KEAKLEAK  +VR  S KLS II K+D+ELK+KQHEI
Sbjct: 896 RVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRAESAKLSGIIFKNDLELKQKQHEI 955

Query: 121 PKTCEEIDKLECAP 135
            KTCEEIDKLECAP
Sbjct: 956 SKTCEEIDKLECAP 969

[Close]

BLAST of CSPI05G08750 vs. NCBI nr
Match: XP_031739998.1 (uncharacterized protein LOC116403342 [Cucumis sativus] >XP_031745415.1 uncharacterized protein LOC105434487 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 2.3e-45
Identity = 101/133 (75.94%), Postives = 109/133 (81.95%), Query Frame = 0


Query: 1   MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL 60
           M KIFDAIAT GS+N IVLRE ++GY QGVENHNQIHSSFLLQST D QL EAKGFVKTL
Sbjct: 398 MHKIFDAIATCGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTL 457

Query: 61  RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI 120
           R+DEN IL ETNT K  LTR+S KEAKLEAK  +VR  S K S II K+D+ELK KQHEI
Sbjct: 458 RVDENRILAETNTAKRCLTRLSAKEAKLEAKLKMVRAESAKFSGIIFKNDLELKLKQHEI 517

Query: 121 PKTCEEIDKLECA 134
            KTCEEIDKLECA
Sbjct: 518 SKTCEEIDKLECA 530

[Close]

BLAST of CSPI05G08750 vs. NCBI nr
Match: XP_016903650.1 (PREDICTED: uncharacterized protein LOC103504169 [Cucumis melo] >KAA0033821.1 uncharacterized protein E6C27_scaffold1735G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 4.4e-44
Identity = 99/134 (73.88%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 1   MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL 60
           MRKIF AIATSGSNN   L+E +DGY QGVENHNQ+ SS LLQST D QLIEAKGFVKTL
Sbjct: 1   MRKIFAAIATSGSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLIEAKGFVKTL 60

Query: 61  RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI 120
           R+DEN IL ET+TV+  L R+S KEAKLEAK   VRT   KLS IISK+++ELK+KQHEI
Sbjct: 61  RVDENRILEETSTVQRCLARLSAKEAKLEAKLKAVRTEFTKLSGIISKNEIELKQKQHEI 120

Query: 121 PKTCEEIDKLECAP 135
            KTCEEIDKLECAP
Sbjct: 121 SKTCEEIDKLECAP 134

[Close]

BLAST of CSPI05G08750 vs. NCBI nr
Match: TYK21862.1 (uncharacterized protein E5676_scaffold836G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 4.4e-44
Identity = 99/134 (73.88%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 1   MRKIFDAIATSGSNNHIVLREFMDGYCQGVENHNQIHSSFLLQSTMDTQLIEAKGFVKTL 60
           MRKIF AIATSGSNN   L+E +DGY QGVENHNQ+ SS LLQST D QLIEAKGFVKTL
Sbjct: 1   MRKIFAAIATSGSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLIEAKGFVKTL 60

Query: 61  RLDENHILTETNTVKHHLTRISVKEAKLEAKQMVVRTNSVKLSDIISKHDMELKRKQHEI 120
           R+DEN IL ET+TV+  L R+S KEAKLEAK   VRT   KLS IISK+++ELK+KQHEI
Sbjct: 61  RVDENRILEETSTVQRCLARLSAKEAKLEAKLKAVRTEFTKLSGIISKNEIELKQKQHEI 120

Query: 121 PKTCEEIDKLECAP 135
            KTCEEIDKLECAP
Sbjct: 121 SKTCEEIDKLECAP 134

The following BLAST results are available for this feature:

BLAST of CSPI05G08750 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G08750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SWI5	2.1e-44	73.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DE43	2.1e-44	73.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4E6N4	2.1e-44	73.88	uncharacterized protein LOC103504169 OS=Cucumis melo OX=3656 GN=LOC103504169 PE=...	[more]
A0A5A7UZR8	8.0e-44	73.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3C453	4.4e-42	71.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CSPI05G08750 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648578.1	6.5e-72	100.00	hypothetical protein Csa_008467 [Cucumis sativus]	[more]
XP_031745312.1	6.5e-48	77.61	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
XP_031739998.1	2.3e-45	75.94	uncharacterized protein LOC116403342 [Cucumis sativus] >XP_031745415.1 uncharact...	[more]
XP_016903650.1	4.4e-44	73.88	PREDICTED: uncharacterized protein LOC103504169 [Cucumis melo] >KAA0033821.1 unc...	[more]
TYK21862.1	4.4e-44	73.88	uncharacterized protein E5676_scaffold836G00150 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI05G08750 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G08750.1	CSPI05G08750.1	mRNA