CSPI05G06790 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGCGGCACGTGTTTTGCTTCTTCCTTCTCTTGTCTGCAGCACGTTCGCCATTGTTGCTCCTCTCTTTTCTCGATCTGTTCCCGTAACTTTCTCTCAAGCAAACTCATTTCCAGATTCTTTTTCTTCTATCCTCTCTTCAATTTCATCTTCTTCCCCTCCTTTTTTTTTAATCATTATTTTGTGATCCTGCTTCACTCTTCTCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTGTGAGTTCATCCTTTTTTTCTTCTTTTTTCTCCTAGATTTCCTTCTTCTGGATCTGTAATCTTTTGCGGGATTTTATTTCATTTCGGCTTAATTTGTTTTTTTTTTCTCTTTTGTTTGTTTCTTTCTCTTAGTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGATAGCTACGTTGCATTTAAGGTGTGGGTTTTGTTTCTCTCTGTTTGAATTCTTTTGGGTTCGATTCAATCTCTGTGATTTGTGTAATTGATCTTTTCTACTGTGAAAATACCTTGATACTCGTAGTATTCAGCTGTTTTGGATTTGGACATGTAGGCGTTTGAACTTTCTATTCTTATTTCTTTTCCTTTTCTCTCTTGATGTATCATTTTTGCGCCAGATCACGTTGTGAACTTTGTTAATTTCGTCGATTTTGTATTAGCTTGTGTTGATTAATTTGTTCCACTATGTTTTTTTGTCTACTTAATGTGAAATTGATCCTTTTCTAGGTGAAAACTACGAACCCTAAAAAGTACTGTGTTCGCCCAAACACTGGAATTGTCTCGCCACGGTCAACATGCGACGTTATAGGTTCCAAATCCCAATATCAACTATCGTAATTTGTAGTTTTAAATTTTGAAATAAGTTTTTTTGGTTGCTGATAAAGGAAGTACTTTGTTTTGTAGTCACCATGCAAGCCCAGAAAGAGGCTCCTTCTGATATGCAATGCAAAGATAAATTCCTCCTTCAGAGTGTTAAAACAGTTGATGGCGCAACCGCAAAGGATATCAATGCAGAAATGGTAGGTATAGTGTGATTGTTTAAAGCTTGTGGTTAGCATTAGCATTCTACTTATATTTATGGGCGTGGGGTTTGCAGTTCAACAAGGAGGCTGGGCATGTGGTCGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCCGAAGGTTCTGAAGAAGGTTCCTCCCCAAGAGGTTCTGTATCGGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGTGAGTAGTTTGGGTTCTCTTTTTTTCCTTTTCATTCTTCTACACTGTTGATTGACACACCTTCACCTCCTGTTTGTAGGCTACAAGGGGATATGTTGAACGGTCGGAGCCCCAGGATAAATCTGCAGAGGTAAAAAAATTGGATGGTTGTTGGTATACTGCAGGTGTTAAGTTTCTTGTCTGCAAATATATAGATGACTCTCTCTTTTCTTTTCTGTGAATCGGTTGCCTGATTTATGTGCATATCTTGTGGTGTATTTAAAATTGTCACGCCCAAATTGCTATTTCTATTTAACTTTTATTTTATTAAATAGAATTTTATGCTAGAACTAGTTGACTTACTTGAGAAGTTTTTGGCGGATTTGTTACATGATAGAAGTATTTGTTTAGTAAGGATTACTCAAACTGGTTAGCTAGACTTTAAGCATATTTTATTGCATTATAATCTTAACTGAAAGCATTATGTTTCATTATGGAAGTTCTTAATGTTAACATATAGGTGGATGCAACTTCCTTTGCATAATATTTGTAATACTTGAAGATTTGCTTTTGAGATTTTGTTTAAACATTCTGAGTACTTGTTTTGCATGGATTTCATATGATAGTTCGGTCCCGTATATGATCTTTGACATTATTTCCTAACTTTAAAGGAACCAGTATTACATAACAGAAGTATTTTCATAACAAAATAATAAATTTAACATGATACTGCTATTGTTAATCTATGCATCCCGTTGGCATAATCTCGTCCCCAAGTATTGCAATATTGGGAAAGAACTACCATGAATTGCCTAGGAGGGAAGAGGTAAACGTGGATTCTTTTTAGGCCATAAGTTCTAGCCAGGCCCGTCACCTTCAAATATTTTACCTTTTTTTCAGTGCCAATTAAAGAGTTAGGATAGGATATATCCACTTTGGAGAGAACCTTCCTAAACTGTTGACTTAAACGATTCTTTATCTAGGAAAGAATGATGCTATATTCTTGTCTTGTTGCTGTGCATTAAAACTGTCTCCAAATTTTCCTGGAAAATAATTGATTCTCTAAAGTATGTTTTATGCACTCAGTTCAGTTTGCTTGTTTGTTGAACATTGTCAAATTCCACAGATTCTCTTTTCCTTAGCATCACTATCCCACTAAGTTTTCTTGCACTTCTAATCAATCGTTAGCCTCTGTTCCCAAAGATGCCTAAGCTAAGCTCAGGACTTGGTGCCTGCCCCCCTTTTGACAATTGACAGAAACTTCTTCAGTCTTTCAACATATAATTTCTTTTCAGCTCTTAGGATAGAGTATGGGGAACTCCATACCTTTGCTTCAGGGTTCTTTGTTGAAACTTCATGAGTACCATAATTCATAGGTCCAAGGATCTTTGGATCTCGTTCTCCTTGTTCCTTTAAACAAAAATATTGTTTTTCTTTTTTGTTTGTGCAATGTTCTCAAACCTTTATCATGGTTCTCAGATGTTATTAAATTATTCAGCACGATCTAGATAGTTGGATTGGCTAAATCTTGGGAACTGCAGCTATTTGTATACGTTTTTGTGTATGCAATTGCTGTACTTTTTGCTTCTAGCAGGATGCTTATGCCGCTACTTAATATGTGTGCAGGCGAGAGCTCTCATAGCGAAACTAACAGAGGAAAAGAATAATGCCATGCAACAGTACAACAAACTTCGTCAGGAATTGGTAAGAAGAGGAATGATTTGACGAAGCTTCACTAGATGCAATTTTGCTCAAGAAGCTTCATATATGATTACATGGGAAACAACAACTTTACTTTTGAGATATACTTGCAAATACCTTTTGACTATTACGCAAATGAAAATATTTACTATAATATGTAACTTTCATTTTACGGTTGGAAATAAGATTATGATTCTCCTTTTCTGTGGAATATTAGACTATCAGGGCTACATTAGTTTCTTATGGTTGAGGTCTGCATTGTGCAGGAACTATTGAAGCATGATAGCAGGAAAAATGCAAGCGGCGTCTCCTTCCTGTTCGTCATATTTGTTGGATTGATTGGAATCGTCTTGGGCTATGCTTTTAAGAAGAATTGAGAATCTTTATGCAGCAAACTGGAATTTATATCATTATATTTTCTATGATGAAAGGGAAAAGGAACTACTAATGTTCAGTGGGTGGATCTGTAGCAAGTTTTAATTTGTTGAAGTAGCAAATTGTTAGGTGGTGTTCAAGAATTTGTAGTTGCTGAATTTGCAAGGTAGCACACACTCTTTCTGTAACTTAAAAGAGTTTTTTTTTCTTTCCTTTTTTTTCTTTTCCTTTCTATTTTTTTCTCCCTCAATCTCTCTCTTACCATCCATCTTGTTATATTTTGTGGAACTGTTGATTTAATAATTTTACATCTCCAATTGTTCAG GTGCGGCACGTGTTTTGCTTCTTCCTTCTCTTGTCTGCAGCACGTTCGCCATTGTTGCTCCTCTCTTTTCTCGATCTGTTCCCGTAACTTTCTCTCAAGCAAACTCATTTCCAGATTCTTTTTCTTCTATCCTCTCTTCAATTTCATCTTCTTCCCCTCCTTTTTTTTTAATCATTATTTTGTGATCCTGCTTCACTCTTCTCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGATAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGTGTTCGCCCAAACACTGGAATTGTCTCGCCACGGTCAACATGCGACGTTATAGTCACCATGCAAGCCCAGAAAGAGGCTCCTTCTGATATGCAATGCAAAGATAAATTCCTCCTTCAGAGTGTTAAAACAGTTGATGGCGCAACCGCAAAGGATATCAATGCAGAAATGTTCAACAAGGAGGCTGGGCATGTGGTCGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCCGAAGGTTCTGAAGAAGGTTCCTCCCCAAGAGGTTCTGTATCGGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAGCCCCAGGATAAATCTGCAGAGGCGAGAGCTCTCATAGCGAAACTAACAGAGGAAAAGAATAATGCCATGCAACAGTACAACAAACTTCGTCAGGAATTGGAACTATTGAAGCATGATAGCAGGAAAAATGCAAGCGGCGTCTCCTTCCTGTTCGTCATATTTGTTGGATTGATTGGAATCGTCTTGGGCTATGCTTTTAAGAAGAATTGAGAATCTTTATGCAGCAAACTGGAATTTATATCATTATATTTTCTATGATGAAAGGGAAAAGGAACTACTAATGTTCAGTGGGTGGATCTGTAGCAAGTTTTAATTTGTTGAAGTAGCAAATTGTTAGGTGGTGTTCAAGAATTTGTAGTTGCTGAATTTGCAAGGTAGCACACACTCTTTCTGTAACTTAAAAGAGTTTTTTTTTCTTTCCTTTTTTTTCTTTTCCTTTCTATTTTTTTCTCCCTCAATCTCTCTCTTACCATCCATCTTGTTATATTTTGTGGAACTGTTGATTTAATAATTTTACATCTCCAATTGTTCAG ATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGATAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGTGTTCGCCCAAACACTGGAATTGTCTCGCCACGGTCAACATGCGACGTTATAGTCACCATGCAAGCCCAGAAAGAGGCTCCTTCTGATATGCAATGCAAAGATAAATTCCTCCTTCAGAGTGTTAAAACAGTTGATGGCGCAACCGCAAAGGATATCAATGCAGAAATGTTCAACAAGGAGGCTGGGCATGTGGTCGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCCGAAGGTTCTGAAGAAGGTTCCTCCCCAAGAGGTTCTGTATCGGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAGCCCCAGGATAAATCTGCAGAGGCGAGAGCTCTCATAGCGAAACTAACAGAGGAAAAGAATAATGCCATGCAACAGTACAACAAACTTCGTCAGGAATTGGAACTATTGAAGCATGATAGCAGGAAAAATGCAAGCGGCGTCTCCTTCCTGTTCGTCATATTTGTTGGATTGATTGGAATCGTCTTGGGCTATGCTTTTAAGAAGAATTGA MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAPSDMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQYNKLRQELELLKHDSRKNASGVSFLFVIFVGLIGIVLGYAFKKN* Homology
BLAST of CSPI05G06790 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 3.2e-82 Identity = 157/239 (65.69%), Postives = 198/239 (82.85%), Query Frame = 0
BLAST of CSPI05G06790 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 1.2e-79 Identity = 156/242 (64.46%), Postives = 198/242 (81.82%), Query Frame = 0
BLAST of CSPI05G06790 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 3.7e-70 Identity = 144/242 (59.50%), Postives = 187/242 (77.27%), Query Frame = 0
BLAST of CSPI05G06790 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 7.8e-52 Identity = 100/154 (64.94%), Postives = 126/154 (81.82%), Query Frame = 0
BLAST of CSPI05G06790 vs. ExPASy Swiss-Prot
Match: O82213 (Vesicle-associated protein 3-1 OS=Arabidopsis thaliana OX=3702 GN=PVA31 PE=3 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.1e-42 Identity = 85/126 (67.46%), Postives = 102/126 (80.95%), Query Frame = 0
BLAST of CSPI05G06790 vs. ExPASy TrEMBL
Match: A0A0A0KMX3 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G161980 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 6.9e-128 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of CSPI05G06790 vs. ExPASy TrEMBL
Match: A0A5A7T8A8 (Vesicle-associated protein 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00430 PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 1.0e-123 Identity = 232/240 (96.67%), Postives = 237/240 (98.75%), Query Frame = 0
BLAST of CSPI05G06790 vs. ExPASy TrEMBL
Match: A0A1S3ATQ2 (vesicle-associated protein 1-2 OS=Cucumis melo OX=3656 GN=LOC103482614 PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 1.0e-123 Identity = 232/240 (96.67%), Postives = 237/240 (98.75%), Query Frame = 0
BLAST of CSPI05G06790 vs. ExPASy TrEMBL
Match: A0A6J1E2V8 (vesicle-associated protein 1-2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430328 PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 1.0e-115 Identity = 221/240 (92.08%), Postives = 225/240 (93.75%), Query Frame = 0
BLAST of CSPI05G06790 vs. ExPASy TrEMBL
Match: A0A6J1DN99 (vesicle-associated protein 1-2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021973 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115 Identity = 218/240 (90.83%), Postives = 228/240 (95.00%), Query Frame = 0
BLAST of CSPI05G06790 vs. NCBI nr
Match: XP_004152405.1 (vesicle-associated protein 1-2 [Cucumis sativus] >KGN50249.1 hypothetical protein Csa_000538 [Cucumis sativus]) HSP 1 Score: 466.5 bits (1199), Expect = 1.4e-127 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of CSPI05G06790 vs. NCBI nr
Match: XP_008437092.1 (PREDICTED: vesicle-associated protein 1-2 [Cucumis melo] >KAA0039712.1 vesicle-associated protein 1-2 [Cucumis melo var. makuwa]) HSP 1 Score: 452.6 bits (1163), Expect = 2.1e-123 Identity = 232/240 (96.67%), Postives = 237/240 (98.75%), Query Frame = 0
BLAST of CSPI05G06790 vs. NCBI nr
Match: XP_038874712.1 (vesicle-associated protein 1-2 [Benincasa hispida]) HSP 1 Score: 434.1 bits (1115), Expect = 7.9e-118 Identity = 226/240 (94.17%), Postives = 229/240 (95.42%), Query Frame = 0
BLAST of CSPI05G06790 vs. NCBI nr
Match: KAG7016892.1 (Vesicle-associated protein 1-2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 427.6 bits (1098), Expect = 7.4e-116 Identity = 222/240 (92.50%), Postives = 226/240 (94.17%), Query Frame = 0
BLAST of CSPI05G06790 vs. NCBI nr
Match: XP_022922307.1 (vesicle-associated protein 1-2-like isoform X1 [Cucurbita moschata] >XP_023550757.1 vesicle-associated protein 1-2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 426.0 bits (1094), Expect = 2.1e-115 Identity = 221/240 (92.08%), Postives = 225/240 (93.75%), Query Frame = 0
BLAST of CSPI05G06790 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 ) HSP 1 Score: 306.2 bits (783), Expect = 2.3e-83 Identity = 157/239 (65.69%), Postives = 198/239 (82.85%), Query Frame = 0
BLAST of CSPI05G06790 vs. TAIR 10
Match: AT3G60600.1 (vesicle associated protein ) HSP 1 Score: 297.7 bits (761), Expect = 8.2e-81 Identity = 156/242 (64.46%), Postives = 198/242 (81.82%), Query Frame = 0
BLAST of CSPI05G06790 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein ) HSP 1 Score: 266.2 bits (679), Expect = 2.6e-71 Identity = 144/242 (59.50%), Postives = 187/242 (77.27%), Query Frame = 0
BLAST of CSPI05G06790 vs. TAIR 10
Match: AT3G60600.3 (vesicle associated protein ) HSP 1 Score: 241.9 bits (616), Expect = 5.3e-64 Identity = 125/175 (71.43%), Postives = 143/175 (81.71%), Query Frame = 0
BLAST of CSPI05G06790 vs. TAIR 10
Match: AT3G60600.2 (vesicle associated protein ) HSP 1 Score: 240.7 bits (613), Expect = 1.2e-63 Identity = 119/154 (77.27%), Postives = 136/154 (88.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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