CSPI05G06780 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G06780
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	leukocyte receptor cluster member 1 homolog
Location	Chr5: 6068257 .. 6070729 (+)
RNA-Seq Expression	CSPI05G06780
Synteny	CSPI05G06780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGCAAAAAAGAAAAAAGTATCTTAGTCTTCCCCACGCCACGGCGCGCCTTTTCTCACCTTCTCCTCGCCCTTTCCCCTTAGCCTGTCCGCCAACGTCCAGGCTACCGCCGACGTCACTGCCGGTTAACGCTAGTATATGTTACAGCTTCAACACCGGAGCTCGAGCTTAGGTTTTTCATCTCTTCTGTTTCATTTTCTGATCTACGTTTCTTTTGTTTTAATTTTTTCGGCGTTGAATCGTTTTTTTCTTCCCCTTCTTTTGTTTTTTGTTGATTTGGTTTGGTTTAGATCTGTTTGGAATTTATGATTTCGAGATGGATTATGACGCCCACCCCAATTTCTCTATCCTTTCTAATCTGTTGCGGATGAACAACTTTCTCTTCTAATCTTGAAATTAAATTCGATTACGTGTTCCCTTGGAAACCCTAATTTTGTCTCTCGCTCTCGTTCCTTCGCCCTTTTTTACTTTCTGGGAATATCTGGAAGTTGCTTGGCGAATTTTTTTTTTCGTATGAAATTGTGTTAATTTGCCTTGTGCATCTAACTATTGTTCCCGGCACTTATTTTTAAATTGTTAGCCTGCAGGTGAATTATAATCTTAGTTTCTTAGATTTTGGTTGATATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGTTGGAATGTTTACAACTACGAAAACAGAGAGAAAGTGAAGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAAACGTGAGCAGGTTAGGAAACGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCAGTAATTGACACTTCAAAGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAATTAAGGGTTCAGACAATGGGGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAGGGTTATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAAATGCCATGGTACCTTGAGAGGCCCACCAAGGATGATGACACGGAGACTGGCGAAAATGATGGATCGTTGAGAGTAGGGAGTGGAAATGTAAAGAAGGGAGAAAAAAAGACATTGGAAGAATTGAGGGCTGAGCGTCTGAAACGAGAGCAGAAGGAGAAGGGAAGGGAGTGTGCTTTAATCGCAGAGAGAAGCCGGAAGAGTGGAATAGCTTCAAGGGAAGGAGATCCATCTTCCAGGAGGTAAGCATATATTAAGCTAACAACAATGTTCTTGTCATTGTTCTTTATTTTGGAGGGTCCATGTTACGTTATTTCTCAAGTCACATAAAAGTGTTCAAGGCGCTGAAAGGAAATAGCAAATGAGATGAGTAGAAAATAGTAGATACTATAACAAAGAAGGATTATTTGAAATAGTGATTCCTAGTTAACTTTAGGTTATAATAGTTGGACACATCAATTATTATATTTAGACCAGAGTATTTAACTTCTAATGGGATTCTAGAGTCTAATTGATATCAGATGATAGGGACTTAGAGAGCTAACCAGAAGTTCAATTCCACATGAGAACTAACTAGAAGTTCTGTTTCTTACATTCATCAAGAACAGTTAGATACGACAACGTAATATTCACTTTTCTGAAGTTCACAATTTTGTTGAATCATATTGTATCACTACATTTCATTCACCTAGCATTCTAGATTATTTAGGCCCTTTTGATGGGTTCTGCTACATGTGATTAATTTTAACATATAAACATGCTAGGAGAAGAAAAGCTTCATTGAATTGATTAAAGAGAAAAAAAACTAATTTTTATTTCAACTCCTTTCTATGCAGGTGGAAATCCAGAAGATAAAGACTCAGGTTTTCTGGATCACGAATGATTTTATCTTGGCTTTAGCTCAGTTTTTTAAGGAGGCCGACTTTCGGAATTTGCTCTCTTTCGAAATCTCAACAGGGTTGTTTTATGAACAAAGGCCTCCTGAATCTTGAAAAACTTGATCACACTGTGGCTGAAATTTATCTGGGCCATGTGAATTTTGTAGTTTGGAATTCACGTGGACAAGATTTGTGTACATATAAGGTAATGTTCATCATTGAGATACACCATATCAACTGTAATAGCGATCGTATCAAACTTGAAAACTTGACATGCAGCAAGATGCGGTTGGTACTTGTGACATTGTCGATGTTATTACAAGTCAATGTGATCAGTAGAACATGTGATTTGCCTTGTAAATAAGGCTATCAAATGTCCTAGCTAATTAAAATACAATTTGTTCAAATGACATAATTAAATGGTAAATTATCAC

mRNA sequence

CAAAAGCAAAAAAGAAAAAAGTATCTTAGTCTTCCCCACGCCACGGCGCGCCTTTTCTCACCTTCTCCTCGCCCTTTCCCCTTAGCCTGTCCGCCAACGTCCAGGCTACCGCCGACGTCACTGCCGGTTAACGCTAGTATATGTTACAGCTTCAACACCGGAGCTCGAGCTTAGCCTGCAGGTGAATTATAATCTTAGTTTCTTAGATTTTGGTTGATATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGTTGGAATGTTTACAACTACGAAAACAGAGAGAAAGTGAAGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAAACGTGAGCAGGTTAGGAAACGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCAGTAATTGACACTTCAAAGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAATTAAGGGTTCAGACAATGGGGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAGGGTTATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAAATGCCATGGTACCTTGAGAGGCCCACCAAGGATGATGACACGGAGACTGGCGAAAATGATGGATCGTTGAGAGTAGGGAGTGGAAATGTAAAGAAGGGAGAAAAAAAGACATTGGAAGAATTGAGGGCTGAGCGTCTGAAACGAGAGCAGAAGGAGAAGGGAAGGGAGTGTGCTTTAATCGCAGAGAGAAGCCGGAAGAGTGGAATAGCTTCAAGGGAAGGAGATCCATCTTCCAGGAGGTGGAAATCCAGAAGATAAAGACTCAGGTTTTCTGGATCACGAATGATTTTATCTTGGCTTTAGCTCAGTTTTTTAAGGAGGCCGACTTTCGGAATTTGCTCTCTTTCGAAATCTCAACAGGGTTGTTTTATGAACAAAGGCCTCCTGAATCTTGAAAAACTTGATCACACTGTGGCTGAAATTTATCTGGGCCATGTGAATTTTGTAGTTTGGAATTCACGTGGACAAGATTTGTGTACATATAAGGTAATGTTCATCATTGAGATACACCATATCAACTGTAATAGCGATCGTATCAAACTTGAAAACTTGACATGCAGCAAGATGCGGTTGGTACTTGTGACATTGTCGATGTTATTACAAGTCAATGTGATCAGTAGAACATGTGATTTGCCTTGTAAATAAGGCTATCAAATGTCCTAGCTAATTAAAATACAATTTGTTCAAATGACATAATTAAATGGTAAATTATCAC

Coding sequence (CDS)

ATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGTTGGAATGTTTACAACTACGAAAACAGAGAGAAAGTGAAGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAAACGTGAGCAGGTTAGGAAACGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCAGTAATTGACACTTCAAAGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAATTAAGGGTTCAGACAATGGGGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAGGGTTATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAAATGCCATGGTACCTTGAGAGGCCCACCAAGGATGATGACACGGAGACTGGCGAAAATGATGGATCGTTGAGAGTAGGGAGTGGAAATGTAAAGAAGGGAGAAAAAAAGACATTGGAAGAATTGAGGGCTGAGCGTCTGAAACGAGAGCAGAAGGAGAAGGGAAGGGAGTGTGCTTTAATCGCAGAGAGAAGCCGGAAGAGTGGAATAGCTTCAAGGGAAGGAGATCCATCTTCCAGGAGGTGGAAATCCAGAAGATAA

Protein sequence

MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVITPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEELRAERLKREQKEKGRECALIAERSRKSGIASREGDPSSRRWKSRR*

Homology

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BLAST of CSPI05G06780 vs. ExPASy Swiss-Prot
Match: Q9DB98 (Leukocyte receptor cluster member 1 homolog OS=Mus musculus OX=10090 GN=Leng1 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06
Identity = 70/253 (27.67%), Postives = 110/253 (43.48%), Query Frame = 0


Query: 7   LNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLR---TARGLA 66
           +NILP+K W+V N +N  +V+RDE  A +EE+ +  +V     E R E LR     R   
Sbjct: 1   MNILPKKSWHVRNKDNVARVRRDEAQAREEEKERERRVLLAQQEARTEFLRKKARQRNSV 60

Query: 67  PVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMK-KEEVEKRVITP 126
           P ++ + P       G ++LF   ++ +  KG   G  E   +K+R K ++E    ++T 
Sbjct: 61  PELEAADPGAP--SSGPVDLFR--ELLEERKGVPRGNKEHEEEKRREKERQEKALGILT- 120

Query: 127 EDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETG-------------------------- 186
                 LG   A    + PWY   P + D    G                          
Sbjct: 121 -----YLGQSAAEAQTQPPWYQLPPGQKDCCPPGPSPDEKIKNRLDPLKEMQKHLAKKRH 180

Query: 187 --ENDGSLRVGSGNVKKGEKKTLEELRAERLKREQKEKGRECALIA----ERSRKSGIAS 224
             E+  S        +  E  +LE+LRAERL+RE  E+ R  AL+A    + S++  + +
Sbjct: 181 SSESRPSREERPQKQRPREPPSLEKLRAERLQREAAERARAEALLARVQGQVSQQGQVEA 240

[Close]

BLAST of CSPI05G06780 vs. ExPASy Swiss-Prot
Match: Q96BZ8 (Leukocyte receptor cluster member 1 OS=Homo sapiens OX=9606 GN=LENG1 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.5e-06
Identity = 72/252 (28.57%), Postives = 111/252 (44.05%), Query Frame = 0


Query: 7   LNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTARGLAPVI 66
           +NILP+K W+V N +N  +V+RDE  A +EE+ +  +V     E R E LR        +
Sbjct: 1   MNILPKKSWHVRNKDNVARVRRDEAQAREEEKERERRVLLAQQEARTEFLRKKARHQNSL 60

Query: 67  DTSKPVETDLK-PGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKR--VITPE 126
              +  E      G ++LF   ++ +  KG   G  ++  ++KR +KE  EK   ++T  
Sbjct: 61  PELEAAEAGAPGSGPVDLFR--ELLEEGKGVIRGN-KEYEEEKRQEKERQEKALGILT-- 120

Query: 127 DEKYKLGYGVAGKGVKMPWYL---------ERPTKDDDTET------------------G 186
                LG   A    + PWY            P  D+  ++                  G
Sbjct: 121 ----YLGQSAAEAQTQPPWYQLPPGRGGPPPGPAPDEKIKSRLDPLREMQKHLGKKRQHG 180

Query: 187 ENDGSL----RVGSGNVKKGEKKTLEELRAERLKREQKEKGRECALIAERSRKSGIASRE 225
            ++GS     + GS   +  E  +L++LRAERL+RE  E+ R  AL+A   R  G A +E
Sbjct: 181 GDEGSRSRKEKEGSEKQRPKEPPSLDQLRAERLRREAAERSRAEALLA---RVQGRALQE 240

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BLAST of CSPI05G06780 vs. ExPASy Swiss-Prot
Match: Q3T0Z5 (Leukocyte receptor cluster member 1 homolog OS=Bos taurus OX=9913 GN=LENG1 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.4e-04
Identity = 71/254 (27.95%), Postives = 112/254 (44.09%), Query Frame = 0


Query: 7   LNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTA---RGLA 66
           +NILP+K W+V N +N  +V+RDE  A +EE+ +  +V     E R E LR     +   
Sbjct: 1   MNILPKKSWHVRNKDNVARVRRDEARAREEEKERERRVLLAQQEARTEFLRKKARHQNWL 60

Query: 67  PVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKR--VIT 126
           P ++ ++        G ++LF   ++ +  K    G  ++  ++KR +KE  EK   ++T
Sbjct: 61  PALEAAE-AGAPGSSGPVDLFR--ELLEEGKAVTKGN-KEYEEEKRQEKERQEKALGILT 120

Query: 127 PEDEKYKLGYGVAGKGVKMPWYLERPTK-----------------DDDTETGENDGSLRV 186
                  LG   A    + PWY   P +                 D   E  ++ G  R 
Sbjct: 121 ------YLGQSAAEAQTQPPWYQLPPRQGGPASGPGPDERIKSRLDPLREMQKHLGKKRK 180

Query: 187 GSGN-------VKKGEKK-------TLEELRAERLKREQKEKGRECALIAERSRKSGIAS 225
            SG+        K   +K       +LE+LRA+RL+RE  E+ R  AL+A   R  G A+
Sbjct: 181 HSGDSGGHSTKEKAAPEKQRPKGPPSLEQLRADRLRREAAERARAEALLA---RVGGTAA 240

[Close]

BLAST of CSPI05G06780 vs. ExPASy TrEMBL
Match: A0A0A0KKV3 (Cir_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G161970 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.9e-116
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRECALIAERSRKSGIASREGDPSSRRWKSRR 225
           RAERLKREQKEKGRE ALIAERSRKSGIASREGDPSSRRWKSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRWKSRR 224

[Close]

BLAST of CSPI05G06780 vs. ExPASy TrEMBL
Match: A0A1S3AT65 (leukocyte receptor cluster member 1 homolog OS=Cucumis melo OX=3656 GN=LOC103482616 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.2e-111
Identity = 216/224 (96.43%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEK+VI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKKVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERP+K DDTETGENDGS RVG+GNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPSK-DDTETGENDGSSRVGNGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRECALIAERSRKSGIASREGDPSSRRWKSRR 225
           RAERLKREQKEKGRE ALIAERSRKSGIASREGD SSRRWKSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDSSSRRWKSRR 223

[Close]

BLAST of CSPI05G06780 vs. ExPASy TrEMBL
Match: A0A5A7TDI4 (Leukocyte receptor cluster member 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00420 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 5.7e-108
Identity = 211/219 (96.35%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEK+VI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKKVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERP+K DDTETGENDGS RVG+GNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPSK-DDTETGENDGSSRVGNGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRECALIAERSRKSGIASREGDPSSRR 220
           RAERLKREQKEKGRE ALIAERSRKSGIASREGD SSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDSSSRR 218

[Close]

BLAST of CSPI05G06780 vs. ExPASy TrEMBL
Match: A0A6J1I3I0 (leukocyte receptor cluster member 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468837 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.8e-96
Identity = 194/224 (86.61%), Postives = 204/224 (91.07%), Query Frame = 0


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQSRKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           G+APVIDT+KPVETDLKPGH+NLFEGIKIFDP+K S+N G EDGSKKKRMKKEEVEKRVI
Sbjct: 61  GIAPVIDTTKPVETDLKPGHLNLFEGIKIFDPVKSSENEGGEDGSKKKRMKKEEVEKRVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           T EDEKYKLGYGVAGKGVK+PWYLER +K DD E+ +N  S RV S NVKKG KKTLEEL
Sbjct: 121 TAEDEKYKLGYGVAGKGVKLPWYLERRSK-DDAESDQNASSSRVVSENVKKGGKKTLEEL 180

Query: 181 RAERLKREQKEKGRECALIAERSRKSGIASREGDPSSRRWKSRR 225
           RAERLKREQKEKGRE ALIAERS KSG ASRE D SSRRWKSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSGKSGTASRERDSSSRRWKSRR 223

[Close]

BLAST of CSPI05G06780 vs. ExPASy TrEMBL
Match: A0A6J1E3T1 (leukocyte receptor cluster member 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111430330 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 5.0e-96
Identity = 192/224 (85.71%), Postives = 204/224 (91.07%), Query Frame = 0


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQSRKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           G+APVIDT+KPVETDLKPGH+NLFEGIKIFDP+K S+N G EDGSKKKRMK+EEVEKRVI
Sbjct: 61  GIAPVIDTTKPVETDLKPGHLNLFEGIKIFDPVKSSENEGGEDGSKKKRMKREEVEKRVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           T EDEKYKLGYGVAGKGVK+PWYLER +K DD E+ +ND S RV S N+KKG KKTLEEL
Sbjct: 121 TAEDEKYKLGYGVAGKGVKLPWYLERRSK-DDAESDQNDSSPRVVSENIKKGGKKTLEEL 180

Query: 181 RAERLKREQKEKGRECALIAERSRKSGIASREGDPSSRRWKSRR 225
           RAERLKREQKEKGRE ALIAERS KSG  SRE D SSRRWKSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSGKSGTTSRERDSSSRRWKSRR 223

[Close]

BLAST of CSPI05G06780 vs. NCBI nr
Match: XP_004152406.1 (leukocyte receptor cluster member 1 homolog [Cucumis sativus] >XP_011654797.1 leukocyte receptor cluster member 1 homolog [Cucumis sativus] >KGN50248.1 hypothetical protein Csa_000654 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 4.0e-116
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRECALIAERSRKSGIASREGDPSSRRWKSRR 225
           RAERLKREQKEKGRE ALIAERSRKSGIASREGDPSSRRWKSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDPSSRRWKSRR 224

[Close]

BLAST of CSPI05G06780 vs. NCBI nr
Match: XP_008437093.1 (PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo] >XP_008437094.1 PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo] >XP_008437095.1 PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo])

HSP 1 Score: 410.6 bits (1054), Expect = 8.7e-111
Identity = 216/224 (96.43%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEK+VI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKKVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERP+K DDTETGENDGS RVG+GNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPSK-DDTETGENDGSSRVGNGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRECALIAERSRKSGIASREGDPSSRRWKSRR 225
           RAERLKREQKEKGRE ALIAERSRKSGIASREGD SSRRWKSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDSSSRRWKSRR 223

[Close]

BLAST of CSPI05G06780 vs. NCBI nr
Match: KAA0039711.1 (leukocyte receptor cluster member 1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 400.2 bits (1027), Expect = 1.2e-107
Identity = 211/219 (96.35%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQARKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEK+VI
Sbjct: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKKVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVKMPWYLERP+K DDTETGENDGS RVG+GNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPSK-DDTETGENDGSSRVGNGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRECALIAERSRKSGIASREGDPSSRR 220
           RAERLKREQKEKGRE ALIAERSRKSGIASREGD SSRR
Sbjct: 181 RAERLKREQKEKGRERALIAERSRKSGIASREGDSSSRR 218

[Close]

BLAST of CSPI05G06780 vs. NCBI nr
Match: XP_038874710.1 (leukocyte receptor cluster member 1 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102
Identity = 203/224 (90.62%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 1   MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTAR 60

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLA VIDT+KPVETDLKPGHINLFEGIKIFDP+KGS+NGGVEDGSK+KRMKKEEVEK+VI
Sbjct: 61  GLAAVIDTAKPVETDLKPGHINLFEGIKIFDPVKGSENGGVEDGSKRKRMKKEEVEKKVI 120

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVK+PWYLERP K DD E+ ENDGS RVGSGNVKKGEKKTLEEL
Sbjct: 121 TPEDEKYKLGYGVAGKGVKLPWYLERPGK-DDAESDENDGSSRVGSGNVKKGEKKTLEEL 180

Query: 181 RAERLKREQKEKGRECALIAERSRKSGIASREGDPSSRRWKSRR 225
           RAERLKREQKEKGRE ALIA   RKSG ASREGD SSRRWKSRR
Sbjct: 181 RAERLKREQKEKGRERALIA--GRKSGTASREGDSSSRRWKSRR 221

[Close]

BLAST of CSPI05G06780 vs. NCBI nr
Match: XP_038874709.1 (leukocyte receptor cluster member 1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102
Identity = 203/224 (90.62%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQ RKRDAEFRLEQLRTAR
Sbjct: 69  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTAR 128

Query: 61  GLAPVIDTSKPVETDLKPGHINLFEGIKIFDPIKGSDNGGVEDGSKKKRMKKEEVEKRVI 120
           GLA VIDT+KPVETDLKPGHINLFEGIKIFDP+KGS+NGGVEDGSK+KRMKKEEVEK+VI
Sbjct: 129 GLAAVIDTAKPVETDLKPGHINLFEGIKIFDPVKGSENGGVEDGSKRKRMKKEEVEKKVI 188

Query: 121 TPEDEKYKLGYGVAGKGVKMPWYLERPTKDDDTETGENDGSLRVGSGNVKKGEKKTLEEL 180
           TPEDEKYKLGYGVAGKGVK+PWYLERP K DD E+ ENDGS RVGSGNVKKGEKKTLEEL
Sbjct: 189 TPEDEKYKLGYGVAGKGVKLPWYLERPGK-DDAESDENDGSSRVGSGNVKKGEKKTLEEL 248

Query: 181 RAERLKREQKEKGRECALIAERSRKSGIASREGDPSSRRWKSRR 225
           RAERLKREQKEKGRE ALIA   RKSG ASREGD SSRRWKSRR
Sbjct: 249 RAERLKREQKEKGRERALIA--GRKSGTASREGDSSSRRWKSRR 289

[Close]

BLAST of CSPI05G06780 vs. TAIR 10
Match: AT4G16530.1 (Family of unknown function (DUF577) )

HSP 1 Score: 200.3 bits (508), Expect = 1.7e-51
Identity = 124/250 (49.60%), Postives = 159/250 (63.60%), Query Frame = 0


Query: 1   MGGHGGLNILPQKRWNVYNYENREKVKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTAR 60
           MGGHGGLNILPQKRWNVYN++NREKV+++EEAAA+EEQ+KRE+ RKRDAE RLE LR  R
Sbjct: 552 MGGHGGLNILPQKRWNVYNFDNREKVRKEEEAAAREEQIKREEARKRDAESRLEVLRNVR 611

Query: 61  GLAPVIDTSKPVE-------------------------TDLKPGHINLFEGIKIFDP--I 120
           GLAP+   S   E                          + K GHINLFEGI+IFDP  I
Sbjct: 612 GLAPLKRASPEAEKGKDEAVVAAAVVKSTAVVVESVESEEPKTGHINLFEGIRIFDPIEI 671

Query: 121 KGSDNGGVEDGSKKKRMKKE----------EVEKRVITPEDEKYKLGYGVAGKGVKMPWY 180
           K +D    E+  ++K+M+KE          +   R   P++EKY+LGYGVAGKGVK PWY
Sbjct: 672 KKNDKPADEEDQRRKKMRKEAAATARASAKDAAARAGDPDEEKYRLGYGVAGKGVKRPWY 731

Query: 181 LERPTKDDDTETGEND--GSLRVGSGNVKKGEKKTLEELRAERLKREQKEKGRECALIAE 212
           LE+   ++D+  GE+D  G     +   K   KK+L+ELR ERLKRE+ EK RE AL  +
Sbjct: 732 LEKRNDENDSVRGEDDDGGCGGYEAKKKKMSGKKSLKELREERLKRERVEKERERALFMK 791

[Close]

BLAST of CSPI05G06780 vs. TAIR 10
Match: AT2G03010.1 (Family of unknown function (DUF577) )

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07
Identity = 43/103 (41.75%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 26  VKRDEEAAAKEEQLKREQVRKRDAEFRLEQLRTARGLAPVIDTSKPVETDLKPGHINLFE 85
           V++DEEAAA+EEQ+KRE  RKRDAE RLE LR  RGLAP+    + V       +     
Sbjct: 256 VRKDEEAAAREEQIKREDARKRDAESRLEVLRNVRGLAPLTGGREGVLEKRNDEN----- 315

Query: 86  GIKIFDPIKGSDN----GGVEDGSKK-------KRMKKEEVEK 118
                D ++G  +    GG E   KK       K +K+E VEK
Sbjct: 316 -----DSVRGEGDDGGCGGYEAKKKKMSGKKSLKELKRERVEK 348

The following BLAST results are available for this feature:

BLAST of CSPI05G06780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9DB98	1.2e-06	27.67	Leukocyte receptor cluster member 1 homolog OS=Mus musculus OX=10090 GN=Leng1 PE...	[more]
Q96BZ8	3.5e-06	28.57	Leukocyte receptor cluster member 1 OS=Homo sapiens OX=9606 GN=LENG1 PE=1 SV=1	[more]
Q3T0Z5	7.4e-04	27.95	Leukocyte receptor cluster member 1 homolog OS=Bos taurus OX=9913 GN=LENG1 PE=2 ...	[more]

BLAST of CSPI05G06780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKV3	1.9e-116	99.55	Cir_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G161970 PE=4 ...	[more]
A0A1S3AT65	4.2e-111	96.43	leukocyte receptor cluster member 1 homolog OS=Cucumis melo OX=3656 GN=LOC103482...	[more]
A0A5A7TDI4	5.7e-108	96.35	Leukocyte receptor cluster member 1-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1I3I0	3.8e-96	86.61	leukocyte receptor cluster member 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1E3T1	5.0e-96	85.71	leukocyte receptor cluster member 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of CSPI05G06780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152406.1	4.0e-116	99.55	leukocyte receptor cluster member 1 homolog [Cucumis sativus] >XP_011654797.1 le...	[more]
XP_008437093.1	8.7e-111	96.43	PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo] >XP_008437...	[more]
KAA0039711.1	1.2e-107	96.35	leukocyte receptor cluster member 1-like protein [Cucumis melo var. makuwa]	[more]
XP_038874710.1	1.5e-102	90.63	leukocyte receptor cluster member 1 homolog isoform X2 [Benincasa hispida]	[more]
XP_038874709.1	1.5e-102	90.63	leukocyte receptor cluster member 1 homolog isoform X1 [Benincasa hispida]	[more]

BLAST of CSPI05G06780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16530.1	1.7e-51	49.60	Family of unknown function (DUF577)	[more]
AT2G03010.1	2.5e-07	41.75	Family of unknown function (DUF577)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..59
None	No IPR available	COILS	Coil	Coil	coord: 170..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..224
None	No IPR available	PANTHER	PTHR31861:SF15	OS10G0507500 PROTEIN	coord: 1..208
None	No IPR available	PANTHER	PTHR31861	OS10G0507500 PROTEIN	coord: 1..208
IPR019339	CBF1-interacting co-repressor CIR, N-terminal domain	SMART	SM01083	Cir_N_3	coord: 14..50 e-value: 8.6E-4 score: 28.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G06780.1	CSPI05G06780.1	mRNA
CSPI05G06780.2	CSPI05G06780.2	mRNA