CSPI05G06540 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G06540
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	YABBY protein
Location	Chr5: 5854766 .. 5857251 (-)
RNA-Seq Expression	CSPI05G06540
Synteny	CSPI05G06540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATTCAAAAACTCATTATCAAAGAGAAAAAGAAAAGGCAGATCCAAGGAAGGTGGTTAATCTGTCAATCCCATCAATCAGTCACTACCAATCATCAATCAATTTTTTGTAAAAGCAAACATTTCAATTTTACAATAATTCCCTCTTCTTCTTTTTCTTCTTGGATATGTCATCATCTTCTTGCTCATCTTCTTCTCCTACTTCGACTACAACTACTGCTACCACTACGACTACTACGACTACGACTACGTTATTGTCTCAACAACAACAGCTGCTGGACCACCACCTTCCTTCTTCACCTGAGCAGCTATGTTATGTCCATTGCAACATTTGTGACACTGTCCTTGCGGTATGTGTGTGTGTATATATATATATGCTAAAAATTTTATAATAAAGTTTCTTCCTTTCGTTTTATTTTTTCTGTTATAAAGTTCTGATCTTTTGTGTTTATTTTTCTTTTAAACGGGGTTTGGTTAATTTTTTTTTTGTTTTTGTGTTTTTCAGGTTAGTGTTCCTTGTTGTAGTTTGTTTAAAACTGTGACAGTGAGATGTGGACATTGCACTAATCTGTTGCCAGTCAACATGCGTGGCCTTCTTTTGCCTTCACCTAATCAATTTCATCAGCTTGGCCATTCTTTCTTTTCTCCTTCTCATAACATTCTCGTAATTAATTTATAATTCTTTTTTCCCTTTCTAATTTCATCTTTTATCTTATAATGTTTGATTATTAATTGTGTGTTATATTTTGACAAAAAGGAAAATATGGCTACACCAAATTCTAATTATCTGATCAACCAATTTGGAGCTACTACTAACAATTTTGGTATGCCATCTCGAGGAGTTACTGATGAGCTCCCTAGGCCACCCGTCGTCAACAGACGTGAGATTCATTTATTGATTTTAATTAAACTCTTATATTCACTAATAACAAAAGGAAAAAAAAAGGCCAATTTTTTTTAAGCATGTTCTTTTCAATATATAAATCTTGGCTAGATCTTGTTCAAGTACTTTTTTGTATTAAAGCTGAGATGAATAAAAGTTTTTAAATAGCTTTAAAAATATATATATATTTTATGAATATTAATGAATAATAATGTAGGGTACGTATGAAGCCTGCAGATAATGTTAATTTTAGGAAAAGAGAGATATATATTTTGTTGTGTAGGTGGGATAGGGTAGGAAGCTAGGTTTTCCTTGAGCAGAGAGATGAAAACACACACACACACACACACATATATATAAAAGATAATTGTTAATATTTGATATTATGTTTTTGTATGTAAATGTTATTTGAATAATATAATACATGAAATTAATGATTCAGCTCCTGAGAAGAGACAGAGAGTGCCATCTGCATACAACCGTTTCATCAAGTGAGTAATGATTCATTTTTTTATTATTATGATTATTATTTTTCAATTTCATATTTAGAAAGAGAGAGAGAAATTATATTAATCAATAGATGATGAAAATTAAAAAATTTATTTTGGATATGCAGGGATGAGATCCAACGCATTAAGTCTGTGAATCCCGATATATCCCATAGAGAAGCCTTCAGTGCCGCTGCTAAGAATGTAAAGCAACTCTTAACCCTAAACCAAATCTTAAAGAAAATTTCAAATAATCACTCTTCCCTAATCCATTTGGGATAAACTGTGATATTGTTCATATGGTTTAGGGTTTATTCATATTGTTGATCTGTAATTAACTTAAATTAAATAAATGGTAATGGCAGTGGGCCCACTTTCCACACATTCACTTTGGTCTCATGCCCGACCAGACTGTGAAGAAGACAAATATCCGCCAGCAGGTAAACAAAACACATATTTATATATATATATATATACATTGTTTGCTTATTATTTATTCTAATTCTCCTTGTTTTTTGGAGGGAGAGAATGAATAGTAATAGTAATAGTAATACTGTAATAGTGTGTGTGTGTAATATATATATATGTGTGCGTAGAATAGAAAAATATATTATAATTGTTTGAACAGTAAAAAGAGGAAAAATAGTGATCGTTGTCCTTTTAATTAGGTGACTGTTTGTTTTTATATATATTTTTTGAATTTGTGTAGGAACAAGGAGATGCTCAGAATGTTCTGATGAAAGACAATGGATTTTATGCCTCAGCCAATGTTGGTGTCTCCCATTTCTAACTCAATTGTTGGTGGGGTTATTACTATTATTATTAATACATATGGGATATCATCATGTGTTGATATATTAATATATATCTTAAATACTCTCTCTAGCTACTAGTTCTAATTTAATTAAGTTTAGCTACCTTGTAATTTCCTTTTAATTTAAGGTTTATGTTAATTGTGAACTAGCTTAATTACTATGTATTTGGTTCACTAATATGACTGCTTAGATCAATGCATCTTTGTGTTGTGATGCTACTCAACTATTTTTCCTTTTTTTCTTCTCTTTGTGAATAATGTTTTTTTTTTATCATATATATATGAGGATTTATTTAGTTGT

mRNA sequence

ATTATTCAAAAACTCATTATCAAAGAGAAAAAGAAAAGGCAGATCCAAGGAAGGTGGTTAATCTGTCAATCCCATCAATCAGTCACTACCAATCATCAATCAATTTTTTGTAAAAGCAAACATTTCAATTTTACAATAATTCCCTCTTCTTCTTTTTCTTCTTGGATATGTCATCATCTTCTTGCTCATCTTCTTCTCCTACTTCGACTACAACTACTGCTACCACTACGACTACTACGACTACGACTACGTTATTGTCTCAACAACAACAGCTGCTGGACCACCACCTTCCTTCTTCACCTGAGCAGCTATGTTATGTCCATTGCAACATTTGTGACACTGTCCTTGCGGTTAGTGTTCCTTGTTGTAGTTTGTTTAAAACTGTGACAGTGAGATGTGGACATTGCACTAATCTGTTGCCAGTCAACATGCGTGGCCTTCTTTTGCCTTCACCTAATCAATTTCATCAGCTTGGCCATTCTTTCTTTTCTCCTTCTCATAACATTCTCGAAAATATGGCTACACCAAATTCTAATTATCTGATCAACCAATTTGGAGCTACTACTAACAATTTTGGTATGCCATCTCGAGGAGTTACTGATGAGCTCCCTAGGCCACCCGTCGTCAACAGACCTCCTGAGAAGAGACAGAGAGTGCCATCTGCATACAACCGTTTCATCAAGGATGAGATCCAACGCATTAAGTCTGTGAATCCCGATATATCCCATAGAGAAGCCTTCAGTGCCGCTGCTAAGAATTGGGCCCACTTTCCACACATTCACTTTGGTCTCATGCCCGACCAGACTGTGAAGAAGACAAATATCCGCCAGCAGGAACAAGGAGATGCTCAGAATGTTCTGATGAAAGACAATGGATTTTATGCCTCAGCCAATGTTGGTGTCTCCCATTTCTAACTCAATTGTTGGTGGGGTTATTACTATTATTATTAATACATATGGGATATCATCATGTGTTGATATATTAATATATATCTTAAATACTCTCTCTAGCTACTAGTTCTAATTTAATTAAGTTTAGCTACCTTGTAATTTCCTTTTAATTTAAGGTTTATGTTAATTGTGAACTAGCTTAATTACTATGTATTTGGTTCACTAATATGACTGCTTAGATCAATGCATCTTTGTGTTGTGATGCTACTCAACTATTTTTCCTTTTTTTCTTCTCTTTGTGAATAATGTTTTTTTTTTATCATATATATATGAGGATTTATTTAGTTGT

Coding sequence (CDS)

ATGTCATCATCTTCTTGCTCATCTTCTTCTCCTACTTCGACTACAACTACTGCTACCACTACGACTACTACGACTACGACTACGTTATTGTCTCAACAACAACAGCTGCTGGACCACCACCTTCCTTCTTCACCTGAGCAGCTATGTTATGTCCATTGCAACATTTGTGACACTGTCCTTGCGGTTAGTGTTCCTTGTTGTAGTTTGTTTAAAACTGTGACAGTGAGATGTGGACATTGCACTAATCTGTTGCCAGTCAACATGCGTGGCCTTCTTTTGCCTTCACCTAATCAATTTCATCAGCTTGGCCATTCTTTCTTTTCTCCTTCTCATAACATTCTCGAAAATATGGCTACACCAAATTCTAATTATCTGATCAACCAATTTGGAGCTACTACTAACAATTTTGGTATGCCATCTCGAGGAGTTACTGATGAGCTCCCTAGGCCACCCGTCGTCAACAGACCTCCTGAGAAGAGACAGAGAGTGCCATCTGCATACAACCGTTTCATCAAGGATGAGATCCAACGCATTAAGTCTGTGAATCCCGATATATCCCATAGAGAAGCCTTCAGTGCCGCTGCTAAGAATTGGGCCCACTTTCCACACATTCACTTTGGTCTCATGCCCGACCAGACTGTGAAGAAGACAAATATCCGCCAGCAGGAACAAGGAGATGCTCAGAATGTTCTGATGAAAGACAATGGATTTTATGCCTCAGCCAATGTTGGTGTCTCCCATTTCTAA

Protein sequence

MSSSSCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATPNSNYLINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYASANVGVSHF*

Homology

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BLAST of CSPI05G06540 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.1e-60
Identity = 135/219 (61.64%), Postives = 159/219 (72.60%), Query Frame = 0


Query: 38  DHHLPSSPEQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPN 97
           DH  PS  + LCYV CN C T+LAV+VP  SLFKTVTVRCG CTNLL VNMR  +LP+ N
Sbjct: 17  DHFSPS--DHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASN 76

Query: 98  QFH-QLG-HSFFSPSHNILENMATPNSN---YLINQFGATTNNFGMPSRGVTDELPRPPV 157
           Q   QLG HS+F+P  +ILE +    SN    ++NQ     +           E+P+ P 
Sbjct: 77  QLQLQLGPHSYFNP-QDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPP 136

Query: 158 VNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPD- 217
           VNRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKNWAHFPHIHFGL+PD 
Sbjct: 137 VNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDN 196

Query: 218 QTVKKTNIRQQEQGDAQNVLMKDNGFY--ASANVGVSHF 249
           Q VKKTN+ QQE  D  N++MK+ GFY  A+ANVGV+ +
Sbjct: 197 QPVKKTNMPQQEGED--NMVMKE-GFYAPAAANVGVTPY 229

[Close]

BLAST of CSPI05G06540 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.1e-60
Identity = 134/226 (59.29%), Postives = 152/226 (67.26%), Query Frame = 0


Query: 43  SSPEQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLL--PVNMRGLLLPSPNQFH 102
           SS +QLCYVHC+ CDTVLAVSVP  SLFKTVTVRCGHC+NLL   V+MR LLLPS +   
Sbjct: 20  SSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVS--- 79

Query: 103 QLGHSFF-----SPSHNILENMATPNSNYLINQFGATTNNFGMPSRGVT----------- 162
            LGHSF       P  N+LE M +   N  +N   +   +   P+  +            
Sbjct: 80  NLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDH 139

Query: 163 -DELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPH 222
             E+PRPP  NRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKNWAHFPH
Sbjct: 140 LQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPH 199

Query: 223 IHFGLMPDQ-TVKKTNIRQQEQGDAQNVLMKDNGFYAS-ANVGVSH 248
           IHFGLM D    KK N+RQQE  D    +M   GFY S ANVGV+H
Sbjct: 200 IHFGLMADHPPTKKANVRQQEGEDG---MMGREGFYGSAANVGVAH 239

[Close]

BLAST of CSPI05G06540 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.0e-59
Identity = 138/248 (55.65%), Postives = 164/248 (66.13%), Query Frame = 0


Query: 37  LDH-HLPSSPEQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPS 96
           LDH   PS  EQLCYVHCN CDT+LAV VPC SLFKTVTVRCGHC NLL VN+RGLLLP+
Sbjct: 13  LDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPA 72

Query: 97  P-----NQFHQLGHSFFSPS--HNILENMATPNSNYLINQFGA--------------TTN 156
           P     NQ H  G S  SP+  H +L+ +A    + L+ Q  +               +N
Sbjct: 73  PAPAPANQLH-FGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASN 132

Query: 157 NFGM---PSRGVTD--ELPR--PPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISH 216
              M   P++ V    ELP+  P   NRPPEKRQRVPSAYNRFIKDEIQRIK+ NPDISH
Sbjct: 133 APAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISH 192

Query: 217 REAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGF-------YAS 249
           REAFSAAAKNWAHFPHIHFGLMPDQ  KKT    + Q  ++++L+KD+ +        A+
Sbjct: 193 REAFSAAAKNWAHFPHIHFGLMPDQGFKKT---FKPQDGSEDILLKDSLYAAAAAAAAAA 252

[Close]

BLAST of CSPI05G06540 vs. ExPASy Swiss-Prot
Match: Q6H668 (Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.0e-59
Identity = 138/248 (55.65%), Postives = 164/248 (66.13%), Query Frame = 0


Query: 37  LDH-HLPSSPEQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPS 96
           LDH   PS  EQLCYVHCN CDT+LAV VPC SLFKTVTVRCGHC NLL VN+RGLLLP+
Sbjct: 13  LDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPA 72

Query: 97  P-----NQFHQLGHSFFSPS--HNILENMATPNSNYLINQFGA--------------TTN 156
           P     NQ H  G S  SP+  H +L+ +A    + L+ Q  +               +N
Sbjct: 73  PAPAPANQLH-FGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASN 132

Query: 157 NFGM---PSRGVTD--ELPR--PPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISH 216
              M   P++ V    ELP+  P   NRPPEKRQRVPSAYNRFIKDEIQRIK+ NPDISH
Sbjct: 133 APAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISH 192

Query: 217 REAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGF-------YAS 249
           REAFSAAAKNWAHFPHIHFGLMPDQ  KKT    + Q  ++++L+KD+ +        A+
Sbjct: 193 REAFSAAAKNWAHFPHIHFGLMPDQGFKKT---FKPQDGSEDILLKDSLYAAAAAAAAAA 252

[Close]

BLAST of CSPI05G06540 vs. ExPASy Swiss-Prot
Match: Q01JG2 (Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 4.1e-56
Identity = 130/240 (54.17%), Postives = 154/240 (64.17%), Query Frame = 0


Query: 30  LSQQQQLLDHHLPSSPEQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLLPVNMR 89
           LSQ QQ     L +  EQLCYVHCN CDT+LAV VPC SLFKTVTVRCGHC NLL VN+R
Sbjct: 14  LSQHQQQQPPPL-AEQEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLR 73

Query: 90  GLLLP----SPNQFHQLGHSFFSPS--HNILENM-------------ATPNSNYLINQFG 149
           GLLLP    + NQ    G +  SP+  H +L+ +             A+PN + + +   
Sbjct: 74  GLLLPAAASTANQL-PFGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPNVSSITSSNS 133

Query: 150 ATTNN-----FGMPSRGVTDELPR----PPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSV 209
           +  NN         +   T   P+     P  NR  EKRQRVPSAYNRFIKDEIQRIK+ 
Sbjct: 134 SCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQRVPSAYNRFIKDEIQRIKAS 193

Query: 210 NPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYASA 242
           NPDI+HREAFSAAAKNWAHFPHIHFGLMPDQ +KKT I+ Q+ G  + +L KD G YA+A
Sbjct: 194 NPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTGIQSQD-GAGECMLFKD-GLYAAA 249

[Close]

BLAST of CSPI05G06540 vs. ExPASy TrEMBL
Match: A0A0A0KKT0 (Axial regulator YABBY1 OS=Cucumis sativus OX=3659 GN=Csa_5G160210 PE=3 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 4.6e-135
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MSSSSCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVL 60
           MSSSSCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVL
Sbjct: 1   MSSSSCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVL 60

Query: 61  AVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATP 120
           AVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATP
Sbjct: 61  AVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATP 120

Query: 121 NSNYLINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKS 180
           NSNYLINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKS
Sbjct: 121 NSNYLINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKS 180

Query: 181 VNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYAS 240
           VNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYAS
Sbjct: 181 VNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYAS 240

Query: 241 ANVGVSHF 249
           ANVGVSHF
Sbjct: 241 ANVGVSHF 248

[Close]

BLAST of CSPI05G06540 vs. ExPASy TrEMBL
Match: A0A6J1H326 (axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111459241 PE=3 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.7e-109
Identity = 213/248 (85.89%), Postives = 219/248 (88.31%), Query Frame = 0


Query: 5   SCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVLAVSV 64
           S SSSSPTS         +TTTTT   QQQQ LDHHLP SPEQLCYVHCNICDTVLAVSV
Sbjct: 2   SSSSSSPTS---------STTTTTQQQQQQQQLDHHLP-SPEQLCYVHCNICDTVLAVSV 61

Query: 65  PCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATPNSNY 124
           PC SLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSPSHNILEN+ TPNSNY
Sbjct: 62  PCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNY 121

Query: 125 LINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD 184
           LINQF A TN FGMPSRGV DELPRPPV+NRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD
Sbjct: 122 LINQF-AATNTFGMPSRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD 181

Query: 185 ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYASA--- 244
           ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE GD  +V+MKDNGFYA+A   
Sbjct: 182 ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE-GDHGSVVMKDNGFYAAAAAS 237

Query: 245 -NVGVSHF 249
            NVGVSHF
Sbjct: 242 PNVGVSHF 237

[Close]

BLAST of CSPI05G06540 vs. ExPASy TrEMBL
Match: A0A6J1K906 (axial regulator YABBY 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491215 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.7e-108
Identity = 211/244 (86.48%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 7   SSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVLAVSVPC 66
           SSSSPTS+TTT TTT            QQ LDHHLP SPEQLCYVHCNICDTVLAVSVPC
Sbjct: 3   SSSSPTSSTTTTTTT------------QQQLDHHLP-SPEQLCYVHCNICDTVLAVSVPC 62

Query: 67  CSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATPNSNYLI 126
            SLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSPSHNILEN+ TPNSNYLI
Sbjct: 63  SSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLI 122

Query: 127 NQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDIS 186
           NQF A TN FGMPSRGV DELPRPPV+NRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDIS
Sbjct: 123 NQF-AATNTFGMPSRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDIS 182

Query: 187 HREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYASA--NVG 246
           HREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE GD  +V+MKDNGFYA+A  NVG
Sbjct: 183 HREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE-GDHGSVVMKDNGFYAAASPNVG 231

Query: 247 VSHF 249
           VSHF
Sbjct: 243 VSHF 231

[Close]

BLAST of CSPI05G06540 vs. ExPASy TrEMBL
Match: A0A6J1DS48 (axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111023361 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.9e-107
Identity = 199/213 (93.43%), Postives = 204/213 (95.77%), Query Frame = 0


Query: 37  LDHHLPSSPEQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSP 96
           LDHHLP++ EQLCYVHCNICDTVLAVSVPC SLFKTVTVRCGHCTNLLPVNMRGLLLPS 
Sbjct: 24  LDHHLPAA-EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPST 83

Query: 97  NQFHQLGHSFFSP-SHNILENMATPNSNYLINQFGATTNNFGMPSRGVTDELPRPPVVNR 156
           NQFHQLGHSFFSP SHNILEN+ TPNSN+LINQF A TNNFGMPSRGVTDELPRPPV+NR
Sbjct: 84  NQFHQLGHSFFSPSSHNILENIPTPNSNFLINQF-AATNNFGMPSRGVTDELPRPPVINR 143

Query: 157 PPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVK 216
           PPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVK
Sbjct: 144 PPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVK 203

Query: 217 KTNIRQQEQGDAQNVLMKDNGFYASANVGVSHF 249
           KTNIRQQE GD QNVLMKDNGFYASANVGVSHF
Sbjct: 204 KTNIRQQE-GD-QNVLMKDNGFYASANVGVSHF 232

[Close]

BLAST of CSPI05G06540 vs. ExPASy TrEMBL
Match: A0A6J1I282 (axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111468943 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.2e-104
Identity = 211/249 (84.74%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 3   SSSCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVLAV 62
           SSS SSSSPTST T  TTTTTT +      QQQLLDHHLP++ EQLCYVHCNICDTVLAV
Sbjct: 2   SSSSSSSSPTSTATATTTTTTTLS------QQQLLDHHLPAAAEQLCYVHCNICDTVLAV 61

Query: 63  SVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATPNS 122
           SVPC SLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFH LGH     SHNILEN+ TPN 
Sbjct: 62  SVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHHLGH-----SHNILENIPTPNP 121

Query: 123 NYLINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVN 182
           NYLINQF A TNNFG PSRGV DELPRPPV+NRPPEKRQRVPSAYNRFIKDEIQRIKSVN
Sbjct: 122 NYLINQF-AATNNFGTPSRGVIDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVN 181

Query: 183 PDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDN-GFYAS- 242
           PDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE    Q+VLMKDN GFYAS 
Sbjct: 182 PDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE--GEQSVLMKDNGGFYASA 236

Query: 243 -ANVGVSHF 249
            ANVGVSHF
Sbjct: 242 AANVGVSHF 236

[Close]

BLAST of CSPI05G06540 vs. NCBI nr
Match: XP_004147586.1 (axial regulator YABBY 5 [Cucumis sativus] >KGN50218.1 hypothetical protein Csa_000089 [Cucumis sativus])

HSP 1 Score: 490.3 bits (1261), Expect = 9.5e-135
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MSSSSCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVL 60
           MSSSSCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVL
Sbjct: 1   MSSSSCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVL 60

Query: 61  AVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATP 120
           AVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATP
Sbjct: 61  AVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATP 120

Query: 121 NSNYLINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKS 180
           NSNYLINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKS
Sbjct: 121 NSNYLINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKS 180

Query: 181 VNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYAS 240
           VNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYAS
Sbjct: 181 VNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYAS 240

Query: 241 ANVGVSHF 249
           ANVGVSHF
Sbjct: 241 ANVGVSHF 248

[Close]

BLAST of CSPI05G06540 vs. NCBI nr
Match: XP_038906988.1 (axial regulator YABBY 5-like [Benincasa hispida])

HSP 1 Score: 441.4 bits (1134), Expect = 5.1e-120
Identity = 230/248 (92.74%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MSSSSCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVL 60
           MSSSS SSSSPTSTT   TTTT +       QQQQ LDHHLP SPEQLCYVHCNICDTVL
Sbjct: 1   MSSSSSSSSSPTSTT---TTTTLSQQHLQQQQQQQQLDHHLP-SPEQLCYVHCNICDTVL 60

Query: 61  AVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATP 120
           AVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATP
Sbjct: 61  AVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATP 120

Query: 121 NSNYLINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKS 180
           NSNYLINQFGATTNNFGMPSRGVTDELPRPPV+NRPPEKRQRVPSAYNRFIKDEIQRIKS
Sbjct: 121 NSNYLINQFGATTNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKS 180

Query: 181 VNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYAS 240
           VNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE GD QNVLMKDNGFYAS
Sbjct: 181 VNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE-GDTQNVLMKDNGFYAS 240

Query: 241 ANVGVSHF 249
           ANVGVSHF
Sbjct: 241 ANVGVSHF 243

[Close]

BLAST of CSPI05G06540 vs. NCBI nr
Match: XP_022957809.1 (axial regulator YABBY 5-like [Cucurbita moschata])

HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108
Identity = 213/248 (85.89%), Postives = 219/248 (88.31%), Query Frame = 0


Query: 5   SCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVLAVSV 64
           S SSSSPTS         +TTTTT   QQQQ LDHHLP SPEQLCYVHCNICDTVLAVSV
Sbjct: 2   SSSSSSPTS---------STTTTTQQQQQQQQLDHHLP-SPEQLCYVHCNICDTVLAVSV 61

Query: 65  PCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATPNSNY 124
           PC SLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSPSHNILEN+ TPNSNY
Sbjct: 62  PCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNY 121

Query: 125 LINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD 184
           LINQF A TN FGMPSRGV DELPRPPV+NRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD
Sbjct: 122 LINQF-AATNTFGMPSRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD 181

Query: 185 ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYASA--- 244
           ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE GD  +V+MKDNGFYA+A   
Sbjct: 182 ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE-GDHGSVVMKDNGFYAAAAAS 237

Query: 245 -NVGVSHF 249
            NVGVSHF
Sbjct: 242 PNVGVSHF 237

[Close]

BLAST of CSPI05G06540 vs. NCBI nr
Match: KAG7036137.1 (Axial regulator YABBY 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.1 bits (1032), Expect = 3.4e-108
Identity = 212/249 (85.14%), Postives = 219/249 (87.95%), Query Frame = 0


Query: 5   SCSSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVLAVSV 64
           S SSSSPTS         +TTTTT   QQQQ LDHHLP SPEQLCYVHCNICDTVLAVSV
Sbjct: 2   SSSSSSPTS---------STTTTTQQQQQQQQLDHHLP-SPEQLCYVHCNICDTVLAVSV 61

Query: 65  PCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATPNSNY 124
           PC SLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSPSHNILEN+ TPNSNY
Sbjct: 62  PCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNY 121

Query: 125 LINQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD 184
           LINQF A TN FGMP+RGV DELPRPPV+NRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD
Sbjct: 122 LINQF-AATNTFGMPTRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPD 181

Query: 185 ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYASA--- 244
           ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE GD  +V+MKDNGFYA+A   
Sbjct: 182 ISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE-GDHGSVVMKDNGFYAAAAAA 238

Query: 245 --NVGVSHF 249
             NVGVSHF
Sbjct: 242 SPNVGVSHF 238

[Close]

BLAST of CSPI05G06540 vs. NCBI nr
Match: XP_022995783.1 (axial regulator YABBY 1-like [Cucurbita maxima])

HSP 1 Score: 401.0 bits (1029), Expect = 7.6e-108
Identity = 211/244 (86.48%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 7   SSSSPTSTTTTATTTTTTTTTTLLSQQQQLLDHHLPSSPEQLCYVHCNICDTVLAVSVPC 66
           SSSSPTS+TTT TTT            QQ LDHHLP SPEQLCYVHCNICDTVLAVSVPC
Sbjct: 3   SSSSPTSSTTTTTTT------------QQQLDHHLP-SPEQLCYVHCNICDTVLAVSVPC 62

Query: 67  CSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATPNSNYLI 126
            SLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSPSHNILEN+ TPNSNYLI
Sbjct: 63  SSLFKTVTVRCGHCTNLLPVNMRGLLLPSANQFHQLGHSFFSPSHNILENIPTPNSNYLI 122

Query: 127 NQFGATTNNFGMPSRGVTDELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDIS 186
           NQF A TN FGMPSRGV DELPRPPV+NRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDIS
Sbjct: 123 NQF-AATNTFGMPSRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDIS 182

Query: 187 HREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEQGDAQNVLMKDNGFYASA--NVG 246
           HREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE GD  +V+MKDNGFYA+A  NVG
Sbjct: 183 HREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQE-GDHGSVVMKDNGFYAAASPNVG 231

Query: 247 VSHF 249
           VSHF
Sbjct: 243 VSHF 231

[Close]

BLAST of CSPI05G06540 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-61
Identity = 135/219 (61.64%), Postives = 159/219 (72.60%), Query Frame = 0


Query: 38  DHHLPSSPEQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPN 97
           DH  PS  + LCYV CN C T+LAV+VP  SLFKTVTVRCG CTNLL VNMR  +LP+ N
Sbjct: 17  DHFSPS--DHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASN 76

Query: 98  QFH-QLG-HSFFSPSHNILENMATPNSN---YLINQFGATTNNFGMPSRGVTDELPRPPV 157
           Q   QLG HS+F+P  +ILE +    SN    ++NQ     +           E+P+ P 
Sbjct: 77  QLQLQLGPHSYFNP-QDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPP 136

Query: 158 VNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPD- 217
           VNRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKNWAHFPHIHFGL+PD 
Sbjct: 137 VNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDN 196

Query: 218 QTVKKTNIRQQEQGDAQNVLMKDNGFY--ASANVGVSHF 249
           Q VKKTN+ QQE  D  N++MK+ GFY  A+ANVGV+ +
Sbjct: 197 QPVKKTNMPQQEGED--NMVMKE-GFYAPAAANVGVTPY 229

[Close]

BLAST of CSPI05G06540 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 232.3 bits (591), Expect = 4.4e-61
Identity = 134/226 (59.29%), Postives = 152/226 (67.26%), Query Frame = 0


Query: 43  SSPEQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLL--PVNMRGLLLPSPNQFH 102
           SS +QLCYVHC+ CDTVLAVSVP  SLFKTVTVRCGHC+NLL   V+MR LLLPS +   
Sbjct: 20  SSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVS--- 79

Query: 103 QLGHSFF-----SPSHNILENMATPNSNYLINQFGATTNNFGMPSRGVT----------- 162
            LGHSF       P  N+LE M +   N  +N   +   +   P+  +            
Sbjct: 80  NLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDH 139

Query: 163 -DELPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPH 222
             E+PRPP  NRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKNWAHFPH
Sbjct: 140 LQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPH 199

Query: 223 IHFGLMPDQ-TVKKTNIRQQEQGDAQNVLMKDNGFYAS-ANVGVSH 248
           IHFGLM D    KK N+RQQE  D    +M   GFY S ANVGV+H
Sbjct: 200 IHFGLMADHPPTKKANVRQQEGEDG---MMGREGFYGSAANVGVAH 239

[Close]

BLAST of CSPI05G06540 vs. TAIR 10
Match: AT4G00180.2 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-52
Identity = 121/214 (56.54%), Postives = 138/214 (64.49%), Query Frame = 0


Query: 55  ICDTVLAVSVPCCSLFKTVTVRCGHCTNLL--PVNMRGLLLPSPNQFHQLGHSFF----- 114
           +CD    VSVP  SLFKTVTVRCGHC+NLL   V+MR LLLPS +    LGHSF      
Sbjct: 1   MCDINWQVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVS---NLGHSFLPPPPP 60

Query: 115 SPSHNILENMATPNSNYLINQFGATTNNFGMPSRGVT------------DELPRPPVVNR 174
            P  N+LE M +   N  +N   +   +   P+  +              E+PRPP  NR
Sbjct: 61  PPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANR 120

Query: 175 PPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQ-TV 234
           PPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKNWAHFPHIHFGLM D    
Sbjct: 121 PPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPT 180

Query: 235 KKTNIRQQEQGDAQNVLMKDNGFYAS-ANVGVSH 248
           KK N+RQQE  D    +M   GFY S ANVGV+H
Sbjct: 181 KKANVRQQEGEDG---MMGREGFYGSAANVGVAH 208

[Close]

BLAST of CSPI05G06540 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 179.5 bits (454), Expect = 3.4e-45
Identity = 93/168 (55.36%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 46  EQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHS 105
           EQLCY+ CN C+ +LAV+VPC SLF  VTVRCGHCTNL  VNM                 
Sbjct: 9   EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAA--------------- 68

Query: 106 FFSPSHNILENMATPN---SNYLINQFGATT-NNFGMPSRGVTDELPRPPVVNRPPEKRQ 165
                   L++++ PN   +NY + ++G+++ ++  +PSR  T  +    +VNRPPEKRQ
Sbjct: 69  -------ALQSLSRPNFQATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQ 128

Query: 166 RVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLM 210
           RVPSAYN+FIK+EIQRIK+ NPDISHREAFS AAKNWAHFPHIHFGLM
Sbjct: 129 RVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM 154

[Close]

BLAST of CSPI05G06540 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 179.5 bits (454), Expect = 3.4e-45
Identity = 93/168 (55.36%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 46  EQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHS 105
           EQLCY+ CN C+ +LAV+VPC SLF  VTVRCGHCTNL  VNM                 
Sbjct: 9   EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAA--------------- 68

Query: 106 FFSPSHNILENMATPN---SNYLINQFGATT-NNFGMPSRGVTDELPRPPVVNRPPEKRQ 165
                   L++++ PN   +NY + ++G+++ ++  +PSR  T  +    +VNRPPEKRQ
Sbjct: 69  -------ALQSLSRPNFQATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQ 128

Query: 166 RVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLM 210
           RVPSAYN+FIK+EIQRIK+ NPDISHREAFS AAKNWAHFPHIHFGLM
Sbjct: 129 RVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM 154

The following BLAST results are available for this feature:

BLAST of CSPI05G06540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22152	2.1e-60	61.64	Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1	[more]
Q9XFB1	6.1e-60	59.29	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]
A2X7Q3	1.0e-59	55.65	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]
Q6H668	1.0e-59	55.65	Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1	[more]
Q01JG2	4.1e-56	54.17	Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2	[more]

BLAST of CSPI05G06540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKT0	4.6e-135	100.00	Axial regulator YABBY1 OS=Cucumis sativus OX=3659 GN=Csa_5G160210 PE=3 SV=1	[more]
A0A6J1H326	5.7e-109	85.89	axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111459241 PE=3 ...	[more]
A0A6J1K906	3.7e-108	86.48	axial regulator YABBY 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491215 PE=3 SV...	[more]
A0A6J1DS48	6.9e-107	93.43	axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111023361 PE=3...	[more]
A0A6J1I282	4.2e-104	84.74	axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111468943 PE=3 SV...	[more]

BLAST of CSPI05G06540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147586.1	9.5e-135	100.00	axial regulator YABBY 5 [Cucumis sativus] >KGN50218.1 hypothetical protein Csa_0...	[more]
XP_038906988.1	5.1e-120	92.74	axial regulator YABBY 5-like [Benincasa hispida]	[more]
XP_022957809.1	1.2e-108	85.89	axial regulator YABBY 5-like [Cucurbita moschata]	[more]
KAG7036137.1	3.4e-108	85.14	Axial regulator YABBY 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022995783.1	7.6e-108	86.48	axial regulator YABBY 1-like [Cucurbita maxima]	[more]

BLAST of CSPI05G06540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45190.1	1.5e-61	61.64	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	4.4e-61	59.29	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.2	3.7e-52	56.54	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	3.4e-45	55.36	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	3.4e-45	55.36	plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 44..208 e-value: 8.3E-71 score: 237.9
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..246
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 152..227 e-value: 6.3E-6 score: 28.4
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 152..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31675:SF4	AXIAL REGULATOR YABBY 3	coord: 1..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G06540.1	CSPI05G06540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0010154	fruit development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:2000024	regulation of leaf development
biological_process	GO:1902183	regulation of shoot apical meristem development
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus