CSPI05G06530 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G06530
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	thylakoid lumenal protein TL20.3, chloroplastic
Location	Chr5: 5845857 .. 5850188 (-)
RNA-Seq Expression	CSPI05G06530
Synteny	CSPI05G06530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAACACTAAATCTCTTGCTGTCCAATCGTTTTCTTTCCCCTCTTTCTCATCTTCTCAGCTTTTCCGGCAAAATATTTTTCTTCCCTGGAGCAGAAAAGATACCCAAATTTCAAATTCTCATGGCACTTTCTTCCATTTCTTCACTATCGGTAAAATGTTTACCCTTGAATTCTTCTAAATCAAGGCATCCATGTTCTCTACAAACTAGGAAACAAATTTCCATGGTATCTCAGATAAACCCACAAAAGGATCAAACTCAAGGTGAACCATGCTACTCTTTTTCATCCTTGTTTCTCTAGTTCTGATGGCGAATTCTGCCTTCCATGCTTGTTGATGCCTTCACTAACTTGAATTTCCTTGAAAAGGAAGATTGTTCCGAGAGGAAGCACATTGGTAAGATTACAGAGCCCAAGAGATGGCAAAAATTGGTTTCAACTGCTTTGGCTGCTGCTGCAGTCATTGGTTTTAGCTCAGGCATGCCTTCAATTGCTGAACTCAACAAGTATGAGGCTGATACCCGTGGTGAATTTGGAATTGGATCCGCCGCTCAATATGGTTCTGCAGATCTCAGGTGTTTAGGCTTTGAAGTTACCATTCAGTCCCTTGTTGCCACTTAGTTATACTGATAGTCGATATACTTCTTCTATGAACAGGAAAGCAGTGCATATTAATGAAAATTTCAGGTATTTTCCCACCTGTTTCATCATTCCTTTGCGCAATGCTGCTTTGATTCATAAAATCCCTGTTCTGAAACTAAGCACAATTTGAAATCAGGATCGAAGGAAAGCTATAAGTAAAATGGAGTCGTAAAGTAAACCCAACTCCCCTCCCCAATTTATAACAGTCAATACGTAAATGAAGTCTAGTCTTTGCTTTGAAATGATAACTTCTGGCGCAATCTTACTTGGTGCTCACCGATTCCAATTGAACCTAATGACTGATACAGGAGAGCCAATTTCACATCTGCTGATATGAGGGAATCAGATTTCAGTGGCTGTACATTCAATGGCGCATATCTTGAAAAAGCTGTTGCATACAAGACAAATTTCTCAGGTAAACTAATTACTAAATATCATAGAATCATGAATGACCATGAAACCATTACACATGAGCTGGCAGAACTTTGTATGGCATAAACTCATTCTATGGATTTATACATAATATCAAAGAGAAACTTGATCAAATCATCGGACTCAAGTCTCTTTGCCTTCAAGATTTACTGATTTAAACTTCTTGCCTTGCCTCCACGGGCAATTTGACGATGCTGTCAAACCCTGCACCACAACTCTTTTTGCAATAGATTCAGGGCAACTTGCAAGTTTTCCTTGCTTGGACTTCACATTATCAAATCCTCTCGAAATCCCTTCCCCTATACTTCCATCCCCATTCCTAGATGTCTTCCTCAGTGGATCCTCTAAAATGATATGGTCTTCAGGTCCAATCCTGCGAGCGATTGAACAAGCTCCAGAGAAGCTCTCGGCACTTGATTTCTTTGCAACTTTGGTTAATGATACAGCATTCCAAACTCGTTTTTTAACTCTTGAACCATCCATCTGCAAACATTTTGAGGAATTTCGAATTGTAAGCGGAGGAGCACCTCTTCCACACCCAGGAGGAAAGCTTCTAATCGCCGAAAGACCCTTACGAGGTGGATGAAACTTAGGCAAGTTATCCCCAACATGTTCCTTTGGAACATTGACAATCTCATTCTCATCTTCAGAAGGACTTAAAACAGTAAGTGGGTCAACTACCATAGCAGAATCATGTACTGCATCCTTCATCATTGAAAAAGGGTAGTCCTCTGGTTCCAACACCCTATAAGTTAATCTATGATTCTGATTACACTCCATCAAAAAATGAAGAAGAGCAAAAATCTTTTGTTGCTGGTCCTCCATTGAAACCTCCGGAGTTGATGACTCCATTGAGAGTGGGTAAATCAAAACCTAACCATATAACAAAAGAAATTAAACACTTCTAACGAAAACAACATCAAAATAACTAAATCAAAACGATCTTTAATGTTATACAAACATTGAATTGAAGCAACCAACCAATGAACCACTGTTTTCTTGACAAACCACAAGAATGGATTAGGAAGATTCAGAAGAAAAGAAGAATGAACAAAAAAACAGACAAATCAGAACCGCAAAAAACAGATAAACAAGTTAATGGTTCTTAGAGGCACGATTTACAGAAAAGTGAATATTTGAAATAGAATAATAGATTAATCTAAATAAAATCTAACCTTCGAATCCTTAAAAAAGTTGAAGTTTTATCTTTTCGTCAGTATCAATGTGATCTCCAAAAGTTCTAGGGTTTGCTGGACCGTTCTTCTTCCGTTCTTTAGAGCTTTGTTGAAATTAAAATTTCCCGCGAGGATGGACGGACTTTACACACCGGATACGACGTCGCTTAAGCTGAAAAAGTAAAATGTAAAATAACATTTTCTAGAACAATAATAGTATTAAACACCCGGGACTTTATACACTCGATATGATACAGTGTATACGCGAGTTGCTGGTCGGGTCAACATTTTTGGACCAACCTGAATTTTTTTTATTGGTCGAGTTACCAATTCAAATAAGATTTTTAACACAACTCGAATCACTTTAGAGGAAATAAAAGTAATGATATGGTATATACACTACATGTATCTATGTATCTATGTACTCGAGTTGCTTCTAATAACCTATGCACTTTATTATCGATGGAGGATTCAATCCCTTTTTTAGAGAATGGGAGTTGATGGACTTTTCATAGGACCCATTTTATTTACAAGGTTTATCACCACTTTATCTCCTTTGGCAACTTGACCAACCTAGCTTGTGATTCTTCATCATTTTATTTTCTAATGTTAGCAACTTATAGCTGTTAAATAAGATCATTTTCTGCCAGTGGATTGGATTGTTGATTAGTTATTTATTTTTTTATTTTTTATTTTTTATTATAAGTATATTTCTTTATTAACTTAAATTATTTAAATTTGTCCAAACAGATCTTAATAACTAACATTTAATAAATCTCAAAATCTAATATATCTATTAAAATTTTGAGTTGGTTGGAGCAACCCAGTCGAATCCAAACCAACTTAGAAAAATATACCAAGAATTCAATCTAACTAAATTCTTATTATTTGGATTGTTGAGGTTATTTAAACACCTTGTGTTAACTTTTAAAAAATTGTAGGGATGTTTCTACATTCTCATATGTTTATAAATTAACATAAATGATTGAAACAATCATAAAAACCTAAAAAATAAGTATTAAAATATCATTAAAGAAATGTGATATAAACAAAGAATTAGTTAAACTTGTTTAAAAGTACTATAAAAGGTTTATTTATTAATTTATTTATGTTGTGATTTTCTATATAAATTTTTTAATAATATCTATTGATTTCTTACATATTATCAGCCTATTTTATTGAATAGAAATATCAACATGTTGGTTTACATCTATATGTGTGTTAGAAAGTGAAAGACAGAGAAAAGTATATCAGATTGTACTCATCAAATATCATCTCAACTTTTACTATTATTGCAGGTGCAGATTTGAGTGACACATTGATGGATCGTATGGTAAGTTCTTGAATTAAGGAATGTATATTTTTGAAGTACACAATACCAAAAAAAAAAATACAAATATGATCAATTTTAGATTCACCTAATACAATTTTGTTTTTTTGTTTTTGTTTTTGTTTAAGGATTGGTAAAAAGGATAACTTTAGTTTGGGATTATTATTCAGGTATTAAATGAAGCAAATTTTACAAATGCAGTACTAGTTAGATCGGTGCTAACACGAAGCGATTTAGGCGGTGCCATTATCGTAGGTGCCGACTTCAGCGATGCCGTCATTGACCTTCCTCAGAAGCAAGTTGGTGTTTAAACTTCAATTTATATTTACCCTGGAGCTAAATAAAAAATTGGAAAAGGGTATTTTGATTAATTGATTGTGATTAATATAATTTTCAGGCCCTTTGCAAGTATGCGAGTGGAACGAACCCAGTGACGGGAGTGAGCACGAGGGCGAGCTTAGGGTGCGGGAACAGCCGGAGAAATGCGTATGGGACGCCGTCGTCTCCACTGCTGAGCGCGCCGCCGCAGCAGTTGCTTGACCGCGATGGTTTCTGCGACCAAGACACTGGCCTTTGTGAGGCCACTAAATAGGTAGATAAATACACTTTGAAGGAACTTTCCAGAAAAAAGTGTTGATTGGTTTGTATATATATTATATAATATACTCTTTACATGCAAAAGAAGAAGAAGAAGAAGAAGCAATTACTGTTATTTATGTATATTTTTTTAAAAAAATTTAGTTTCTGATTCTAAC

mRNA sequence

CCAAACACTAAATCTCTTGCTGTCCAATCGTTTTCTTTCCCCTCTTTCTCATCTTCTCAGCTTTTCCGGCAAAATATTTTTCTTCCCTGGAGCAGAAAAGATACCCAAATTTCAAATTCTCATGGCACTTTCTTCCATTTCTTCACTATCGGTAAAATGTTTACCCTTGAATTCTTCTAAATCAAGGCATCCATGTTCTCTACAAACTAGGAAACAAATTTCCATGGTATCTCAGATAAACCCACAAAAGGATCAAACTCAAGATTGTTCCGAGAGGAAGCACATTGGTAAGATTACAGAGCCCAAGAGATGGCAAAAATTGGTTTCAACTGCTTTGGCTGCTGCTGCAGTCATTGGTTTTAGCTCAGGCATGCCTTCAATTGCTGAACTCAACAAGTATGAGGCTGATACCCGTGGTGAATTTGGAATTGGATCCGCCGCTCAATATGGTTCTGCAGATCTCAGGAAAGCAGTGCATATTAATGAAAATTTCAGGAGAGCCAATTTCACATCTGCTGATATGAGGGAATCAGATTTCAGTGGCTGTACATTCAATGGCGCATATCTTGAAAAAGCTGTTGCATACAAGACAAATTTCTCAGGTGCAGATTTGAGTGACACATTGATGGATCGTATGGTATTAAATGAAGCAAATTTTACAAATGCAGTACTAGTTAGATCGGTGCTAACACGAAGCGATTTAGGCGGTGCCATTATCGTAGGTGCCGACTTCAGCGATGCCGTCATTGACCTTCCTCAGAAGCAAGCCCTTTGCAAGTATGCGAGTGGAACGAACCCAGTGACGGGAGTGAGCACGAGGGCGAGCTTAGGGTGCGGGAACAGCCGGAGAAATGCGTATGGGACGCCGTCGTCTCCACTGCTGAGCGCGCCGCCGCAGCAGTTGCTTGACCGCGATGGTTTCTGCGACCAAGACACTGGCCTTTGTGAGGCCACTAAATAGGTAGATAAATACACTTTGAAGGAACTTTCCAGAAAAAAGTGTTGATTGGTTTGTATATATATTATATAATATACTCTTTACATGCAAAAGAAGAAGAAGAAGAAGAAGCAATTACTGTTATTTATGTATATTTTTTTAAAAAAATTTAGTTTCTGATTCTAAC

Coding sequence (CDS)

ATGGCACTTTCTTCCATTTCTTCACTATCGGTAAAATGTTTACCCTTGAATTCTTCTAAATCAAGGCATCCATGTTCTCTACAAACTAGGAAACAAATTTCCATGGTATCTCAGATAAACCCACAAAAGGATCAAACTCAAGATTGTTCCGAGAGGAAGCACATTGGTAAGATTACAGAGCCCAAGAGATGGCAAAAATTGGTTTCAACTGCTTTGGCTGCTGCTGCAGTCATTGGTTTTAGCTCAGGCATGCCTTCAATTGCTGAACTCAACAAGTATGAGGCTGATACCCGTGGTGAATTTGGAATTGGATCCGCCGCTCAATATGGTTCTGCAGATCTCAGGAAAGCAGTGCATATTAATGAAAATTTCAGGAGAGCCAATTTCACATCTGCTGATATGAGGGAATCAGATTTCAGTGGCTGTACATTCAATGGCGCATATCTTGAAAAAGCTGTTGCATACAAGACAAATTTCTCAGGTGCAGATTTGAGTGACACATTGATGGATCGTATGGTATTAAATGAAGCAAATTTTACAAATGCAGTACTAGTTAGATCGGTGCTAACACGAAGCGATTTAGGCGGTGCCATTATCGTAGGTGCCGACTTCAGCGATGCCGTCATTGACCTTCCTCAGAAGCAAGCCCTTTGCAAGTATGCGAGTGGAACGAACCCAGTGACGGGAGTGAGCACGAGGGCGAGCTTAGGGTGCGGGAACAGCCGGAGAAATGCGTATGGGACGCCGTCGTCTCCACTGCTGAGCGCGCCGCCGCAGCAGTTGCTTGACCGCGATGGTTTCTGCGACCAAGACACTGGCCTTTGTGAGGCCACTAAATAG

Protein sequence

MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITEPKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKAVHINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK*

Homology

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BLAST of CSPI05G06530 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 7.5e-99
Identity = 202/283 (71.38%), Postives = 227/283 (80.21%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPL---NSSKSRHPCSLQ----TRKQISMVSQINPQKDQTQDCSERK 60
           MA SS+S L +K L +   +SS SR P   Q     R Q+S  S +   KD +   + R+
Sbjct: 1   MAFSSLSPLPMKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSRSNLE-IKDSS---NTRE 60

Query: 61  HIGKITEPKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSAD 120
                 E   W++++S A+ AAAVI  SSG+P++AELN++EADTRGEFGIGSAAQYGSAD
Sbjct: 61  GCCSSAESNTWKRILSAAM-AAAVIASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSAD 120

Query: 121 LRKAVHINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMV 180
           L K VH NENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMV
Sbjct: 121 LSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMV 180

Query: 181 LNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTR 240
           LNEAN TNAVLVRSVLTRSDLGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGV TR
Sbjct: 181 LNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTR 240

Query: 241 ASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCE 277
            SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCD+ TGLC+
Sbjct: 241 KSLGCGNSRRNAYGSPSSPLLSAPPQRLLGRDGFCDEKTGLCD 278

[Close]

BLAST of CSPI05G06530 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.6e-16
Identity = 53/135 (39.26%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 104 GSAAQYGSADLRKAVHINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGAD 163
           GS+A Y    L       ++   A FT+AD+ +S+FS     GA    +     +  GAD
Sbjct: 44  GSSASYEDVKLIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGAD 103

Query: 164 LSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASG 223
           L++ L        A+ TNAVL  +++ R+    A I GADFS AV+D+ +   LC  A G
Sbjct: 104 LTNGLAYLTSFKGADLTNAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADG 163

Query: 224 TNPVTGVSTRASLGC 239
            NP TGVSTR SLGC
Sbjct: 164 VNPKTGVSTRESLGC 178

[Close]

BLAST of CSPI05G06530 vs. ExPASy Swiss-Prot
Match: Q52118 (Uncharacterized protein in mobD 3'region OS=Pantoea stewartii subsp. stewartii OX=66271 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05
Identity = 36/104 (34.62%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 105 SAAQYGSADLRKAVHINENFRRANFTSADMRESDFSGCTFNGAYLEKA---VAY--KTNF 164
           S A   +ADL++A   N N   A+ T+A++ ++D      +GA L  A   +AY  + + 
Sbjct: 170 SNANLSNADLKRADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADL 229

Query: 165 SGADLSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGAD 204
           S A+LS+  + R  L++AN ++A L    L R+DL  AI+ GA+
Sbjct: 230 SNANLSNADLKRADLSDANLSDANLTNVDLKRADLSNAILKGAN 273

[Close]

BLAST of CSPI05G06530 vs. ExPASy Swiss-Prot
Match: Q55837 (Uncharacterized protein slr0516 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0516 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.1e-04
Identity = 29/85 (34.12%), Postives = 43/85 (50.59%), Query Frame = 0


Query: 123 NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFTNA 182
           + R  N  +A +  SD SG   +G  L +A+  + N +GA+LS+T +    L EAN   A
Sbjct: 49  DLREFNLENARLNRSDLSGANLSGVNLRRALLDRANLTGANLSETDLTEAALTEANLAGA 108

Query: 183 VLVRSVLTRSDLGGAIIVGADFSDA 208
            L  + L RS L    + GA+   A
Sbjct: 109 DLSGANLERSFLRDVDLTGANLKGA 133

[Close]

BLAST of CSPI05G06530 vs. ExPASy Swiss-Prot
Match: P73709 (Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1819 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.4e-04
Identity = 37/105 (35.24%), Postives = 50/105 (47.62%), Query Frame = 0


Query: 105 SAAQYGSADLRKAVHINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADL 164
           S A+  + + + A+  + N  R N T      S+ S    N A L +A   K N   A+L
Sbjct: 229 SEAEMTAVNCQGAIMTHVNLNRTNLTG-----SNLSFTRMNSADLSRANLTKANLQEAEL 288

Query: 165 SDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVI 210
            +    R  L EANF NA LV     R+DL  A +VGADF  A +
Sbjct: 289 IEAFFARANLTEANFINANLV-----RADLMSANMVGADFQGATM 323

[Close]

BLAST of CSPI05G06530 vs. ExPASy TrEMBL
Match: A0A0A0KP67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160200 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.0e-151
Identity = 278/279 (99.64%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE 60
           MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE
Sbjct: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE 60

Query: 61  PKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKAVHI 120
           PKRWQKLVSTALAAAAVIGFSSGMPS+AELNKYEADTRGEFGIGSAAQYGSADLRKAVHI
Sbjct: 61  PKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLRKAVHI 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 279

[Close]

BLAST of CSPI05G06530 vs. ExPASy TrEMBL
Match: A0A1S3ATE2 (thylakoid lumenal protein TL20.3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482643 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.2e-145
Identity = 271/281 (96.44%), Postives = 274/281 (97.51%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERK--HIGKI 60
           MALSSISSLS KCLPLNSSKS+HP SLQ RK+IS VSQINPQKDQTQDCSERK  HIGKI
Sbjct: 1   MALSSISSLSAKCLPLNSSKSKHPSSLQPRKRISTVSQINPQKDQTQDCSERKHAHIGKI 60

Query: 61  TEPKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKAV 120
           TEPKRWQKLVSTALAAAAVIGFSSGMPS+AELNKYEADTRGEFGIGSAAQYGSADLRKAV
Sbjct: 61  TEPKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLRKAV 120

Query: 121 HINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN 180
           HINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN
Sbjct: 121 HINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN 180

Query: 181 FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 240
           FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC
Sbjct: 181 FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 240

Query: 241 GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 280
           GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQ TGLCEATK
Sbjct: 241 GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 281

[Close]

BLAST of CSPI05G06530 vs. ExPASy TrEMBL
Match: A0A6J1E828 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430263 PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 6.6e-138
Identity = 256/279 (91.76%), Postives = 267/279 (95.70%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE 60
           MALSS+SSLS+KCLP +SSKS+ P SLQ RK  S+VSQ+N QKDQTQDCSERKHIGKI+E
Sbjct: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQDCSERKHIGKISE 60

Query: 61  PKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKAVHI 120
           PKRWQK VSTALAAAAVI FSSGMPSIAELNKYEADTRGEFGIGSAAQ+GSADLRKAVH+
Sbjct: 61  PKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN T
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLL+RDGFCD+ TGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK 279

[Close]

BLAST of CSPI05G06530 vs. ExPASy TrEMBL
Match: A0A6J1I174 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468942 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.3e-137
Identity = 255/279 (91.40%), Postives = 267/279 (95.70%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE 60
           MALSS+SSLS+KCLP +SSKS+ P SLQ RK  S+VSQ+N QK QTQDCSERKHIGKI+E
Sbjct: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKPFSIVSQVNLQKGQTQDCSERKHIGKISE 60

Query: 61  PKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKAVHI 120
           PKRWQKLVSTALAAAAVI FSSGMPSIAELNKYEADTRGEFGIGSAAQ+GSADLRKAVH+
Sbjct: 61  PKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN T
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLL+RDGFCD+ TGLCEA+K
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEASK 279

[Close]

BLAST of CSPI05G06530 vs. ExPASy TrEMBL
Match: A0A6J1E2Q9 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430263 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.8e-136
Identity = 256/282 (90.78%), Postives = 267/282 (94.68%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQ---DCSERKHIGK 60
           MALSS+SSLS+KCLP +SSKS+ P SLQ RK  S+VSQ+N QKDQTQ   DCSERKHIGK
Sbjct: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGK 60

Query: 61  ITEPKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKA 120
           I+EPKRWQK VSTALAAAAVI FSSGMPSIAELNKYEADTRGEFGIGSAAQ+GSADLRKA
Sbjct: 61  ISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VH+NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           N TNAVLVRSVLTRSDLGGA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 280
           CGNSRRNAYGTPSSPLLSAPPQQLL+RDGFCD+ TGLCEATK
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK 282

[Close]

BLAST of CSPI05G06530 vs. NCBI nr
Match: XP_004147585.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Cucumis sativus] >KGN50217.1 hypothetical protein Csa_000345 [Cucumis sativus])

HSP 1 Score: 544.3 bits (1401), Expect = 6.3e-151
Identity = 278/279 (99.64%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE 60
           MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE
Sbjct: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE 60

Query: 61  PKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKAVHI 120
           PKRWQKLVSTALAAAAVIGFSSGMPS+AELNKYEADTRGEFGIGSAAQYGSADLRKAVHI
Sbjct: 61  PKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLRKAVHI 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 279

[Close]

BLAST of CSPI05G06530 vs. NCBI nr
Match: XP_008437129.1 (PREDICTED: thylakoid lumenal protein TL20.3, chloroplastic [Cucumis melo])

HSP 1 Score: 523.9 bits (1348), Expect = 8.8e-145
Identity = 271/281 (96.44%), Postives = 274/281 (97.51%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERK--HIGKI 60
           MALSSISSLS KCLPLNSSKS+HP SLQ RK+IS VSQINPQKDQTQDCSERK  HIGKI
Sbjct: 1   MALSSISSLSAKCLPLNSSKSKHPSSLQPRKRISTVSQINPQKDQTQDCSERKHAHIGKI 60

Query: 61  TEPKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKAV 120
           TEPKRWQKLVSTALAAAAVIGFSSGMPS+AELNKYEADTRGEFGIGSAAQYGSADLRKAV
Sbjct: 61  TEPKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLRKAV 120

Query: 121 HINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN 180
           HINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN
Sbjct: 121 HINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN 180

Query: 181 FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 240
           FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC
Sbjct: 181 FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 240

Query: 241 GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 280
           GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQ TGLCEATK
Sbjct: 241 GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 281

[Close]

BLAST of CSPI05G06530 vs. NCBI nr
Match: XP_038875985.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 515.0 bits (1325), Expect = 4.1e-142
Identity = 265/279 (94.98%), Postives = 271/279 (97.13%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE 60
           MALSSISSLSVKCLPL+SSKS+ P  LQ RK IS+VSQINPQKDQTQDCSERKHIGK TE
Sbjct: 1   MALSSISSLSVKCLPLSSSKSKLPSCLQPRKPISLVSQINPQKDQTQDCSERKHIGKSTE 60

Query: 61  PKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKAVHI 120
           PKRWQKLVSTALAAAAVI FSSGMPSIAELNKYEA+TRGEFGIGSAAQ+GSADLRKAVH+
Sbjct: 61  PKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEAETRGEFGIGSAAQFGSADLRKAVHV 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQ TGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 279

[Close]

BLAST of CSPI05G06530 vs. NCBI nr
Match: XP_038875987.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 506.1 bits (1302), Expect = 1.9e-139
Identity = 263/279 (94.27%), Postives = 269/279 (96.42%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE 60
           MALSSISSLSVKCLPL+SSKS+ P  LQ RK IS+VSQINPQKDQTQDCSERKHIGK TE
Sbjct: 1   MALSSISSLSVKCLPLSSSKSKLPSCLQPRKPISLVSQINPQKDQTQDCSERKHIGKSTE 60

Query: 61  PKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKAVHI 120
           PKRWQKLVSTALAAAAVI FSSGMPSIAELNKYEA+TRGEFGIGSAAQ+GSADLRKAVH+
Sbjct: 61  PKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEAETRGEFGIGSAAQFGSADLRKAVHV 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFS  DLSDTLMDRMVLNEANFT
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFS--DLSDTLMDRMVLNEANFT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQ TGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 277

[Close]

BLAST of CSPI05G06530 vs. NCBI nr
Match: XP_022922205.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 500.0 bits (1286), Expect = 1.4e-137
Identity = 256/279 (91.76%), Postives = 267/279 (95.70%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE 60
           MALSS+SSLS+KCLP +SSKS+ P SLQ RK  S+VSQ+N QKDQTQDCSERKHIGKI+E
Sbjct: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQDCSERKHIGKISE 60

Query: 61  PKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKAVHI 120
           PKRWQK VSTALAAAAVI FSSGMPSIAELNKYEADTRGEFGIGSAAQ+GSADLRKAVH+
Sbjct: 61  PKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN T
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLL+RDGFCD+ TGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK 279

[Close]

BLAST of CSPI05G06530 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 361.7 bits (927), Expect = 5.4e-100
Identity = 202/283 (71.38%), Postives = 227/283 (80.21%), Query Frame = 0


Query: 1   MALSSISSLSVKCLPL---NSSKSRHPCSLQ----TRKQISMVSQINPQKDQTQDCSERK 60
           MA SS+S L +K L +   +SS SR P   Q     R Q+S  S +   KD +   + R+
Sbjct: 1   MAFSSLSPLPMKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSRSNLE-IKDSS---NTRE 60

Query: 61  HIGKITEPKRWQKLVSTALAAAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSAD 120
                 E   W++++S A+ AAAVI  SSG+P++AELN++EADTRGEFGIGSAAQYGSAD
Sbjct: 61  GCCSSAESNTWKRILSAAM-AAAVIASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSAD 120

Query: 121 LRKAVHINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMV 180
           L K VH NENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMV
Sbjct: 121 LSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMV 180

Query: 181 LNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTR 240
           LNEAN TNAVLVRSVLTRSDLGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGV TR
Sbjct: 181 LNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTR 240

Query: 241 ASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCE 277
            SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCD+ TGLC+
Sbjct: 241 KSLGCGNSRRNAYGSPSSPLLSAPPQRLLGRDGFCDEKTGLCD 278

[Close]

BLAST of CSPI05G06530 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 350.1 bits (897), Expect = 1.6e-96
Identity = 177/203 (87.19%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 74  AAAVIGFSSGMPSIAELNKYEADTRGEFGIGSAAQYGSADLRKAVHINENFRRANFTSAD 133
           AAAVI  SSG+P++AELN++EADTRGEFGIGSAAQYGSADL K VH NENFRRANFTSAD
Sbjct: 2   AAAVIASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSADLSKTVHSNENFRRANFTSAD 61

Query: 134 MRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFTNAVLVRSVLTRSD 193
           MRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMVLNEAN TNAVLVRSVLTRSD
Sbjct: 62  MRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSD 121

Query: 194 LGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPL 253
           LGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGV TR SLGCGNSRRNAYG+PSSPL
Sbjct: 122 LGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGCGNSRRNAYGSPSSPL 181

Query: 254 LSAPPQQLLDRDGFCDQDTGLCE 277
           LSAPPQ+LL RDGFCD+ TGLC+
Sbjct: 182 LSAPPQRLLGRDGFCDEKTGLCD 204

[Close]

BLAST of CSPI05G06530 vs. TAIR 10
Match: AT5G53490.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.5e-04
Identity = 33/128 (25.78%), Postives = 56/128 (43.75%), Query Frame = 0


Query: 113 DLRKAVHINE--NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMD 172
           DLR   + N+  N +    ++A M  + F G       + KA A + +F G + ++ ++D
Sbjct: 112 DLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVID 171

Query: 173 RMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGV 232
           R+   ++N   AV   +VL+ S    A +    F D +I     Q +C+     N     
Sbjct: 172 RVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR-----NESINE 231

Query: 233 STRASLGC 239
             R  LGC
Sbjct: 232 EGRLVLGC 234

[Close]

BLAST of CSPI05G06530 vs. TAIR 10
Match: AT5G53490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.5e-04
Identity = 33/128 (25.78%), Postives = 56/128 (43.75%), Query Frame = 0


Query: 113 DLRKAVHINE--NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMD 172
           DLR   + N+  N +    ++A M  + F G       + KA A + +F G + ++ ++D
Sbjct: 113 DLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVID 172

Query: 173 RMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGV 232
           R+   ++N   AV   +VL+ S    A +    F D +I     Q +C+     N     
Sbjct: 173 RVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR-----NESINE 232

Query: 233 STRASLGC 239
             R  LGC
Sbjct: 233 EGRLVLGC 235

[Close]

BLAST of CSPI05G06530 vs. TAIR 10
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.5e-04
Identity = 33/128 (25.78%), Postives = 56/128 (43.75%), Query Frame = 0


Query: 113 DLRKAVHINE--NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMD 172
           DLR   + N+  N +    ++A M  + F G       + KA A + +F G + ++ ++D
Sbjct: 127 DLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVID 186

Query: 173 RMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGV 232
           R+   ++N   AV   +VL+ S    A +    F D +I     Q +C+     N     
Sbjct: 187 RVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR-----NESINE 246

Query: 233 STRASLGC 239
             R  LGC
Sbjct: 247 EGRLVLGC 249

The following BLAST results are available for this feature:

BLAST of CSPI05G06530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1Q1	7.5e-99	71.38	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
B1WVN5	1.6e-16	39.26	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]
Q52118	2.2e-05	34.62	Uncharacterized protein in mobD 3'region OS=Pantoea stewartii subsp. stewartii O...	[more]
Q55837	3.1e-04	34.12	Uncharacterized protein slr0516 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
P73709	5.4e-04	35.24	Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]

BLAST of CSPI05G06530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP67	3.0e-151	99.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160200 PE=4 SV=1	[more]
A0A1S3ATE2	4.2e-145	96.44	thylakoid lumenal protein TL20.3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1E828	6.6e-138	91.76	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1I174	3.3e-137	91.40	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita maxima O...	[more]
A0A6J1E2Q9	2.8e-136	90.78	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 OS=Cucurbita moschata...	[more]

BLAST of CSPI05G06530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147585.1	6.3e-151	99.64	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Cucumis sativus] >KG...	[more]
XP_008437129.1	8.8e-145	96.44	PREDICTED: thylakoid lumenal protein TL20.3, chloroplastic [Cucumis melo]	[more]
XP_038875985.1	4.1e-142	94.98	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_038875987.1	1.9e-139	94.27	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_022922205.1	1.4e-137	91.76	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita moschata]	[more]

BLAST of CSPI05G06530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12250.1	5.4e-100	71.38	Pentapeptide repeat-containing protein	[more]
AT1G12250.2	1.6e-96	87.19	Pentapeptide repeat-containing protein	[more]
AT5G53490.2	2.5e-04	25.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.1	2.5e-04	25.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.3	2.5e-04	25.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.160.20.80		coord: 107..239 e-value: 1.0E-26 score: 94.6
None	No IPR available	PANTHER	PTHR47121	THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC	coord: 1..277
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 111..207
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 132..168 e-value: 7.6E-9 score: 35.0 coord: 174..206 e-value: 2.6E-6 score: 26.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G06530.1	CSPI05G06530.1	mRNA