Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGTCCACCTCGATGCCTAAACAAAGTCATGAGAAGGCGTTTTCTAACCTCAACATATAAACGACGCCGTTCCTATCGAAGAAAACGACCATAAAACAATCCCCCGCGGAAAAGCCAAGGTCCCTCAACTCCCACGCTAAAACTGTCAACTACCCCTTTCCCCAATCACTTTCCCTTCACCCATTTATGTCGACCACCAGTTTCCGGCGAAGAATTCCGGCCATTTCCAGTACATCCAACAACCACACACGCCATATTCTCTTTCAATCTCCCCACCGGAGAACTCCCTCGACGAATCGCACTCCTTCCAAGCCCTCCAAATTCACCAGATGTTCCTCGGAACCCAACCTTTGGACCACTGCCATCACCAGCGCCGCCGCTGATCGGACTTTTTCCTCGGAGAAGGAAGGGGAAGAGGTTGTTATTTTTCGTCTTCATACGTTTTCGGAAGCCTTTGCTTCATCTCCTCTGTTGATTCCTTCAACCGATCAACTACTCGAGGTTAGGGCTCCGGTTATTGTTATTGCAAATCAGCGATTATTGCTTTTCTTTAAATCAGATAATCAGAAAATTAGGAGATATAATTATGGCCTAATTCTTCGCTTCTTTAGATATTTATTTACCATTTCTATCATGTTAGTGTATTCTTTGGTTTGGCTCTTGATTTGTTTAGGATGACTAAGAACATCTCGAATATGTTATCTACTGCTCTATATGACCAAGCATAATTTCTTACAGTGAAATTTAGTTGGCGTGCTATTTCTGATTTTGACCAAAAAAGATTTAAATAATTGTTTTATATAAACTTTCATAGTCTACTAACTCTCTAAATGTTTTTATAAAAATTGATTCTACCTAAAATGTAACTAAGTTAGAGTTAGTTCATAGCATATATATCTATGCATCGATTTGTTGTTGTTTACTTTTTCTTCTTCTTTATTTGTAGATTTCATAACAAGTATATTTCTTTAAATTAACTTCATCTTAATTTTAGTATACAAAACATTATTGATATTCAAAAGGGGTTCTTTAATGCAGGGCTACAAGAAAGATGCTAAAGTAGTGATCAATGTGACGGTTGAAGGGAGCCCAGGACCAGTACGAGCCATGGTTAAATTAGGATCTAATGTTGACGACACAATTAAACTAGTTGTTGCTAAATATGTTGAAGAAGGAAGAACTCCAAAGCTTGAACCAACTACATCACCATCCTCCTTTGAATTGCATCGCTCTTATTTCAGCCTCCAGAGTATGACAAATTATTTCTTAATTTACTATACTCGCTTTGAAATTTAAGAAAACGACAATTGAGTTGTCATTCTATATCATCTGCTTAGGTCTTGACAGAAGAGACATTATTGGAGAACTTGGTAGTAGAAGTTTTTATCTTCGAAAGACCCATGGAGGAGAATCATCGACTACTTCACGAGGTATTACCAAAGAAACAATGGACGATGTTGCCTTACCAATTCCTCCTGGTTTCTTGCTTTCTAGCTTCTTTGCTAGAAAAATGGGCAAAATTGTAAGAAGAACAAGAAAGCTCTGGAATTTTATTATCTGTTTGAAGTAAAATTGTGTCTAACAAATTTCAAAGAGTAACACAGAATATTATATATGTCACTCTCTGACCTTATTTTTCCATTTCTATTTTCTTTATCATTTGGTTATTTGGTCATTTCATAAGAGGAGATTTGTCAAGCT
mRNA sequence
GGGGTCCACCTCGATGCCTAAACAAAGTCATGAGAAGGCGTTTTCTAACCTCAACATATAAACGACGCCGTTCCTATCGAAGAAAACGACCATAAAACAATCCCCCGCGGAAAAGCCAAGGTCCCTCAACTCCCACGCTAAAACTGTCAACTACCCCTTTCCCCAATCACTTTCCCTTCACCCATTTATGTCGACCACCAGTTTCCGGCGAAGAATTCCGGCCATTTCCAGTACATCCAACAACCACACACGCCATATTCTCTTTCAATCTCCCCACCGGAGAACTCCCTCGACGAATCGCACTCCTTCCAAGCCCTCCAAATTCACCAGATGTTCCTCGGAACCCAACCTTTGGACCACTGCCATCACCAGCGCCGCCGCTGATCGGACTTTTTCCTCGGAGAAGGAAGGGGAAGAGGTTGTTATTTTTCGTCTTCATACGTTTTCGGAAGCCTTTGCTTCATCTCCTCTGTTGATTCCTTCAACCGATCAACTACTCGAGGGCTACAAGAAAGATGCTAAAGTAGTGATCAATGTGACGGTTGAAGGGAGCCCAGGACCAGTACGAGCCATGGTTAAATTAGGATCTAATGTTGACGACACAATTAAACTAGTTGTTGCTAAATATGTTGAAGAAGGAAGAACTCCAAAGCTTGAACCAACTACATCACCATCCTCCTTTGAATTGCATCGCTCTTATTTCAGCCTCCAGAGTATGACAAATTATTTCTTAATTTACTATACTCGCTTTGAAATTTAAGAAAACGACAATTGAGTTGTCATTCTATATCATCTGCTTAGGTCTTGACAGAAGAGACATTATTGGAGAACTTGGTAGTAGAAGTTTTTATCTTCGAAAGACCCATGGAGGAGAATCATCGACTACTTCACGAGGTATTACCAAAGAAACAATGGACGATGTTGCCTTACCAATTCCTCCTGGTTTCTTGCTTTCTAGCTTCTTTGCTAGAAAAATGGGCAAAATTGTAAGAAGAACAAGAAAGCTCTGGAATTTTATTATCTGTTTGAAGTAAAATTGTGTCTAACAAATTTCAAAGAGTAACACAGAATATTATATATGTCACTCTCTGACCTTATTTTTCCATTTCTATTTTCTTTATCATTTGGTTATTTGGTCATTTCATAAGAGGAGATTTGTCAAGCT
Coding sequence (CDS)
ATGTCGACCACCAGTTTCCGGCGAAGAATTCCGGCCATTTCCAGTACATCCAACAACCACACACGCCATATTCTCTTTCAATCTCCCCACCGGAGAACTCCCTCGACGAATCGCACTCCTTCCAAGCCCTCCAAATTCACCAGATGTTCCTCGGAACCCAACCTTTGGACCACTGCCATCACCAGCGCCGCCGCTGATCGGACTTTTTCCTCGGAGAAGGAAGGGGAAGAGGTTGTTATTTTTCGTCTTCATACGTTTTCGGAAGCCTTTGCTTCATCTCCTCTGTTGATTCCTTCAACCGATCAACTACTCGAGGGCTACAAGAAAGATGCTAAAGTAGTGATCAATGTGACGGTTGAAGGGAGCCCAGGACCAGTACGAGCCATGGTTAAATTAGGATCTAATGTTGACGACACAATTAAACTAGTTGTTGCTAAATATGTTGAAGAAGGAAGAACTCCAAAGCTTGAACCAACTACATCACCATCCTCCTTTGAATTGCATCGCTCTTATTTCAGCCTCCAGAGTATGACAAATTATTTCTTAATTTACTATACTCGCTTTGAAATTTAA
Protein sequence
MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAITSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVEGSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSMTNYFLIYYTRFEI*
Homology
BLAST of CSPI05G06280 vs. ExPASy Swiss-Prot
Match:
Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 8.1e-20
Identity = 78/192 (40.62%), Postives = 111/192 (57.81%), Query Frame = 0
Query: 1 MSTTSFRRRI--PAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNL--- 60
MS + RR++ P + ++ TR F+ + NR+ S F R SEP+L
Sbjct: 1 MSDSIHRRKVSNPVGNGGRSSRTRRTAFRYV---SDKNNRSKSSNKVFERSFSEPSLNRH 60
Query: 61 ---WTTAITSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLI----PSTDQLL--EG 120
+ + + R E+E + +V + SE FASSP L+ PS+ + EG
Sbjct: 61 RDGQSNHLRRPSPMRGLPMEEETKPIV-YLPRIRSEVFASSPSLLNLYSPSSSSPINQEG 120
Query: 121 YKKDA-KVVINVTVEGSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSF 178
K+A KV+I+V VEGSPGPVRAMVKL NV++TIK+VV KY +EGRTPKL+ S+F
Sbjct: 121 NTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLD---RDSAF 180
BLAST of CSPI05G06280 vs. ExPASy TrEMBL
Match:
A0A0A0KKG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157970 PE=4 SV=1)
HSP 1 Score: 337.0 bits (863), Expect = 5.0e-89
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0
Query: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI
Sbjct: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
Query: 61 TSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
TSAAADR FSSEKEGEEVVIFR HTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE
Sbjct: 61 TSAAADRNFSSEKEGEEVVIFRPHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
Query: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSM 178
GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQS+
Sbjct: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSL 177
BLAST of CSPI05G06280 vs. ExPASy TrEMBL
Match:
A0A5A7THG0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003530 PE=4 SV=1)
HSP 1 Score: 315.5 bits (807), Expect = 1.6e-82
Identity = 163/177 (92.09%), Postives = 167/177 (94.35%), Query Frame = 0
Query: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
MSTT+FRRRIPAIS T++NHTRH L QSPHRRTPSTNR PSKPS F RCSSEPNLWTTAI
Sbjct: 1 MSTTAFRRRIPAISRTTDNHTRHNLSQSPHRRTPSTNRAPSKPSNFNRCSSEPNLWTTAI 60
Query: 61 TSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
TSAAADRTFSSEKEGEEVVIFR HTFSEAF SSPLLIPSTDQLLEGYKKDAKVVINVTVE
Sbjct: 61 TSAAADRTFSSEKEGEEVVIFRPHTFSEAFGSSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
Query: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSM 178
GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEP TSPSSFELH SYFSLQS+
Sbjct: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPITSPSSFELHHSYFSLQSL 177
BLAST of CSPI05G06280 vs. ExPASy TrEMBL
Match:
A0A1S3ATX7 (uncharacterized protein At4g22758 OS=Cucumis melo OX=3656 GN=LOC103482666 PE=4 SV=1)
HSP 1 Score: 311.2 bits (796), Expect = 2.9e-81
Identity = 161/177 (90.96%), Postives = 165/177 (93.22%), Query Frame = 0
Query: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
MSTT+FRRRIPAIS T++NH RH L QSPHRRTPSTNR PSKPS F RCSSEPNLWTTAI
Sbjct: 1 MSTTAFRRRIPAISRTTDNHIRHNLSQSPHRRTPSTNRAPSKPSNFNRCSSEPNLWTTAI 60
Query: 61 TSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
TSAAADRTFSSEKEGEEVVIFR HTFSEAF SSPLL PSTDQLLEGYKKDAKVVINVTVE
Sbjct: 61 TSAAADRTFSSEKEGEEVVIFRPHTFSEAFGSSPLLTPSTDQLLEGYKKDAKVVINVTVE 120
Query: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSM 178
GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEP TSPSSFELH SYFSLQS+
Sbjct: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPITSPSSFELHHSYFSLQSL 177
BLAST of CSPI05G06280 vs. ExPASy TrEMBL
Match:
A0A6J1E662 (uncharacterized protein At4g22758 OS=Cucurbita moschata OX=3662 GN=LOC111430315 PE=4 SV=1)
HSP 1 Score: 234.6 bits (597), Expect = 3.5e-58
Identity = 130/177 (73.45%), Postives = 145/177 (81.92%), Query Frame = 0
Query: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
MST+SFRRRIPAIS +N R+ L SPHR+TP NR PS SK +RCSS+P WTTA
Sbjct: 1 MSTSSFRRRIPAISRLTNKSCRN-LSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAA 60
Query: 61 TSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
S DR SSEKEGEEV+IFR HTFSEAFASSPLLIPS Q++EGYKKDAKVVINVTVE
Sbjct: 61 AS-GDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEGYKKDAKVVINVTVE 120
Query: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSM 178
GSPGPVRAMVKLGS+V++TIKLVVAKY EEGRTPKLE S SS+ELH SYFSL+S+
Sbjct: 121 GSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLE-RDSASSYELHHSYFSLRSL 174
BLAST of CSPI05G06280 vs. ExPASy TrEMBL
Match:
A0A6J1I3T9 (uncharacterized protein At4g22758 OS=Cucurbita maxima OX=3661 GN=LOC111468922 PE=4 SV=1)
HSP 1 Score: 229.9 bits (585), Expect = 8.6e-57
Identity = 127/177 (71.75%), Postives = 144/177 (81.36%), Query Frame = 0
Query: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
MS++SFRRRIPAIS +N R+ L SPHR+TP NR PS SK +RCSS+P WT A
Sbjct: 1 MSSSSFRRRIPAISRLTNKSCRN-LSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTVAA 60
Query: 61 TSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
S DR +SEKEGEEV+IFR HTFSEAFASSPLLIPS Q++EGYKKDAKVVINVTVE
Sbjct: 61 AS-GDDRNMTSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEGYKKDAKVVINVTVE 120
Query: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSM 178
GSPGPVRAMVKLGS+V++TIKLVVAKY EEGRTPKLE S SS+ELH SYFSL+S+
Sbjct: 121 GSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLE-RDSASSYELHHSYFSLRSL 174
BLAST of CSPI05G06280 vs. NCBI nr
Match:
XP_004147570.1 (uncharacterized protein At4g22758 [Cucumis sativus] >KGN50190.1 hypothetical protein Csa_000239 [Cucumis sativus])
HSP 1 Score: 337.0 bits (863), Expect = 1.0e-88
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0
Query: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI
Sbjct: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
Query: 61 TSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
TSAAADR FSSEKEGEEVVIFR HTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE
Sbjct: 61 TSAAADRNFSSEKEGEEVVIFRPHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
Query: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSM 178
GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQS+
Sbjct: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSL 177
BLAST of CSPI05G06280 vs. NCBI nr
Match:
KAA0042842.1 (uncharacterized protein E6C27_scaffold44G003530 [Cucumis melo var. makuwa])
HSP 1 Score: 315.5 bits (807), Expect = 3.2e-82
Identity = 163/177 (92.09%), Postives = 167/177 (94.35%), Query Frame = 0
Query: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
MSTT+FRRRIPAIS T++NHTRH L QSPHRRTPSTNR PSKPS F RCSSEPNLWTTAI
Sbjct: 1 MSTTAFRRRIPAISRTTDNHTRHNLSQSPHRRTPSTNRAPSKPSNFNRCSSEPNLWTTAI 60
Query: 61 TSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
TSAAADRTFSSEKEGEEVVIFR HTFSEAF SSPLLIPSTDQLLEGYKKDAKVVINVTVE
Sbjct: 61 TSAAADRTFSSEKEGEEVVIFRPHTFSEAFGSSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
Query: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSM 178
GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEP TSPSSFELH SYFSLQS+
Sbjct: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPITSPSSFELHHSYFSLQSL 177
BLAST of CSPI05G06280 vs. NCBI nr
Match:
XP_008437158.1 (PREDICTED: uncharacterized protein At4g22758 [Cucumis melo])
HSP 1 Score: 311.2 bits (796), Expect = 6.1e-81
Identity = 161/177 (90.96%), Postives = 165/177 (93.22%), Query Frame = 0
Query: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
MSTT+FRRRIPAIS T++NH RH L QSPHRRTPSTNR PSKPS F RCSSEPNLWTTAI
Sbjct: 1 MSTTAFRRRIPAISRTTDNHIRHNLSQSPHRRTPSTNRAPSKPSNFNRCSSEPNLWTTAI 60
Query: 61 TSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
TSAAADRTFSSEKEGEEVVIFR HTFSEAF SSPLL PSTDQLLEGYKKDAKVVINVTVE
Sbjct: 61 TSAAADRTFSSEKEGEEVVIFRPHTFSEAFGSSPLLTPSTDQLLEGYKKDAKVVINVTVE 120
Query: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSM 178
GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEP TSPSSFELH SYFSLQS+
Sbjct: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPITSPSSFELHHSYFSLQSL 177
BLAST of CSPI05G06280 vs. NCBI nr
Match:
XP_038875217.1 (uncharacterized protein At4g22758 [Benincasa hispida])
HSP 1 Score: 268.1 bits (684), Expect = 5.9e-68
Identity = 146/177 (82.49%), Postives = 152/177 (85.88%), Query Frame = 0
Query: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
MS++SFRRRIPAISST NN TR L QSPHRRTP TNR SKPS FTRCSSEPNLW A
Sbjct: 1 MSSSSFRRRIPAISSTRNNKTRLNLSQSPHRRTPPTNRALSKPSIFTRCSSEPNLWANA- 60
Query: 61 TSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
+AAADRT SSEKEGEEVVIFR H FSEAFASSPLLIPS LEGYKKDAKVVINVTVE
Sbjct: 61 -TAAADRTVSSEKEGEEVVIFRPHKFSEAFASSPLLIPSPASFLEGYKKDAKVVINVTVE 120
Query: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSM 178
GSPGPVRAMVKLGS+VD+TIKLVVAKY EEGRTPKLEP SPSSFELH SYFSL S+
Sbjct: 121 GSPGPVRAMVKLGSSVDETIKLVVAKYGEEGRTPKLEPNDSPSSFELHNSYFSLHSL 175
BLAST of CSPI05G06280 vs. NCBI nr
Match:
XP_022922293.1 (uncharacterized protein At4g22758 [Cucurbita moschata])
HSP 1 Score: 234.6 bits (597), Expect = 7.2e-58
Identity = 130/177 (73.45%), Postives = 145/177 (81.92%), Query Frame = 0
Query: 1 MSTTSFRRRIPAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNLWTTAI 60
MST+SFRRRIPAIS +N R+ L SPHR+TP NR PS SK +RCSS+P WTTA
Sbjct: 1 MSTSSFRRRIPAISRLTNKSCRN-LSPSPHRKTPPMNRAPSLSSKLSRCSSDPQFWTTAA 60
Query: 61 TSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLIPSTDQLLEGYKKDAKVVINVTVE 120
S DR SSEKEGEEV+IFR HTFSEAFASSPLLIPS Q++EGYKKDAKVVINVTVE
Sbjct: 61 AS-GDDRNMSSEKEGEEVIIFRPHTFSEAFASSPLLIPSPAQIVEGYKKDAKVVINVTVE 120
Query: 121 GSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSM 178
GSPGPVRAMVKLGS+V++TIKLVVAKY EEGRTPKLE S SS+ELH SYFSL+S+
Sbjct: 121 GSPGPVRAMVKLGSSVEETIKLVVAKYSEEGRTPKLE-RDSASSYELHHSYFSLRSL 174
BLAST of CSPI05G06280 vs. TAIR 10
Match:
AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). )
HSP 1 Score: 98.6 bits (244), Expect = 5.8e-21
Identity = 78/192 (40.62%), Postives = 111/192 (57.81%), Query Frame = 0
Query: 1 MSTTSFRRRI--PAISSTSNNHTRHILFQSPHRRTPSTNRTPSKPSKFTRCSSEPNL--- 60
MS + RR++ P + ++ TR F+ + NR+ S F R SEP+L
Sbjct: 1 MSDSIHRRKVSNPVGNGGRSSRTRRTAFRYV---SDKNNRSKSSNKVFERSFSEPSLNRH 60
Query: 61 ---WTTAITSAAADRTFSSEKEGEEVVIFRLHTFSEAFASSPLLI----PSTDQLL--EG 120
+ + + R E+E + +V + SE FASSP L+ PS+ + EG
Sbjct: 61 RDGQSNHLRRPSPMRGLPMEEETKPIV-YLPRIRSEVFASSPSLLNLYSPSSSSPINQEG 120
Query: 121 YKKDA-KVVINVTVEGSPGPVRAMVKLGSNVDDTIKLVVAKYVEEGRTPKLEPTTSPSSF 178
K+A KV+I+V VEGSPGPVRAMVKL NV++TIK+VV KY +EGRTPKL+ S+F
Sbjct: 121 NTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLD---RDSAF 180
BLAST of CSPI05G06280 vs. TAIR 10
Match:
AT2G27830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 58.5 bits (140), Expect = 6.6e-09
Identity = 38/97 (39.18%), Postives = 56/97 (57.73%), Query Frame = 0
Query: 82 RLHTFSEAFAS-SPLLIPSTDQLLEGYKKDAKVVINVTVEGSPGPVRAMVKLGSNVDDTI 141
R T E F++ + +P T L + K+++NVTV+GS G V+ ++ S V D I
Sbjct: 43 RPKTLPELFSTGQSITVPETVSL---PPRLTKLLLNVTVQGSLGAVQIIISPESTVSDLI 102
Query: 142 KLVVAKYVEEGRTPKLEPTTSPSSFELHRSYFSLQSM 178
V +YV+E R P L P + PS F+LH S FSL+S+
Sbjct: 103 DAAVRQYVKEARRPFL-PESEPSRFDLHYSQFSLESI 135
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q56XJ7 | 8.1e-20 | 40.63 | Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 P... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KKG9 | 5.0e-89 | 98.31 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157970 PE=4 SV=1 | [more] |
A0A5A7THG0 | 1.6e-82 | 92.09 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3ATX7 | 2.9e-81 | 90.96 | uncharacterized protein At4g22758 OS=Cucumis melo OX=3656 GN=LOC103482666 PE=4 S... | [more] |
A0A6J1E662 | 3.5e-58 | 73.45 | uncharacterized protein At4g22758 OS=Cucurbita moschata OX=3662 GN=LOC111430315 ... | [more] |
A0A6J1I3T9 | 8.6e-57 | 71.75 | uncharacterized protein At4g22758 OS=Cucurbita maxima OX=3661 GN=LOC111468922 PE... | [more] |
Match Name | E-value | Identity | Description | |
XP_004147570.1 | 1.0e-88 | 98.31 | uncharacterized protein At4g22758 [Cucumis sativus] >KGN50190.1 hypothetical pro... | [more] |
KAA0042842.1 | 3.2e-82 | 92.09 | uncharacterized protein E6C27_scaffold44G003530 [Cucumis melo var. makuwa] | [more] |
XP_008437158.1 | 6.1e-81 | 90.96 | PREDICTED: uncharacterized protein At4g22758 [Cucumis melo] | [more] |
XP_038875217.1 | 5.9e-68 | 82.49 | uncharacterized protein At4g22758 [Benincasa hispida] | [more] |
XP_022922293.1 | 7.2e-58 | 73.45 | uncharacterized protein At4g22758 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT4G22758.1 | 5.8e-21 | 40.63 | unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... | [more] |
AT2G27830.1 | 6.6e-09 | 39.18 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |