CSPI05G05970 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G05970
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	homeobox protein knotted-1-like 7
Location	Chr5: 5411426 .. 5415603 (-)
RNA-Seq Expression	CSPI05G05970
Synteny	CSPI05G05970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGAAAAAGAAAGAAAAGAAAGAAAAAAAGGAATTGAAAAGTGTCAGGGATTGGGCATAGATGAGCAGCTTTATCTCCCTTTCCTAGTAATGATTCCGTAGCTCTCTTTTATCAATGCTCCTTTACCTCTTACCCTTAATACAAAACAAATTCTCTCTCTCTCTCTCTTTCTTTCTTTATTTCTTCCTTCTTCTTCTTCCCTTCCTTCCTTTTCTCTGTTTGTAAAATTTTCTGAAATTCTCAGACCTGGTGCAGAAAGTTTTGTGTCTCGGATCCCTATATACTCTTCTCTCTCTTTCTTCTTCATTTCACACCATTAACGAGAAAACTGACTCTTCTCTATCAACATATTCATTCAAAACTAAATCCCAACAAACCCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATCACCAATTTCACTATTTGGGCTCACTCATTTCTTCTTTTTTCCTTCTTTACTTTCTAATTTACCTTTTTCTACACAACCCCTTTTTGCTTTTTTCTGCTAATTTTAACTTGGGTTTTTCGAGGGGTTCATTTGAAATGCAAGAACCTGGGTTGGGAATGATGACTGCTGCAGGTGGGTCTAGTGGTGGCTTAAGCGGCGACGTTTCGGTTTCCGGCGAGGGAGTTCATAACAGTCAACTGAAAGCGGAGATTGCTACTCATCCACTTTATGAGCAGCTTCTTTCAGCTCATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGATCAGCTTCCGATGATCGATGCCCAGCTTTCTCAATCCCACCATATTTTGCGCTCTTATGCTTCTTCTCAACAGCATCACCAAAATGCTCATTCCTTAACGCCTCACGAGCGACAAGAGCTTGACAATTTTCTGGTGATTTTTCTTTATTTATTTATTTTAAAGAAAAGATTTAGTCGTATTTTGGAAAGTGGGTTGAACTTTGTTTTTTAATTTATGATGGGGTTTCTTTTCTTTTCTTTTCTTTTTTCAGGCACAGTATATGATCGTTTTGTGTTCTTTCAAAGAGCAGCTTCAACAACATGTGAGAGTCCACGCAGTTGAAGCTGTTATGGCTTGCCGTGAAATTGAAAACACTCTACAAGCTCTTACAGGTATGTACATCTAACTATCTCATCTCAATTCTTAACAAAAATCCCTTTAAAACAAGAAAAACAAAGATAAACCCATGATTTATCATCAGTTTTGAATGTGCATAAAAGTCTCGAAAATGTTACAGCATGAATATGTGCATGGTTTCTTTGTGTTATGAGTGTATAGAGATGTTAAAACAAAGGGGGGTTTTGTTTTGGTTTGAATTCGGGTCCAAATGAGGGTAAAAAAACAAACACCGGAGGATTTTTTGAAAGGGGTTTTTTTGTTTTGGGGGGTTTGAGGGATGAGGATTATGGTGAAAAGCAGCCATGGAAGTGGGTGCAAAAGAGGTCCCTACTTGTGAATACCAAGATTGTAGTTGGGAAAAGGATTGGTCTGTTGGGTTCGGTGAGGGTACCACCAATAGGGGACACCAACAGATAAGGTTGCTTGCCCCTGGCAATACTTGCGTTCCACTGTAAACAATAATAATATTCTCCCTATTATTATATTTCTTCATCTTTTTGCTTTGTAAAGATAGTACATGAACCTAGCTAGCTACTTCTTTTTCCTCTCTCTTTTTTCTTTCTATATATAAAAATAGACTAAAAGAGCTACACTTATCATATATGATTACATTAATCACCAACTGATCATTTTTAATCATTCAAGTGACCTAATATTTTTTTAGGATATGGATATACCCAACGACAAAGCTGTTATGTTTTTGTAAACTTAACTTGCAAATTTGGCTATGAGTTAGAAAGATTTAGAACTTATTGTATGTGGTTTATAAATAGAATTTAGTTCATTCTCACAGTTTGATAAAGTCCTCATGTTTAGTTTAACCGTGCTTTATTGTTCTAGTGAGATATTCTTATACACCACCTGATCCTACGGTGCTTTAGTATTTTATTAAAAGAAATCACTAATCCTAAGTTGGGACTATTAATGAGGTTTTATTTTTTTAATTTTATCACAACATAGAGACTAAATAAGATATTTTATTTTAGTTTTTTTTTTAAATAAAAAAAGAGAAAAAAAAACCTCTTTCATTGGTGAGTGAGTGACCTTTCTAGTTATATGATTTAACAAAACAATCTGGCGAATGAAAGGGTTACCACTCAAGCAGTTGATTGGATGGGTTAAAGAAACTAGGCATTTTATCATAAAGTAATCTGTTGCTTATTGATTGGGTTTGCCAGTTTTAGACCTGCCCTCCTATAACTACAACTACAATGGTCCCTATTCTCAATCTCCATACCTCCATGAAGTTCATGATCAGTTATTCTGTCTGTTTTAAATCATCTCTATTTTGAACCCTAGCATTGAGAATGCATAGAAACTATTCATTACTGCGTCTGCCAATGGATGCTGCTGAGGACCTAAGGGCTGTGGTGTAGGGTCTTAAATACCAATGCAAGCTTTTATATTAAGGACCCTAGGCCGCCTAAAGGGCATTGGAGGCTCATCCTGACAGTATTTAACTAAATGCTGCACTTTATGCGGCTTTTTTGGTCTGTCAAATTTGGATATGTTTAAAACTAAATAAGACACCAAGATTTGGTAACTGAACAAGTCAAACTATTTATTATTATCATTCAAAATGTTGACATTAATGCCTTCTTTTTGAGTTGGAGATTCAAATTCTATCTCCTTTATTTTAAAAATCTACTGTGCAAGAAAGTTAAAAGTGCTTTGTTTAAATTAAATTCAGCTGGATTTTCTTTATTCTACTCTGAACTTTTACAAGGACTAGTTGCTAAAAGTACATAAAAGTATCTTATTCTACAAACTTCGGGTGGTTTTGAATTCTCACACCTTTAATTTTATTTATTGTTTTGGTAGGAGAAAAAGTCAAAGATATGTTGAAATAACAAATAACATGTGGGTTTAATGTCATATCAAGTCATGTAGGAGAAAAGGTTGTTAAAATATAATGAGATTTTAAGTACAGTTAGTTGATGATGGAAGTGGAACCGTCCTTGTTATTTTCTAATGGAAAAATATGATTGCTACAATTATTGACACCGCCAAAGTAGATTAGACCTTGCTTCTTTAGTTGCTGATATTAACTCTGGTCAAAGTTTGGTGTCTTGGATATTTGAAAGGCATTTTCCATTACCAAACATGGAGAGACATTAAAGGTTGAAGTGCCCTTTACCAACTTCGTTTGCTATTTATCATGTTCCGTAGGAGTAAGCCTTGGTGAAGGAACCGGTGCAACAATGTCGGACGACGAAGACGACATTCCGATGGACTTTTCGCTCGATCAATCTGGAGCCGACGCACACGACATGATGGGATTCGGACCACTGCTACCAACTGAATCCGAAAGGTCGCTGATGGAGAGGGTCCGCCAAGAACTGAAGATTGAGCTGAAACAGGTTCCCTTTTCATGATTAAAAAAGAACTTTCCCATTACATACATTGCAGATTAAAAGGGAAAGACAAAGAACTAATTTATATGAACAAATTTGTGGTGTTGGAGATGAACCTGATTTGGAGTCTAAAATGTGGTGGTGTGTTGCAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAGGAAATATTGAGAAAAAGAAGGGCAGGGAAGTTACCTGGGGATACAACAACAGTTTTGAAAAACTGGTGGCAGCAACATTCTAAATGGCCATACCCAACTGTAAGTAAAGAAAAAAATAAACAAACAAAACTCCCATCTTCGAAAATGGAAAACCTCTATAATATTTCGTGTTTGTTTATCCAGGAAGACGATAAGGCTAAGCTAGTGGAGGAGACAGGTTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAGTCAGTGACATCTTTGAAGTCCAAGCGCAAGAGATAAAAAGAAGAGACAGAAAATTTTTCATCCAATTATAATATGAAATATGTTGTAGCTTTTGGTAAAAGGTTATGCTGACAGAGAGAGAGTAACAAAAACATGAGATTAAGCTTACTGTAAAATGAGGTTAGAGAATTAAGGATATTGTGACAGAGATTTGATTAACATGTCTTTTCTTTAAGGTTGTAAATTGTTGG

mRNA sequence

AAAAAAAGAAAAAGAAAGAAAAGAAAGAAAAAAAGGAATTGAAAAGTGTCAGGGATTGGGCATAGATGAGCAGCTTTATCTCCCTTTCCTAGTAATGATTCCGTAGCTCTCTTTTATCAATGCTCCTTTACCTCTTACCCTTAATACAAAACAAATTCTCTCTCTCTCTCTCTTTCTTTCTTTATTTCTTCCTTCTTCTTCTTCCCTTCCTTCCTTTTCTCTGTTTGTAAAATTTTCTGAAATTCTCAGACCTGGTGCAGAAAGTTTTGTGTCTCGGATCCCTATATACTCTTCTCTCTCTTTCTTCTTCATTTCACACCATTAACGAGAAAACTGACTCTTCTCTATCAACATATTCATTCAAAACTAAATCCCAACAAACCCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATCACCAATTTCACTATTTGGGCTCACTCATTTCTTCTTTTTTCCTTCTTTACTTTCTAATTTACCTTTTTCTACACAACCCCTTTTTGCTTTTTTCTGCTAATTTTAACTTGGGTTTTTCGAGGGGTTCATTTGAAATGCAAGAACCTGGGTTGGGAATGATGACTGCTGCAGGTGGGTCTAGTGGTGGCTTAAGCGGCGACGTTTCGGTTTCCGGCGAGGGAGTTCATAACAGTCAACTGAAAGCGGAGATTGCTACTCATCCACTTTATGAGCAGCTTCTTTCAGCTCATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGATCAGCTTCCGATGATCGATGCCCAGCTTTCTCAATCCCACCATATTTTGCGCTCTTATGCTTCTTCTCAACAGCATCACCAAAATGCTCATTCCTTAACGCCTCACGAGCGACAAGAGCTTGACAATTTTCTGGCACAGTATATGATCGTTTTGTGTTCTTTCAAAGAGCAGCTTCAACAACATGTGAGAGTCCACGCAGTTGAAGCTGTTATGGCTTGCCGTGAAATTGAAAACACTCTACAAGCTCTTACAGGAGTAAGCCTTGGTGAAGGAACCGGTGCAACAATGTCGGACGACGAAGACGACATTCCGATGGACTTTTCGCTCGATCAATCTGGAGCCGACGCACACGACATGATGGGATTCGGACCACTGCTACCAACTGAATCCGAAAGGTCGCTGATGGAGAGGGTCCGCCAAGAACTGAAGATTGAGCTGAAACAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAGGAAATATTGAGAAAAAGAAGGGCAGGGAAGTTACCTGGGGATACAACAACAGTTTTGAAAAACTGGTGGCAGCAACATTCTAAATGGCCATACCCAACTGAAGACGATAAGGCTAAGCTAGTGGAGGAGACAGGTTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAGTCAGTGACATCTTTGAAGTCCAAGCGCAAGAGATAAAAAGAAGAGACAGAAAATTTTTCATCCAATTATAATATGAAATATGTTGTAGCTTTTGGTAAAAGGTTATGCTGACAGAGAGAGAGTAACAAAAACATGAGATTAAGCTTACTGTAAAATGAGGTTAGAGAATTAAGGATATTGTGACAGAGATTTGATTAACATGTCTTTTCTTTAAGGTTGTAAATTGTTGG

Coding sequence (CDS)

ATGCAAGAACCTGGGTTGGGAATGATGACTGCTGCAGGTGGGTCTAGTGGTGGCTTAAGCGGCGACGTTTCGGTTTCCGGCGAGGGAGTTCATAACAGTCAACTGAAAGCGGAGATTGCTACTCATCCACTTTATGAGCAGCTTCTTTCAGCTCATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGATCAGCTTCCGATGATCGATGCCCAGCTTTCTCAATCCCACCATATTTTGCGCTCTTATGCTTCTTCTCAACAGCATCACCAAAATGCTCATTCCTTAACGCCTCACGAGCGACAAGAGCTTGACAATTTTCTGGCACAGTATATGATCGTTTTGTGTTCTTTCAAAGAGCAGCTTCAACAACATGTGAGAGTCCACGCAGTTGAAGCTGTTATGGCTTGCCGTGAAATTGAAAACACTCTACAAGCTCTTACAGGAGTAAGCCTTGGTGAAGGAACCGGTGCAACAATGTCGGACGACGAAGACGACATTCCGATGGACTTTTCGCTCGATCAATCTGGAGCCGACGCACACGACATGATGGGATTCGGACCACTGCTACCAACTGAATCCGAAAGGTCGCTGATGGAGAGGGTCCGCCAAGAACTGAAGATTGAGCTGAAACAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAGGAAATATTGAGAAAAAGAAGGGCAGGGAAGTTACCTGGGGATACAACAACAGTTTTGAAAAACTGGTGGCAGCAACATTCTAAATGGCCATACCCAACTGAAGACGATAAGGCTAAGCTAGTGGAGGAGACAGGTTTGCAGCTGAAACAAATAAACAATTGGTTCATCAACCAAAGGAAGAGAAACTGGCACAGCAACTCTCAGTCAGTGACATCTTTGAAGTCCAAGCGCAAGAGATAA

Protein sequence

MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR*

Homology

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BLAST of CSPI05G05970 vs. ExPASy Swiss-Prot
Match: Q9FPQ8 (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana OX=3702 GN=KNAT7 PE=1 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 5.4e-127
Identity = 239/303 (78.88%), Postives = 261/303 (86.14%), Query Frame = 0


Query: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60
           MQE  LGMM    G++ G  GD +V  E   N QLK EIATHP+YEQLL+AHVACLRVAT
Sbjct: 1   MQEAALGMM----GATVGGDGDTAVVAE--QNRQLKGEIATHPMYEQLLAAHVACLRVAT 60

Query: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120
           PIDQLP+I+AQLSQSHH+LRSYAS+   +        H+R ELDNFLAQY++VLCSFKEQ
Sbjct: 61  PIDQLPIIEAQLSQSHHLLRSYASTAVGYH-------HDRHELDNFLAQYVMVLCSFKEQ 120

Query: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGAD-- 180
           LQQHVRVHAVEAVMACREIEN L +LTG +LGEG+GATMS+DEDD+PMDFS D SG D  
Sbjct: 121 LQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFS 180

Query: 181 -AHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT 240
             HDM GFGPLLPTESERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDT
Sbjct: 181 GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDT 240

Query: 241 TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS 300
           TTVLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKS
Sbjct: 241 TTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKS 290

[Close]

BLAST of CSPI05G05970 vs. ExPASy Swiss-Prot
Match: P46606 (Homeobox protein HD1 OS=Brassica napus OX=3708 GN=HD1 PE=2 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 9.2e-127
Identity = 238/303 (78.55%), Postives = 261/303 (86.14%), Query Frame = 0


Query: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60
           MQE  LGM+ A  G  GG  GD +V  E   N Q+K EIATHP+Y+QLL+AHVACLRVAT
Sbjct: 1   MQEAALGMIGATVG--GGGDGDAAVVAE--QNRQMKGEIATHPMYDQLLAAHVACLRVAT 60

Query: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120
           PIDQLP+I+AQLS SHH+LRSYAS+      A   + H+RQELDNFLAQY++VLCSFKEQ
Sbjct: 61  PIDQLPIIEAQLSHSHHLLRSYAST------AVGFSHHDRQELDNFLAQYVMVLCSFKEQ 120

Query: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGAD-- 180
           LQQHVRVHAVEAVMACREIEN L +LTG +LGEG+GATMS+DEDD+ MDFS D SG D  
Sbjct: 121 LQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLQMDFSSDNSGVDFS 180

Query: 181 -AHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT 240
             HDM GFGPLLPTESERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDT
Sbjct: 181 GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDT 240

Query: 241 TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS 300
           TTVLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKS
Sbjct: 241 TTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKS 293

[Close]

BLAST of CSPI05G05970 vs. ExPASy Swiss-Prot
Match: Q94LW3 (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HOS66 PE=2 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 6.4e-112
Identity = 218/311 (70.10%), Postives = 249/311 (80.06%), Query Frame = 0


Query: 3   EPGLGMMTAAGG-----------SSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSA 62
           E G+G  T  GG           ++   +   + + E      LK EIA HPL EQL++A
Sbjct: 10  EMGVGSFTGGGGGGECSSSSATAAAAAAAAAAAAAAEAEERQLLKGEIAVHPLCEQLVAA 69

Query: 63  HVACLRVATPIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYM 122
           HV CLRVATPID LP+IDAQL+QS  +L SYA+   HH+    L+PH++QELD+FLAQYM
Sbjct: 70  HVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA---HHR--PFLSPHDKQELDSFLAQYM 129

Query: 123 IVLCSFKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDD-IPMDF 182
           ++LCSF+EQLQQHVRVHAVEAVMACREIE +LQ LTG +L EGTGATMS+DED+  PM  
Sbjct: 130 MLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETAPMLE 189

Query: 183 SLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRA 242
                G+D HD+MGFGPL+PT+SERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRA
Sbjct: 190 GPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRA 249

Query: 243 GKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQ 302
           GKLPGDTTT+LK WWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NSQ
Sbjct: 250 GKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSQ 309

[Close]

BLAST of CSPI05G05970 vs. ExPASy Swiss-Prot
Match: O04136 (Homeobox protein knotted-1-like 3 OS=Malus domestica OX=3750 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.0e-101
Identity = 195/290 (67.24%), Postives = 227/290 (78.28%), Query Frame = 0


Query: 13  GGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPMIDAQL 72
           GG  GG+            N++ KAEI  HPLYE LLSAHVACLR+ATP+DQLP IDAQL
Sbjct: 153 GGGDGGVM--------NWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQL 212

Query: 73  SQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHAVEA 132
           +QS +++  Y++              + +ELD F+  Y+++LCSFKEQLQQHVRVHA+EA
Sbjct: 213 AQSQNVVAKYSALGNGMVG-------DDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEA 272

Query: 133 VMACREIENTLQALTGVSLGEGTGATMSDDEDD-IPMDFSLDQSGADAHDMMGFGPLLPT 192
           VMAC EIE +LQ+LTGVS GEGT ATMSDDEDD +  D +L   G + HD MGFGPL+PT
Sbjct: 273 VMACWEIEQSLQSLTGVSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPT 332

Query: 193 ESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKW 252
           ESERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ HSKW
Sbjct: 333 ESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKW 392

Query: 253 PYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 302
           PYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN  + T LKSKRKR
Sbjct: 393 PYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKR 427

[Close]

BLAST of CSPI05G05970 vs. ExPASy Swiss-Prot
Match: P48000 (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana OX=3702 GN=KNAT3 PE=1 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 5.6e-100
Identity = 194/292 (66.44%), Postives = 231/292 (79.11%), Query Frame = 0


Query: 13  GGSSGGLSGDVSVSGEGV---HNSQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPMID 72
           GG      G  + + +GV    N++ KAEI +HPLYEQLLSAHVACLR+ATP+DQLP ID
Sbjct: 134 GGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRID 193

Query: 73  AQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHA 132
           AQL+QS H++  Y++     Q        + +ELD F+  Y+++LCSFKEQLQQHVRVHA
Sbjct: 194 AQLAQSQHVVAKYSALGAAAQGLVG----DDKELDQFMTHYVLLLCSFKEQLQQHVRVHA 253

Query: 133 VEAVMACREIENTLQALTGVSLGEGTGATMSDDEDD-IPMDFSLDQSGADAHDMMGFGPL 192
           +EAVMAC EIE +LQ+LTGVS GEG GATMSDDED+ +  D ++   G    D++GFGPL
Sbjct: 254 MEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGL---DVLGFGPL 313

Query: 193 LPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQH 252
           +PTESERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ H
Sbjct: 314 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSH 373

Query: 253 SKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 301
           SKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN  S T LK+KRK
Sbjct: 374 SKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRK 418

[Close]

BLAST of CSPI05G05970 vs. ExPASy TrEMBL
Match: A0A0A0KKD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G156150 PE=3 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.5e-164
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60
           MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT
Sbjct: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60

Query: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120
           PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ
Sbjct: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120

Query: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH 180
           LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH
Sbjct: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH 180

Query: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240
           DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV
Sbjct: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240

Query: 241 LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 300
           LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK
Sbjct: 241 LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 300

Query: 301 R 302
           R
Sbjct: 301 R 301

[Close]

BLAST of CSPI05G05970 vs. ExPASy TrEMBL
Match: A0A1S3ATE3 (homeobox protein knotted-1-like 7 OS=Cucumis melo OX=3656 GN=LOC103482695 PE=3 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60
           MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT
Sbjct: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60

Query: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120
           PIDQLPMIDAQLSQSHHILRSYA SQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ
Sbjct: 61  PIDQLPMIDAQLSQSHHILRSYA-SQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120

Query: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH 180
           LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH
Sbjct: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH 180

Query: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240
           DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV
Sbjct: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240

Query: 241 LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 300
           LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK
Sbjct: 241 LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 300

Query: 301 R 302
           R
Sbjct: 301 R 300

[Close]

BLAST of CSPI05G05970 vs. ExPASy TrEMBL
Match: A0A6J1H546 (homeobox protein knotted-1-like 7 OS=Cucurbita moschata OX=3662 GN=LOC111459669 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 8.9e-149
Identity = 277/306 (90.52%), Postives = 292/306 (95.42%), Query Frame = 0


Query: 1   MQEPGLGMMT-----AAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVAC 60
           MQEPGLGMMT     AA  S+  LSGDVS+SG+   N+QLKAEIATHPLYEQLL+AHVAC
Sbjct: 1   MQEPGLGMMTAAAAAAAAASTAALSGDVSISGD---NAQLKAEIATHPLYEQLLAAHVAC 60

Query: 61  LRVATPIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLC 120
           LRVATPIDQLP+IDAQL+QSHH+LRSYA SQQHHQ+AHSL+PHERQELDNFLAQYMIVLC
Sbjct: 61  LRVATPIDQLPIIDAQLAQSHHVLRSYA-SQQHHQHAHSLSPHERQELDNFLAQYMIVLC 120

Query: 121 SFKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQS 180
           SFK+QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEG+GATMSDD+DD+PM+FSLDQS
Sbjct: 121 SFKDQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQS 180

Query: 181 GADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPG 240
           G DAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPG
Sbjct: 181 GGDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPG 240

Query: 241 DTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSL 300
           DTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSL
Sbjct: 241 DTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSL 300

Query: 301 KSKRKR 302
           KSKRKR
Sbjct: 301 KSKRKR 302

[Close]

BLAST of CSPI05G05970 vs. ExPASy TrEMBL
Match: A0A6J1K9A9 (homeobox protein knotted-1-like 7 OS=Cucurbita maxima OX=3661 GN=LOC111491278 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.4e-146
Identity = 274/305 (89.84%), Postives = 292/305 (95.74%), Query Frame = 0


Query: 1   MQEPGLGMMT---AAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLR 60
           MQEPGLG+MT   AA  S+  LSGDVS+SG+   N+QLKAEIATHPLYEQLL+AHVACLR
Sbjct: 1   MQEPGLGVMTAAAAAAASTAALSGDVSISGD---NAQLKAEIATHPLYEQLLAAHVACLR 60

Query: 61  VATPIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSF 120
           VATPIDQLP+IDAQL+QSHH+LRSYA SQQHHQ+AHSL+PH+RQELDNFLAQYMIVLCSF
Sbjct: 61  VATPIDQLPIIDAQLAQSHHVLRSYA-SQQHHQHAHSLSPHDRQELDNFLAQYMIVLCSF 120

Query: 121 KEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMS-DDEDDIPMDFSLDQSG 180
           K+QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEG+GATMS DD+DD+P++FSLDQSG
Sbjct: 121 KDQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDDVPIEFSLDQSG 180

Query: 181 ADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD 240
            DAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD
Sbjct: 181 GDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD 240

Query: 241 TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK 300
           TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK
Sbjct: 241 TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK 300

Query: 301 SKRKR 302
           SKRKR
Sbjct: 301 SKRKR 301

[Close]

BLAST of CSPI05G05970 vs. ExPASy TrEMBL
Match: A0A6P3YVU8 (homeobox protein knotted-1-like 7 OS=Ziziphus jujuba OX=326968 GN=LOC107405822 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.7e-145
Identity = 276/305 (90.49%), Postives = 284/305 (93.11%), Query Frame = 0


Query: 1   MQEPGLGMMTAAGGSSGGLSGDVSV-SGEGV---HNSQLKAEIATHPLYEQLLSAHVACL 60
           MQEPGLGMM AAG   GGL G+VS+ SG GV    + QLKAEIATHPLYEQLLSAHVACL
Sbjct: 1   MQEPGLGMMAAAG---GGLGGEVSISSGGGVGGDQHRQLKAEIATHPLYEQLLSAHVACL 60

Query: 61  RVATPIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCS 120
           RVATPIDQLP+IDAQLSQSHH+LRSYAS Q  HQ  HSL PHERQELDNFLAQY+IVLCS
Sbjct: 61  RVATPIDQLPLIDAQLSQSHHLLRSYASHQ--HQQPHSLPPHERQELDNFLAQYLIVLCS 120

Query: 121 FKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSG 180
           FKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDED++ MDFSLDQSG
Sbjct: 121 FKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDELQMDFSLDQSG 180

Query: 181 ADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD 240
            D HDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD
Sbjct: 181 GDGHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGD 240

Query: 241 TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK 300
           TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK
Sbjct: 241 TTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLK 300

Query: 301 SKRKR 302
           SKRKR
Sbjct: 301 SKRKR 300

[Close]

BLAST of CSPI05G05970 vs. NCBI nr
Match: XP_004143939.1 (homeobox protein knotted-1-like 7 [Cucumis sativus] >KGN50155.1 hypothetical protein Csa_000116 [Cucumis sativus])

HSP 1 Score: 588.6 bits (1516), Expect = 3.1e-164
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60
           MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT
Sbjct: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60

Query: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120
           PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ
Sbjct: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120

Query: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH 180
           LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH
Sbjct: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH 180

Query: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240
           DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV
Sbjct: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240

Query: 241 LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 300
           LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK
Sbjct: 241 LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 300

Query: 301 R 302
           R
Sbjct: 301 R 301

[Close]

BLAST of CSPI05G05970 vs. NCBI nr
Match: XP_038875957.1 (homeobox protein knotted-1-like 7 [Benincasa hispida])

HSP 1 Score: 583.2 bits (1502), Expect = 1.3e-162
Identity = 297/301 (98.67%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60
           MQEPGLGMMTAAGGSSG LSGDVSVSGEGVHN QLKAEIATHPLYEQLLSAHVACLRVAT
Sbjct: 1   MQEPGLGMMTAAGGSSGALSGDVSVSGEGVHNGQLKAEIATHPLYEQLLSAHVACLRVAT 60

Query: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120
           PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ
Sbjct: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120

Query: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH 180
           LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDD+DD+PMDFSLDQSGADAH
Sbjct: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDDDDVPMDFSLDQSGADAH 180

Query: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240
           DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV
Sbjct: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240

Query: 241 LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 300
           LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK
Sbjct: 241 LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 300

Query: 301 R 302
           R
Sbjct: 301 R 301

[Close]

BLAST of CSPI05G05970 vs. NCBI nr
Match: XP_008437194.1 (PREDICTED: homeobox protein knotted-1-like 7 [Cucumis melo])

HSP 1 Score: 582.4 bits (1500), Expect = 2.2e-162
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60
           MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT
Sbjct: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60

Query: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120
           PIDQLPMIDAQLSQSHHILRSYA SQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ
Sbjct: 61  PIDQLPMIDAQLSQSHHILRSYA-SQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120

Query: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH 180
           LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH
Sbjct: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGADAH 180

Query: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240
           DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV
Sbjct: 181 DMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTV 240

Query: 241 LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 300
           LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK
Sbjct: 241 LKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 300

Query: 301 R 302
           R
Sbjct: 301 R 300

[Close]

BLAST of CSPI05G05970 vs. NCBI nr
Match: KAG6606131.1 (Homeobox protein knotted-1-like 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 537.3 bits (1383), Expect = 8.2e-149
Identity = 277/304 (91.12%), Postives = 293/304 (96.38%), Query Frame = 0


Query: 1   MQEPGLGMMT---AAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLR 60
           MQEPGLGMMT   AA  S+  LSGDVS+SG+   N+QLKAEIATHPLYEQLL+AHVACLR
Sbjct: 1   MQEPGLGMMTAAAAAAASTAALSGDVSISGD---NAQLKAEIATHPLYEQLLAAHVACLR 60

Query: 61  VATPIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSF 120
           VATPIDQLP+IDAQL+QSHH+LRSYA SQQHHQ+AHSL+PHERQELDNFLAQYMIVLCSF
Sbjct: 61  VATPIDQLPIIDAQLAQSHHVLRSYA-SQQHHQHAHSLSPHERQELDNFLAQYMIVLCSF 120

Query: 121 KEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGA 180
           K+QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEG+GATMSDD+DD+PM+FSLDQSG+
Sbjct: 121 KDQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQSGS 180

Query: 181 DAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT 240
           DAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT
Sbjct: 181 DAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT 240

Query: 241 TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS 300
           TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS
Sbjct: 241 TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS 300

Query: 301 KRKR 302
           KRKR
Sbjct: 301 KRKR 300

[Close]

BLAST of CSPI05G05970 vs. NCBI nr
Match: XP_022958449.1 (homeobox protein knotted-1-like 7 [Cucurbita moschata])

HSP 1 Score: 536.2 bits (1380), Expect = 1.8e-148
Identity = 277/306 (90.52%), Postives = 292/306 (95.42%), Query Frame = 0


Query: 1   MQEPGLGMMT-----AAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVAC 60
           MQEPGLGMMT     AA  S+  LSGDVS+SG+   N+QLKAEIATHPLYEQLL+AHVAC
Sbjct: 1   MQEPGLGMMTAAAAAAAAASTAALSGDVSISGD---NAQLKAEIATHPLYEQLLAAHVAC 60

Query: 61  LRVATPIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLC 120
           LRVATPIDQLP+IDAQL+QSHH+LRSYA SQQHHQ+AHSL+PHERQELDNFLAQYMIVLC
Sbjct: 61  LRVATPIDQLPIIDAQLAQSHHVLRSYA-SQQHHQHAHSLSPHERQELDNFLAQYMIVLC 120

Query: 121 SFKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQS 180
           SFK+QLQQHVRVHAVEAVMACREIENTLQALTGVSLGEG+GATMSDD+DD+PM+FSLDQS
Sbjct: 121 SFKDQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGSGATMSDDDDDVPMEFSLDQS 180

Query: 181 GADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPG 240
           G DAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPG
Sbjct: 181 GGDAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPG 240

Query: 241 DTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSL 300
           DTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSL
Sbjct: 241 DTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSL 300

Query: 301 KSKRKR 302
           KSKRKR
Sbjct: 301 KSKRKR 302

[Close]

BLAST of CSPI05G05970 vs. TAIR 10
Match: AT1G62990.1 (KNOTTED-like homeobox of Arabidopsis thaliana 7 )

HSP 1 Score: 455.3 bits (1170), Expect = 3.8e-128
Identity = 239/303 (78.88%), Postives = 261/303 (86.14%), Query Frame = 0


Query: 1   MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVAT 60
           MQE  LGMM    G++ G  GD +V  E   N QLK EIATHP+YEQLL+AHVACLRVAT
Sbjct: 1   MQEAALGMM----GATVGGDGDTAVVAE--QNRQLKGEIATHPMYEQLLAAHVACLRVAT 60

Query: 61  PIDQLPMIDAQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQ 120
           PIDQLP+I+AQLSQSHH+LRSYAS+   +        H+R ELDNFLAQY++VLCSFKEQ
Sbjct: 61  PIDQLPIIEAQLSQSHHLLRSYASTAVGYH-------HDRHELDNFLAQYVMVLCSFKEQ 120

Query: 121 LQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGAD-- 180
           LQQHVRVHAVEAVMACREIEN L +LTG +LGEG+GATMS+DEDD+PMDFS D SG D  
Sbjct: 121 LQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFS 180

Query: 181 -AHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDT 240
             HDM GFGPLLPTESERSLMERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDT
Sbjct: 181 GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDT 240

Query: 241 TTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKS 300
           TTVLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKS
Sbjct: 241 TTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKS 290

[Close]

BLAST of CSPI05G05970 vs. TAIR 10
Match: AT5G25220.2 (KNOTTED1-like homeobox gene 3 )

HSP 1 Score: 367.1 bits (941), Expect = 1.4e-101
Identity = 195/293 (66.55%), Postives = 232/293 (79.18%), Query Frame = 0


Query: 13  GGSSGGLSGDVSVSGEGV---HNSQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPMID 72
           GG      G  + + +GV    N++ KAEI +HPLYEQLLSAHVACLR+ATP+DQLP ID
Sbjct: 134 GGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRID 193

Query: 73  AQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHA 132
           AQL+QS H++  Y++     Q        + +ELD F+  Y+++LCSFKEQLQQHVRVHA
Sbjct: 194 AQLAQSQHVVAKYSALGAAAQGLVG----DDKELDQFMTHYVLLLCSFKEQLQQHVRVHA 253

Query: 133 VEAVMACREIENTLQALTGVSLGEGTGATMSDDEDD-IPMDFSLDQSGADAHDMMGFGPL 192
           +EAVMAC EIE +LQ+LTGVS GEG GATMSDDED+ +  D ++   G    D++GFGPL
Sbjct: 254 MEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGL---DVLGFGPL 313

Query: 193 LPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQH 252
           +PTESERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ H
Sbjct: 314 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSH 373

Query: 253 SKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 302
           SKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN  S T LK+KRKR
Sbjct: 374 SKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRKR 419

[Close]

BLAST of CSPI05G05970 vs. TAIR 10
Match: AT5G25220.1 (KNOTTED1-like homeobox gene 3 )

HSP 1 Score: 365.5 bits (937), Expect = 4.0e-101
Identity = 194/292 (66.44%), Postives = 231/292 (79.11%), Query Frame = 0


Query: 13  GGSSGGLSGDVSVSGEGV---HNSQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPMID 72
           GG      G  + + +GV    N++ KAEI +HPLYEQLLSAHVACLR+ATP+DQLP ID
Sbjct: 134 GGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRID 193

Query: 73  AQLSQSHHILRSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHA 132
           AQL+QS H++  Y++     Q        + +ELD F+  Y+++LCSFKEQLQQHVRVHA
Sbjct: 194 AQLAQSQHVVAKYSALGAAAQGLVG----DDKELDQFMTHYVLLLCSFKEQLQQHVRVHA 253

Query: 133 VEAVMACREIENTLQALTGVSLGEGTGATMSDDEDD-IPMDFSLDQSGADAHDMMGFGPL 192
           +EAVMAC EIE +LQ+LTGVS GEG GATMSDDED+ +  D ++   G    D++GFGPL
Sbjct: 254 MEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGL---DVLGFGPL 313

Query: 193 LPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQH 252
           +PTESERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTT+VLK WWQ H
Sbjct: 314 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSH 373

Query: 253 SKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 301
           SKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN  S T LK+KRK
Sbjct: 374 SKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRK 418

[Close]

BLAST of CSPI05G05970 vs. TAIR 10
Match: AT5G11060.1 (KNOTTED1-like homeobox gene 4 )

HSP 1 Score: 364.4 bits (934), Expect = 8.9e-101
Identity = 188/275 (68.36%), Postives = 225/275 (81.82%), Query Frame = 0


Query: 32  NSQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPMIDAQLSQSHHILRSYASSQQHHQN 91
           N++ KAEI +HPLYEQLLSAHVACLR+ATP+DQLP IDAQL+QS +++  Y++ +     
Sbjct: 120 NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEA---- 179

Query: 92  AHSLTPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHAVEAVMACREIENTLQALTGVSL 151
           A  L   + +ELD+F+  Y+++LCSFKEQLQQHVRVHA+EAVMAC EIE +LQ+ TGVS 
Sbjct: 180 AQGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSP 239

Query: 152 GEGTGATMSDDEDDIPMDFSLDQSGADAH------DMMGFGPLLPTESERSLMERVRQEL 211
           GEGTGATMS+DED        +Q  +DAH      D +GFGPL+PTESERSLMERVRQEL
Sbjct: 240 GEGTGATMSEDED--------EQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQEL 299

Query: 212 KIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEE 271
           K ELKQG+K +I D+REEILRKRRAGKLPGDTT+VLK+WWQ HSKWPYPTE+DKA+LV+E
Sbjct: 300 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQE 359

Query: 272 TGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 301
           TGLQLKQINNWFINQRKRNWHSN  S T  K+KR+
Sbjct: 360 TGLQLKQINNWFINQRKRNWHSNPSSSTVSKNKRR 382

[Close]

BLAST of CSPI05G05970 vs. TAIR 10
Match: AT4G32040.1 (KNOTTED1-like homeobox gene 5 )

HSP 1 Score: 338.6 bits (867), Expect = 5.2e-93
Identity = 178/281 (63.35%), Postives = 218/281 (77.58%), Query Frame = 0


Query: 25  VSGEGVHNSQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPMIDAQLSQSHHILRSYAS 84
           V GE   ++  KA I  HP+YEQLL+AHVACLRVATP+DQ+P IDAQLSQ H +   Y++
Sbjct: 108 VGGEDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYST 167

Query: 85  SQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHAVEAVMACREIENTLQ 144
                 N         +ELD+F++ Y+++LCSFKEQLQ HV VHA+EA+ AC EIE +LQ
Sbjct: 168 LGVVVDN---------KELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQ 227

Query: 145 ALTGVSLGEGTGATMSDDEDD--IPMDFSLDQSGADAHD-MMGFGPLLPTESERSLMERV 204
           +LTGVS  E  G TMSDDEDD  +  + ++     D  D +MGFGPL+PTE ERSLMERV
Sbjct: 228 SLTGVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERV 287

Query: 205 RQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAK 264
           ++ELK ELKQGFK +I D+REEI+RKRRAGKLPGDTT+VLK WW+ HSKWPYPTE+DKAK
Sbjct: 288 KKELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAK 347

Query: 265 LVEETGLQLKQINNWFINQRKRNWHSNSQSVTSL-KSKRKR 302
           LV+ETGLQLKQINNWFINQRKRNW+SNS + ++L K+KRKR
Sbjct: 348 LVQETGLQLKQINNWFINQRKRNWNSNSSTSSTLTKNKRKR 379

The following BLAST results are available for this feature:

BLAST of CSPI05G05970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPQ8	5.4e-127	78.88	Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana OX=3702 GN=KNAT7 PE=1 ...	[more]
P46606	9.2e-127	78.55	Homeobox protein HD1 OS=Brassica napus OX=3708 GN=HD1 PE=2 SV=1	[more]
Q94LW3	6.4e-112	70.10	Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=HO...	[more]
O04136	3.0e-101	67.24	Homeobox protein knotted-1-like 3 OS=Malus domestica OX=3750 PE=2 SV=1	[more]
P48000	5.6e-100	66.44	Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana OX=3702 GN=KNAT3 PE=1 ...	[more]

BLAST of CSPI05G05970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKD3	1.5e-164	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G156150 PE=3 SV=1	[more]
A0A1S3ATE3	1.1e-162	99.67	homeobox protein knotted-1-like 7 OS=Cucumis melo OX=3656 GN=LOC103482695 PE=3 S...	[more]
A0A6J1H546	8.9e-149	90.52	homeobox protein knotted-1-like 7 OS=Cucurbita moschata OX=3662 GN=LOC111459669 ...	[more]
A0A6J1K9A9	2.4e-146	89.84	homeobox protein knotted-1-like 7 OS=Cucurbita maxima OX=3661 GN=LOC111491278 PE...	[more]
A0A6P3YVU8	2.7e-145	90.49	homeobox protein knotted-1-like 7 OS=Ziziphus jujuba OX=326968 GN=LOC107405822 P...	[more]

BLAST of CSPI05G05970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143939.1	3.1e-164	100.00	homeobox protein knotted-1-like 7 [Cucumis sativus] >KGN50155.1 hypothetical pro...	[more]
XP_038875957.1	1.3e-162	98.67	homeobox protein knotted-1-like 7 [Benincasa hispida]	[more]
XP_008437194.1	2.2e-162	99.67	PREDICTED: homeobox protein knotted-1-like 7 [Cucumis melo]	[more]
KAG6606131.1	8.2e-149	91.12	Homeobox protein knotted-1-like 7, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022958449.1	1.8e-148	90.52	homeobox protein knotted-1-like 7 [Cucurbita moschata]	[more]

BLAST of CSPI05G05970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62990.1	3.8e-128	78.88	KNOTTED-like homeobox of Arabidopsis thaliana 7	[more]
AT5G25220.2	1.4e-101	66.55	KNOTTED1-like homeobox gene 3	[more]
AT5G25220.1	4.0e-101	66.44	KNOTTED1-like homeobox gene 3	[more]
AT5G11060.1	8.9e-101	68.36	KNOTTED1-like homeobox gene 4	[more]
AT4G32040.1	5.2e-93	63.35	KNOTTED1-like homeobox gene 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 226..291 e-value: 1.4E-10 score: 51.2
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 224..287 score: 11.677235
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 227..288 e-value: 6.47861E-12 score: 57.6385
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 33..77 e-value: 2.5E-19 score: 80.2
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 35..76 e-value: 1.8E-18 score: 66.0
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 93..148 e-value: 1.9E-24 score: 97.2
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 97..147 e-value: 7.5E-18 score: 63.8
IPR008422	Homeobox KN domain	PFAM	PF05920	Homeobox_KN	coord: 244..283 e-value: 1.5E-17 score: 63.2
None	No IPR available	GENE3D	1.10.10.60		coord: 223..297 e-value: 2.1E-25 score: 90.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR11850:SF315	HOMEOBOX PROTEIN KNOTTED-1-LIKE 7	coord: 2..301
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 2..301
IPR005539	ELK domain	PROSITE	PS51213	ELK	coord: 204..224 score: 9.131822
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 226..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G05970.1	CSPI05G05970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010192	mucilage biosynthetic process
biological_process	GO:0080001	mucilage extrusion from seed coat
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:2000652	regulation of secondary cell wall biogenesis
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0010214	seed coat development
biological_process	GO:0080112	seed growth
biological_process	GO:0010089	xylem development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding