CSPI05G04790 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G04790
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	arabinogalactan peptide 22-like
Location	Chr5: 4588372 .. 4589528 (+)
RNA-Seq Expression	CSPI05G04790
Synteny	CSPI05G04790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTATATTGATCCATGATAGACTATTTGAAGAAAATCCAATAAAAGGGTATGAAAAGGGCGATTTAAACGGACATGGCAGTTGGTAGTTACAACATTCCAAAGCAAATGAGGCTATAAAATCCATAGCCCCATTGATTGAGAAGCAGACCGCCATTGCCACGCCGTCGTTCTTCTACACAGGGACTGTCAAATTGGAGGGTTTGGCTAGCCCTCTCCCCCCATCCCCTTTTGACAGTTTCAAATCATTTATCAATTCACGGCCTAAATACACTTTAATTTTCTAATAATATCTCTCTCTGCTACGCCTCTCCGGACCTTTTCTTCTTAACCTTTTCAATTCTTGAGAGACGTTGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGTGAGAGAGATCTCATTCCTTCTTCCTTTACTAATTTTCCATTACAAGCTTCTCCTTTTTTTTCAACATGGCGGTCGTTGCTTGTAAGGTCCCTTTTGGTGGCATTTTGTTTGTTGTTGCTTTAGTTTTGACCAGGCTTTCCTCTGCTTATGCTCAATCGTTGTCTCCGGCTCAACCACCTGCTACTGGCGATGGTAACTTCTTCATCTTCGTCTGATCATTTTTTAACCACACTTTTTATAACCATTTTTGTTCATCTTAACTGATGGAAAATTGTTGTAATTTTGATTTGTAGGAACAAGCATAGATCAGGGGATTGCCTATGTATTGATGTTGTTGGCGTTGGTGCTCACCTACATTATCCATTCAGCGGATCTTTACGTCAGTTTATAAATTCCTTCACAAAACTAATTCAGATTCAGATTCAGATTTCAAATGGGGTTGAAGAATTTATGATAGGAAAATATGATCTCATGGACTAAACTTTACATGTAAATTAATGAAAATGATGATTTCTTTTACCTCAATGGTGGATTTTTCTTGTCCATCTTCCCTTGTCAGTTTTGTTTCTTTTTAAATTAACTATTGTTAATAAAGCAGACATTTTTAGCGTTCATGTCATATTTATTAGAACAATTGTTGAATAGATAAAAAAAGGCCGTCGTGTCGGTGCCATGTTGGTCCAAGAGACCAACTTAAATATTGTGCTTAGCATAACAGATTAGAATGATTGAACGAAACAAACATAATTGATATCCATAAGCTTC

mRNA sequence

GCTATATTGATCCATGATAGACTATTTGAAGAAAATCCAATAAAAGGGTATGAAAAGGGCGATTTAAACGGACATGGCAGTTGGTAGTTACAACATTCCAAAGCAAATGAGGCTATAAAATCCATAGCCCCATTGATTGAGAAGCAGACCGCCATTGCCACGCCGTCGTTCTTCTACACAGGGACTGTCAAATTGGAGGGTTTGGCTAGCCCTCTCCCCCCATCCCCTTTTGACAGTTTCAAATCATTTATCAATTCACGGCCTAAATACACTTTAATTTTCTAATAATATCTCTCTCTGCTACGCCTCTCCGGACCTTTTCTTCTTAACCTTTTCAATTCTTGAGAGACGTTGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGTGAGAGAGATCTCATTCCTTCTTCCTTTACTAATTTTCCATTACAAGCTTCTCCTTTTTTTTCAACATGGCGGTCGTTGCTTGTAAGGTCCCTTTTGGTGGCATTTTGTTTGTTGTTGCTTTAGTTTTGACCAGGCTTTCCTCTGCTTATGCTCAATCGTTGTCTCCGGCTCAACCACCTGCTACTGGCGATGGAACAAGCATAGATCAGGGGATTGCCTATGTATTGATGTTGTTGGCGTTGGTGCTCACCTACATTATCCATTCAGCGGATCTTTACGTCAGTTTATAAATTCCTTCACAAAACTAATTCAGATTCAGATTCAGATTTCAAATGGGGTTGAAGAATTTATGATAGGAAAATATGATCTCATGGACTAAACTTTACATGTAAATTAATGAAAATGATGATTTCTTTTACCTCAATGGTGGATTTTTCTTGTCCATCTTCCCTTGTCAGTTTTGTTTCTTTTTAAATTAACTATTGTTAATAAAGCAGACATTTTTAGCGTTCATGTCATATTTATTAGAACAATTGTTGAATAGATAAAAAAAGGCCGTCGTGTCGGTGCCATGTTGGTCCAAGAGACCAACTTAAATATTGTGCTTAGCATAACAGATTAGAATGATTGAACGAAACAAACATAATTGATATCCATAAGCTTC

Coding sequence (CDS)

ATGGCGGTCGTTGCTTGTAAGGTCCCTTTTGGTGGCATTTTGTTTGTTGTTGCTTTAGTTTTGACCAGGCTTTCCTCTGCTTATGCTCAATCGTTGTCTCCGGCTCAACCACCTGCTACTGGCGATGGAACAAGCATAGATCAGGGGATTGCCTATGTATTGATGTTGTTGGCGTTGGTGCTCACCTACATTATCCATTCAGCGGATCTTTACGTCAGTTTATAA

Protein sequence

MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL*

Homology

[Close]

BLAST of CSPI05G04790 vs. ExPASy Swiss-Prot
Match: O82337 (Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-08
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 15 FVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD 70
          FV A++   LS A AQSL+PA P  T DGTSIDQGIAY+LM++ALVLTY+IH  D
Sbjct: 15 FVFAVI---LSLAGAQSLAPA-PAPTSDGTSIDQGIAYLLMVVALVLTYLIHPLD 65

[Close]

BLAST of CSPI05G04790 vs. ExPASy Swiss-Prot
Match: Q8L9T8 (Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.8e-08
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 10 FGGILFVVALVLT-RLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIH 67
          F G+  +V+++    L  A+AQS +PA P  T DGT+IDQGIAYVLML+ALVLTY+IH
Sbjct: 7  FFGVSTIVSIIFAILLPMAHAQSAAPA-PAPTSDGTTIDQGIAYVLMLVALVLTYLIH 63

[Close]

BLAST of CSPI05G04790 vs. ExPASy Swiss-Prot
Match: Q9M373 (Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-07
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 13 ILFVVALVLTRLSS-AYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD 70
          ++ + A V   +S  A AQSL+PA P  T DGTSIDQGIAY+LM++ALVLTY+IH  D
Sbjct: 9  VIALFAFVFAVISPFAGAQSLAPA-PSPTSDGTSIDQGIAYLLMVVALVLTYLIHPLD 65

[Close]

BLAST of CSPI05G04790 vs. ExPASy Swiss-Prot
Match: Q9FK16 (Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.6e-06
Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 3  VVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLT 62
          + + K P   +   V + +  L  A + S SPA P  T DGTSIDQGIAYVLM++AL LT
Sbjct: 1  MASLKFPLEILAVFVIISVILLPIAQSHSSSPA-PAPTSDGTSIDQGIAYVLMMVALALT 60

Query: 63 YIIH 67
          Y IH
Sbjct: 61 YFIH 63

[Close]

BLAST of CSPI05G04790 vs. ExPASy TrEMBL
Match: A0A0A0KK44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151510 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.9e-29
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALV 60
          MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALV
Sbjct: 1  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALV 60

Query: 61 LTYIIHSADLYVSL 75
          LTYIIHSADLYVSL
Sbjct: 61 LTYIIHSADLYVSL 74

[Close]

BLAST of CSPI05G04790 vs. ExPASy TrEMBL
Match: A0A5D3C2F1 (Arabinogalactan peptide 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002020 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.6e-25
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALV 60
          MAVVACK+PF GILFVVALVLTRLS A AQSLSPAQPPAT DGTSIDQGIAY LMLLALV
Sbjct: 1  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALV 60

Query: 61 LTYIIHSADLYVSL 75
          LTYIIHSAD YVSL
Sbjct: 61 LTYIIHSADRYVSL 74

[Close]

BLAST of CSPI05G04790 vs. ExPASy TrEMBL
Match: A0A1S3ATI9 (arabinogalactan peptide 22-like OS=Cucumis melo OX=3656 GN=LOC103482805 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.6e-25
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALV 60
          MAVVACK+PF GILFVVALVLTRLS A AQSLSPAQPPAT DGTSIDQGIAY LMLLALV
Sbjct: 1  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALV 60

Query: 61 LTYIIHSADLYVSL 75
          LTYIIHSAD YVSL
Sbjct: 61 LTYIIHSADRYVSL 74

[Close]

BLAST of CSPI05G04790 vs. ExPASy TrEMBL
Match: A0A6J1K4A3 (arabinogalactan peptide 22-like OS=Cucurbita maxima OX=3661 GN=LOC111491553 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.8e-11
Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 1  MAVVA-CKVPFGGILFVVALVLTRL--SSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLL 60
          M VVA  KVP+ G+L  VA VL  L  +SA   SLSPAQPP   DGTS+DQGIAYVLMLL
Sbjct: 1  MEVVAYIKVPY-GVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLL 60

Query: 61 ALVLTYIIHSADLYVSL 75
          AL+LTYIIH A+L +SL
Sbjct: 61 ALLLTYIIHLAELPISL 76

[Close]

BLAST of CSPI05G04790 vs. ExPASy TrEMBL
Match: A0A6J1CXM0 (arabinogalactan peptide 22-like OS=Momordica charantia OX=3673 GN=LOC111015367 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-10
Identity = 41/61 (67.21%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 13 ILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYV 72
          + FV+   L   + A  +S+SPAQP AT DGTSIDQGIAY LMLLALVLTYIIHSADL +
Sbjct: 19 VAFVLGAFLPVQAHAQPESMSPAQPLATSDGTSIDQGIAYALMLLALVLTYIIHSADLSI 78

Query: 73 S 74
          S
Sbjct: 79 S 79

[Close]

BLAST of CSPI05G04790 vs. NCBI nr
Match: XP_004143956.1 (arabinogalactan protein 41 [Cucumis sativus] >KGN50035.1 hypothetical protein Csa_000543 [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 8.1e-29
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALV 60
          MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALV
Sbjct: 1  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALV 60

Query: 61 LTYIIHSADLYVSL 75
          LTYIIHSADLYVSL
Sbjct: 61 LTYIIHSADLYVSL 74

[Close]

BLAST of CSPI05G04790 vs. NCBI nr
Match: XP_008437371.1 (PREDICTED: arabinogalactan peptide 22-like [Cucumis melo] >KAA0042697.1 arabinogalactan peptide 22-like [Cucumis melo var. makuwa] >TYK06101.1 arabinogalactan peptide 22-like [Cucumis melo var. makuwa])

HSP 1 Score: 122.5 bits (306), Expect = 1.6e-24
Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALV 60
          MAVVACK+PF GILFVVALVLTRLS A AQSLSPAQPPAT DGTSIDQGIAY LMLLALV
Sbjct: 1  MAVVACKIPFSGILFVVALVLTRLSPACAQSLSPAQPPATSDGTSIDQGIAYALMLLALV 60

Query: 61 LTYIIHSADLYVSL 75
          LTYIIHSAD YVSL
Sbjct: 61 LTYIIHSADRYVSL 74

[Close]

BLAST of CSPI05G04790 vs. NCBI nr
Match: KAG7017004.1 (Arabinogalactan peptide 16 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 94.0 bits (232), Expect = 6.0e-16
Identity = 54/73 (73.97%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 1  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALV 60
          MAVVA K+PF G+ F V  VL  +  A AQSL+PAQPPA  DGTSIDQGIAYVLMLLALV
Sbjct: 1  MAVVANKIPF-GVFFGVVFVLAMILPACAQSLAPAQPPAASDGTSIDQGIAYVLMLLALV 60

Query: 61 LTYIIHSADLYVS 74
          LTYIIHSADL +S
Sbjct: 61 LTYIIHSADLSIS 72

[Close]

BLAST of CSPI05G04790 vs. NCBI nr
Match: KAG6579545.1 (Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 93.2 bits (230), Expect = 1.0e-15
Identity = 55/76 (72.37%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 1  MAVVACKVPFG---GILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLL 60
          MAVVA K+PFG   G++FV+A++L     A AQSL+PAQPPA  DGTSIDQGIAYVLMLL
Sbjct: 1  MAVVANKIPFGVFIGVVFVLAMLL----PACAQSLAPAQPPAASDGTSIDQGIAYVLMLL 60

Query: 61 ALVLTYIIHSADLYVS 74
          ALVLTYIIHSADL +S
Sbjct: 61 ALVLTYIIHSADLSIS 72

[Close]

BLAST of CSPI05G04790 vs. NCBI nr
Match: XP_022996281.1 (arabinogalactan peptide 22-like [Cucurbita maxima])

HSP 1 Score: 77.4 bits (189), Expect = 5.8e-11
Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 1  MAVVA-CKVPFGGILFVVALVLTRL--SSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLL 60
          M VVA  KVP+ G+L  VA VL  L  +SA   SLSPAQPP   DGTS+DQGIAYVLMLL
Sbjct: 1  MEVVAYIKVPY-GVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLL 60

Query: 61 ALVLTYIIHSADLYVSL 75
          AL+LTYIIH A+L +SL
Sbjct: 61 ALLLTYIIHLAELPISL 76

[Close]

BLAST of CSPI05G04790 vs. TAIR 10
Match: AT2G46330.1 (arabinogalactan protein 16 )

HSP 1 Score: 60.1 bits (144), Expect = 8.9e-10
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 15 FVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD 70
          FV A++   LS A AQSL+PA P  T DGTSIDQGIAY+LM++ALVLTY+IH  D
Sbjct: 15 FVFAVI---LSLAGAQSLAPA-PAPTSDGTSIDQGIAYLLMVVALVLTYLIHPLD 65

[Close]

BLAST of CSPI05G04790 vs. TAIR 10
Match: AT5G24105.1 (arabinogalactan protein 41 )

HSP 1 Score: 58.2 bits (139), Expect = 3.4e-09
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 10 FGGILFVVALVLT-RLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIH 67
          F G+  +V+++    L  A+AQS +PA P  T DGT+IDQGIAYVLML+ALVLTY+IH
Sbjct: 7  FFGVSTIVSIIFAILLPMAHAQSAAPA-PAPTSDGTTIDQGIAYVLMLVALVLTYLIH 63

[Close]

BLAST of CSPI05G04790 vs. TAIR 10
Match: AT3G61640.1 (arabinogalactan protein 20 )

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-08
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 13 ILFVVALVLTRLSS-AYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD 70
          ++ + A V   +S  A AQSL+PA P  T DGTSIDQGIAY+LM++ALVLTY+IH  D
Sbjct: 9  VIALFAFVFAVISPFAGAQSLAPA-PSPTSDGTSIDQGIAYLLMVVALVLTYLIHPLD 65

[Close]

BLAST of CSPI05G04790 vs. TAIR 10
Match: AT5G53250.1 (arabinogalactan protein 22 )

HSP 1 Score: 50.8 bits (120), Expect = 5.4e-07
Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 3  VVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLT 62
          + + K P   +   V + +  L  A + S SPA P  T DGTSIDQGIAYVLM++AL LT
Sbjct: 1  MASLKFPLEILAVFVIISVILLPIAQSHSSSPA-PAPTSDGTSIDQGIAYVLMMVALALT 60

Query: 63 YIIH 67
          Y IH
Sbjct: 61 YFIH 63

The following BLAST results are available for this feature:

BLAST of CSPI05G04790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82337	1.3e-08	65.45	Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1	[more]
Q8L9T8	4.8e-08	58.62	Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1	[more]
Q9M373	1.8e-07	58.62	Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1	[more]
Q9FK16	7.6e-06	50.00	Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1	[more]

BLAST of CSPI05G04790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK44	3.9e-29	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151510 PE=4 SV=1	[more]
A0A5D3C2F1	7.6e-25	90.54	Arabinogalactan peptide 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3ATI9	7.6e-25	90.54	arabinogalactan peptide 22-like OS=Cucumis melo OX=3656 GN=LOC103482805 PE=4 SV=...	[more]
A0A6J1K4A3	2.8e-11	66.23	arabinogalactan peptide 22-like OS=Cucurbita maxima OX=3661 GN=LOC111491553 PE=4...	[more]
A0A6J1CXM0	2.4e-10	67.21	arabinogalactan peptide 22-like OS=Momordica charantia OX=3673 GN=LOC111015367 P...	[more]

BLAST of CSPI05G04790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143956.1	8.1e-29	100.00	arabinogalactan protein 41 [Cucumis sativus] >KGN50035.1 hypothetical protein Cs...	[more]
XP_008437371.1	1.6e-24	90.54	PREDICTED: arabinogalactan peptide 22-like [Cucumis melo] >KAA0042697.1 arabinog...	[more]
KAG7017004.1	6.0e-16	73.97	Arabinogalactan peptide 16 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6579545.1	1.0e-15	72.37	Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022996281.1	5.8e-11	66.23	arabinogalactan peptide 22-like [Cucurbita maxima]	[more]

BLAST of CSPI05G04790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46330.1	8.9e-10	65.45	arabinogalactan protein 16	[more]
AT5G24105.1	3.4e-09	58.62	arabinogalactan protein 41	[more]
AT3G61640.1	1.3e-08	58.62	arabinogalactan protein 20	[more]
AT5G53250.1	5.4e-07	50.00	arabinogalactan protein 22	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009424	Arabinogalactan protein 16/20/22/41	PFAM	PF06376	AGP	coord: 34..66 e-value: 2.9E-16 score: 59.0
IPR009424	Arabinogalactan protein 16/20/22/41	PANTHER	PTHR33374	ARABINOGALACTAN PROTEIN 20	coord: 1..72
None	No IPR available	PANTHER	PTHR33374:SF38	ARABINOGALACTAN PROTEIN 41	coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G04790.1	CSPI05G04790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane