CSPI05G02830 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGGTGGAGAGGTAATAGCGTGGTTGGCTTTCTGATGTATCAACCCTCTTACAAAGGGAATATGCTGAATTTAGAAAAGTTGGATAGGGACAAGCAGGATAATATAATATGAGAATTATGAGGAGAGGAAAGGAGAAGAAGATACATTGAACCTAGACAGCCAAATGGTGGGGTTTAAGAAGGAGAAGAAGAAAGGGGAGAGAGGGCATTCTGAAACCTGAAGTTAGAGAAAATGGGAGTCCTGAAACCGGGTGGCGTTGAGTCAGTGAGCCTGAAGAGGAGGAATGAGGAGCTGGAGAAGGAACTGGAGGCGAGCCAGGAAAGAGAGCTGATTATGAGGAAGGAGCTGAGAAGGGTTTGTGAAAGGCTAAAGGTGGCAGAGGAGGCGGAGGAGAGACTTTCGTTACAGCTCGGGGAGCTCGAGGCAGAAGCTCTAACCCAGGCACGTGATTACCACCAACAAATCACATCGTTGATGAACCAGCTCTCCCACGCTCATAAACTGCTGCAAGCTGCCTCCATCGCCTCCTTTACTTAGAACAACACAAACTTAACCCGATGTGTTGGAGGCCCTTTTTTTTCCCCCCCCTTCAATACTCCATCGAGTAGATGTAATTTGATCTCTATTTTACTACCATATTCAATATTGTGTCGCTTTTCCCCTGCTTCAAACTTTTGATTGATTCAGGCCATTAGAATCCAATGGTATGGTGTGTTAAGTTTGACCTTCGAGTTTCTTGTTCCGGCAATTTGGATTCTAAACTTCAGCTATTCTTTTTATTCCGCTCAACGTCTTTTAACC GTGGTGGAGAGGTAATAGCGTGGTTGGCTTTCTGATGTATCAACCCTCTTACAAAGGGAATATGCTGAATTTAGAAAAGTTGGATAGGGACAAGCAGGATAATATAATATGAGAATTATGAGGAGAGGAAAGGAGAAGAAGATACATTGAACCTAGACAGCCAAATGGTGGGGTTTAAGAAGGAGAAGAAGAAAGGGGAGAGAGGGCATTCTGAAACCTGAAGTTAGAGAAAATGGGAGTCCTGAAACCGGGTGGCGTTGAGTCAGTGAGCCTGAAGAGGAGGAATGAGGAGCTGGAGAAGGAACTGGAGGCGAGCCAGGAAAGAGAGCTGATTATGAGGAAGGAGCTGAGAAGGGTTTGTGAAAGGCTAAAGGTGGCAGAGGAGGCGGAGGAGAGACTTTCGTTACAGCTCGGGGAGCTCGAGGCAGAAGCTCTAACCCAGGCACGTGATTACCACCAACAAATCACATCGTTGATGAACCAGCTCTCCCACGCTCATAAACTGCTGCAAGCTGCCTCCATCGCCTCCTTTACTTAGAACAACACAAACTTAACCCGATGTGTTGGAGGCCCTTTTTTTTCCCCCCCCTTCAATACTCCATCGAGTAGATGTAATTTGATCTCTATTTTACTACCATATTCAATATTGTGTCGCTTTTCCCCTGCTTCAAACTTTTGATTGATTCAGGCCATTAGAATCCAATGGTATGGTGTGTTAAGTTTGACCTTCGAGTTTCTTGTTCCGGCAATTTGGATTCTAAACTTCAGCTATTCTTTTTATTCCGCTCAACGTCTTTTAACC ATGGGAGTCCTGAAACCGGGTGGCGTTGAGTCAGTGAGCCTGAAGAGGAGGAATGAGGAGCTGGAGAAGGAACTGGAGGCGAGCCAGGAAAGAGAGCTGATTATGAGGAAGGAGCTGAGAAGGGTTTGTGAAAGGCTAAAGGTGGCAGAGGAGGCGGAGGAGAGACTTTCGTTACAGCTCGGGGAGCTCGAGGCAGAAGCTCTAACCCAGGCACGTGATTACCACCAACAAATCACATCGTTGATGAACCAGCTCTCCCACGCTCATAAACTGCTGCAAGCTGCCTCCATCGCCTCCTTTACTTAG MGVLKPGGVESVSLKRRNEELEKELEASQERELIMRKELRRVCERLKVAEEAEERLSLQLGELEAEALTQARDYHQQITSLMNQLSHAHKLLQAASIASFT* Homology
BLAST of CSPI05G02830 vs. ExPASy Swiss-Prot
Match: Q9SCK2 (Protein RESPONSE TO LOW SULFUR 3 OS=Arabidopsis thaliana OX=3702 GN=LSU3 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 6.9e-10 Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of CSPI05G02830 vs. ExPASy Swiss-Prot
Match: Q9FIR9 (Protein RESPONSE TO LOW SULFUR 2 OS=Arabidopsis thaliana OX=3702 GN=LSU2 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.1e-10 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0
BLAST of CSPI05G02830 vs. ExPASy Swiss-Prot
Match: Q8L8S2 (Protein RESPONSE TO LOW SULFUR 4 OS=Arabidopsis thaliana OX=3702 GN=LSU4 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.0e-08 Identity = 40/77 (51.95%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of CSPI05G02830 vs. ExPASy Swiss-Prot
Match: Q9SCK1 (Protein RESPONSE TO LOW SULFUR 1 OS=Arabidopsis thaliana OX=3702 GN=LSU1 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.2e-07 Identity = 40/98 (40.82%), Postives = 58/98 (59.18%), Query Frame = 0
BLAST of CSPI05G02830 vs. ExPASy TrEMBL
Match: A0A0A0KN32 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139070 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 4.2e-42 Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0
BLAST of CSPI05G02830 vs. ExPASy TrEMBL
Match: A0A5A7TLR6 (Ribonuclease Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00160 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.3e-40 Identity = 97/101 (96.04%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of CSPI05G02830 vs. ExPASy TrEMBL
Match: A0A1S3AV51 (uncharacterized protein LOC103482998 OS=Cucumis melo OX=3656 GN=LOC103482998 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.3e-40 Identity = 97/101 (96.04%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of CSPI05G02830 vs. ExPASy TrEMBL
Match: A0A6J1H2Q6 (uncharacterized protein LOC111459164 OS=Cucurbita moschata OX=3662 GN=LOC111459164 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 8.8e-24 Identity = 68/96 (70.83%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of CSPI05G02830 vs. ExPASy TrEMBL
Match: A0A6J1K1F9 (protein RESPONSE TO LOW SULFUR 2-like OS=Cucurbita maxima OX=3661 GN=LOC111491545 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.0e-23 Identity = 67/96 (69.79%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of CSPI05G02830 vs. NCBI nr
Match: XP_011654590.1 (protein RESPONSE TO LOW SULFUR 2 [Cucumis sativus] >KGN49827.1 hypothetical protein Csa_000140 [Cucumis sativus]) HSP 1 Score: 180.3 bits (456), Expect = 8.6e-42 Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0
BLAST of CSPI05G02830 vs. NCBI nr
Match: XP_008437659.1 (PREDICTED: uncharacterized protein LOC103482998 [Cucumis melo] >KAA0042521.1 ribonuclease Y-like [Cucumis melo var. makuwa] >TYK05924.1 ribonuclease Y-like [Cucumis melo var. makuwa]) HSP 1 Score: 174.5 bits (441), Expect = 4.7e-40 Identity = 97/101 (96.04%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of CSPI05G02830 vs. NCBI nr
Match: XP_038875209.1 (protein RESPONSE TO LOW SULFUR 2-like [Benincasa hispida]) HSP 1 Score: 151.8 bits (382), Expect = 3.3e-33 Identity = 84/96 (87.50%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of CSPI05G02830 vs. NCBI nr
Match: KAG6605817.1 (Protein RESPONSE TO LOW SULFUR 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035779.1 Protein RESPONSE TO LOW SULFUR 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 119.4 bits (298), Expect = 1.8e-23 Identity = 68/96 (70.83%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of CSPI05G02830 vs. NCBI nr
Match: XP_022957699.1 (uncharacterized protein LOC111459164 [Cucurbita moschata]) HSP 1 Score: 119.4 bits (298), Expect = 1.8e-23 Identity = 68/96 (70.83%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of CSPI05G02830 vs. TAIR 10
Match: AT3G49570.1 (response to low sulfur 3 ) HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11 Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of CSPI05G02830 vs. TAIR 10
Match: AT5G24660.1 (response to low sulfur 2 ) HSP 1 Score: 64.3 bits (155), Expect = 6.4e-11 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0
BLAST of CSPI05G02830 vs. TAIR 10
Match: AT5G24655.1 (response to low sulfur 4 ) HSP 1 Score: 60.8 bits (146), Expect = 7.1e-10 Identity = 40/77 (51.95%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of CSPI05G02830 vs. TAIR 10
Match: AT3G49580.1 (response to low sulfur 1 ) HSP 1 Score: 55.5 bits (132), Expect = 3.0e-08 Identity = 40/98 (40.82%), Postives = 58/98 (59.18%), Query Frame = 0
BLAST of CSPI05G02830 vs. TAIR 10
Match: AT3G49580.2 (response to low sulfur 1 ) HSP 1 Score: 43.1 bits (100), Expect = 1.5e-04 Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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