Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGAACCCCCTTGAGAGTGTATTGAAAAAACTATCATTTTCTTTTCTTTTTTTAGCTTTCTTTTCCAATGGCTTCAACTTCACACCAAACCTCTTTAGATATGAGTGCATTTTCTTCTTTTATCCGAACAATCAGCCAAAGAAACTATGGACTTGGCTGTTGCTGCACACCATCAAACTGCTTACCAGTTTTCATTAGAATGCAACAAAGCCCTCAAGCAACAGCCGATAGCTCTCAAAAACTTGGCAAGATAATTCTTAGCCTTAGTTTTCAAGCAGTTTTAGCCTTGTTCATTAGCTCACCACCAACTTCCCCTCCTCCACTTTTGATACACTTTTTTGCTGCTGCTGTTTTCATTAGCTTTGCTGTTTCATTTGCTGCTCTTTTCCTTCATAACTCCTTCCCGAGAACCGCCCATTTATTCGAGAAGATTGGTGCGCTTTTTTCTGCATTTGGTGTGTGTTTCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTGGCATGTACCTTCTCCATCATTGTCTTTGCTTTATCATTTAAGTGACATTTTTTAGACATAAAATGGCCATTTCTTTACCCATCCATTAGGCATTTTGTTTGACCTTCTTCCATGGCTCCATCAAGAATAATGAGCTCTCTCTGTATGGATTTTTTTTCCCAGTTGAGATAATATTATTGAAGAAAAAGTTGTTCCCAC
mRNA sequence
GGGAACCCCCTTGAGAGTGTATTGAAAAAACTATCATTTTCTTTTCTTTTTTTAGCTTTCTTTTCCAATGGCTTCAACTTCACACCAAACCTCTTTAGATATGAGTGCATTTTCTTCTTTTATCCGAACAATCAGCCAAAGAAACTATGGACTTGGCTGTTGCTGCACACCATCAAACTGCTTACCAGTTTTCATTAGAATGCAACAAAGCCCTCAAGCAACAGCCGATAGCTCTCAAAAACTTGGCAAGATAATTCTTAGCCTTAGTTTTCAAGCAGTTTTAGCCTTGTTCATTAGCTCACCACCAACTTCCCCTCCTCCACTTTTGATACACTTTTTTGCTGCTGCTGTTTTCATTAGCTTTGCTGTTTCATTTGCTGCTCTTTTCCTTCATAACTCCTTCCCGAGAACCGCCCATTTATTCGAGAAGATTGGTGCGCTTTTTTCTGCATTTGGTGTGTGTTTCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTGGCATGTACCTTCTCCATCATTGTCTTTGCTTTATCATTTAAGTGACATTTTTTAGACATAAAATGGCCATTTCTTTACCCATCCATTAGGCATTTTGTTTGACCTTCTTCCATGGCTCCATCAAGAATAATGAGCTCTCTCTGTATGGATTTTTTTTCCCAGTTGAGATAATATTATTGAAGAAAAAGTTGTTCCCAC
Coding sequence (CDS)
ATGGCTTCAACTTCACACCAAACCTCTTTAGATATGAGTGCATTTTCTTCTTTTATCCGAACAATCAGCCAAAGAAACTATGGACTTGGCTGTTGCTGCACACCATCAAACTGCTTACCAGTTTTCATTAGAATGCAACAAAGCCCTCAAGCAACAGCCGATAGCTCTCAAAAACTTGGCAAGATAATTCTTAGCCTTAGTTTTCAAGCAGTTTTAGCCTTGTTCATTAGCTCACCACCAACTTCCCCTCCTCCACTTTTGATACACTTTTTTGCTGCTGCTGTTTTCATTAGCTTTGCTGTTTCATTTGCTGCTCTTTTCCTTCATAACTCCTTCCCGAGAACCGCCCATTTATTCGAGAAGATTGGTGCGCTTTTTTCTGCATTTGGTGTGTGTTTCATAGCAAGCTTTCTTCTAGTTCATCAGAACTTTGCTTGGATTTGTTGGGTGGCATGTACCTTCTCCATCATTGTCTTTGCTTTATCATTTAAGTGA
Protein sequence
MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK*
Homology
BLAST of CSPI05G02640 vs. ExPASy TrEMBL
Match:
A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)
HSP 1 Score: 319.3 bits (817), Expect = 9.3e-84
Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 0
Query: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG 60
MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG
Sbjct: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG 60
Query: 61 KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE 120
KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE
Sbjct: 61 KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE 120
Query: 121 KIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 165
K+GALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
Sbjct: 121 KVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164
BLAST of CSPI05G02640 vs. ExPASy TrEMBL
Match:
A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 2.2e-32
Identity = 88/154 (57.14%), Postives = 108/154 (70.13%), Query Frame = 0
Query: 12 MSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQ-SPQATADSSQKLGKIILSLSFQA 71
M+ SFI I++RN + N LP+ I MQ+ SP ++ + +GK IL L+FQA
Sbjct: 1 MNELYSFITAINERNPEI-------NSLPICITMQRPSPANSSKTENNVGKTILGLTFQA 60
Query: 72 VLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFEKIGALFSAFG 131
VLALFI+S P S PPLL H FAAAV ISFAVSFA +FL N FPR A LFEKIGAL +A G
Sbjct: 61 VLALFITS-PNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIG 120
Query: 132 VCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 165
VC +AS LL+HQNFAWI W+A FS++ F LSF+
Sbjct: 121 VCIVAS-LLIHQNFAWISWLASGFSLMAFVLSFR 145
BLAST of CSPI05G02640 vs. ExPASy TrEMBL
Match:
A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 4.9e-32
Identity = 90/165 (54.55%), Postives = 113/165 (68.48%), Query Frame = 0
Query: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQ-QSPQATADSSQKL 60
M S+S Q S+DM+ S I +I++RN + N LP+ I MQ SP ++ + +
Sbjct: 1 MESSSQQISIDMNHLYSLITSINERNPEI-------NGLPICIIMQTASPANSSKTENNV 60
Query: 61 GKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLF 120
G IL L+FQAVLALFI+S TS PPLL H F AAV ISFAVSF +FL + FPR A LF
Sbjct: 61 GTTILGLTFQAVLALFITS-STSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLF 120
Query: 121 EKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 165
EKIGAL +A GVC +AS LL+HQNFAWI W+AC FS++ F LSF+
Sbjct: 121 EKIGALIAAIGVCILAS-LLIHQNFAWISWLACGFSLMAFLLSFR 156
BLAST of CSPI05G02640 vs. ExPASy TrEMBL
Match:
A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1)
HSP 1 Score: 122.9 bits (307), Expect = 1.3e-24
Identity = 77/127 (60.63%), Postives = 89/127 (70.08%), Query Frame = 0
Query: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGL------GCCCTPSNCLPVFIRMQQSPQATAD 60
MAST QTS+DM+A SSFI I++RN G+ G TPS+CLP+ IRMQ+ P A
Sbjct: 1 MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPP--PAK 60
Query: 61 SSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPR 120
SSQ LGK IL L+FQAVLALFIS P+SPP L F AAV ISFAVSFA LFL ++PR
Sbjct: 61 SSQSLGKTILGLTFQAVLALFISL-PSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPR 120
Query: 121 TAHLFEK 122
A LFEK
Sbjct: 121 MALLFEK 124
BLAST of CSPI05G02640 vs. ExPASy TrEMBL
Match:
A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1)
HSP 1 Score: 118.2 bits (295), Expect = 3.2e-23
Identity = 70/168 (41.67%), Postives = 99/168 (58.93%), Query Frame = 0
Query: 1 MAST-SHQTSLDMSAFSSFIRTISQRNYGLGCCC---TPSNCLPVFIRMQQSPQATADSS 60
MA T H+ SLDM+ +S I ++ RN G+ C S+CLP++I+MQ+ +S
Sbjct: 1 MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPV---NS 60
Query: 61 QKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTA 120
+ G LSL+FQA++ LF+S P+S PL FAA + SF S+ + L FP+TA
Sbjct: 61 PQFGNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTA 120
Query: 121 HLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 165
L + GALF+A G C I S LL++ NF WICW+A + F +SFK
Sbjct: 121 QLLQTFGALFAAIGTCIIGS-LLLYPNFTWICWLAAGLILPAFIISFK 164
BLAST of CSPI05G02640 vs. NCBI nr
Match:
KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus])
HSP 1 Score: 319.3 bits (817), Expect = 1.9e-83
Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 0
Query: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG 60
MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG
Sbjct: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG 60
Query: 61 KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE 120
KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE
Sbjct: 61 KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE 120
Query: 121 KIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 165
K+GALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK
Sbjct: 121 KVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164
BLAST of CSPI05G02640 vs. NCBI nr
Match:
KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])
HSP 1 Score: 148.7 bits (374), Expect = 4.5e-32
Identity = 88/154 (57.14%), Postives = 108/154 (70.13%), Query Frame = 0
Query: 12 MSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQ-SPQATADSSQKLGKIILSLSFQA 71
M+ SFI I++RN + N LP+ I MQ+ SP ++ + +GK IL L+FQA
Sbjct: 1 MNELYSFITAINERNPEI-------NSLPICITMQRPSPANSSKTENNVGKTILGLTFQA 60
Query: 72 VLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFEKIGALFSAFG 131
VLALFI+S P S PPLL H FAAAV ISFAVSFA +FL N FPR A LFEKIGAL +A G
Sbjct: 61 VLALFITS-PNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIG 120
Query: 132 VCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 165
VC +AS LL+HQNFAWI W+A FS++ F LSF+
Sbjct: 121 VCIVAS-LLIHQNFAWISWLASGFSLMAFVLSFR 145
BLAST of CSPI05G02640 vs. NCBI nr
Match:
KGN49803.1 (hypothetical protein Csa_004681 [Cucumis sativus])
HSP 1 Score: 147.5 bits (371), Expect = 1.0e-31
Identity = 90/165 (54.55%), Postives = 113/165 (68.48%), Query Frame = 0
Query: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQ-QSPQATADSSQKL 60
M S+S Q S+DM+ S I +I++RN + N LP+ I MQ SP ++ + +
Sbjct: 1 MESSSQQISIDMNHLYSLITSINERNPEI-------NGLPICIIMQTASPANSSKTENNV 60
Query: 61 GKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLF 120
G IL L+FQAVLALFI+S TS PPLL H F AAV ISFAVSF +FL + FPR A LF
Sbjct: 61 GTTILGLTFQAVLALFITS-STSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLF 120
Query: 121 EKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 165
EKIGAL +A GVC +AS LL+HQNFAWI W+AC FS++ F LSF+
Sbjct: 121 EKIGALIAAIGVCILAS-LLIHQNFAWISWLACGFSLMAFLLSFR 156
BLAST of CSPI05G02640 vs. NCBI nr
Match:
KAG6579132.1 (hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 129.0 bits (323), Expect = 3.7e-26
Identity = 71/130 (54.62%), Postives = 95/130 (73.08%), Query Frame = 0
Query: 34 TPSNCLPVFIRMQQSPQATADSSQKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAA 93
TP +CLP++ +Q + S +GK I+ L+ QA+LA+FISS P+S PPLL F A
Sbjct: 5 TPRDCLPIWRAREQRLEPDKGHS-NVGKAIIGLTSQALLAMFISS-PSSSPPLLRVLFGA 64
Query: 94 AVFISFAVSFAALFLHNSFPRTAHLFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACT 153
+FISF +SFA +FL N+FP+ A LFEK+GALF+A GV IASFLL+H+N+AWI +AC
Sbjct: 65 TMFISFLLSFAGIFLRNAFPKAARLFEKLGALFAAIGVSIIASFLLMHENYAWISGLACV 124
Query: 154 FSIIVFALSF 164
FS+IVF LS+
Sbjct: 125 FSLIVFGLSY 132
BLAST of CSPI05G02640 vs. NCBI nr
Match:
KAG6579137.1 (hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 125.9 bits (315), Expect = 3.1e-25
Identity = 84/167 (50.30%), Postives = 103/167 (61.68%), Query Frame = 0
Query: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQ--- 60
M ST S+DM+ F I + GL P+ +P P DSSQ
Sbjct: 1 MGSTPQHVSIDMNQFC----PIQGASDGL----PPTTAMP-------RPPPPPDSSQTRN 60
Query: 61 KLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAH 120
LGKI+ L+FQAVLALFI SPPTS PPLL+H FAAA+ ISFA+S AALFL ++PR A
Sbjct: 61 NLGKIVFGLTFQAVLALFI-SPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYPRIAL 120
Query: 121 LFEKIGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 165
KIGAL +A G C I S LL HQ+F+WI W+AC F+++ F LSFK
Sbjct: 121 SSGKIGALLAAIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK 151
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KJP2 | 9.3e-84 | 99.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1 | [more] |
A0A5A7U7U1 | 2.2e-32 | 57.14 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A0A0KJN8 | 4.9e-32 | 54.55 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1 | [more] |
A0A6J1CY58 | 1.3e-24 | 60.63 | uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
A0A0A0KQ03 | 3.2e-23 | 41.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN49808.1 | 1.9e-83 | 99.39 | hypothetical protein Csa_004650 [Cucumis sativus] | [more] |
KAA0050246.1 | 4.5e-32 | 57.14 | putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... | [more] |
KGN49803.1 | 1.0e-31 | 54.55 | hypothetical protein Csa_004681 [Cucumis sativus] | [more] |
KAG6579132.1 | 3.7e-26 | 54.62 | hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6579137.1 | 3.1e-25 | 50.30 | hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |