CSPI05G01760 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAAACAAACTGACACCATATTTGAGTTTAGGCAGCTATTCGAAACCTACTCAGCGTCGTTACCGAAGTTGGCTGAAAATGTCCACCAGAATACGTTTATGATTGGGCTTCAACAAAATATTAAGGCTAAGATTATCACCAATGAACCGATTGGGCTGGAAAGTATCATGCAACAAGCCCAAATTATTGAAGACCATCATTTAGCCCTCAAATTGGCTTCAGAGGTCATATCCTTTTCAAAAAAAGAAAAAAGAAAAATTGGCTTCAGAGGCATTGGGTACCGAGCCCCAAAAACAATGCATGGAATCTGCCCAATATCTTAG ATGGTGAAACAAACTGACACCATATTTGAGTTTAGGCAGCTATTCGAAACCTACTCAGCGTCGTTACCGAAGTTGGCTGAAAATGTCCACCAGAATACGTTTATGATTGGGCTTCAACAAAATATTAAGGCTAAGATTATCACCAATGAACCGATTGGGCTGGAAAGTATCATGCAACAAGCCCAAATTATTGAAGACCATCATTTAGCCCTCAAATTGGCTTCAGAGGTCATATCCTTTTCAAAAAAAGAAAAAAGAAAAATTGGCTTCAGAGGCATTGGGTACCGAGCCCCAAAAACAATGCATGGAATCTGCCCAATATCTTAG ATGGTGAAACAAACTGACACCATATTTGAGTTTAGGCAGCTATTCGAAACCTACTCAGCGTCGTTACCGAAGTTGGCTGAAAATGTCCACCAGAATACGTTTATGATTGGGCTTCAACAAAATATTAAGGCTAAGATTATCACCAATGAACCGATTGGGCTGGAAAGTATCATGCAACAAGCCCAAATTATTGAAGACCATCATTTAGCCCTCAAATTGGCTTCAGAGGTCATATCCTTTTCAAAAAAAGAAAAAAGAAAAATTGGCTTCAGAGGCATTGGGTACCGAGCCCCAAAAACAATGCATGGAATCTGCCCAATATCTTAG MVKQTDTIFEFRQLFETYSASLPKLAENVHQNTFMIGLQQNIKAKIITNEPIGLESIMQQAQIIEDHHLALKLASEVISFSKKEKRKIGFRGIGYRAPKTMHGICPIS* Homology
BLAST of CSPI05G01760 vs. ExPASy TrEMBL
Match: A0A5D3DFL3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00520 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.7e-07 Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of CSPI05G01760 vs. ExPASy TrEMBL
Match: A0A6J1D5H9 (uncharacterized protein LOC111017476 OS=Momordica charantia OX=3673 GN=LOC111017476 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.7e-07 Identity = 30/75 (40.00%), Postives = 51/75 (68.00%), Query Frame = 0
BLAST of CSPI05G01760 vs. ExPASy TrEMBL
Match: A0A5A7V689 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00280 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.0e-06 Identity = 30/73 (41.10%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of CSPI05G01760 vs. ExPASy TrEMBL
Match: A0A5D3DTH7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G001150 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.0e-06 Identity = 29/73 (39.73%), Postives = 50/73 (68.49%), Query Frame = 0
BLAST of CSPI05G01760 vs. ExPASy TrEMBL
Match: A0A5A7T8C0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00570 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 4.0e-06 Identity = 29/73 (39.73%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of CSPI05G01760 vs. NCBI nr
Match: XP_031745472.1 (uncharacterized protein K02A2.6-like [Cucumis sativus]) HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07 Identity = 34/93 (36.56%), Postives = 59/93 (63.44%), Query Frame = 0
BLAST of CSPI05G01760 vs. NCBI nr
Match: XP_031745726.1 (uncharacterized protein K02A2.6-like [Cucumis sativus]) HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07 Identity = 34/93 (36.56%), Postives = 59/93 (63.44%), Query Frame = 0
BLAST of CSPI05G01760 vs. NCBI nr
Match: KAA0060319.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22069.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 64.7 bits (156), Expect = 5.7e-07 Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of CSPI05G01760 vs. NCBI nr
Match: XP_031745419.1 (uncharacterized protein LOC116405630 [Cucumis sativus]) HSP 1 Score: 64.3 bits (155), Expect = 7.4e-07 Identity = 34/93 (36.56%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of CSPI05G01760 vs. NCBI nr
Match: XP_031742100.1 (uncharacterized protein LOC116404055 [Cucumis sativus]) HSP 1 Score: 64.3 bits (155), Expect = 7.4e-07 Identity = 34/93 (36.56%), Postives = 58/93 (62.37%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|