CSPI05G01670 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G01670
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNa/K-ATPase alpha 2 subunit
LocationChr5: 2308720 .. 2309118 (+)
RNA-Seq ExpressionCSPI05G01670
SyntenyCSPI05G01670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCATCAGATGCTAACATTGAAGGAGACAAGAAGGAAACATAAATGGAGAAAAGTTCCGTTCAAGCTGGAGAAGATGATACATTTATCAACAAGTCCATGGAGGAGTTCCCTGAGAATGTTTCTGATGATTCGGTTGATGTCAAGATCCAATGGAAAATGGAAGAAGAAATTCTTCCTAAAGACAACTGTCGAAGCTATCGACTCACAACCAGAAATCCCAAATGCCATTGTTCAATGTGAGGAAGCTTTGGTGGAAATCACTACCACATCCTCCAACAACAATGCAGTTCAATCATTGGCAATTCAATTCCCTATGCCAACAATAGAAGCCAAATCTCCCGTTAAAGAACAAATCATTAGTTTGCTAATGGACAACCCAGATGCTGAGGAATAA

mRNA sequence

ATGAAGCATCAGATGCTAACATTGAAGGAGACAAGAAGGAAACATAAATGGAGAAAAGTTCCGTTCAAGCTGGAGAAGATGATACATTTATCAACAAGTCCATGGAGGAGTTCCCTGAGAATGTTTCTGATGATTCGGTTGATGTCAAGATCCAATGGAAAATGGAAGAAGAAATTCTTCCTAAAGACAACTGTCGAAGCTATCGACTCACAACCAGAAATCCCAAATGCCATTGTTCAATGTGAGGAAGCTTTGGTGGAAATCACTACCACATCCTCCAACAACAATGCAGTTCAATCATTGGCAATTCAATTCCCTATGCCAACAATAGAAGCCAAATCTCCCGTTAAAGAACAAATCATTAGTTTGCTAATGGACAACCCAGATGCTGAGGAATAA

Coding sequence (CDS)

ATGAAGCATCAGATGCTAACATTGAAGGAGACAAGAAGGAAACATAAATGGAGAAAAGTTCCGTTCAAGCTGGAGAAGATGATACATTTATCAACAAGTCCATGGAGGAGTTCCCTGAGAATGTTTCTGATGATTCGGTTGATGTCAAGATCCAATGGAAAATGGAAGAAGAAATTCTTCCTAAAGACAACTGTCGAAGCTATCGACTCACAACCAGAAATCCCAAATGCCATTGTTCAATGTGAGGAAGCTTTGGTGGAAATCACTACCACATCCTCCAACAACAATGCAGTTCAATCATTGGCAATTCAATTCCCTATGCCAACAATAGAAGCCAAATCTCCCGTTAAAGAACAAATCATTAGTTTGCTAATGGACAACCCAGATGCTGAGGAATAA

Protein sequence

MKHQMLTLKETRRKHKWRKVPFKLEKMIHLSTSPWRSSLRMFLMIRLMSRSNGKWKKKFFLKTTVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPVKEQIISLLMDNPDAEE*
Homology
[Close]
BLAST of CSPI05G01670 vs. ExPASy TrEMBL
Match: A0A0A0KIZ6 (Na/K-ATPase alpha 2 subunit OS=Cucumis sativus OX=3659 GN=Csa_5G077240 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 63  TTVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPVKEQIIS 122
           T VEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPV+EQ IS
Sbjct: 31  TIVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPVEEQTIS 90

Query: 123 LLMDNPDAEE 133
           LLMDNPDAEE
Sbjct: 91  LLMDNPDAEE 100

[Close]
BLAST of CSPI05G01670 vs. ExPASy TrEMBL
Match: A0A1S3CT90 (probable beta-tubulin polyglutamylase OS=Cucumis melo OX=3656 GN=LOC103504683 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.4e-24
Identity = 65/69 (94.20%), Postives = 66/69 (95.65%), Query Frame = 0 

Query: 64  TVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPVKEQIISL 123
           TVEAIDSQP+IPNAIVQCEEALVEITTTSSNNNAVQSLA QFP PTIEAKSPVKEQIISL
Sbjct: 512 TVEAIDSQPKIPNAIVQCEEALVEITTTSSNNNAVQSLANQFPRPTIEAKSPVKEQIISL 571

Query: 124 LMDNPDAEE 133
           LMDN DAEE
Sbjct: 572 LMDNLDAEE 580

[Close]
BLAST of CSPI05G01670 vs. ExPASy TrEMBL
Match: A0A5A7UN97 (Putative beta-tubulin polyglutamylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00410 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 6.7e-24
Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 0 

Query: 64  TVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPVKEQIISL 123
           TVEAIDSQP+IPNAIVQCEEALVEITTTSSNNNAVQSLA QFP PTIEAKSPVKEQI SL
Sbjct: 512 TVEAIDSQPKIPNAIVQCEEALVEITTTSSNNNAVQSLANQFPRPTIEAKSPVKEQISSL 571

Query: 124 LMDNPDAEE 133
           LMDN DAEE
Sbjct: 572 LMDNLDAEE 580

[Close]
BLAST of CSPI05G01670 vs. ExPASy TrEMBL
Match: A0A0A0KL59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168990 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 6.7e-24
Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 65  VEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPVKEQIISLL 124
           VEAIDSQPEIPNAIVQCEEALVEIT TSSNNNAVQSLA QFP PTIEAKSPV+EQ ISLL
Sbjct: 50  VEAIDSQPEIPNAIVQCEEALVEITITSSNNNAVQSLANQFPRPTIEAKSPVEEQTISLL 109

Query: 125 MDNPDAEE 133
           MDNPDAEE
Sbjct: 110 MDNPDAEE 117

[Close]
BLAST of CSPI05G01670 vs. ExPASy TrEMBL
Match: A0A6J1I214 (uncharacterized protein LOC111469129 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469129 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10
Identity = 45/81 (55.56%), Postives = 54/81 (66.67%), Query Frame = 0 

Query: 63  TTVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQS----------LAIQFPMPT-IE 122
           T V+ IDS P+IPN I+QCEEAL+E+ + SSNNN +QS          LA QFP P+ +E
Sbjct: 428 TNVDTIDSHPDIPNDILQCEEALIEV-SVSSNNNGIQSLPSLAAAQLALANQFPRPSVVE 487

Query: 123 AKSPVKEQIISLLMDNPDAEE 133
            KS  KEQ   LLMDN DAEE
Sbjct: 488 TKSSHKEQATRLLMDNSDAEE 507

[Close]
BLAST of CSPI05G01670 vs. NCBI nr
Match: XP_031742149.1 (probable serine/threonine-protein kinase kinX isoform X1 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 4.3e-25
Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 0 

Query: 64  TVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPVKEQIISL 123
           TVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLA QFP PTIEAKSPVKEQ ISL
Sbjct: 516 TVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLATQFPRPTIEAKSPVKEQTISL 575

Query: 124 LMDNPDAEE 133
           LMDNPD EE
Sbjct: 576 LMDNPDVEE 584

[Close]
BLAST of CSPI05G01670 vs. NCBI nr
Match: XP_011654865.2 (probable serine/threonine-protein kinase kinX isoform X2 [Cucumis sativus] >KAE8647937.1 hypothetical protein Csa_000497 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 4.3e-25
Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 0 

Query: 64  TVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPVKEQIISL 123
           TVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLA QFP PTIEAKSPVKEQ ISL
Sbjct: 512 TVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLATQFPRPTIEAKSPVKEQTISL 571

Query: 124 LMDNPDAEE 133
           LMDNPD EE
Sbjct: 572 LMDNPDVEE 580

[Close]
BLAST of CSPI05G01670 vs. NCBI nr
Match: XP_008467303.1 (PREDICTED: probable beta-tubulin polyglutamylase [Cucumis melo])

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-24
Identity = 65/69 (94.20%), Postives = 66/69 (95.65%), Query Frame = 0 

Query: 64  TVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPVKEQIISL 123
           TVEAIDSQP+IPNAIVQCEEALVEITTTSSNNNAVQSLA QFP PTIEAKSPVKEQIISL
Sbjct: 512 TVEAIDSQPKIPNAIVQCEEALVEITTTSSNNNAVQSLANQFPRPTIEAKSPVKEQIISL 571

Query: 124 LMDNPDAEE 133
           LMDN DAEE
Sbjct: 572 LMDNLDAEE 580

[Close]
BLAST of CSPI05G01670 vs. NCBI nr
Match: KAA0055115.1 (putative beta-tubulin polyglutamylase [Cucumis melo var. makuwa])

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-23
Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 0 

Query: 64  TVEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPVKEQIISL 123
           TVEAIDSQP+IPNAIVQCEEALVEITTTSSNNNAVQSLA QFP PTIEAKSPVKEQI SL
Sbjct: 512 TVEAIDSQPKIPNAIVQCEEALVEITTTSSNNNAVQSLANQFPRPTIEAKSPVKEQISSL 571

Query: 124 LMDNPDAEE 133
           LMDN DAEE
Sbjct: 572 LMDNLDAEE 580

[Close]
BLAST of CSPI05G01670 vs. NCBI nr
Match: MBC9849949.1 (hypothetical protein [Adiantum capillus-veneris])

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-23
Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 65  VEAIDSQPEIPNAIVQCEEALVEITTTSSNNNAVQSLAIQFPMPTIEAKSPVKEQIISLL 124
           VEAIDSQPEIPNAIVQCEEALVEIT TSSNNNAVQSLA QFP PTIEAKSPV+EQ ISLL
Sbjct: 50  VEAIDSQPEIPNAIVQCEEALVEITITSSNNNAVQSLANQFPRPTIEAKSPVEEQTISLL 109

Query: 125 MDNPDAEE 133
           MDNPDAEE
Sbjct: 110 MDNPDAEE 117

The following BLAST results are available for this feature:
BLAST of CSPI05G01670 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G01670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIZ61.4e-2695.71Na/K-ATPase alpha 2 subunit OS=Cucumis sativus OX=3659 GN=Csa_5G077240 PE=4 SV=1[more]
A0A1S3CT901.4e-2494.20probable beta-tubulin polyglutamylase OS=Cucumis melo OX=3656 GN=LOC103504683 PE... [more]
A0A5A7UN976.7e-2492.75Putative beta-tubulin polyglutamylase OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A0A0KL596.7e-2492.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168990 PE=4 SV=1[more]
A0A6J1I2141.9e-1055.56uncharacterized protein LOC111469129 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of CSPI05G01670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031742149.14.3e-2594.20probable serine/threonine-protein kinase kinX isoform X1 [Cucumis sativus][more]
XP_011654865.24.3e-2594.20probable serine/threonine-protein kinase kinX isoform X2 [Cucumis sativus] >KAE8... [more]
XP_008467303.12.8e-2494.20PREDICTED: probable beta-tubulin polyglutamylase [Cucumis melo][more]
KAA0055115.11.4e-2392.75putative beta-tubulin polyglutamylase [Cucumis melo var. makuwa][more]
MBC9849949.11.4e-2392.65hypothetical protein [Adiantum capillus-veneris][more]
BLAST of CSPI05G01670 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G01670.1CSPI05G01670.1mRNA