CSPI05G01450 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G01450
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Transposase
Location	Chr5: 2028333 .. 2028741 (+)
RNA-Seq Expression	CSPI05G01450
Synteny	CSPI05G01450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAATGATCGAGATATGAGCATAATTGATCATTCTCAAGCTGGATACGAGATCAGGTATGTTATATGGATGTACTTTCATGTTATTGACATAAAGTATAAACAACCGTGTCTGACTATGGTTACCATAATAGGTAATACTTGAGATTCATAAAGGTAAAGTCATGAGCACAACTATAAGATGGATTGCATATGGCCCACTTCCTGTTGTGATGACATATGAGGGATATAAAGTCAACGTAGTTTGCTACAACACAAAGTCCCGTGATGGCACCAGAACGATTCAAAACAGTGGGGTTATGTTCGTTGCATCAACAATGCAGGTGGCTAGTGACAAAGATAAAAACCCAATAATTGCTAACTTGTCATTCTATGGTATGATTCAAGAAATCTGGGAAGTCAGTTAG

mRNA sequence

ATGAGAAATGATCGAGATATGAGCATAATTGATCATTCTCAAGCTGGATACGAGATCAGATGGATTGCATATGGCCCACTTCCTGTTGTGATGACATATGAGGGATATAAAGTCAACGTAGTTTGCTACAACACAAAGTCCCGTGATGGCACCAGAACGATTCAAAACAGTGGGGTTATGTTCGTTGCATCAACAATGCAGGTGGCTAGTGACAAAGATAAAAACCCAATAATTGCTAACTTGTCATTCTATGGTATGATTCAAGAAATCTGGGAAGTCAGTTAG

Coding sequence (CDS)

ATGAGAAATGATCGAGATATGAGCATAATTGATCATTCTCAAGCTGGATACGAGATCAGATGGATTGCATATGGCCCACTTCCTGTTGTGATGACATATGAGGGATATAAAGTCAACGTAGTTTGCTACAACACAAAGTCCCGTGATGGCACCAGAACGATTCAAAACAGTGGGGTTATGTTCGTTGCATCAACAATGCAGGTGGCTAGTGACAAAGATAAAAACCCAATAATTGCTAACTTGTCATTCTATGGTATGATTCAAGAAATCTGGGAAGTCAGTTAG

Protein sequence

MRNDRDMSIIDHSQAGYEIRWIAYGPLPVVMTYEGYKVNVVCYNTKSRDGTRTIQNSGVMFVASTMQVASDKDKNPIIANLSFYGMIQEIWEVS*

Homology

[Close]

BLAST of CSPI05G01450 vs. ExPASy TrEMBL
Match: A0A5D3BM89 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001020 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.8e-30
Identity = 70/102 (68.63%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 1   MRNDRDMSIIDHSQAGYE--------IRWIAYGPLPVVMTYEGYKVNVVCYNTKSRDGTR 60
           MRN  +MS IDH   GYE        IRWIA+GP PVVM YEGYKVN +CYNTK  D TR
Sbjct: 1   MRNGCEMSTIDHFLTGYETRSSLSMTIRWIAHGPHPVVMIYEGYKVNGICYNTKPCDDTR 60

Query: 61  TIQNSGVMFVASTMQVASDKDKNPIIANLSFYGMIQEIWEVS 95
           T+QNSGVMFVASTM VAS KDKN IIA++SFYG+IQ IWEV+
Sbjct: 61  TVQNSGVMFVASTMHVASAKDKNLIIADMSFYGVIQGIWEVN 102

[Close]

BLAST of CSPI05G01450 vs. ExPASy TrEMBL
Match: A0A5A7V9J9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00300 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.2e-28
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 19  IRWIAYGPLPVVMTYEGYKVNVVCYNTKSRDGTRTIQNSGVMFVASTMQVASDKDKNPII 78
           IRWIA+GP PVVM YEGYKVN +CYNTK RD TRT+QNSGVMFVASTM VAS KDKNPII
Sbjct: 369 IRWIAHGPHPVVMIYEGYKVNEICYNTKRRDDTRTVQNSGVMFVASTMHVASAKDKNPII 428

Query: 79  ANLSFYGMIQEIWEVS 95
           A++SFYG+IQ IWEVS
Sbjct: 429 ADMSFYGVIQGIWEVS 444

[Close]

BLAST of CSPI05G01450 vs. ExPASy TrEMBL
Match: A0A5D3DLJ9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001780 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.2e-28
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 19  IRWIAYGPLPVVMTYEGYKVNVVCYNTKSRDGTRTIQNSGVMFVASTMQVASDKDKNPII 78
           IRWIA+GP PVVM YEGYKVN +CYNTK RD TRT+QNSGVMFVASTM VAS KDKNPII
Sbjct: 878 IRWIAHGPHPVVMIYEGYKVNGICYNTKRRDDTRTVQNSGVMFVASTMHVASAKDKNPII 937

Query: 79  ANLSFYGMIQEIWEVS 95
           A++SFYG+IQ IWEVS
Sbjct: 938 ADMSFYGVIQGIWEVS 953

[Close]

BLAST of CSPI05G01450 vs. ExPASy TrEMBL
Match: A0A5A7UXS1 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3037G00020 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.2e-28
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 19  IRWIAYGPLPVVMTYEGYKVNVVCYNTKSRDGTRTIQNSGVMFVASTMQVASDKDKNPII 78
           IRWIA+GP PVVM YEGYKVN +CYNTK RD TRT+QNSGVMFVASTM VAS KDKNPII
Sbjct: 46  IRWIAHGPHPVVMIYEGYKVNGICYNTKRRDDTRTVQNSGVMFVASTMHVASAKDKNPII 105

Query: 79  ANLSFYGMIQEIWEVS 95
           A++SFYG+IQ IWEVS
Sbjct: 106 ADMSFYGVIQGIWEVS 121

[Close]

BLAST of CSPI05G01450 vs. ExPASy TrEMBL
Match: A0A5A7TEQ8 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10858G00010 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.2e-28
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 19 IRWIAYGPLPVVMTYEGYKVNVVCYNTKSRDGTRTIQNSGVMFVASTMQVASDKDKNPII 78
          IRWIA+GP PVVM YEGYKVN +CYNTK RD TRT+QNSGVMFVASTM VAS KDKNPII
Sbjct: 14 IRWIAHGPHPVVMIYEGYKVNGICYNTKRRDDTRTVQNSGVMFVASTMHVASAKDKNPII 73

Query: 79 ANLSFYGMIQEIWEVS 95
          A++SFYG+IQ IWEVS
Sbjct: 74 ADMSFYGVIQGIWEVS 89

[Close]

BLAST of CSPI05G01450 vs. NCBI nr
Match: KAA0066348.1 (transposase [Cucumis melo var. makuwa] >TYK00931.1 transposase [Cucumis melo var. makuwa])

HSP 1 Score: 139.8 bits (351), Expect = 1.2e-29
Identity = 70/102 (68.63%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 1   MRNDRDMSIIDHSQAGYE--------IRWIAYGPLPVVMTYEGYKVNVVCYNTKSRDGTR 60
           MRN  +MS IDH   GYE        IRWIA+GP PVVM YEGYKVN +CYNTK  D TR
Sbjct: 1   MRNGCEMSTIDHFLTGYETRSSLSMTIRWIAHGPHPVVMIYEGYKVNGICYNTKPCDDTR 60

Query: 61  TIQNSGVMFVASTMQVASDKDKNPIIANLSFYGMIQEIWEVS 95
           T+QNSGVMFVASTM VAS KDKN IIA++SFYG+IQ IWEV+
Sbjct: 61  TVQNSGVMFVASTMHVASAKDKNLIIADMSFYGVIQGIWEVN 102

[Close]

BLAST of CSPI05G01450 vs. NCBI nr
Match: KAA0063904.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 6.6e-28
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 19  IRWIAYGPLPVVMTYEGYKVNVVCYNTKSRDGTRTIQNSGVMFVASTMQVASDKDKNPII 78
           IRWIA+GP PVVM YEGYKVN +CYNTK RD TRT+QNSGVMFVASTM VAS KDKNPII
Sbjct: 369 IRWIAHGPHPVVMIYEGYKVNEICYNTKRRDDTRTVQNSGVMFVASTMHVASAKDKNPII 428

Query: 79  ANLSFYGMIQEIWEVS 95
           A++SFYG+IQ IWEVS
Sbjct: 429 ADMSFYGVIQGIWEVS 444

[Close]

BLAST of CSPI05G01450 vs. NCBI nr
Match: KAA0040935.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 133.7 bits (335), Expect = 8.6e-28
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 19  IRWIAYGPLPVVMTYEGYKVNVVCYNTKSRDGTRTIQNSGVMFVASTMQVASDKDKNPII 78
           IRWIA+GP PVVM YEGYKVN +CYNTK RD TRT+QNSGVMFVASTM VAS KDKNPII
Sbjct: 861 IRWIAHGPHPVVMIYEGYKVNGICYNTKPRDDTRTVQNSGVMFVASTMHVASAKDKNPII 920

Query: 79  ANLSFYGMIQEIWEVS 95
           A++SFYG+IQ IWEVS
Sbjct: 921 ADMSFYGVIQGIWEVS 936

[Close]

BLAST of CSPI05G01450 vs. NCBI nr
Match: TYK24392.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 133.7 bits (335), Expect = 8.6e-28
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 19  IRWIAYGPLPVVMTYEGYKVNVVCYNTKSRDGTRTIQNSGVMFVASTMQVASDKDKNPII 78
           IRWIA+GP PVVM YEGYKVN +CYNTK RD TRT+QNSGVMFVASTM VAS KDKNPII
Sbjct: 878 IRWIAHGPHPVVMIYEGYKVNGICYNTKRRDDTRTVQNSGVMFVASTMHVASAKDKNPII 937

Query: 79  ANLSFYGMIQEIWEVS 95
           A++SFYG+IQ IWEVS
Sbjct: 938 ADMSFYGVIQGIWEVS 953

[Close]

BLAST of CSPI05G01450 vs. NCBI nr
Match: KAA0038004.1 (transposase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 133.7 bits (335), Expect = 8.6e-28
Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 19  IRWIAYGPLPVVMTYEGYKVNVVCYNTKSRDGTRTIQNSGVMFVASTMQVASDKDKNPII 78
           IRWIA+GP PVVM YEGYKVN +CYNTK RD TRT+QNSGVMFVASTM VAS KDKNPII
Sbjct: 779 IRWIAHGPHPVVMIYEGYKVNGICYNTKHRDDTRTVQNSGVMFVASTMHVASAKDKNPII 838

Query: 79  ANLSFYGMIQEIWEVS 95
           A++SFYG+IQ IWEVS
Sbjct: 839 ADMSFYGVIQGIWEVS 854

The following BLAST results are available for this feature:

BLAST of CSPI05G01450 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI05G01450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BM89	5.8e-30	68.63	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001020 P...	[more]
A0A5A7V9J9	3.2e-28	81.58	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00300 PE...	[more]
A0A5D3DLJ9	4.2e-28	81.58	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001780 P...	[more]
A0A5A7UXS1	4.2e-28	81.58	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3037G00020 P...	[more]
A0A5A7TEQ8	4.2e-28	81.58	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10858G00010 ...	[more]

BLAST of CSPI05G01450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066348.1	1.2e-29	68.63	transposase [Cucumis melo var. makuwa] >TYK00931.1 transposase [Cucumis melo var...	[more]
KAA0063904.1	6.6e-28	81.58	transposase [Cucumis melo var. makuwa]	[more]
KAA0040935.1	8.6e-28	81.58	transposase [Cucumis melo var. makuwa]	[more]
TYK24392.1	8.6e-28	81.58	transposase [Cucumis melo var. makuwa]	[more]
KAA0038004.1	8.6e-28	81.58	transposase-like protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI05G01450 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G01450.1	CSPI05G01450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity