CSPI05G00530 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G00530
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr5: 738006 .. 740514 (+)
RNA-Seq Expression	CSPI05G00530
Synteny	CSPI05G00530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTAAGTATGTTTCTCCCCATCAAAATCCCTTCATTGGTTAAAGAACTTGTGAAGTGCGGGTAGGGTCTAAGGTCGAAACCAAAACCCCTTAAACCCTCGAGTGTCTTTCCTTTCTTCCAACAATCTCTACCACTCAAACTCATCTTCGAATGGTCAAAGAAGCCCTCCAATACTTGGCTCACCTCCGACGAACCTTCCGCTTTCCCACCCCTTTCACCTGCAACAAGCTTCTCCACTCTCTCATCAATTCCGGCTGCGGCCACCTCTCCGCCAAATTGCTTTTCCACTTTCTCTCCAAAGGGTACACTCCTCATCCATCTTCTTTCAATTCCATCATCTCCTTTTTCTGTAGATCAGGAAATGTGAAATTTGCCGAACATATTTTCATTTCTATGTCTAGGTTTGGGTGCTCGCCTGATATTGTGTCCTACAATTCTTTGTTAGATGGGTATTGTTCGAGTTATCAAATTCAGAAAGCCTGCTTTCTTGTGAATAGAGTTCGTGGGTGTGAGTTAAATAGGCCTGATTTGGTGATGTTTAATATACTGTTTAATGGGTTTGCTAAAGTTTATATGAAGAATGAGGCATTTATGTATTTCGGTTTGATGTGGAAATACTGTTTGCCTAGTATTGTTACTTACGGTACGTTTGTTGATATGTTCTGTAAGATGGGGGATATGAAGATGGGTAATAGAATGTTTTTGGATATGATGAAGGTTGGTATTGTGCCTAATTTGGTTGTTTTTAGCTCCTTGATTGATGGCTATTGCAAGGCTGGGAGTTTGGATGTTGCATTTGAATACTTTGAGAGAATGAAAGAATGTTCGGTTCGGCCGAATGAGTTTACATATTCCACGTTGATTGATGGTTGCTCCAAGCATGGGATGTTGGCAAGAGCCGACTCTTTGTTTGAAAAGATGTTGAGTGCTAGTATTCTGCCTAATTGTACGGTTTACACTTCAATAATAGATGGTCATTTTAAGAAGGGAAATGTAGATGATGCGATAAAGTATATTAATCAGATGTTTGATCGAGATATAAAACTAGATTTAACAGCATATACGGTAATTATCTCAGGCTTTCATAGAGTTGGTAGGTTTGATAAATCAATGGAAGCTGCAGAATATGTGGCGAAGAATGGATTACTTCCTGATAGGATAATATTGACAGCTATTATGGATGTCCATTTCAAGGCTGGAAACATAAAAGAAGCTTTGAATGCATACAAAATATTACTCGCAAAGGGTTTTGAGGCTGATGTTGTGACTCTTTCCGCCCTAATGGATGGCCTATCCAAGCATGGGTATTTGCAGGAGGCTAGACGGTATTTGGTCAAAGAAAATGCCAATGAAATTTTATATACAGTGTTTATAGATGCACTATGCAAGGAGGGTAATTTAGATGACGCTGAGAAAATGATTAAGGAGATGTCTGAGGCAGGGTTTGTTCCAGATAAATTTGTGTACACTTCGTGGATTGCTGAACTTTGCAAGCAAGGGAATTTGCTGAAAGCTTTCATGGTTAAGAAAAGGATGGTTCAAGAGCATGTGGAACCTGATTTATTAACTTATAGCTCCCTCATTGGTGGTTTGGCTGAGAAGGGACTAATGATAGAAGCCAAACAGGTTTTTGATGATATGTTAAATAAAGGAATCACTCCAGATTTTGTATCTTATGACATCCTTATTAGAGGATATCATAATCAGGGTAACGGAGCTGCAATTTCAGGTTTACATGACGAAATGAGAAAGAGAGGAATCATTGTTGAAGATTAGTTCACCAAATATTGAAGTTTGGTCTTGTTCTTCAATTTATACATCAGCCTTCCATACGGGAAACCGAGATGTATGCGATTGACATCTGCTGACTGGATCATGATTTTGTAGACTGTAAAGGGTATTTTAGACGGAAACAAAAATATATAGAGAGAGTAATTCAAACTCAAATTAATGTTCCTCCATATACTCCTTTGCTTATCACAAGTTATGAAATCTCCCAAATGGTTAAATTTTGCCGATCACCTTTGGGTTATTGACATAAGTCACAAGGTGCGATTTCTATATCAAATATTGATCGAACACTGCATTTTTTTCACAACCATTTTGCAATTTTATGACTTCATGCTCTCTGTTTGGCAGATTTTGTTCTCATTATACTGTCTAGTTGCAACATAAGATCAGCCAAGTGGATGGCATTGTTTGAGATTCCACCTGATGGATTGCTTAGCAATTTCAAGTCATTGGCTGAAAGGTATATATCAATTCTTGCAAGCTAGAGATTTTATACGACCAAAATAAACACACTTTGGTTTTGTTGCATATGAGGAAGTTCTCATCAGAAACAGAAATAAGCTATTGTATAATTTGTCACTTCCTGCACTTGATGAATATGATTTACTTTGAGCACTTGGATGATGTATTGTAAAACTTTCCAATGTGAATTAGGATTATTTGAATGGGTTTCATTGTGGTCTATATTTTGAGAATACACGTATCTAGTACCTAAAC

mRNA sequence

GTGTAAGTATGTTTCTCCCCATCAAAATCCCTTCATTGGTTAAAGAACTTGTGAAGTGCGGGTAGGGTCTAAGGTCGAAACCAAAACCCCTTAAACCCTCGAGTGTCTTTCCTTTCTTCCAACAATCTCTACCACTCAAACTCATCTTCGAATGGTCAAAGAAGCCCTCCAATACTTGGCTCACCTCCGACGAACCTTCCGCTTTCCCACCCCTTTCACCTGCAACAAGCTTCTCCACTCTCTCATCAATTCCGGCTGCGGCCACCTCTCCGCCAAATTGCTTTTCCACTTTCTCTCCAAAGGGTACACTCCTCATCCATCTTCTTTCAATTCCATCATCTCCTTTTTCTGTAGATCAGGAAATGTGAAATTTGCCGAACATATTTTCATTTCTATGTCTAGGTTTGGGTGCTCGCCTGATATTGTGTCCTACAATTCTTTGTTAGATGGGTATTGTTCGAGTTATCAAATTCAGAAAGCCTGCTTTCTTGTGAATAGAGTTCGTGGGTGTGAGTTAAATAGGCCTGATTTGGTGATGTTTAATATACTGTTTAATGGGTTTGCTAAAGTTTATATGAAGAATGAGGCATTTATGTATTTCGGTTTGATGTGGAAATACTGTTTGCCTAGTATTGTTACTTACGGTACGTTTGTTGATATGTTCTGTAAGATGGGGGATATGAAGATGGGTAATAGAATGTTTTTGGATATGATGAAGGTTGGTATTGTGCCTAATTTGGTTGTTTTTAGCTCCTTGATTGATGGCTATTGCAAGGCTGGGAGTTTGGATGTTGCATTTGAATACTTTGAGAGAATGAAAGAATGTTCGGTTCGGCCGAATGAGTTTACATATTCCACGTTGATTGATGGTTGCTCCAAGCATGGGATGTTGGCAAGAGCCGACTCTTTGTTTGAAAAGATGTTGAGTGCTAGTATTCTGCCTAATTGTACGGTTTACACTTCAATAATAGATGGTCATTTTAAGAAGGGAAATGTAGATGATGCGATAAAGTATATTAATCAGATGTTTGATCGAGATATAAAACTAGATTTAACAGCATATACGGTAATTATCTCAGGCTTTCATAGAGTTGGTAGGTTTGATAAATCAATGGAAGCTGCAGAATATGTGGCGAAGAATGGATTACTTCCTGATAGGATAATATTGACAGCTATTATGGATGTCCATTTCAAGGCTGGAAACATAAAAGAAGCTTTGAATGCATACAAAATATTACTCGCAAAGGGTTTTGAGGCTGATGTTGTGACTCTTTCCGCCCTAATGGATGGCCTATCCAAGCATGGGTATTTGCAGGAGGCTAGACGGTATTTGGTCAAAGAAAATGCCAATGAAATTTTATATACAGTGTTTATAGATGCACTATGCAAGGAGGGTAATTTAGATGACGCTGAGAAAATGATTAAGGAGATGTCTGAGGCAGGGTTTGTTCCAGATAAATTTGTGTACACTTCGTGGATTGCTGAACTTTGCAAGCAAGGGAATTTGCTGAAAGCTTTCATGGTTAAGAAAAGGATGGTTCAAGAGCATGTGGAACCTGATTTATTAACTTATAGCTCCCTCATTGGTGGTTTGGCTGAGAAGGGACTAATGATAGAAGCCAAACAGGTTTTTGATGATATGTTAAATAAAGGAATCACTCCAGATTTTGTATCTTATGACATCCTTATTAGAGGATATCATAATCAGGGTAACGGAGCTGCAATTTCAGGTTTACATGACGAAATGAGAAAGAGAGGAATCATTGTTGAAGATTAGTTCACCAAATATTGAAGTTTGGTCTTGTTCTTCAATTTATACATCAGCCTTCCATACGGGAAACCGAGATGTATGCGATTGACATCTGCTGACTGGATCATGATTTTGTAGACTGTAAAGGGTATTTTAGACGGAAACAAAAATATATAGAGAGAGTAATTCAAACTCAAATTAATGTTCCTCCATATACTCCTTTGCTTATCACAAGTTATGAAATCTCCCAAATGGTTAAATTTTGCCGATCACCTTTGGGTTATTGACATAAGTCACAAGATTTTGTTCTCATTATACTGTCTAGTTGCAACATAAGATCAGCCAAGTGGATGGCATTGTTTGAGATTCCACCTGATGGATTGCTTAGCAATTTCAAGTCATTGGCTGAAAGGTATATATCAATTCTTGCAAGCTAGAGATTTTATACGACCAAAATAAACACACTTTGGTTTTGTTGCATATGAGGAAGTTCTCATCAGAAACAGAAATAAGCTATTGTATAATTTGTCACTTCCTGCACTTGATGAATATGATTTACTTTGAGCACTTGGATGATGTATTGTAAAACTTTCCAATGTGAATTAGGATTATTTGAATGGGTTTCATTGTGGTCTATATTTTGAGAATACACGTATCTAGTACCTAAAC

Coding sequence (CDS)

ATGGTCAAAGAAGCCCTCCAATACTTGGCTCACCTCCGACGAACCTTCCGCTTTCCCACCCCTTTCACCTGCAACAAGCTTCTCCACTCTCTCATCAATTCCGGCTGCGGCCACCTCTCCGCCAAATTGCTTTTCCACTTTCTCTCCAAAGGGTACACTCCTCATCCATCTTCTTTCAATTCCATCATCTCCTTTTTCTGTAGATCAGGAAATGTGAAATTTGCCGAACATATTTTCATTTCTATGTCTAGGTTTGGGTGCTCGCCTGATATTGTGTCCTACAATTCTTTGTTAGATGGGTATTGTTCGAGTTATCAAATTCAGAAAGCCTGCTTTCTTGTGAATAGAGTTCGTGGGTGTGAGTTAAATAGGCCTGATTTGGTGATGTTTAATATACTGTTTAATGGGTTTGCTAAAGTTTATATGAAGAATGAGGCATTTATGTATTTCGGTTTGATGTGGAAATACTGTTTGCCTAGTATTGTTACTTACGGTACGTTTGTTGATATGTTCTGTAAGATGGGGGATATGAAGATGGGTAATAGAATGTTTTTGGATATGATGAAGGTTGGTATTGTGCCTAATTTGGTTGTTTTTAGCTCCTTGATTGATGGCTATTGCAAGGCTGGGAGTTTGGATGTTGCATTTGAATACTTTGAGAGAATGAAAGAATGTTCGGTTCGGCCGAATGAGTTTACATATTCCACGTTGATTGATGGTTGCTCCAAGCATGGGATGTTGGCAAGAGCCGACTCTTTGTTTGAAAAGATGTTGAGTGCTAGTATTCTGCCTAATTGTACGGTTTACACTTCAATAATAGATGGTCATTTTAAGAAGGGAAATGTAGATGATGCGATAAAGTATATTAATCAGATGTTTGATCGAGATATAAAACTAGATTTAACAGCATATACGGTAATTATCTCAGGCTTTCATAGAGTTGGTAGGTTTGATAAATCAATGGAAGCTGCAGAATATGTGGCGAAGAATGGATTACTTCCTGATAGGATAATATTGACAGCTATTATGGATGTCCATTTCAAGGCTGGAAACATAAAAGAAGCTTTGAATGCATACAAAATATTACTCGCAAAGGGTTTTGAGGCTGATGTTGTGACTCTTTCCGCCCTAATGGATGGCCTATCCAAGCATGGGTATTTGCAGGAGGCTAGACGGTATTTGGTCAAAGAAAATGCCAATGAAATTTTATATACAGTGTTTATAGATGCACTATGCAAGGAGGGTAATTTAGATGACGCTGAGAAAATGATTAAGGAGATGTCTGAGGCAGGGTTTGTTCCAGATAAATTTGTGTACACTTCGTGGATTGCTGAACTTTGCAAGCAAGGGAATTTGCTGAAAGCTTTCATGGTTAAGAAAAGGATGGTTCAAGAGCATGTGGAACCTGATTTATTAACTTATAGCTCCCTCATTGGTGGTTTGGCTGAGAAGGGACTAATGATAGAAGCCAAACAGGTTTTTGATGATATGTTAAATAAAGGAATCACTCCAGATTTTGTATCTTATGACATCCTTATTAGAGGATATCATAATCAGGGTAACGGAGCTGCAATTTCAGGTTTACATGACGAAATGAGAAAGAGAGGAATCATTGTTGAAGATTAG

Protein sequence

MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNSIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGCELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGIIVED*

Homology

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BLAST of CSPI05G00530 vs. ExPASy Swiss-Prot
Match: Q9ZUA2 (Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX=3702 GN=At2g01740 PE=3 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 9.3e-162
Identity = 271/540 (50.19%), Postives = 387/540 (71.67%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MV+EALQ+L+ LR++   P PFTCNK +H LINS CG LS K L + +S+GYTPH SSFN
Sbjct: 1   MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
           S++SF C+ G VKFAE I  SM RFGC PD++SYNSL+DG+C +  I+ A  ++  +R  
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120

Query: 121 E--LNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMK 180
              + +PD+V FN LFNGF+K+ M +E F+Y G+M K C P++VTY T++D FCK G+++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180

Query: 181 MGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLI 240
           +  + F  M +  + PN+V F+ LIDGYCKAG L+VA   ++ M+   +  N  TY+ LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240

Query: 241 DGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIK 300
           DG  K G + RA+ ++ +M+   + PN  VYT+IIDG F++G+ D+A+K++ +M ++ ++
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 301 LDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNA 360
           LD+TAY VIISG    G+  ++ E  E + K+ L+PD +I T +M+ +FK+G +K A+N 
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360

Query: 361 YKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLD 420
           Y  L+ +GFE DVV LS ++DG++K+G L EA  Y   E AN+++YTV IDALCKEG+  
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420

Query: 421 DAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLI 480
           + E++  ++SEAG VPDKF+YTSWIA LCKQGNL+ AF +K RMVQE +  DLL Y++LI
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480

Query: 481 GGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGII 539
            GLA KGLM+EA+QVFD+MLN GI+PD   +D+LIR Y  +GN AA S L  +M++RG++
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540

[Close]

BLAST of CSPI05G00530 vs. ExPASy Swiss-Prot
Match: P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-75
Identity = 170/549 (30.97%), Postives = 281/549 (51.18%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           M++EA+Q  + ++R   FP   +CN LLH     G      +     +  G  P   ++N
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQI-QKACFLVNRVRG 120
            +I   C+ G+V+ A  +F  M   G  PD V+YNS++DG+    ++    CF       
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326

Query: 121 CELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCL-PSIVTYGTFVDMFCKMGDMK 180
           C    PD++ +N L N F K         ++  M    L P++V+Y T VD FCK G M+
Sbjct: 327 C--CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 386

Query: 181 MGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLI 240
              + ++DM +VG+VPN   ++SLID  CK G+L  AF     M +  V  N  TY+ LI
Sbjct: 387 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 446

Query: 241 DGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIK 300
           DG      +  A+ LF KM +A ++PN   Y ++I G  K  N+D A++ +N++  R IK
Sbjct: 447 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 506

Query: 301 LDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNA 360
            DL  Y   I G   + + + +      + + G+  + +I T +MD +FK+GN  E L+ 
Sbjct: 507 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 566

Query: 361 YKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKEN------ANEILYTVFIDALC 420
              +     E  VVT   L+DGL K+  + +A  Y  + +      AN  ++T  ID LC
Sbjct: 567 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 626

Query: 421 KEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLL 480
           K+  ++ A  + ++M + G VPD+  YTS +    KQGN+L+A  ++ +M +  ++ DLL
Sbjct: 627 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 686

Query: 481 TYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEM 540
            Y+SL+ GL+    + +A+   ++M+ +GI PD V    +++ ++  G       L   +
Sbjct: 687 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYL 746

Query: 541 RKRGIIVED 542
            K  ++  D
Sbjct: 747 MKHQLLTSD 753

[Close]

BLAST of CSPI05G00530 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.7e-65
Identity = 160/557 (28.73%), Postives = 273/557 (49.01%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRF-PTPFTCNKLLHSLINSGCGHLSAKLLF-HFLSKGYTPHPSS 60
           ++ +AL  + HL +   F P   + N +L + I S      A+ +F   L    +P+  +
Sbjct: 149 LIDKALS-IVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT 208

Query: 61  FNSIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVR 120
           +N +I  FC +GN+  A  +F  M   GC P++V+YN+L+DGYC   +I    F + R  
Sbjct: 209 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG-FKLLRSM 268

Query: 121 GCELNRPDLVMFNILFNGFAKV-YMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDM 180
             +   P+L+ +N++ NG  +   MK  +F+   +  +      VTY T +  +CK G+ 
Sbjct: 269 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 328

Query: 181 KMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTL 240
                M  +M++ G+ P+++ ++SLI   CKAG+++ A E+ ++M+   + PNE TY+TL
Sbjct: 329 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 388

Query: 241 IDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDI 300
           +DG S+ G +  A  +  +M      P+   Y ++I+GH   G ++DAI  +  M ++ +
Sbjct: 389 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 448

Query: 301 KLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALN 360
             D+ +Y+ ++SGF R    D+++     + + G+ PD I  ++++    +    KEA +
Sbjct: 449 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 508

Query: 361 AYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNL 420
            Y+ +L  G   D                              E  YT  I+A C EG+L
Sbjct: 509 LYEEMLRVGLPPD------------------------------EFTYTALINAYCMEGDL 568

Query: 421 DDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYS-- 480
           + A ++  EM E G +PD   Y+  I  L KQ    +A  +  ++  E   P  +TY   
Sbjct: 569 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 628

Query: 481 -------------SLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNG 540
                        SLI G   KG+M EA QVF+ ML K   PD  +Y+I+I G+   G+ 
Sbjct: 629 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 673

[Close]

BLAST of CSPI05G00530 vs. ExPASy Swiss-Prot
Match: Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.9e-62
Identity = 151/526 (28.71%), Postives = 260/526 (49.43%), Query Frame = 0


Query: 24  CNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNSIISFFCRSGNVKFAEHIFISMS 83
           CN L+ SL+  G   L+  +       G   +  + N +++  C+ G ++        + 
Sbjct: 203 CNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262

Query: 84  RFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGCELNRPDLVMFNILFNGFAKVYMK 143
             G  PDIV+YN+L+  Y S   +++A  L+N + G   + P +  +N + NG  K    
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS-PGVYTYNTVINGLCKHGKY 322

Query: 144 NEAFMYFGLMWKYCL-PSIVTYGTFVDMFCKMGDMKMGNRMFLDMMKVGIVPNLVVFSSL 203
             A   F  M +  L P   TY + +   CK GD+    ++F DM    +VP+LV FSS+
Sbjct: 323 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 382

Query: 204 IDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASI 263
           +  + ++G+LD A  YF  +KE  + P+   Y+ LI G  + GM++ A +L  +ML    
Sbjct: 383 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 442

Query: 264 LPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSME 323
             +   Y +I+ G  K+  + +A K  N+M +R +  D    T++I G  ++G    +ME
Sbjct: 443 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 502

Query: 324 AAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYKILLAKGFEADVVTLSALMDGLS 383
             + + +  +  D +    ++D   K G+I  A   +  +++K      ++ S L++ L 
Sbjct: 503 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 562

Query: 384 KHGYLQEARRYLVKENANEILYTV-----FIDALCKEGNLDDAEKMIKEMSEAGFVPDKF 443
             G+L EA R   +  +  I  TV      I   C+ GN  D E  +++M   GFVPD  
Sbjct: 563 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 622

Query: 444 VYTSWIAELCKQGNLLKAFMVKKRMVQEH--VEPDLLTYSSLIGGLAEKGLMIEAKQVFD 503
            Y + I    ++ N+ KAF + K+M +E   + PD+ TY+S++ G   +  M EA+ V  
Sbjct: 623 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 682

Query: 504 DMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGIIVED 542
            M+ +G+ PD  +Y  +I G+ +Q N      +HDEM +RG   +D
Sbjct: 683 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727

[Close]

BLAST of CSPI05G00530 vs. ExPASy Swiss-Prot
Match: Q9CAM8 (Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana OX=3702 GN=At1g63150 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.4e-62
Identity = 149/544 (27.39%), Postives = 268/544 (49.26%), Query Frame = 0


Query: 2   VKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNS 61
           V +A+     + ++  FP+    NKLL ++       L   L     + G +    +++ 
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 62  IISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGCE 121
            I+ FCR   +  A  +   M + G  PDIV+ +SLL+GYC S +I  A  LV+++   E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM--VE 183

Query: 122 LN-RPDLVMFNILFNGFAKVYMKNEAF-MYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKM 181
           +  +PD   F  L +G       +EA  +   ++ + C P +VTYGT V+  CK GD+ +
Sbjct: 184 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 243

Query: 182 GNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLID 241
              +   M    I  N+V+F+++ID  CK   ++VA + F  M+   +RPN  TY++LI+
Sbjct: 244 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 303

Query: 242 GCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKL 301
               +G  + A  L   ML   I PN   + ++ID  FK+G + +A K   +M  R I  
Sbjct: 304 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 363

Query: 302 DLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAY 361
           D   Y ++I+GF    R D++ +  +++     LP+      +++   K   +++ +  +
Sbjct: 364 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 423

Query: 362 KILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEI-----LYTVFIDALCKE 421
           + +  +G   + VT + ++ G  + G    A+    +  +N +      Y++ +  LC  
Sbjct: 424 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 483

Query: 422 GNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTY 481
           G LD A  + K + ++    + F+Y + I  +CK G + +A+ +        ++PD++TY
Sbjct: 484 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL---FCSLSIKPDVVTY 543

Query: 482 SSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRK 539
           +++I GL  K L+ EA  +F  M   G  P+  +Y+ LIR      + AA + L  EMR 
Sbjct: 544 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 602

[Close]

BLAST of CSPI05G00530 vs. ExPASy TrEMBL
Match: A0A1S3BUW7 (pentatricopeptide repeat-containing protein At2g01740 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103493450 PE=4 SV=1)

HSP 1 Score: 1044.6 bits (2700), Expect = 1.4e-301
Identity = 515/541 (95.19%), Postives = 524/541 (96.86%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MVKEALQ+LAHLRR  RFP+PFTCNKLLHSLINSGCGHLSAKLL H LSKGYTPHPSSFN
Sbjct: 1   MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
           SIISFFCRSGNVKFAE IFISMSRFGCSPDIVSYNSLLDGYCSS QIQKACFLVNRVRGC
Sbjct: 61  SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120

Query: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
           ELNRPDLVMFNILF GFAKVYMKNEAFMY GLMWKY LPSIVTYGTFVDMFCKMGDM+MG
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180

Query: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240
           NRMFLDMMKVGIVPNL+VFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD 300
           CSK GMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFD+DIKLD
Sbjct: 241 CSKRGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDQDIKLD 300

Query: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360
           LTAYTVIISGFHRVGRFDKSMEAAEYVAK GLLPDRIILTAIMDVHFKAGNIKEALNAYK
Sbjct: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKKGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360

Query: 361 ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA 420
           ILLAKGFEADV TLSALMDGLSKHGYLQ+ARRY VKE ANEILYTVFIDALCKEGNLD+A
Sbjct: 361 ILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDALCKEGNLDEA 420

Query: 421 EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG 480
           EKMIKEMSEAGFVPDKFVYTS IAELCKQGNLLKAFMVKKRMVQEH+EPDLLTYSSLI G
Sbjct: 421 EKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPDLLTYSSLISG 480

Query: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGIIVE 540
           LAEKGLMIEAKQVFDDMLNKGITPDFV+YDILIRGYHNQGNGAAISGLHDEMRKRGI VE
Sbjct: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVAYDILIRGYHNQGNGAAISGLHDEMRKRGITVE 540

Query: 541 D 542
           D
Sbjct: 541 D 541

[Close]

BLAST of CSPI05G00530 vs. ExPASy TrEMBL
Match: A0A1S3BTQ4 (pentatricopeptide repeat-containing protein At2g01740 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493450 PE=4 SV=1)

HSP 1 Score: 1013.4 bits (2619), Expect = 3.4e-292
Identity = 515/611 (84.29%), Postives = 524/611 (85.76%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MVKEALQ+LAHLRR  RFP+PFTCNKLLHSLINSGCGHLSAKLL H LSKGYTPHPSSFN
Sbjct: 1   MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
           SIISFFCRSGNVKFAE IFISMSRFGCSPDIVSYNSLLDGYCSS QIQKACFLVNRVRGC
Sbjct: 61  SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120

Query: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
           ELNRPDLVMFNILF GFAKVYMKNEAFMY GLMWKY LPSIVTYGTFVDMFCKMGDM+MG
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180

Query: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST---- 240
           NRMFLDMMKVGIVPNL+VFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST    
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 CSKRGMLARADSLFEKMLSASILPNCTVFSSLIDGYCKAGNLDVAFEYFEKMKECSVRPN 300

Query: 301 ------LIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN 360
                 LIDGCSK GMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN
Sbjct: 301 EFTYSRLIDGCSKRGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN 360

Query: 361 QMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAG 420
           QMFD+DIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAK GLLPDRIILTAIMDVHFKAG
Sbjct: 361 QMFDQDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKKGLLPDRIILTAIMDVHFKAG 420

Query: 421 NIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDA 480
           NIKEALNAYKILLAKGFEADV TLSALMDGLSKHGYLQ+ARRY VKE ANEILYTVFIDA
Sbjct: 421 NIKEALNAYKILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDA 480

Query: 481 LCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPD 540
           LCKEGNLD+AEKMIKEMSEAGFVPDKFVYTS IAELCKQGNLLKAFMVKKRMVQEH+EPD
Sbjct: 481 LCKEGNLDEAEKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPD 540

Query: 541 LLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHD 542
           LLTYSSLI GLAEKGLMIEAKQVFDDMLNKGITPDFV+YDILIRGYHNQGNGAAISGLHD
Sbjct: 541 LLTYSSLISGLAEKGLMIEAKQVFDDMLNKGITPDFVAYDILIRGYHNQGNGAAISGLHD 600

[Close]

BLAST of CSPI05G00530 vs. ExPASy TrEMBL
Match: A0A1S3BUK0 (pentatricopeptide repeat-containing protein At2g01740 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493450 PE=4 SV=1)

HSP 1 Score: 1013.4 bits (2619), Expect = 3.4e-292
Identity = 515/611 (84.29%), Postives = 524/611 (85.76%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MVKEALQ+LAHLRR  RFP+PFTCNKLLHSLINSGCGHLSAKLL H LSKGYTPHPSSFN
Sbjct: 1   MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
           SIISFFCRSGNVKFAE IFISMSRFGCSPDIVSYNSLLDGYCSS QIQKACFLVNRVRGC
Sbjct: 61  SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120

Query: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
           ELNRPDLVMFNILF GFAKVYMKNEAFMY GLMWKY LPSIVTYGTFVDMFCKMGDM+MG
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180

Query: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST---- 240
           NRMFLDMMKVGIVPNL+VFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST    
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 CSKRGMLAKADSLFENMLSASILPNCKVFSSLIDGYCKAGNLDVAFEYFEKMKECSVRPN 300

Query: 301 ------LIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN 360
                 LIDGCSK GMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN
Sbjct: 301 EFTYSRLIDGCSKRGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN 360

Query: 361 QMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAG 420
           QMFD+DIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAK GLLPDRIILTAIMDVHFKAG
Sbjct: 361 QMFDQDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKKGLLPDRIILTAIMDVHFKAG 420

Query: 421 NIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDA 480
           NIKEALNAYKILLAKGFEADV TLSALMDGLSKHGYLQ+ARRY VKE ANEILYTVFIDA
Sbjct: 421 NIKEALNAYKILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDA 480

Query: 481 LCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPD 540
           LCKEGNLD+AEKMIKEMSEAGFVPDKFVYTS IAELCKQGNLLKAFMVKKRMVQEH+EPD
Sbjct: 481 LCKEGNLDEAEKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPD 540

Query: 541 LLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHD 542
           LLTYSSLI GLAEKGLMIEAKQVFDDMLNKGITPDFV+YDILIRGYHNQGNGAAISGLHD
Sbjct: 541 LLTYSSLISGLAEKGLMIEAKQVFDDMLNKGITPDFVAYDILIRGYHNQGNGAAISGLHD 600

[Close]

BLAST of CSPI05G00530 vs. ExPASy TrEMBL
Match: A0A5A7UTD7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00420 PE=3 SV=1)

HSP 1 Score: 932.6 bits (2409), Expect = 7.7e-268
Identity = 515/821 (62.73%), Postives = 524/821 (63.82%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MVKEALQ+LAHLRR  RFP+PFTCNKLLHSLINSGCGHLSAKLL H LSKGYTPHPSSFN
Sbjct: 1   MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
           SIISFFCRSGNVKFAE IFISMSRFGCSPDIVSYNSLLDGYCSS QIQKACFLVNRVRGC
Sbjct: 61  SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120

Query: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
           ELNRPDLVMFNILF GFAKVYMKNEAFMY GLMWKY LPSIVTYGTFVDMFCKMGDM+MG
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180

Query: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST---- 240
           NRMFLDMMKVGIVPNL+VFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST    
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 CSKRGMLARADSLFEKMLSASILPNCTVFSSLIDGYCKAGSLDVAFEYFERMKEYSVRPN 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 EFTYSRLIDGCSKHGMLARADSLFENMLSASILPNCRVYNTLIDGYCKAGSLDVALEYFE 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 RMKEFSVQPDEFTYSRLIDGCSKRGMLAKADSLFEKMLSASILPNCRVFSSLIDGYCKAG 420

Query: 421 ------------------------------------------------------------ 480
                                                                       
Sbjct: 421 SLDVALEYFERMKECSVRPDEFTYSRLIDGCSKRGMLAKADSLFENMLSASILPNCKVFS 480

Query: 481 ------------------------------------LIDGCSKHGMLARADSLFEKMLSA 540
                                               LIDGCSK GMLARADSLFEKMLSA
Sbjct: 481 SLIDGYCKAGNLDVAFEYFEKMKECSVRPNEFTYSRLIDGCSKRGMLARADSLFEKMLSA 540

Query: 541 SILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKS 542
           SILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFD+DIKLDLTAYTVIISGFHRVGRFDKS
Sbjct: 541 SILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDQDIKLDLTAYTVIISGFHRVGRFDKS 600

[Close]

BLAST of CSPI05G00530 vs. ExPASy TrEMBL
Match: A0A1S4DZF8 (pentatricopeptide repeat-containing protein At2g01740 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103493450 PE=4 SV=1)

HSP 1 Score: 932.6 bits (2409), Expect = 7.7e-268
Identity = 483/611 (79.05%), Postives = 492/611 (80.52%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MVKEALQ+LAHLRR  RFP+PFTCNKLLHSLINSGCGHLSAKLL H LSKG         
Sbjct: 1   MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKG--------- 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
                                   FGCSPDIVSYNSLLDGYCSS QIQKACFLVNRVRGC
Sbjct: 61  ------------------------FGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120

Query: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
           ELNRPDLVMFNILF GFAKVYMKNEAFMY GLMWKY LPSIVTYGTFVDMFCKMGDM+MG
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180

Query: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST---- 240
           NRMFLDMMKVGIVPNL+VFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST    
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 CSKRGMLAKADSLFENMLSASILPNCKVFSSLIDGYCKAGNLDVAFEYFEKMKECSVRPN 300

Query: 301 ------LIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN 360
                 LIDGCSK GMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN
Sbjct: 301 EFTYSRLIDGCSKRGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN 360

Query: 361 QMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAG 420
           QMFD+DIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAK GLLPDRIILTAIMDVHFKAG
Sbjct: 361 QMFDQDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKKGLLPDRIILTAIMDVHFKAG 420

Query: 421 NIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDA 480
           NIKEALNAYKILLAKGFEADV TLSALMDGLSKHGYLQ+ARRY VKE ANEILYTVFIDA
Sbjct: 421 NIKEALNAYKILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDA 480

Query: 481 LCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPD 540
           LCKEGNLD+AEKMIKEMSEAGFVPDKFVYTS IAELCKQGNLLKAFMVKKRMVQEH+EPD
Sbjct: 481 LCKEGNLDEAEKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPD 540

Query: 541 LLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHD 542
           LLTYSSLI GLAEKGLMIEAKQVFDDMLNKGITPDFV+YDILIRGYHNQGNGAAISGLHD
Sbjct: 541 LLTYSSLISGLAEKGLMIEAKQVFDDMLNKGITPDFVAYDILIRGYHNQGNGAAISGLHD 578

[Close]

BLAST of CSPI05G00530 vs. NCBI nr
Match: XP_011654465.1 (pentatricopeptide repeat-containing protein At2g01740 isoform X1 [Cucumis sativus] >KAE8648176.1 hypothetical protein Csa_018347 [Cucumis sativus])

HSP 1 Score: 1101.3 bits (2847), Expect = 0.0e+00
Identity = 541/541 (100.00%), Postives = 541/541 (100.00%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN
Sbjct: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
           SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC
Sbjct: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120

Query: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
           ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG
Sbjct: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180

Query: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240
           NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG
Sbjct: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD 300
           CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD
Sbjct: 241 CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD 300

Query: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360
           LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK
Sbjct: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360

Query: 361 ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA 420
           ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA
Sbjct: 361 ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA 420

Query: 421 EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG 480
           EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG
Sbjct: 421 EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG 480

Query: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGIIVE 540
           LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGIIVE
Sbjct: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGIIVE 540

Query: 541 D 542
           D
Sbjct: 541 D 541

[Close]

BLAST of CSPI05G00530 vs. NCBI nr
Match: XP_008452410.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X4 [Cucumis melo])

HSP 1 Score: 1044.6 bits (2700), Expect = 2.9e-301
Identity = 515/541 (95.19%), Postives = 524/541 (96.86%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MVKEALQ+LAHLRR  RFP+PFTCNKLLHSLINSGCGHLSAKLL H LSKGYTPHPSSFN
Sbjct: 1   MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
           SIISFFCRSGNVKFAE IFISMSRFGCSPDIVSYNSLLDGYCSS QIQKACFLVNRVRGC
Sbjct: 61  SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120

Query: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
           ELNRPDLVMFNILF GFAKVYMKNEAFMY GLMWKY LPSIVTYGTFVDMFCKMGDM+MG
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180

Query: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240
           NRMFLDMMKVGIVPNL+VFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD 300
           CSK GMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFD+DIKLD
Sbjct: 241 CSKRGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDQDIKLD 300

Query: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360
           LTAYTVIISGFHRVGRFDKSMEAAEYVAK GLLPDRIILTAIMDVHFKAGNIKEALNAYK
Sbjct: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKKGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360

Query: 361 ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA 420
           ILLAKGFEADV TLSALMDGLSKHGYLQ+ARRY VKE ANEILYTVFIDALCKEGNLD+A
Sbjct: 361 ILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDALCKEGNLDEA 420

Query: 421 EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG 480
           EKMIKEMSEAGFVPDKFVYTS IAELCKQGNLLKAFMVKKRMVQEH+EPDLLTYSSLI G
Sbjct: 421 EKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPDLLTYSSLISG 480

Query: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGIIVE 540
           LAEKGLMIEAKQVFDDMLNKGITPDFV+YDILIRGYHNQGNGAAISGLHDEMRKRGI VE
Sbjct: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVAYDILIRGYHNQGNGAAISGLHDEMRKRGITVE 540

Query: 541 D 542
           D
Sbjct: 541 D 541

[Close]

BLAST of CSPI05G00530 vs. NCBI nr
Match: XP_011654466.1 (pentatricopeptide repeat-containing protein At2g01740 isoform X2 [Cucumis sativus])

HSP 1 Score: 1017.3 bits (2629), Expect = 4.9e-293
Identity = 508/541 (93.90%), Postives = 508/541 (93.90%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKG         
Sbjct: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKG--------- 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
                                   FGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC
Sbjct: 61  ------------------------FGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120

Query: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
           ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG
Sbjct: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180

Query: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240
           NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG
Sbjct: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD 300
           CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD
Sbjct: 241 CSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLD 300

Query: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360
           LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK
Sbjct: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360

Query: 361 ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA 420
           ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA
Sbjct: 361 ILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLDDA 420

Query: 421 EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG 480
           EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG
Sbjct: 421 EKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGG 480

Query: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGIIVE 540
           LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGIIVE
Sbjct: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGIIVE 508

Query: 541 D 542
           D
Sbjct: 541 D 508

[Close]

BLAST of CSPI05G00530 vs. NCBI nr
Match: XP_008452406.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X2 [Cucumis melo])

HSP 1 Score: 1013.4 bits (2619), Expect = 7.0e-292
Identity = 515/611 (84.29%), Postives = 524/611 (85.76%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MVKEALQ+LAHLRR  RFP+PFTCNKLLHSLINSGCGHLSAKLL H LSKGYTPHPSSFN
Sbjct: 1   MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
           SIISFFCRSGNVKFAE IFISMSRFGCSPDIVSYNSLLDGYCSS QIQKACFLVNRVRGC
Sbjct: 61  SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120

Query: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
           ELNRPDLVMFNILF GFAKVYMKNEAFMY GLMWKY LPSIVTYGTFVDMFCKMGDM+MG
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180

Query: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST---- 240
           NRMFLDMMKVGIVPNL+VFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST    
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 CSKRGMLARADSLFEKMLSASILPNCTVFSSLIDGYCKAGNLDVAFEYFEKMKECSVRPN 300

Query: 301 ------LIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN 360
                 LIDGCSK GMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN
Sbjct: 301 EFTYSRLIDGCSKRGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN 360

Query: 361 QMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAG 420
           QMFD+DIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAK GLLPDRIILTAIMDVHFKAG
Sbjct: 361 QMFDQDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKKGLLPDRIILTAIMDVHFKAG 420

Query: 421 NIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDA 480
           NIKEALNAYKILLAKGFEADV TLSALMDGLSKHGYLQ+ARRY VKE ANEILYTVFIDA
Sbjct: 421 NIKEALNAYKILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDA 480

Query: 481 LCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPD 540
           LCKEGNLD+AEKMIKEMSEAGFVPDKFVYTS IAELCKQGNLLKAFMVKKRMVQEH+EPD
Sbjct: 481 LCKEGNLDEAEKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPD 540

Query: 541 LLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHD 542
           LLTYSSLI GLAEKGLMIEAKQVFDDMLNKGITPDFV+YDILIRGYHNQGNGAAISGLHD
Sbjct: 541 LLTYSSLISGLAEKGLMIEAKQVFDDMLNKGITPDFVAYDILIRGYHNQGNGAAISGLHD 600

[Close]

BLAST of CSPI05G00530 vs. NCBI nr
Match: XP_008452408.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X1 [Cucumis melo])

HSP 1 Score: 1013.4 bits (2619), Expect = 7.0e-292
Identity = 515/611 (84.29%), Postives = 524/611 (85.76%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MVKEALQ+LAHLRR  RFP+PFTCNKLLHSLINSGCGHLSAKLL H LSKGYTPHPSSFN
Sbjct: 1   MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
           SIISFFCRSGNVKFAE IFISMSRFGCSPDIVSYNSLLDGYCSS QIQKACFLVNRVRGC
Sbjct: 61  SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120

Query: 121 ELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKMG 180
           ELNRPDLVMFNILF GFAKVYMKNEAFMY GLMWKY LPSIVTYGTFVDMFCKMGDM+MG
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180

Query: 181 NRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST---- 240
           NRMFLDMMKVGIVPNL+VFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYST    
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 CSKRGMLAKADSLFENMLSASILPNCKVFSSLIDGYCKAGNLDVAFEYFEKMKECSVRPN 300

Query: 301 ------LIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN 360
                 LIDGCSK GMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN
Sbjct: 301 EFTYSRLIDGCSKRGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN 360

Query: 361 QMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAG 420
           QMFD+DIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAK GLLPDRIILTAIMDVHFKAG
Sbjct: 361 QMFDQDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKKGLLPDRIILTAIMDVHFKAG 420

Query: 421 NIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDA 480
           NIKEALNAYKILLAKGFEADV TLSALMDGLSKHGYLQ+ARRY VKE ANEILYTVFIDA
Sbjct: 421 NIKEALNAYKILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDA 480

Query: 481 LCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPD 540
           LCKEGNLD+AEKMIKEMSEAGFVPDKFVYTS IAELCKQGNLLKAFMVKKRMVQEH+EPD
Sbjct: 481 LCKEGNLDEAEKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPD 540

Query: 541 LLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHD 542
           LLTYSSLI GLAEKGLMIEAKQVFDDMLNKGITPDFV+YDILIRGYHNQGNGAAISGLHD
Sbjct: 541 LLTYSSLISGLAEKGLMIEAKQVFDDMLNKGITPDFVAYDILIRGYHNQGNGAAISGLHD 600

[Close]

BLAST of CSPI05G00530 vs. TAIR 10
Match: AT2G01740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 571.6 bits (1472), Expect = 6.6e-163
Identity = 271/540 (50.19%), Postives = 387/540 (71.67%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           MV+EALQ+L+ LR++   P PFTCNK +H LINS CG LS K L + +S+GYTPH SSFN
Sbjct: 1   MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGC 120
           S++SF C+ G VKFAE I  SM RFGC PD++SYNSL+DG+C +  I+ A  ++  +R  
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120

Query: 121 E--LNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDMK 180
              + +PD+V FN LFNGF+K+ M +E F+Y G+M K C P++VTY T++D FCK G+++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180

Query: 181 MGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLI 240
           +  + F  M +  + PN+V F+ LIDGYCKAG L+VA   ++ M+   +  N  TY+ LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240

Query: 241 DGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIK 300
           DG  K G + RA+ ++ +M+   + PN  VYT+IIDG F++G+ D+A+K++ +M ++ ++
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 301 LDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNA 360
           LD+TAY VIISG    G+  ++ E  E + K+ L+PD +I T +M+ +FK+G +K A+N 
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360

Query: 361 YKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNLD 420
           Y  L+ +GFE DVV LS ++DG++K+G L EA  Y   E AN+++YTV IDALCKEG+  
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420

Query: 421 DAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLI 480
           + E++  ++SEAG VPDKF+YTSWIA LCKQGNL+ AF +K RMVQE +  DLL Y++LI
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480

Query: 481 GGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGII 539
            GLA KGLM+EA+QVFD+MLN GI+PD   +D+LIR Y  +GN AA S L  +M++RG++
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540

[Close]

BLAST of CSPI05G00530 vs. TAIR 10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 284.3 bits (726), Expect = 2.1e-76
Identity = 170/549 (30.97%), Postives = 281/549 (51.18%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFN 60
           M++EA+Q  + ++R   FP   +CN LLH     G      +     +  G  P   ++N
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYN 266

Query: 61  SIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQI-QKACFLVNRVRG 120
            +I   C+ G+V+ A  +F  M   G  PD V+YNS++DG+    ++    CF       
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326

Query: 121 CELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCL-PSIVTYGTFVDMFCKMGDMK 180
           C    PD++ +N L N F K         ++  M    L P++V+Y T VD FCK G M+
Sbjct: 327 C--CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 386

Query: 181 MGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLI 240
              + ++DM +VG+VPN   ++SLID  CK G+L  AF     M +  V  N  TY+ LI
Sbjct: 387 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 446

Query: 241 DGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIK 300
           DG      +  A+ LF KM +A ++PN   Y ++I G  K  N+D A++ +N++  R IK
Sbjct: 447 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 506

Query: 301 LDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNA 360
            DL  Y   I G   + + + +      + + G+  + +I T +MD +FK+GN  E L+ 
Sbjct: 507 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 566

Query: 361 YKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKEN------ANEILYTVFIDALC 420
              +     E  VVT   L+DGL K+  + +A  Y  + +      AN  ++T  ID LC
Sbjct: 567 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 626

Query: 421 KEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLL 480
           K+  ++ A  + ++M + G VPD+  YTS +    KQGN+L+A  ++ +M +  ++ DLL
Sbjct: 627 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 686

Query: 481 TYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEM 540
            Y+SL+ GL+    + +A+   ++M+ +GI PD V    +++ ++  G       L   +
Sbjct: 687 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYL 746

Query: 541 RKRGIIVED 542
            K  ++  D
Sbjct: 747 MKHQLLTSD 753

[Close]

BLAST of CSPI05G00530 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 250.4 bits (638), Expect = 3.4e-66
Identity = 160/557 (28.73%), Postives = 273/557 (49.01%), Query Frame = 0


Query: 1   MVKEALQYLAHLRRTFRF-PTPFTCNKLLHSLINSGCGHLSAKLLF-HFLSKGYTPHPSS 60
           ++ +AL  + HL +   F P   + N +L + I S      A+ +F   L    +P+  +
Sbjct: 149 LIDKALS-IVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFT 208

Query: 61  FNSIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVR 120
           +N +I  FC +GN+  A  +F  M   GC P++V+YN+L+DGYC   +I    F + R  
Sbjct: 209 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG-FKLLRSM 268

Query: 121 GCELNRPDLVMFNILFNGFAKV-YMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMGDM 180
             +   P+L+ +N++ NG  +   MK  +F+   +  +      VTY T +  +CK G+ 
Sbjct: 269 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 328

Query: 181 KMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTL 240
                M  +M++ G+ P+++ ++SLI   CKAG+++ A E+ ++M+   + PNE TY+TL
Sbjct: 329 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 388

Query: 241 IDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDI 300
           +DG S+ G +  A  +  +M      P+   Y ++I+GH   G ++DAI  +  M ++ +
Sbjct: 389 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 448

Query: 301 KLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALN 360
             D+ +Y+ ++SGF R    D+++     + + G+ PD I  ++++    +    KEA +
Sbjct: 449 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 508

Query: 361 AYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDALCKEGNL 420
            Y+ +L  G   D                              E  YT  I+A C EG+L
Sbjct: 509 LYEEMLRVGLPPD------------------------------EFTYTALINAYCMEGDL 568

Query: 421 DDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTYS-- 480
           + A ++  EM E G +PD   Y+  I  L KQ    +A  +  ++  E   P  +TY   
Sbjct: 569 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 628

Query: 481 -------------SLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNG 540
                        SLI G   KG+M EA QVF+ ML K   PD  +Y+I+I G+   G+ 
Sbjct: 629 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 673

[Close]

BLAST of CSPI05G00530 vs. TAIR 10
Match: AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 240.4 bits (612), Expect = 3.5e-63
Identity = 151/526 (28.71%), Postives = 260/526 (49.43%), Query Frame = 0


Query: 24  CNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNSIISFFCRSGNVKFAEHIFISMS 83
           CN L+ SL+  G   L+  +       G   +  + N +++  C+ G ++        + 
Sbjct: 203 CNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262

Query: 84  RFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGCELNRPDLVMFNILFNGFAKVYMK 143
             G  PDIV+YN+L+  Y S   +++A  L+N + G   + P +  +N + NG  K    
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS-PGVYTYNTVINGLCKHGKY 322

Query: 144 NEAFMYFGLMWKYCL-PSIVTYGTFVDMFCKMGDMKMGNRMFLDMMKVGIVPNLVVFSSL 203
             A   F  M +  L P   TY + +   CK GD+    ++F DM    +VP+LV FSS+
Sbjct: 323 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 382

Query: 204 IDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASI 263
           +  + ++G+LD A  YF  +KE  + P+   Y+ LI G  + GM++ A +L  +ML    
Sbjct: 383 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 442

Query: 264 LPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSME 323
             +   Y +I+ G  K+  + +A K  N+M +R +  D    T++I G  ++G    +ME
Sbjct: 443 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 502

Query: 324 AAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAYKILLAKGFEADVVTLSALMDGLS 383
             + + +  +  D +    ++D   K G+I  A   +  +++K      ++ S L++ L 
Sbjct: 503 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 562

Query: 384 KHGYLQEARRYLVKENANEILYTV-----FIDALCKEGNLDDAEKMIKEMSEAGFVPDKF 443
             G+L EA R   +  +  I  TV      I   C+ GN  D E  +++M   GFVPD  
Sbjct: 563 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 622

Query: 444 VYTSWIAELCKQGNLLKAFMVKKRMVQEH--VEPDLLTYSSLIGGLAEKGLMIEAKQVFD 503
            Y + I    ++ N+ KAF + K+M +E   + PD+ TY+S++ G   +  M EA+ V  
Sbjct: 623 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 682

Query: 504 DMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRKRGIIVED 542
            M+ +G+ PD  +Y  +I G+ +Q N      +HDEM +RG   +D
Sbjct: 683 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727

[Close]

BLAST of CSPI05G00530 vs. TAIR 10
Match: AT1G63150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 239.6 bits (610), Expect = 5.9e-63
Identity = 149/544 (27.39%), Postives = 268/544 (49.26%), Query Frame = 0


Query: 2   VKEALQYLAHLRRTFRFPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNS 61
           V +A+     + ++  FP+    NKLL ++       L   L     + G +    +++ 
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 62  IISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVRGCE 121
            I+ FCR   +  A  +   M + G  PDIV+ +SLL+GYC S +I  A  LV+++   E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM--VE 183

Query: 122 LN-RPDLVMFNILFNGFAKVYMKNEAF-MYFGLMWKYCLPSIVTYGTFVDMFCKMGDMKM 181
           +  +PD   F  L +G       +EA  +   ++ + C P +VTYGT V+  CK GD+ +
Sbjct: 184 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 243

Query: 182 GNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLID 241
              +   M    I  N+V+F+++ID  CK   ++VA + F  M+   +RPN  TY++LI+
Sbjct: 244 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 303

Query: 242 GCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDIKL 301
               +G  + A  L   ML   I PN   + ++ID  FK+G + +A K   +M  R I  
Sbjct: 304 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 363

Query: 302 DLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGNIKEALNAY 361
           D   Y ++I+GF    R D++ +  +++     LP+      +++   K   +++ +  +
Sbjct: 364 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 423

Query: 362 KILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEI-----LYTVFIDALCKE 421
           + +  +G   + VT + ++ G  + G    A+    +  +N +      Y++ +  LC  
Sbjct: 424 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 483

Query: 422 GNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDLLTY 481
           G LD A  + K + ++    + F+Y + I  +CK G + +A+ +        ++PD++TY
Sbjct: 484 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL---FCSLSIKPDVVTY 543

Query: 482 SSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGNGAAISGLHDEMRK 539
           +++I GL  K L+ EA  +F  M   G  P+  +Y+ LIR      + AA + L  EMR 
Sbjct: 544 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 602

The following BLAST results are available for this feature:

BLAST of CSPI05G00530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUA2	9.3e-162	50.19	Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX...	[more]
P0C894	3.0e-75	30.97	Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th...	[more]
Q9FIX3	4.7e-65	28.73	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LFC5	4.9e-62	28.71	Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX...	[more]
Q9CAM8	8.4e-62	27.39	Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana OX...	[more]

BLAST of CSPI05G00530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUW7	1.4e-301	95.19	pentatricopeptide repeat-containing protein At2g01740 isoform X4 OS=Cucumis melo...	[more]
A0A1S3BTQ4	3.4e-292	84.29	pentatricopeptide repeat-containing protein At2g01740 isoform X2 OS=Cucumis melo...	[more]
A0A1S3BUK0	3.4e-292	84.29	pentatricopeptide repeat-containing protein At2g01740 isoform X1 OS=Cucumis melo...	[more]
A0A5A7UTD7	7.7e-268	62.73	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DZF8	7.7e-268	79.05	pentatricopeptide repeat-containing protein At2g01740 isoform X3 OS=Cucumis melo...	[more]

BLAST of CSPI05G00530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654465.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At2g01740 isoform X1 [Cucumis sativu...	[more]
XP_008452410.1	2.9e-301	95.19	PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X4 [Cuc...	[more]
XP_011654466.1	4.9e-293	93.90	pentatricopeptide repeat-containing protein At2g01740 isoform X2 [Cucumis sativu...	[more]
XP_008452406.1	7.0e-292	84.29	PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X2 [Cuc...	[more]
XP_008452408.1	7.0e-292	84.29	PREDICTED: pentatricopeptide repeat-containing protein At2g01740 isoform X1 [Cuc...	[more]

BLAST of CSPI05G00530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01740.1	6.6e-163	50.19	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G02150.1	2.1e-76	30.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G39710.1	3.4e-66	28.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G01110.1	3.5e-63	28.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G63150.1	5.9e-63	27.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 339..367 e-value: 1.0 score: 9.8 coord: 162..192 e-value: 0.0045 score: 17.1 coord: 128..155 e-value: 0.86 score: 10.0 coord: 372..394 e-value: 0.066 score: 13.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 58..103 e-value: 4.2E-11 score: 42.9 coord: 264..312 e-value: 2.5E-9 score: 37.2 coord: 476..517 e-value: 2.3E-8 score: 34.1 coord: 194..243 e-value: 1.1E-15 score: 57.5 coord: 400..448 e-value: 1.9E-9 score: 37.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 232..266 e-value: 6.2E-9 score: 33.5 coord: 58..91 e-value: 2.7E-7 score: 28.3 coord: 438..470 e-value: 3.0E-5 score: 21.9 coord: 268..300 e-value: 6.6E-7 score: 27.1 coord: 473..505 e-value: 2.7E-7 score: 28.3 coord: 162..195 e-value: 2.1E-6 score: 25.6 coord: 403..435 e-value: 2.4E-10 score: 37.9 coord: 197..231 e-value: 1.1E-9 score: 35.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 400..434 score: 12.92343
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 470..504 score: 12.364404
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 435..469 score: 9.536388
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 505..539 score: 9.152743
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 55..89 score: 11.027125
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 265..299 score: 9.777537
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 230..264 score: 12.221907
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 160..194 score: 10.829822
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 300..334 score: 9.492543
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 195..229 score: 12.802855
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 465..540 e-value: 5.7E-17 score: 63.6 coord: 1..144 e-value: 1.2E-24 score: 88.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 145..258 e-value: 4.1E-33 score: 117.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 259..323 e-value: 1.9E-12 score: 49.1 coord: 324..397 e-value: 6.7E-12 score: 47.3 coord: 398..464 e-value: 1.3E-14 score: 56.2
None	No IPR available	PANTHER	PTHR45613:SF401	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 2..539
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 2..539
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 202..396

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G00530.1	CSPI05G00530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding