CSPI04G25060 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G25060
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DNA binding
Location	Chr4: 22592815 .. 22594591 (-)
RNA-Seq Expression	CSPI04G25060
Synteny	CSPI04G25060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCATTTTCAAATTTTGAGAGGAAAAATCCCACAACGGTTGCTTTCAGCCGCGAAAAAACGCCGGCGGGGACGGAAGCGGCAACGTTTAGTAAGGTGCAATGATGGAGTTTTCAATCTCCGATCCAACTCTCTGGAGAGAAGCTCTCTCTACTTATTCATCTCAGATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTTCCCCTTATTCTCCACAAGCGAAACCCTAGCCCTTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGTGCTCAGTTATCTGTATCACATTCTTTTCATTTAGGTTTCGATGATTATTTATCAATTTTATCTACAACGATTTTACGAATTTCAGGCCTCGTCTCTTGGATTTTGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTTTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCGGTTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGTGAAATCATGATGTATATTTATGCAATCATTATCCGTAGCCATTGATTTCTGCAAAAAGTTTTGAATATCTGTTATGCCTAGATTTCTAACTTATAGTGGTGAAGAAATAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTACTATTCGCAAATAAATTGGAACAAAAAGCCAAGGTCTGTCAGCTTTTTCCATTTCCATCCTTTCAACCTTCATGCGCCAATTTCATTATTTTTTTTTACATTGACATTGCTGACTTTCTTACTAGCTTCGCTCTGCAAAGGTCTGTTTCTCAAAGCCATGATCGATATGGTTTAGCATTCTAGAATTGAACTGTTGTTTCAAACTTTGAGTGTATTGTATACAAGCATATGCTATAATAAATATAGTCTTGTGTGACTCGTGCTTCATTTGTGAATGTACAATATGTAAAGATCTGCATTTAGTATATTTTCTCGATTTATATATATGGGCTTGTGTATCTTGTGAGATTAACAACCTTGGAACGTGGAATAAATGAAGGCGTGAGTTAAACACAAGCTTGATTTCTGCATCTTAGACTAAGCTTAACTTAAAGTCAAACATTCTAATTGTTCAAGGAAGTGGTTACAAATTTTTTCTGTTTGTTGGACTGTTTTGAAACTGTTCCAACGCTCCGAAAGACGAAGTAGGGGTCTCACTATTTGAAGTATCTATTGTAGCTAATACATTATTGGTGAATCACGGAAATCTGGATGTTGATTCACTGTTGTTTTACACTTTTTTTTAGTTATTTCTTGACATTGTTCTTTATGGGAGATGGTCATTTGCAGGAATTAAGCTTAGAAGGAGAAATTTTCACACCATCTGATGTAGAGAGGGCTTTGTGGAGTAGGGCTATAGGGGAAAAATTGAAAGGTTCAAAATCACAATTAGATCCTAACAATGGAGGCAAAACTGGAACCAAAAGAAAGAGAAAAACTTCCAAGTGACATCCACTACCAATGGCTTTTGAGTTTTGTACTTCTGGTTTTGGACATGCAGCTGATGTTGGCCTTTCAGGTTTATTCATTACTGCAACAATCTAACTTCTATTCCTTAACTTACAATGTAAAATTGCAAATACTGCCTTGAAGATCATGTTTGATGGTATCTAATTGAAACTTTCACCC

mRNA sequence

GGCATTTTCAAATTTTGAGAGGAAAAATCCCACAACGGTTGCTTTCAGCCGCGAAAAAACGCCGGCGGGGACGGAAGCGGCAACGTTTAGTAAGGTGCAATGATGGAGTTTTCAATCTCCGATCCAACTCTCTGGAGAGAAGCTCTCTCTACTTATTCATCTCAGATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTTCCCCTTATTCTCCACAAGCGAAACCCTAGCCCTTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGCCTCGTCTCTTGGATTTTGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTTTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCGGTTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTACTATTCGCAAATAAATTGGAACAAAAAGCCAAGGAATTAAGCTTAGAAGGAGAAATTTTCACACCATCTGATGTAGAGAGGGCTTTGTGGAGTAGGGCTATAGGGGAAAAATTGAAAGGTTCAAAATCACAATTAGATCCTAACAATGGAGGCAAAACTGGAACCAAAAGAAAGAGAAAAACTTCCAAGTGACATCCACTACCAATGGCTTTTGAGTTTTGTACTTCTGGTTTTGGACATGCAGCTGATGTTGGCCTTTCAGGTTTATTCATTACTGCAACAATCTAACTTCTATTCCTTAACTTACAATGTAAAATTGCAAATACTGCCTTGAAGATCATGTTTGATGGTATCTAATTGAAACTTTCACCC

Coding sequence (CDS)

ATGATGGAGTTTTCAATCTCCGATCCAACTCTCTGGAGAGAAGCTCTCTCTACTTATTCATCTCAGATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTTCCCCTTATTCTCCACAAGCGAAACCCTAGCCCTTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGCCTCGTCTCTTGGATTTTGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTTTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCGGTTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTACTATTCGCAAATAAATTGGAACAAAAAGCCAAGGAATTAAGCTTAGAAGGAGAAATTTTCACACCATCTGATGTAGAGAGGGCTTTGTGGAGTAGGGCTATAGGGGAAAAATTGAAAGGTTCAAAATCACAATTAGATCCTAACAATGGAGGCAAAACTGGAACCAAAAGAAAGAGAAAAACTTCCAAGTGA

Protein sequence

MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPSDVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK*

Homology

[Close]

BLAST of CSPI04G25060 vs. ExPASy TrEMBL
Match: A0A0A0L3W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645280 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 4.3e-116
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60
           MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL
Sbjct: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180

Query: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 221
           DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK
Sbjct: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 220

[Close]

BLAST of CSPI04G25060 vs. ExPASy TrEMBL
Match: A0A1S3BUF7 (uncharacterized protein LOC103493629 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493629 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.2e-111
Identity = 210/219 (95.89%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPSD 181
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAKELSLEGE FTPSD
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180

Query: 182 VERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 221
           VERALWSRAIGEKLKGS+SQLDPNNGGKTGTKRKRKTSK
Sbjct: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 219

[Close]

BLAST of CSPI04G25060 vs. ExPASy TrEMBL
Match: A0A6J1ILC1 (uncharacterized protein LOC111477273 OS=Cucurbita maxima OX=3661 GN=LOC111477273 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.4e-103
Identity = 196/218 (89.91%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60
           M+EF+ SDP LW EALS+Y SQIEALGKPNLVSLDDFYRNELP +LHKRNPSPYITTSEL
Sbjct: 1   MVEFAHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRL DFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLFDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FA KL+ KAKELS EG+IFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLTFAKKLQDKAKELSSEGQIFTPS 180

Query: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKT 219
           DVERALWS AIGEK+KGS+SQLDP NGGK G KRKRKT
Sbjct: 181 DVERALWSTAIGEKVKGSQSQLDPKNGGKAGAKRKRKT 218

[Close]

BLAST of CSPI04G25060 vs. ExPASy TrEMBL
Match: A0A6J1F8K0 (uncharacterized protein LOC111443296 OS=Cucurbita moschata OX=3662 GN=LOC111443296 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.3e-101
Identity = 195/217 (89.86%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           MEFS SDP LW EALS+Y S+IEALGKPNLVSLD+FYRNELP +LHKRNPSPYITTSELS
Sbjct: 1   MEFSHSDPGLWSEALSSYPSRIEALGKPNLVSLDEFYRNELPPLLHKRNPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPSD 181
           SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FA KL+ KAKELS EG+IFTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQIFTPSD 180

Query: 182 VERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKT 219
           VERALWS AIGEK+KGS+SQL   NGGKTG+KRKRKT
Sbjct: 181 VERALWSTAIGEKVKGSQSQLGSKNGGKTGSKRKRKT 217

[Close]

BLAST of CSPI04G25060 vs. ExPASy TrEMBL
Match: A0A5A7VB62 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001890 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.4e-98
Identity = 187/195 (95.90%), Postives = 192/195 (98.46%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPSD 181
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAKELSLEGE FTPSD
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180

Query: 182 VERALWSRAIGEKLK 197
           VERALWSRAIGEKLK
Sbjct: 181 VERALWSRAIGEKLK 195

[Close]

BLAST of CSPI04G25060 vs. NCBI nr
Match: XP_004141302.1 (uncharacterized protein LOC101204707 [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 8.8e-116
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60
           MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL
Sbjct: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180

Query: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 221
           DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK
Sbjct: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 220

[Close]

BLAST of CSPI04G25060 vs. NCBI nr
Match: XP_008452684.1 (PREDICTED: uncharacterized protein LOC103493629 isoform X1 [Cucumis melo])

HSP 1 Score: 411.0 bits (1055), Expect = 6.5e-111
Identity = 210/219 (95.89%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPSD 181
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAKELSLEGE FTPSD
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180

Query: 182 VERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 221
           VERALWSRAIGEKLKGS+SQLDPNNGGKTGTKRKRKTSK
Sbjct: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 219

[Close]

BLAST of CSPI04G25060 vs. NCBI nr
Match: XP_038898858.1 (uncharacterized protein LOC120086335 isoform X1 [Benincasa hispida])

HSP 1 Score: 401.7 bits (1031), Expect = 4.0e-108
Identity = 206/220 (93.64%), Postives = 211/220 (95.91%), Query Frame = 0


Query: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60
           MMEFS SDPTLWREALS+YSSQIEALGKPNL SLDDFYRNELP +LHKRNP+PYITTSEL
Sbjct: 1   MMEFSNSDPTLWREALSSYSSQIEALGKPNLASLDDFYRNELPRLLHKRNPNPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDI KAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDIFKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FANKL+ KAKELS EGEIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGEIFTPS 180

Query: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 221
           DVERALWSRAIGEKLKG KS+LDPNNGGKTG KRKRKTSK
Sbjct: 181 DVERALWSRAIGEKLKGPKSELDPNNGGKTGIKRKRKTSK 220

[Close]

BLAST of CSPI04G25060 vs. NCBI nr
Match: KAG6591445.1 (hypothetical protein SDJN03_13791, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 388.3 bits (996), Expect = 4.5e-104
Identity = 199/218 (91.28%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60
           M+EFS SDP LW EALS+Y SQIEALGKPNLVSLDDFYRNELP +LHKRNPSPYITTSEL
Sbjct: 1   MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FA KL+ KAKELS EG+IFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQIFTPS 180

Query: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKT 219
           DVERALWS AIGEK+KGS+SQLDP NGGKTG+KRKRKT
Sbjct: 181 DVERALWSTAIGEKVKGSQSQLDPKNGGKTGSKRKRKT 218

[Close]

BLAST of CSPI04G25060 vs. NCBI nr
Match: XP_023536029.1 (uncharacterized protein LOC111797290 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.4 bits (986), Expect = 6.5e-103
Identity = 197/218 (90.37%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60
           M+EFS S+P LW EAL +Y SQIEALGKPNLVSLDDFYRNELP +LHKRNPSPYITTSEL
Sbjct: 1   MVEFSHSEPGLWSEALCSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FA KL+ KAKELS EG+IFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQIFTPS 180

Query: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKT 219
           DVERALWS AIGEK+KGS+SQLDP NGGKTG KRKRKT
Sbjct: 181 DVERALWSTAIGEKVKGSQSQLDPKNGGKTGAKRKRKT 218

[Close]

BLAST of CSPI04G25060 vs. TAIR 10
Match: AT3G12210.2 (DNA binding )

HSP 1 Score: 286.6 bits (732), Expect = 1.7e-77
Identity = 150/215 (69.77%), Postives = 175/215 (81.40%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           +EF  SD  +W+EALS+Y S+IE+L KP LVSLD FYR +LP +LH R+P+PY+TTSELS
Sbjct: 3   LEFKCSDVGVWKEALSSYDSRIESLNKPELVSLDQFYRIKLPCLLHDRDPNPYLTTSELS 62

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           +LM+WKL+RGKWRPRLLDFVSSLD+S+VK AS+KAF+ LPDISKAV ELT LKGVG ATA
Sbjct: 63  QLMKWKLSRGKWRPRLLDFVSSLDDSVVKSASEKAFKSLPDISKAVKELTVLKGVGAATA 122

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPSD 181
           SAVLAAYAPD+APFMSDEAME ALGNSKDYSLKQYLLFA KL+ KAKEL L+GE   PSD
Sbjct: 123 SAVLAAYAPDIAPFMSDEAMEVALGNSKDYSLKQYLLFATKLQDKAKELKLKGEWDGPSD 182

Query: 182 VERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKR 217
           +ERALWS  +  K +  KS         +G KRKR
Sbjct: 183 IERALWSCTVRAKSQPEKS--------SSGKKRKR 209

[Close]

BLAST of CSPI04G25060 vs. TAIR 10
Match: AT3G12210.1 (DNA binding )

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-54
Identity = 103/138 (74.64%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61
           +EF  SD  +W+EALS+Y S+IE+L KP LVSLD FYR +LP +LH R+P+PY+TTSELS
Sbjct: 3   LEFKCSDVGVWKEALSSYDSRIESLNKPELVSLDQFYRIKLPCLLHDRDPNPYLTTSELS 62

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           +LM+WKL+RGKWRPRLLDFVSSLD+S+VK AS+KAF+ LPDISKAV ELT LKGVG ATA
Sbjct: 63  QLMKWKLSRGKWRPRLLDFVSSLDDSVVKSASEKAFKSLPDISKAVKELTVLKGVGAATA 122

Query: 122 SAVLAAYAPDVAPFMSDE 140
           SAVLAAYAPD+APFMSDE
Sbjct: 123 SAVLAAYAPDIAPFMSDE 140

The following BLAST results are available for this feature:

BLAST of CSPI04G25060 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G25060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3W6	4.3e-116	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645280 PE=4 SV=1	[more]
A0A1S3BUF7	3.2e-111	95.89	uncharacterized protein LOC103493629 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1ILC1	5.4e-103	89.91	uncharacterized protein LOC111477273 OS=Cucurbita maxima OX=3661 GN=LOC111477273...	[more]
A0A6J1F8K0	1.3e-101	89.86	uncharacterized protein LOC111443296 OS=Cucurbita moschata OX=3662 GN=LOC1114432...	[more]
A0A5A7VB62	1.4e-98	95.90	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CSPI04G25060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141302.1	8.8e-116	100.00	uncharacterized protein LOC101204707 [Cucumis sativus]	[more]
XP_008452684.1	6.5e-111	95.89	PREDICTED: uncharacterized protein LOC103493629 isoform X1 [Cucumis melo]	[more]
XP_038898858.1	4.0e-108	93.64	uncharacterized protein LOC120086335 isoform X1 [Benincasa hispida]	[more]
KAG6591445.1	4.5e-104	91.28	hypothetical protein SDJN03_13791, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023536029.1	6.5e-103	90.37	uncharacterized protein LOC111797290 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI04G25060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12210.2	1.7e-77	69.77	DNA binding	[more]
AT3G12210.1	1.2e-54	74.64	DNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 153..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..220
None	No IPR available	PANTHER	PTHR21521	UNCHARACTERIZED	coord: 2..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G25060.1	CSPI04G25060.1	mRNA