CSPI04G24440 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G24440
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Formin-like protein 20
Location	Chr4: 22204813 .. 22208151 (+)
RNA-Seq Expression	CSPI04G24440
Synteny	CSPI04G24440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCCATTACTGAAGCAAGTAAATATACGTCGACAGCAACAGTAATTTTGGAAAAAGAAGGCGGTCTTCACTTCTCCAATGATATTAATCTTGACACGTGGGTTGGCCCTCTACCACCATTCGCCAATCTCCACCTTTTTGGATTTGATATTATAACAAACACCTTCCGTGCAGCAAGTTGGTTAAGCCCAGAAACGAGGCCTAAGCTGAACCTGGGTTCTTGCTTTTGAGTTTCTACTTCTTCGTCTCAATTACTAAAATAACAACTAGTAATTCCTCTCACAAAAAGTGGTTTCAGAGGTGGGAGTGAAGCTTTAGCCACCAATACAATCGCCCACTCAATAATAAGATTCTGATTCATCTCTTCTGTCTTTCTGTCTCAAAGATTTTACCGACTCCATTCTCATGGTTCCGAAGTTTAAAAGAAACGTGCCTAACTTTACAAACGCTTCAACCATCTTACTCATATTTTAAGAGACATCAAAACAGATATTAGGACTCCAAATTCAATTCAATCAAATAAAATAGGTTTATCTTACCTTCCTACCATTCTTTTTTTACTTTTATCATATTCTCAAAATATTAGTTTTCATTTCAAAAAGTCACTATTTTCATTATTTAATTTTCTTTTTCAAGAGATCAAATTGTCACACTTCAATGGTTCAACTACAGAAACAAACCATATTAAAAAATACGTCCATACAAATGAACAAAAACTAAAAATATAAAAATTAAAATAAACATTTTAATATATAAGAATAAAAATATAAAATTCAAAATAATATTTAAATCGAATAATATGTATTTATCAAGCAAACTTTGATTTGGATCACATCCTATAGTACTAAAAAAATATATAGAGTTCATTGTGCACCATATACATCATGAGGGAAAAAGCCGAAAGGTGGAATGACTAACCCAATAGAATATGGGCCTCAAAATGAAGAAATATGGTATTTCGTAGCATTGGCCCAACTCCATTTTTTGACCCAATAGAATGGAACTTAACTCCAGCCTGGGTAAAGATTATTTAAGACTAATAATCAGTCACTTCTTGTTATCTTGATATCGAATTTAAAAATATCTTTACAATAAATATTATTTTAAAATTTTCAATTTGATATGATATTTATTTTCTATCATTTTTATAATTTGACATTAATAATAATTTTTTTACTAATTTTTTATTAAATTAAAATAGTATACACGTCAAACACAAACTATTATAATCAAATTGTAACAACTTGATACTATAATAATCCACTTTTGACCTCGTCACACTGGCTAGATGTTTGATTTAGAAATGAACTTTTTTAACACCATTACCTTTTTTAGATTTAAGTGGGACATATGAATTTGAACAAAGTTGAAAGTTTAGGTCCATGTCAATTAGGATTTTTTTTTTTTTTTTGTTATTTATGTGTTATTCTTAATAAAGAAAATTAAATCTAGATTCAAAACAGTGTTTACTTTGGCTAAATTGTTTTATAAAATACTCTAAAAGTTAAAATATGGTTTTAAATTATAACTAGAAGAAGAAGAGAAAGAGGCAATAATAATGATAGGTGAGATCCTGATTAGGAATTGGGAGGAAAATGAGAGTGGAATTTTGGAGTTTAGACAAATTTCAGCTCTGACACTTTCCTCCAATATTAAATAAACAATCTACAAAATGAATGAATTATGTCACATTAAAAACAATACATGTTCTAAAGAATCCTTCTTACAAGTTGACTTCACAAATTTAGATTATTTAATTAGTTTGAAATATGATAGAAAAAGCTGTTGAATTTTCTCCCATTCCCATCTTCTTTGATACTTCCACCCATAAACTTGTCTTTTACTAACACAACCAATCGAAGCAGGGGTCATCAATATCCACAACTGCATTTACCCAGAAATCCAAACTGCAAATATATTTTAAGAGTTTGACAGAAGAAGAAGATCATGGCATTCTGGGGAGGATCCCAACGGCAAATCAGACGGTTGCTTGAGGTCACAGGCACGTAAATTTTACTCATAAACCATTCTTGATCTTCATTATCCTCTTTATTTCATTGTTTTCCCTTTTCTCATCGGTTCTACAGTTGATCGATGCTACAACTTGGAGGATACAGAGCCATTTGCAACTGATTACTCATGTGTCCTTGTATATGGCGGTTCCATGAGGAGGACCCGACCATGCTTTGGTACGTATGTGGTTTTAATTTTGGGAATTCAAATTCAAATGAAATCACTCTGTGAATTGAATGATTCATTAGGTAAAGGTATACACCCAGTGTTCGAGGAGAAATTCGTTTTTGAATTCACTGAGAAAGATGTAGAATTGAACATTTGGGTATTGGCCAATAAGCCCACAAGAAACGAGGAAGTTATTGGTTCTCTAAGGTAAGAACTCGGCCTTAGGATTTGGTAACGTTCTGTACATATAACAATAACAAATTTTCATAATTTTTTGCATTGTCCCTTTAGAGTTCAGCTCCAACAACTAATTTTTGATGGTCATGTTGACTCTACCTGGACTCTTCAGAAAACAGATGGCAGGTACAAATTAGCAATAAGTTAAAAATTATATATAGAATTGCTTCTTCGTAAGTTAAGTTTGTTATCATGGCAGGCCTGCAGGTTACTTACGGCTCACAATGCAAATCCCCACTTCCAGTTGTAGAGTAATCTCCATTTCCTATACAACTATTTATTGATCAATGACAAGTGCAATAGTAGTTATTTGTTTTTGTTTTGATTTGGTGTAGTTAGAGCGCCAAGACTCGTATTACACAGCGCCAAGGTTGGATTCTACAGCTCCTCCCGAAGCAGATGGAACCCAACGCCCAATTTTGTACAACCTCCTACCATATGGCGCCCGTCCCCCGCCGAGCCCAACGCAGCCAAATGAGTCTGCCCCTGCTCTTTGGTCCCAATTCCTGCCATATGGTTCTCCACCACCAACTGCCTCTGCCTACAATACAACCACTGCTCCCCCTGCAGGCTACCCAATTCATTCTCCCCCTGCAGGCTACCCATTTCATGCTCCCCCTCCACCAGGTACTTTTTCATTTCTTCATTAAATCTTTCAAACTAGAGCTCAAAATGGCTGATTAAACATCACAAGTTTCAGGTTCAAGCTTCCCCGGCATTTACCCACCTCCATCGCGCTAACGACTTACCTCAGCATGTTCTGTAGATTAAACGTGAGAAAGCTTTCACTGTGCTAATCGATCACTAAAAATTATTCTTTGATGTGATTATATCTCCATTTTTAATTTGTGGTAATAAAGGACGATGGAGTGATGACTGTTGGGTGGTTTTTATTGATGTATTTATGATCTAGGGAG

mRNA sequence

ATGCCTCCCATTACTGAAGCAAGTAAATATACGTCGACAGCAACAGTAATTTTGGAAAAAGAAGGCGGTCTTCACTTCTCCAATGATATTAATCTTGACACGTGGGTTGGCCCTCTACCACCATTCGCCAATCTCCACCTTTTTGGATTTGATATTATAACAAACACCTTCCGTGCAGCAAGTTGGTTAAGCCCAGAAACGAGGCCTAAGCTGAACCTGGAGTTTGACAGAAGAAGAAGATCATGGCATTCTGGGGAGGATCCCAACGGCAAATCAGACGGTTGCTTGAGGTCACAGGCACTTGATCGATGCTACAACTTGGAGGATACAGAGCCATTTGCAACTGATTACTCATGTGTCCTTGTATATGGCGGTTCCATGAGGAGGACCCGACCATGCTTTGGTAAAGGTATACACCCAGTGTTCGAGGAGAAATTCGTTTTTGAATTCACTGAGAAAGATGTAGAATTGAACATTTGGGTATTGGCCAATAAGCCCACAAGAAACGAGGAAGTTATTGGTTCTCTAAGAGTTCAGCTCCAACAACTAATTTTTGATGGTCATGTTGACTCTACCTGGACTCTTCAGAAAACAGATGGCAGGCCTGCAGGTTACTTACGGCTCACAATGCAAATCCCCACTTCCAGTTGTAGATTAGAGCGCCAAGACTCGTATTACACAGCGCCAAGGTTGGATTCTACAGCTCCTCCCGAAGCAGATGGAACCCAACGCCCAATTTTGTACAACCTCCTACCATATGGCGCCCGTCCCCCGCCGAGCCCAACGCAGCCAAATGAGTCTGCCCCTGCTCTTTGGTCCCAATTCCTGCCATATGGTTCTCCACCACCAACTGCCTCTGCCTACAATACAACCACTGCTCCCCCTGCAGGCTACCCAATTCATTCTCCCCCTGCAGGCTACCCATTTCATGCTCCCCCTCCACCAGGTTCAAGCTTCCCCGGCATTTACCCACCTCCATCGCGCTAACGACTTACCTCAGCATGTTCTGTAGATTAAACGTGAGAAAGCTTTCACTGTGCTAATCGATCACTAAAAATTATTCTTTGATGTGATTATATCTCCATTTTTAATTTGTGGTAATAAAGGACGATGGAGTGATGACTGTTGGGTGGTTTTTATTGATGTATTTATGATCTAGGGAG

Coding sequence (CDS)

ATGCCTCCCATTACTGAAGCAAGTAAATATACGTCGACAGCAACAGTAATTTTGGAAAAAGAAGGCGGTCTTCACTTCTCCAATGATATTAATCTTGACACGTGGGTTGGCCCTCTACCACCATTCGCCAATCTCCACCTTTTTGGATTTGATATTATAACAAACACCTTCCGTGCAGCAAGTTGGTTAAGCCCAGAAACGAGGCCTAAGCTGAACCTGGAGTTTGACAGAAGAAGAAGATCATGGCATTCTGGGGAGGATCCCAACGGCAAATCAGACGGTTGCTTGAGGTCACAGGCACTTGATCGATGCTACAACTTGGAGGATACAGAGCCATTTGCAACTGATTACTCATGTGTCCTTGTATATGGCGGTTCCATGAGGAGGACCCGACCATGCTTTGGTAAAGGTATACACCCAGTGTTCGAGGAGAAATTCGTTTTTGAATTCACTGAGAAAGATGTAGAATTGAACATTTGGGTATTGGCCAATAAGCCCACAAGAAACGAGGAAGTTATTGGTTCTCTAAGAGTTCAGCTCCAACAACTAATTTTTGATGGTCATGTTGACTCTACCTGGACTCTTCAGAAAACAGATGGCAGGCCTGCAGGTTACTTACGGCTCACAATGCAAATCCCCACTTCCAGTTGTAGATTAGAGCGCCAAGACTCGTATTACACAGCGCCAAGGTTGGATTCTACAGCTCCTCCCGAAGCAGATGGAACCCAACGCCCAATTTTGTACAACCTCCTACCATATGGCGCCCGTCCCCCGCCGAGCCCAACGCAGCCAAATGAGTCTGCCCCTGCTCTTTGGTCCCAATTCCTGCCATATGGTTCTCCACCACCAACTGCCTCTGCCTACAATACAACCACTGCTCCCCCTGCAGGCTACCCAATTCATTCTCCCCCTGCAGGCTACCCATTTCATGCTCCCCCTCCACCAGGTTCAAGCTTCCCCGGCATTTACCCACCTCCATCGCGCTAA

Protein sequence

MPPITEASKYTSTATVILEKEGGLHFSNDINLDTWVGPLPPFANLHLFGFDIITNTFRAASWLSPETRPKLNLEFDRRRRSWHSGEDPNGKSDGCLRSQALDRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIWVLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGYLRLTMQIPTSSCRLERQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPNESAPALWSQFLPYGSPPPTASAYNTTTAPPAGYPIHSPPAGYPFHAPPPPGSSFPGIYPPPSR*

Homology

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BLAST of CSPI04G24440 vs. ExPASy TrEMBL
Match: A0A5D3D9I0 (Formin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003060 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 5.4e-123
Identity = 217/243 (89.30%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 86  EDPNGKSDGCLRSQALDRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCFGKGIHPVFEEK 145
           EDPNGKSDGCLRSQALDRCYNLEDTEPFAT+YSCVL+YGGSMRRTRPCFGKGIHPVFEEK
Sbjct: 6   EDPNGKSDGCLRSQALDRCYNLEDTEPFATEYSCVLIYGGSMRRTRPCFGKGIHPVFEEK 65

Query: 146 FVFEFTEKDVELNIWVLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGY 205
           FVFEFTEKDVELNIWVLANKPTRN+EVIGSLR+QLQQL+ DGHVDSTWTLQKTD RPAGY
Sbjct: 66  FVFEFTEKDVELNIWVLANKPTRNDEVIGSLRIQLQQLLSDGHVDSTWTLQKTDDRPAGY 125

Query: 206 LRLTMQIPTSSCRLERQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPN 265
           LRLTMQIPTSSCRLERQDSYYTAPRLDSTAPPEA+GTQRPIL+ LLPYG RPPPSPTQPN
Sbjct: 126 LRLTMQIPTSSCRLERQDSYYTAPRLDSTAPPEAEGTQRPILHQLLPYGGRPPPSPTQPN 185

Query: 266 ESAPALWSQFLPYGSPPPTASAYNTTTAPPAGYPIHSPPAGYPFHAPPPPGSSFPGIYPP 325
           ESA ALWSQFLPYGSPPPTASAYN TTAPPAGYPI         H PPPPGS  PGIYPP
Sbjct: 186 ESAAALWSQFLPYGSPPPTASAYNPTTAPPAGYPI---------HPPPPPGSISPGIYPP 239

Query: 326 PSR 329
           P R
Sbjct: 246 PPR 239

[Close]

BLAST of CSPI04G24440 vs. ExPASy TrEMBL
Match: A0A1S3BVD9 (formin-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103493572 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.9e-113
Identity = 201/228 (88.16%), Postives = 209/228 (91.67%), Query Frame = 0


Query: 101 LDRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIW 160
           +DRCYNLEDTEPFAT+YSCVL+YGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIW
Sbjct: 20  VDRCYNLEDTEPFATEYSCVLIYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIW 79

Query: 161 VLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGYLRLTMQIPTSSCRLE 220
           VLANKPTRN+EVIGSLR+QLQQL+ DGHVDSTWTLQKTD RPAGYLRLTMQIPTSSCRLE
Sbjct: 80  VLANKPTRNDEVIGSLRIQLQQLLSDGHVDSTWTLQKTDDRPAGYLRLTMQIPTSSCRLE 139

Query: 221 RQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPNESAPALWSQFLPYGS 280
           RQDSYYTAPRLDSTAPPEA+GTQRPIL+ LLPYG RPPPSPTQPNESA ALWSQFLPYGS
Sbjct: 140 RQDSYYTAPRLDSTAPPEAEGTQRPILHQLLPYGGRPPPSPTQPNESAAALWSQFLPYGS 199

Query: 281 PPPTASAYNTTTAPPAGYPIHSPPAGYPFHAPPPPGSSFPGIYPPPSR 329
           PPPTASAYN TTAPPAGYPI         H PPPPGS  PGIYPPP R
Sbjct: 200 PPPTASAYNPTTAPPAGYPI---------HPPPPPGSISPGIYPPPPR 238

[Close]

BLAST of CSPI04G24440 vs. ExPASy TrEMBL
Match: A0A5A7V8F4 (Formin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001210 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 3.4e-109
Identity = 196/222 (88.29%), Postives = 203/222 (91.44%), Query Frame = 0


Query: 107 LEDTEPFATDYSCVLVYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIWVLANKP 166
           LEDTEPFAT+YSCVL+YGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIWVLANKP
Sbjct: 16  LEDTEPFATEYSCVLIYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIWVLANKP 75

Query: 167 TRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGYLRLTMQIPTSSCRLERQDSYY 226
           TRN+EVIGSLR+QLQQL+ DGHVDSTWTLQKTD RPAGYLRLTMQIPTSSCRLERQDSYY
Sbjct: 76  TRNDEVIGSLRIQLQQLLSDGHVDSTWTLQKTDDRPAGYLRLTMQIPTSSCRLERQDSYY 135

Query: 227 TAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPNESAPALWSQFLPYGSPPPTAS 286
           TAPRLDSTAPPEA+GTQRPIL+ LLPYG RPPPSPTQPNESA ALWSQFLPYGSPPPTAS
Sbjct: 136 TAPRLDSTAPPEAEGTQRPILHQLLPYGGRPPPSPTQPNESAAALWSQFLPYGSPPPTAS 195

Query: 287 AYNTTTAPPAGYPIHSPPAGYPFHAPPPPGSSFPGIYPPPSR 329
           AYN TTAPPAGYPI         H PPPPGS  PGIYPPP R
Sbjct: 196 AYNPTTAPPAGYPI---------HPPPPPGSISPGIYPPPPR 228

[Close]

BLAST of CSPI04G24440 vs. ExPASy TrEMBL
Match: A0A6J1FKR0 (ribonucleoprotein RB97D-like OS=Cucurbita moschata OX=3662 GN=LOC111446314 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 6.0e-66
Identity = 140/235 (59.57%), Postives = 161/235 (68.51%), Query Frame = 0


Query: 101 LDRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIW 160
           +DRCYNLED  PFAT+Y+C+L+YGGS +RTRPCFG G HP+FEEKFVFEF E  VELNIW
Sbjct: 12  VDRCYNLEDRGPFATEYTCILMYGGSTKRTRPCFGGGSHPIFEEKFVFEFIEGVVELNIW 71

Query: 161 VLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGYLRLTMQIPTSSCRLE 220
           VL N+ + N E +G LRV+LQQ++F+G+VDSTWTL  TDGRPAG +RLT+Q P SS R +
Sbjct: 72  VLTNRSSGNVEALGVLRVELQQVLFNGYVDSTWTLHGTDGRPAGSIRLTLQFPPSS-RFQ 131

Query: 221 RQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPT-----------------Q 280
            Q S Y AP LDSTAP      Q PILY LLPY ARPPP P                  Q
Sbjct: 132 GQGSIYEAPTLDSTAP--VGTPQAPILYQLLPYDARPPPRPASFVGPNASYPPNSAVAQQ 191

Query: 281 PNESAPAL-WSQFLPYGSPPPT--ASAYNTTTAPPAGYPI-HSPPAGYPFHAPPP 315
           PN + PA  WSQFLPYGSP P   A AYN+TT PP GYP+   PP   PF   PP
Sbjct: 192 PNGTGPAAQWSQFLPYGSPSPAAPACAYNSTTTPPLGYPLPQYPPGLNPFDIYPP 243

[Close]

BLAST of CSPI04G24440 vs. ExPASy TrEMBL
Match: A0A0A0KZU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641630 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-46
Identity = 99/110 (90.00%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 219 LERQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPNESAPALWSQFLPY 278
           LERQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPNESA ALWSQFLPY
Sbjct: 19  LERQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPNESAAALWSQFLPY 78

Query: 279 GSPPPTASAYNTTTAPPAGYPIHSPPAGYPFHAPPPPGSSFPGIYPPPSR 329
           GSPPPT SAYNTTTAPPAGYPIHS         PPPPGSSFPGIYPPPSR
Sbjct: 79  GSPPPTTSAYNTTTAPPAGYPIHS---------PPPPGSSFPGIYPPPSR 119

[Close]

BLAST of CSPI04G24440 vs. NCBI nr
Match: XP_011654133.2 (actin cytoskeleton-regulatory complex protein PAN1 isoform X2 [Cucumis sativus] >KAE8649868.1 hypothetical protein Csa_012904 [Cucumis sativus])

HSP 1 Score: 469.2 bits (1206), Expect = 3.0e-128
Identity = 223/228 (97.81%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 101 LDRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIW 160
           +DRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIW
Sbjct: 19  VDRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIW 78

Query: 161 VLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGYLRLTMQIPTSSCRLE 220
           VLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGYLRLTMQIPTSSCRLE
Sbjct: 79  VLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGYLRLTMQIPTSSCRLE 138

Query: 221 RQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPNESAPALWSQFLPYGS 280
           RQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPNESA ALWSQFLPYGS
Sbjct: 139 RQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPNESAAALWSQFLPYGS 198

Query: 281 PPPTASAYNTTTAPPAGYPIHSPPAGYPFHAPPPPGSSFPGIYPPPSR 329
           PPPT SAYNTTTAPPAGYPIHSPPAGYP H+PPPPGSSFPGIYPPPSR
Sbjct: 199 PPPTTSAYNTTTAPPAGYPIHSPPAGYPIHSPPPPGSSFPGIYPPPSR 246

[Close]

BLAST of CSPI04G24440 vs. NCBI nr
Match: XP_011654132.2 (actin cytoskeleton-regulatory complex protein PAN1 isoform X1 [Cucumis sativus])

HSP 1 Score: 455.7 bits (1171), Expect = 3.4e-124
Identity = 223/252 (88.49%), Postives = 225/252 (89.29%), Query Frame = 0


Query: 101 LDRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCF------------------------GK 160
           +DRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCF                        GK
Sbjct: 19  VDRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCFGTYVVLILGIQIQMKSLCELNDSLGK 78

Query: 161 GIHPVFEEKFVFEFTEKDVELNIWVLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQ 220
           GIHPVFEEKFVFEFTEKDVELNIWVLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQ
Sbjct: 79  GIHPVFEEKFVFEFTEKDVELNIWVLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQ 138

Query: 221 KTDGRPAGYLRLTMQIPTSSCRLERQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGAR 280
           KTDGRPAGYLRLTMQIPTSSCRLERQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGAR
Sbjct: 139 KTDGRPAGYLRLTMQIPTSSCRLERQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGAR 198

Query: 281 PPPSPTQPNESAPALWSQFLPYGSPPPTASAYNTTTAPPAGYPIHSPPAGYPFHAPPPPG 329
           PPPSPTQPNESA ALWSQFLPYGSPPPT SAYNTTTAPPAGYPIHSPPAGYP H+PPPPG
Sbjct: 199 PPPSPTQPNESAAALWSQFLPYGSPPPTTSAYNTTTAPPAGYPIHSPPAGYPIHSPPPPG 258

[Close]

BLAST of CSPI04G24440 vs. NCBI nr
Match: TYK20174.1 (formin-like protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-122
Identity = 217/243 (89.30%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 86  EDPNGKSDGCLRSQALDRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCFGKGIHPVFEEK 145
           EDPNGKSDGCLRSQALDRCYNLEDTEPFAT+YSCVL+YGGSMRRTRPCFGKGIHPVFEEK
Sbjct: 6   EDPNGKSDGCLRSQALDRCYNLEDTEPFATEYSCVLIYGGSMRRTRPCFGKGIHPVFEEK 65

Query: 146 FVFEFTEKDVELNIWVLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGY 205
           FVFEFTEKDVELNIWVLANKPTRN+EVIGSLR+QLQQL+ DGHVDSTWTLQKTD RPAGY
Sbjct: 66  FVFEFTEKDVELNIWVLANKPTRNDEVIGSLRIQLQQLLSDGHVDSTWTLQKTDDRPAGY 125

Query: 206 LRLTMQIPTSSCRLERQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPN 265
           LRLTMQIPTSSCRLERQDSYYTAPRLDSTAPPEA+GTQRPIL+ LLPYG RPPPSPTQPN
Sbjct: 126 LRLTMQIPTSSCRLERQDSYYTAPRLDSTAPPEAEGTQRPILHQLLPYGGRPPPSPTQPN 185

Query: 266 ESAPALWSQFLPYGSPPPTASAYNTTTAPPAGYPIHSPPAGYPFHAPPPPGSSFPGIYPP 325
           ESA ALWSQFLPYGSPPPTASAYN TTAPPAGYPI         H PPPPGS  PGIYPP
Sbjct: 186 ESAAALWSQFLPYGSPPPTASAYNPTTAPPAGYPI---------HPPPPPGSISPGIYPP 239

Query: 326 PSR 329
           P R
Sbjct: 246 PPR 239

[Close]

BLAST of CSPI04G24440 vs. NCBI nr
Match: XP_008452599.1 (PREDICTED: formin-like protein 20 [Cucumis melo])

HSP 1 Score: 418.3 bits (1074), Expect = 6.1e-113
Identity = 201/228 (88.16%), Postives = 209/228 (91.67%), Query Frame = 0


Query: 101 LDRCYNLEDTEPFATDYSCVLVYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIW 160
           +DRCYNLEDTEPFAT+YSCVL+YGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIW
Sbjct: 20  VDRCYNLEDTEPFATEYSCVLIYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIW 79

Query: 161 VLANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGYLRLTMQIPTSSCRLE 220
           VLANKPTRN+EVIGSLR+QLQQL+ DGHVDSTWTLQKTD RPAGYLRLTMQIPTSSCRLE
Sbjct: 80  VLANKPTRNDEVIGSLRIQLQQLLSDGHVDSTWTLQKTDDRPAGYLRLTMQIPTSSCRLE 139

Query: 221 RQDSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPNESAPALWSQFLPYGS 280
           RQDSYYTAPRLDSTAPPEA+GTQRPIL+ LLPYG RPPPSPTQPNESA ALWSQFLPYGS
Sbjct: 140 RQDSYYTAPRLDSTAPPEAEGTQRPILHQLLPYGGRPPPSPTQPNESAAALWSQFLPYGS 199

Query: 281 PPPTASAYNTTTAPPAGYPIHSPPAGYPFHAPPPPGSSFPGIYPPPSR 329
           PPPTASAYN TTAPPAGYPI         H PPPPGS  PGIYPPP R
Sbjct: 200 PPPTASAYNPTTAPPAGYPI---------HPPPPPGSISPGIYPPPPR 238

[Close]

BLAST of CSPI04G24440 vs. NCBI nr
Match: KAA0064413.1 (formin-like protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 7.0e-109
Identity = 196/222 (88.29%), Postives = 203/222 (91.44%), Query Frame = 0


Query: 107 LEDTEPFATDYSCVLVYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIWVLANKP 166
           LEDTEPFAT+YSCVL+YGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIWVLANKP
Sbjct: 16  LEDTEPFATEYSCVLIYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIWVLANKP 75

Query: 167 TRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGYLRLTMQIPTSSCRLERQDSYY 226
           TRN+EVIGSLR+QLQQL+ DGHVDSTWTLQKTD RPAGYLRLTMQIPTSSCRLERQDSYY
Sbjct: 76  TRNDEVIGSLRIQLQQLLSDGHVDSTWTLQKTDDRPAGYLRLTMQIPTSSCRLERQDSYY 135

Query: 227 TAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSPTQPNESAPALWSQFLPYGSPPPTAS 286
           TAPRLDSTAPPEA+GTQRPIL+ LLPYG RPPPSPTQPNESA ALWSQFLPYGSPPPTAS
Sbjct: 136 TAPRLDSTAPPEAEGTQRPILHQLLPYGGRPPPSPTQPNESAAALWSQFLPYGSPPPTAS 195

Query: 287 AYNTTTAPPAGYPIHSPPAGYPFHAPPPPGSSFPGIYPPPSR 329
           AYN TTAPPAGYPI         H PPPPGS  PGIYPPP R
Sbjct: 196 AYNPTTAPPAGYPI---------HPPPPPGSISPGIYPPPPR 228

[Close]

BLAST of CSPI04G24440 vs. TAIR 10
Match: AT4G34150.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 96.3 bits (238), Expect = 4.9e-20
Identity = 81/245 (33.06%), Postives = 114/245 (46.53%), Query Frame = 0


Query: 104 CYNLEDTEPFA-TDYSCVLVYGGSMRRTRPCFGKGIHPVFEEKFVFEFTEKDVELNIWVL 163
           C  L+DTE F+  D   VL YGG   RTR C   G + VF+EKF+F   E   +L + V 
Sbjct: 19  CQKLKDTEWFSRQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTLIEGLRDLKVAVW 78

Query: 164 ANKPTRNEEVIGSLRVQLQQLIFDGHVDSTWTLQKTDGRPAGYLRLTMQIPTSSCRLERQ 223
            +     ++ IG+  +QLQ+++   + D TWTLQ   GR AG ++L +    +     ++
Sbjct: 79  NSNTLSTDDFIGNATIQLQKVLSQEYDDCTWTLQSKTGRFAGEVQLLLHYAGA-----KK 138

Query: 224 DSYYTAPRLDSTAPPEADGTQRPILYNLLPYGARPPPSP--TQPNESAPALWSQFLPYGS 283
            +Y +AP               P   ++  Y A P  SP  T P  S P+L+ Q   Y  
Sbjct: 139 HNYGSAP-------------SAPYAPHVPQYSAPPSASPYSTAPPYSGPSLYPQVQQYPQ 198

Query: 284 P---------PPTASAY---NTTTAP--PAGYPIHSPPAGYPFHAPPP-----PGSSFPG 327
           P         PP  SAY   +T+  P  P+ YP   P + YP    PP     P   +PG
Sbjct: 199 PSGYPPASGYPPQPSAYPPPSTSGYPPIPSAYPPPPPSSAYPPQPYPPQPSYYPQGPYPG 245

The following BLAST results are available for this feature:

BLAST of CSPI04G24440 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G24440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D9I0	5.4e-123	89.30	Formin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3BVD9	2.9e-113	88.16	formin-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103493572 PE=4 SV=1	[more]
A0A5A7V8F4	3.4e-109	88.29	Formin-like protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A6J1FKR0	6.0e-66	59.57	ribonucleoprotein RB97D-like OS=Cucurbita moschata OX=3662 GN=LOC111446314 PE=4 ...	[more]
A0A0A0KZU8	1.8e-46	90.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641630 PE=4 SV=1	[more]

BLAST of CSPI04G24440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654133.2	3.0e-128	97.81	actin cytoskeleton-regulatory complex protein PAN1 isoform X2 [Cucumis sativus] ...	[more]
XP_011654132.2	3.4e-124	88.49	actin cytoskeleton-regulatory complex protein PAN1 isoform X1 [Cucumis sativus]	[more]
TYK20174.1	1.1e-122	89.30	formin-like protein 20 [Cucumis melo var. makuwa]	[more]
XP_008452599.1	6.1e-113	88.16	PREDICTED: formin-like protein 20 [Cucumis melo]	[more]
KAA0064413.1	7.0e-109	88.29	formin-like protein 20 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI04G24440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34150.1	4.9e-20	33.06	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 87..213 e-value: 1.2E-11 score: 47.1
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 103..212
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 115..193 e-value: 8.5E-8 score: 32.4
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 76..194 score: 9.505573
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..328
None	No IPR available	PANTHER	PTHR47052	CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790)	coord: 101..325
None	No IPR available	CDD	cd00030	C2	coord: 103..193 e-value: 1.7053E-6 score: 43.9799

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G24440.1	CSPI04G24440.1	mRNA