CSPI04G23220 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTGAGTTGGTAATATGACAGATTGTTCTAAGTGTTCTTTAACAGCGTAGTTATTTTAACCTTAGAAAAGAAAGAAGAAAAGGAGGAGTAAGCCCTAAGCCCTTTATTCTTCCCGCCAGCACTTCCCTTCTCCAGCTGCCGAGTGTCGCCGCCGAACCGCCGCTCCATCTCTCTGGTTCAGTGCTTCCACTGCTGTGTTTCATCCTCTCCTCCCGCTGGAGCCTCCTTCTATTCCTTTGTTTCTGCTGCTATTCTCATATTGAAATACTTCGTACGTGAGTTGTTTGACGAAATGCCTGGGAGTTCTTTTTTTCTTTCTGTTATATGATATCAGAGTGTTGCTTTGTTGTTTGTCGTGTTACAGGGACTTAATTAGCTTTGAGTATGAGTAGCGAGGTAGATGCTCTTAAAAATGTAGAAGGCTACAAACCTCCAGCAGAGTTTGAGGAAGACAAAAGGGAATTTCTTACTGATATTTCTTTGACTGACTCTGAAGAGTTGTGGCTTATTCAATGGCCTGCTAACCAAGTAAGATATTATAAACTTATCTTGAAAAATGTTACATCTACCTGCAGTTTGGAAGAAATTAAAATGAAGAACGATCCATAAATGTGCTCTTTTTTAATTTTTTCAAGATTAAGTTTGTTACAGTCATTTCAAACACTGTTTAATTTGAGAGGGATTTATTCTTTTCTTCAATGGGTATCGTAGGCCCCAGATTTTGATGGGCAAGAATTTTCTCTTCAACTTTACCCAGATGGACATATGGGCAGCTTTCAGGGTTCATCAGGTAACTATCATTTTGTTATCTATTTACTTCTTTTTCTTTCTAAAGAAACAATTTCTTTGATTTTTTAAATTAAAAAATGATATAACATGGAGCTACAATAAGCTATCTTAATGGTTTAGAAGGGAAGCGTATACGAAGCAAAAAGGTTAGAGCTTTTATTTACACCAAGAAATAACATATTAAATAATAAGATCAAAGGAAGTATCATCAGGACGATCCTTTAAGACGTTTTGATTTTTTTGCTCTCACAGCACCCAAAAGAGAGCACAAGATATATGCAACCACAAAAGAGCTTTTGTATTATTGAATGGGTGACTCAAGAGAATGGAGTTGAGTTATGTAGTAACGTCTCTAGGAAAAGCCAAAAACTATCCAAAAGCATCGTGAAGTTCTCCAGAATTTCCGAGTAAAAGAATGGAGGAAGAGGTGGTTTTTTTTATTCATCATCAGTTCTGCAAATAGAACCACACAGAGATATGGCCGTATTAAACATTCTTTTTTTAAGAGCACCGTTGGTGGAAATGGCCTTGTGAGCCAATTCCCATTTCTAGGGTATTTCTCTTTCCATATTCCTGTAGCCAAATATGTCTCCAAAATATTGTTTCTATCACCCGTATCAGCTAAAAGAAAATTTCTAGAAAGTGTCCTTCAGGATTGAGAGGTCATTTCGAAGCATCTATTGCCATCGAGACTAAAACCATATTGAGGTCTCAAAAGTTGTTATTGACATTAGTCTTCACTCAGGATTGAGGTCTCAAAAGTGTCTCTTGAGAACAAGGGTTGCCTGGTTACCCAATTTAAGGTGATATGCTGAACCGGATTTTATTTTTAATAAGCTCCCTTCGTTAAGCATCCTTTCTGTGCTTATAAGTTATATCTCAAATCCATTTAGCACAAAGGGCTTGGTTTTTTTCTCTCATAGGGTATGCCCGAGGCCTCTTTGATTATCAGGATGAAGAGGTTTAGACAATTAACCAGATAATGTTGGTGGAAGCTCTTTGCCTGTTTTAATGTAAGAGGTTTTCACTGTGTGAAAATATACACTGTTCTTTTTATTGAACTCTACTGCATCTCAATATGAGGTATATAAACACTACACAAAGATGCAAAACAAATGGAAAAATTGAGAAGCTAACTGCTAATTGATTAAATTTGGAAGGTTATTAAGTGCAGATAATTACAACAGGAAAATGCATAAATATATAAAACTGAATATATAAAAAATTGGCAGTAGTTTCAAGGGAAATTGTGATTGAAGAATATTCTGTCAAGGCCCAATCTTTGGTGCTTTCAATCATGGAGTGAGAACCTCGCCGAAGGAGAATCAATGTCTTAATTGGGGCAAATTGATTTTTTAACTGATATCCATGAGTGTTCGGGCCAGCTTATGAACACAATCAAGCATTCTTTAATCAATTGGGCCAATCGACTTAAGTTGTACTTTCAGGATATCAAGGGTGAGTCGTGGTAATTACCAAACTTGAGGTGTTAGTTGTCAATCTAATATGACAGTTGGGTAAGCAGACTCGATGGAACTTGATTCCCCTTTTTTACAATATTGTTCTGCCCAATAGGGTTGTCTGATGATTGCTTCTGCTATGAATCTGAACATTGTTGTAATGAAGTTTGATTTTTTGAATTTAATGTGGTTGCAATAAACTTTGTGCTTTTGATGATGAGTAGCTTTCAACTCTTCCTTGGTTTCCTCCTCTTCCACGAGTGCTAAAATTTCTACCTCTTCCTCTAGATCCACTCTTATGATTAAAGAAGGCTTGGTTGTGCTCAATTTGAGAGTGCTTTTCTTCTTCATTATGGACCGCATGTTCACAATCCAAACTCTTTACTCATTATTCAGTCCAAGACACACATCTCAATTGGAATGCTTTTGTTTCTCCAGCTTAATTTGCGCTTACATTTTAATAATGTCTTGCCATAGAACCCTTTGATGTATTACATTTTGAGATGGTTGGGTGGATCCACTGACCCTACTCTTCACATGTACTACTCTGTGATCATTATGTCTCATATTTTGAGCATTAAACTTTTCTTCACTATATCAATGAAATTTTTTTGTTTCCGTTTAAAGAAACCAATTAACAAAATATTGCTCTTTGCCATTTAGCGCACCTTTCCAAAGGAAATTCCTAGATTTTTTTTTTTTTAATCTCTTTTCTAATCTTAATAGCCAAGGAAAAATTGTAGGGGTACGTTTGGAAGATTTGAAAGTGTAGCTTGTACGAGAGTGAGCCTTCCCCCTTTTAAAGGTGAATCCCCATGCATAATCTTTTCTCAAAATTTTCAGTGATCACCCAGTGTCCAAAAAGCTGTGGCTTTTGGCCAACCATGTAACGGGTGACCAAAGTAAGAATGGGGCCAATAACCTCTTTTGCATCCGTATTTGAAAGCTAATTCATCAACGATGTCCAGTTCAACATTGATACTGATAAATCCAGACTTTTGGAGGTGATGTTTTCCTAGGATGCCTTCTCAAAAGCCTCAATCTCATTAGAAAGTGAACAAAGTGACTCGTCCATCAAAATCAGAGAAAAGATTGTCAATGACTATGAGGGGACAATCTTCTTGACGTCCATTTTTCTTGACTCTGTTTTTCTTTTTCTTTTCTTTTTTTAAAATGAGAAACAGTCAATCATAATATCATTGATGAGAAATAGTCAATCATAATTGAAGAACTCTTTTTTTTTTCTCATTGCACAAATGAATAACTTCATGTAATCTCACTGGATTTGTGCCATTTTTCTCGACTCTTTGAATTATTCTATTATCAATTGTTTCAAATAACAGTTGGTGCATGAATATGCTCGAAGTATTTTTGTTTGAATGTGCACTACAGCTATTCTGTTCATTTTCTCCGTACAATAATATCAATCTATTTTTGTTTTCATCAAAAGGAAAATCATATGATGTGATCAGCTGTGTGGCTCAAGAACCTGAGGCTTCTGTTTTTCTACCATCTTCATCGGACACCAGATTAGGTGAGAACTCCCTCTTTCTGTTAGTGTAAATATTTATGTATTTTAAATTTTTTTAATCCCAAAAAACCTCCATTTTGAATCTGTTTTACTTCACATGTTAGTATCATTAGTCTCTTCGTTGGAGTTACTCTCTCTCTCTCTCTCTTCTTTTTGTCATACCTGGCTGATACTTAAACCTGTACCAGTTCTGCTCTCCATTCTAGCTTCATTTTCAAAGTTCCTATATTGTAGATAGGTAGATGGTGTGTACTGGTTTAGTTTCACTTTCAATACTATTGACGTTATGCCTAGACCTCCAGTCTAGCTTCTCCATTCCCAGTGATTCTGATTCTGTCTGTTCTCACATGCCGACATTAGTCTATTAGTGTGTTCTATAACTTTTAATGTACTCCTTCCATAATCACTGTCGCTTGCCGATTCTTCAATTACAAGCTTTAAAATTTTATTTTTTAGTTCTGCCTTGTGAGCAACATTTTACTTTTTTAGTTCTCTGTGGTCATAACATTTTATTAGTGAGCTGTTGTGTGCTAATACTACAATTAACCAATTAGAATAGAAACGAACAATATTGATACTCCACCCATCTCAATTCTAAGTCAAATGTCTTCTCGATGTATGTTCACACATCATATTCTAGTGGCATGGTCCTTACTGTGCTAGTAGATTCACCATTCATTTTAATTTCAAGTCATCTTACCCTGATAAAACTGTTCTATTTTTTATGCCCTTGAAGTTGGAAAGATTTCCCGGCGGATTTCTCTTGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCATCCCTTTGAAATCACTGTACCAAAAATCTTCTGGAATTTCATTGACCAATTCCCGTCAAACTACGACATCCAGAGGCCCACACTCGAGCAGTAGAAGAACAACCTCTTCAAGAAGTAGCAAACCTAGAAGTTCAGTATCTGAATTCACAGAACCATCAAAGACTTCAAGTGTTAAACAGGAACTGGAATCTACCGAGTCCAGAGATCATAAAAGAAAAGATTCATCAAAAAGAAAACGCTTGCATGAACCTAGTAGATCAATTGATCACTCAACTCGAGATTCAGGACACGGTAATAGTGCAGTAACCTCCTCAGGGTCTGCTGAGAGATCTAGTGAAGGTAAATCAAAAAAGCAAAAGAAATGAATCAGGTTTCCACAAACTTGAAGTATTCATTAGTTTTTGACAAGTTCTATAGTTTGCCTATTCTCTTATTCTCCATTTTCCTTTGCTTAGACTAAATTCTCGAGCAATTGTTGTACGTCATAGCCCATGGAAAGTTCTTTCTCATATCAGATTTACTATAAGCTACATTGAGTACTTAATTAATTAATGTTAATTTTGAATTAATAGTAAATGTTTGTTAATTTGTA AATTGAGTTGGTAATATGACAGATTGTTCTAAGTGTTCTTTAACAGCGTAGTTATTTTAACCTTAGAAAAGAAAGAAGAAAAGGAGGAGTAAGCCCTAAGCCCTTTATTCTTCCCGCCAGCACTTCCCTTCTCCAGCTGCCGAGTGTCGCCGCCGAACCGCCGCTCCATCTCTCTGGTTCAGTGCTTCCACTGCTGTGTTTCATCCTCTCCTCCCGCTGGAGCCTCCTTCTATTCCTTTGTTTCTGCTGCTATTCTCATATTGAAATACTTCGGACTTAATTAGCTTTGAGTATGAGTAGCGAGGTAGATGCTCTTAAAAATGTAGAAGGCTACAAACCTCCAGCAGAGTTTGAGGAAGACAAAAGGGAATTTCTTACTGATATTTCTTTGACTGACTCTGAAGAGTTGTGGCTTATTCAATGGCCTGCTAACCAAGCCCCAGATTTTGATGGGCAAGAATTTTCTCTTCAACTTTACCCAGATGGACATATGGGCAGCTTTCAGGGTTCATCAGGAAAATCATATGATGTGATCAGCTGTGTGGCTCAAGAACCTGAGGCTTCTGTTTTTCTACCATCTTCATCGGACACCAGATTAGTTGGAAAGATTTCCCGGCGGATTTCTCTTGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCATCCCTTTGAAATCACTGTACCAAAAATCTTCTGGAATTTCATTGACCAATTCCCGTCAAACTACGACATCCAGAGGCCCACACTCGAGCAGTAGAAGAACAACCTCTTCAAGAAGTAGCAAACCTAGAAGTTCAGTATCTGAATTCACAGAACCATCAAAGACTTCAAGTGTTAAACAGGAACTGGAATCTACCGAGTCCAGAGATCATAAAAGAAAAGATTCATCAAAAAGAAAACGCTTGCATGAACCTAGTAGATCAATTGATCACTCAACTCGAGATTCAGGACACGGTAATAGTGCAGTAACCTCCTCAGGGTCTGCTGAGAGATCTAGTGAAGGTAAATCAAAAAAGCAAAAGAAATGAATCAGGTTTCCACAAACTTGAAGTATTCATTAGTTTTTGACAAGTTCTATAGTTTGCCTATTCTCTTATTCTCCATTTTCCTTTGCTTAGACTAAATTCTCGAGCAATTGTTGTACGTCATAGCCCATGGAAAGTTCTTTCTCATATCAGATTTACTATAAGCTACATTGAGTACTTAATTAATTAATGTTAATTTTGAATTAATAGTAAATGTTTGTTAATTTGTA ATGAGTAGCGAGGTAGATGCTCTTAAAAATGTAGAAGGCTACAAACCTCCAGCAGAGTTTGAGGAAGACAAAAGGGAATTTCTTACTGATATTTCTTTGACTGACTCTGAAGAGTTGTGGCTTATTCAATGGCCTGCTAACCAAGCCCCAGATTTTGATGGGCAAGAATTTTCTCTTCAACTTTACCCAGATGGACATATGGGCAGCTTTCAGGGTTCATCAGGAAAATCATATGATGTGATCAGCTGTGTGGCTCAAGAACCTGAGGCTTCTGTTTTTCTACCATCTTCATCGGACACCAGATTAGTTGGAAAGATTTCCCGGCGGATTTCTCTTGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCATCCCTTTGAAATCACTGTACCAAAAATCTTCTGGAATTTCATTGACCAATTCCCGTCAAACTACGACATCCAGAGGCCCACACTCGAGCAGTAGAAGAACAACCTCTTCAAGAAGTAGCAAACCTAGAAGTTCAGTATCTGAATTCACAGAACCATCAAAGACTTCAAGTGTTAAACAGGAACTGGAATCTACCGAGTCCAGAGATCATAAAAGAAAAGATTCATCAAAAAGAAAACGCTTGCATGAACCTAGTAGATCAATTGATCACTCAACTCGAGATTCAGGACACGGTAATAGTGCAGTAACCTCCTCAGGGTCTGCTGAGAGATCTAGTGAAGGTAAATCAAAAAAGCAAAAGAAATGA MSSEVDALKNVEGYKPPAEFEEDKREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQLYPDGHMGSFQGSSGKSYDVISCVAQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEELEKATIPLKSLYQKSSGISLTNSRQTTTSRGPHSSSRRTTSSRSSKPRSSVSEFTEPSKTSSVKQELESTESRDHKRKDSSKRKRLHEPSRSIDHSTRDSGHGNSAVTSSGSAERSSEGKSKKQKK* Homology
BLAST of CSPI04G23220 vs. ExPASy Swiss-Prot
Match: F4KF27 (Mediator-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g64680 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.3e-13 Identity = 78/241 (32.37%), Postives = 118/241 (48.96%), Query Frame = 0
BLAST of CSPI04G23220 vs. ExPASy TrEMBL
Match: A0A0A0L047 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629490 PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 1.4e-123 Identity = 245/246 (99.59%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of CSPI04G23220 vs. ExPASy TrEMBL
Match: A0A5A7VNG7 (Mediator-associated protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001600 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 2.6e-114 Identity = 231/246 (93.90%), Postives = 237/246 (96.34%), Query Frame = 0
BLAST of CSPI04G23220 vs. ExPASy TrEMBL
Match: A0A1S3CLF4 (mediator-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103501782 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 2.6e-114 Identity = 231/246 (93.90%), Postives = 237/246 (96.34%), Query Frame = 0
BLAST of CSPI04G23220 vs. ExPASy TrEMBL
Match: A0A6J1J1C8 (LOW QUALITY PROTEIN: mediator-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480436 PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 8.5e-89 Identity = 191/248 (77.02%), Postives = 218/248 (87.90%), Query Frame = 0
BLAST of CSPI04G23220 vs. ExPASy TrEMBL
Match: A0A6J1CDR9 (mediator-associated protein 2 OS=Momordica charantia OX=3673 GN=LOC111010319 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 3.1e-83 Identity = 180/243 (74.07%), Postives = 204/243 (83.95%), Query Frame = 0
BLAST of CSPI04G23220 vs. NCBI nr
Match: XP_004146046.1 (mediator-associated protein 2 [Cucumis sativus] >XP_031740697.1 mediator-associated protein 2 [Cucumis sativus] >KGN55103.1 hypothetical protein Csa_012926 [Cucumis sativus]) HSP 1 Score: 452.2 bits (1162), Expect = 2.9e-123 Identity = 245/246 (99.59%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of CSPI04G23220 vs. NCBI nr
Match: XP_008463699.1 (PREDICTED: mediator-associated protein 2 [Cucumis melo] >KAA0066809.1 mediator-associated protein 2 [Cucumis melo var. makuwa] >TYK27956.1 mediator-associated protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 421.4 bits (1082), Expect = 5.4e-114 Identity = 231/246 (93.90%), Postives = 237/246 (96.34%), Query Frame = 0
BLAST of CSPI04G23220 vs. NCBI nr
Match: XP_038896123.1 (mediator-associated protein 2 [Benincasa hispida]) HSP 1 Score: 387.9 bits (995), Expect = 6.6e-104 Identity = 214/246 (86.99%), Postives = 228/246 (92.68%), Query Frame = 0
BLAST of CSPI04G23220 vs. NCBI nr
Match: XP_022981239.1 (LOW QUALITY PROTEIN: mediator-associated protein 2-like [Cucurbita maxima]) HSP 1 Score: 336.7 bits (862), Expect = 1.7e-88 Identity = 191/248 (77.02%), Postives = 218/248 (87.90%), Query Frame = 0
BLAST of CSPI04G23220 vs. NCBI nr
Match: XP_022139366.1 (mediator-associated protein 2 [Momordica charantia] >XP_022139367.1 mediator-associated protein 2 [Momordica charantia]) HSP 1 Score: 318.2 bits (814), Expect = 6.4e-83 Identity = 180/243 (74.07%), Postives = 204/243 (83.95%), Query Frame = 0
BLAST of CSPI04G23220 vs. TAIR 10
Match: AT5G64680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 114 Blast hits to 110 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). ) HSP 1 Score: 84.0 bits (206), Expect = 1.9e-16 Identity = 78/233 (33.48%), Postives = 118/233 (50.64%), Query Frame = 0
BLAST of CSPI04G23220 vs. TAIR 10
Match: AT5G64680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 84.0 bits (206), Expect = 1.9e-16 Identity = 78/233 (33.48%), Postives = 118/233 (50.64%), Query Frame = 0
BLAST of CSPI04G23220 vs. TAIR 10
Match: AT5G64680.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 20 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 76.6 bits (187), Expect = 3.0e-14 Identity = 78/241 (32.37%), Postives = 118/241 (48.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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