CSPI04G22680 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCGCTTCAGACCTCTTCACTCTCAAATCCAACTCTTCAATTCACAATCCACAATTTCCCTTCAATTTCACCTTCTTCCTTTTACTTCTCGATCTTTCTCACTGAATATTGGAGAGCGGATCGCACCAGAAATTGTCCCCGGTAACAGGAATACACCGCCGCCGTTTCTGTGTAGGGAAGCCGCGAATTCGGACGGAAGTGTAAAATCTCAAGAAGGGAAAGGTAGGAATGAAGAGACTGTGCTGAAAGGAAAAGTGGGTTCTGAAGGAAACAAGAAATTGACGAGGGAGGATGCTTTGCTCCGCAAACAGCTTTCTCCGGATATGGAGATGTTTGTGAGACATTTGTACCAGGAAGGCTATTTTAACTATGCTAATTTCTTGCCCGATAACAAATTTGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTCAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAGTAAGAAGAGTTTTGATTTTAGATTTTTAAATGTGGTATCTCTTTTGCGTTTTCGTTTTTATGTAATTTTTTGAGAATTGGTGTGAGATCATCATGTCTGATGAAGTGGATAGCTTTAATCTTTTGCTAATGACGATTTCATTTATAGAGTATGAAGTGCTGTGAGATTTGGATATATTGTGTGTGGAAGAATGGAACAAGGAAAATTATTTTTGTTTTTTACTTTGAATCAGTTCCATGATTTGGCTTGTGTATTGACATGGGGAAACTATACTTAATTCTAGTATTGAGGTTTTTCAAAACATGCTCTATGCATTTTGCGGTGGTAATTAAGACAAAGAAGAAATTGAGGTCATTTTCTGTTGGGGTTAGATTACTCTAACTAACTACATTTAGTATCATAAATGTAAAAATGATAGTTTGGATCATTTTTAGATGCATTAATTTTTTTAATAGGAGTTTTCATTTTCGAAGCATTAGTTTCATATTATGGGTATGAAAGCTATGAAAAGATATTCTTTTTCACTTTTGAAAGGACTATGGTCAAAGTTGGAAGTTTGATTTTCCATAACTCAAATATTAGAATATCTGCTGCTATTATTCCCTAACAAGTTGTTTTTGCTTGGCTCGATTGGTTCATCTTTCAAAAGTAATTGTACAGGTCGGTTTTGTGTTGATATTCAACTTAGTGAGCAATTTTAATGGTTCCATCTCCCACCCCTATCATTGTTGAACTAAAAAAGATATCCATTTACCAACCCATATTGTTTAATTAGTTTTAGCATTAGTAACCCTTGACTAAATAGTTATCCATCTAAGACATAACTGACCTAAACCGACCTATCTTGGTCTTCAATTTACTCTTTCCTAGCTAATCTCTCTGCTTTTCATTTTTCTATCTGCTGCTTGATAATTGCTTGAATCCTTCTGGGACTGATAATTTCAAGATTGTACAAGACATTAATGTGTCAGATTTAAGTGTAGTGAACATAAAAGTGTAATATTCCTAATAAGTTACAAAATCTAACATTCTGATTCCAAAAGAAATAATTTTTTGTACTTCATCTTTGTGGTTGTGGCAGTTGTGTTTCTTTATGAAGACATCCCCCTATTGTTTCACGTCTTGAATTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGATGTCCATCCACTGCAAGAAAAGATGTTTTTGCGGCTAAAAGATTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTAAGAAAAACCAATATTACCTTGTTCCTTCCATTACCAACTAATTTTTAGTAGAATTCTTTGGCTTATTTTCTTCCTCTTCAAATTATCTGCAGGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTATGTCAATCAAGGTGTTTGGAATGAGGACACCAAGAATTTGAATTTAGGGGTTGTTTTGCAAGTTACTACTCAATACGCCTTGGAAGCTATACCAGAACAACTTATAATACCTGAAGATATAAAGGCTTCCGTAAGTCGATTGCTGAAAGAGATATTAAACCTAAGTCCGACCGTGTCAAGGAACTAA ATGTCTCGCTTCAGACCTCTTCACTCTCAAATCCAACTCTTCAATTCACAATCCACAATTTCCCTTCAATTTCACCTTCTTCCTTTTACTTCTCGATCTTTCTCACTGAATATTGGAGAGCGGATCGCACCAGAAATTGTCCCCGGTAACAGGAATACACCGCCGCCGTTTCTGTGTAGGGAAGCCGCGAATTCGGACGGAAGTGTAAAATCTCAAGAAGGGAAAGGTAGGAATGAAGAGACTGTGCTGAAAGGAAAAGTGGGTTCTGAAGGAAACAAGAAATTGACGAGGGAGGATGCTTTGCTCCGCAAACAGCTTTCTCCGGATATGGAGATGTTTGTGAGACATTTGTACCAGGAAGGCTATTTTAACTATGCTAATTTCTTGCCCGATAACAAATTTGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTCAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGATGTCCATCCACTGCAAGAAAAGATGTTTTTGCGGCTAAAAGATTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTATGTCAATCAAGGTGTTTGGAATGAGGACACCAAGAATTTGAATTTAGGGGTTGTTTTGCAAGTTACTACTCAATACGCCTTGGAAGCTATACCAGAACAACTTATAATACCTGAAGATATAAAGGCTTCCGTAAGTCGATTGCTGAAAGAGATATTAAACCTAAGTCCGACCGTGTCAAGGAACTAA ATGTCTCGCTTCAGACCTCTTCACTCTCAAATCCAACTCTTCAATTCACAATCCACAATTTCCCTTCAATTTCACCTTCTTCCTTTTACTTCTCGATCTTTCTCACTGAATATTGGAGAGCGGATCGCACCAGAAATTGTCCCCGGTAACAGGAATACACCGCCGCCGTTTCTGTGTAGGGAAGCCGCGAATTCGGACGGAAGTGTAAAATCTCAAGAAGGGAAAGGTAGGAATGAAGAGACTGTGCTGAAAGGAAAAGTGGGTTCTGAAGGAAACAAGAAATTGACGAGGGAGGATGCTTTGCTCCGCAAACAGCTTTCTCCGGATATGGAGATGTTTGTGAGACATTTGTACCAGGAAGGCTATTTTAACTATGCTAATTTCTTGCCCGATAACAAATTTGTTCTTAGTTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTCAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCCTTCTTTGGATGTCCATCCACTGCAAGAAAAGATGTTTTTGCGGCTAAAAGATTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTCTGTCACAAATGCATCTTGAGACAATCATGCAAGTATGTCAATCAAGGTGTTTGGAATGAGGACACCAAGAATTTGAATTTAGGGGTTGTTTTGCAAGTTACTACTCAATACGCCTTGGAAGCTATACCAGAACAACTTATAATACCTGAAGATATAAAGGCTTCCGTAAGTCGATTGCTGAAAGAGATATTAAACCTAAGTCCGACCGTGTCAAGGAACTAA MSRFRPLHSQIQLFNSQSTISLQFHLLPFTSRSFSLNIGERIAPEIVPGNRNTPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQYALEAIPEQLIIPEDIKASVSRLLKEILNLSPTVSRN* Homology
BLAST of CSPI04G22680 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1) HSP 1 Score: 551.6 bits (1420), Expect = 1.9e-153 Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0
BLAST of CSPI04G22680 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 2.1e-136 Identity = 252/277 (90.97%), Postives = 257/277 (92.78%), Query Frame = 0
BLAST of CSPI04G22680 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.3e-106 Identity = 211/286 (73.78%), Postives = 229/286 (80.07%), Query Frame = 0
BLAST of CSPI04G22680 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 2.1e-104 Identity = 207/286 (72.38%), Postives = 227/286 (79.37%), Query Frame = 0
BLAST of CSPI04G22680 vs. ExPASy TrEMBL
Match: A0A1S3CK23 (uncharacterized protein LOC103501830 OS=Cucumis melo OX=3656 GN=LOC103501830 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 9.0e-71 Identity = 142/167 (85.03%), Postives = 148/167 (88.62%), Query Frame = 0
BLAST of CSPI04G22680 vs. NCBI nr
Match: XP_004146085.1 (uncharacterized protein LOC101222492 [Cucumis sativus] >KGN55046.1 hypothetical protein Csa_012594 [Cucumis sativus]) HSP 1 Score: 551.6 bits (1420), Expect = 3.9e-153 Identity = 275/277 (99.28%), Postives = 276/277 (99.64%), Query Frame = 0
BLAST of CSPI04G22680 vs. NCBI nr
Match: KAA0066744.1 (uncharacterized protein E6C27_scaffold271G00820 [Cucumis melo var. makuwa] >TYK27892.1 uncharacterized protein E5676_scaffold384G00760 [Cucumis melo var. makuwa]) HSP 1 Score: 495.0 bits (1273), Expect = 4.3e-136 Identity = 252/277 (90.97%), Postives = 257/277 (92.78%), Query Frame = 0
BLAST of CSPI04G22680 vs. NCBI nr
Match: XP_038898284.1 (uncharacterized protein LOC120085986 [Benincasa hispida]) HSP 1 Score: 464.9 bits (1195), Expect = 4.8e-127 Identity = 235/285 (82.46%), Postives = 257/285 (90.18%), Query Frame = 0
BLAST of CSPI04G22680 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 399.1 bits (1024), Expect = 3.2e-107 Identity = 212/286 (74.13%), Postives = 229/286 (80.07%), Query Frame = 0
BLAST of CSPI04G22680 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 399.1 bits (1024), Expect = 3.2e-107 Identity = 212/286 (74.13%), Postives = 229/286 (80.07%), Query Frame = 0
BLAST of CSPI04G22680 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). ) HSP 1 Score: 186.8 bits (473), Expect = 2.3e-47 Identity = 96/208 (46.15%), Postives = 135/208 (64.90%), Query Frame = 0
BLAST of CSPI04G22680 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 66.6 bits (161), Expect = 3.5e-11 Identity = 41/130 (31.54%), Postives = 70/130 (53.85%), Query Frame = 0
BLAST of CSPI04G22680 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 7.4e-09 Identity = 49/162 (30.25%), Postives = 81/162 (50.00%), Query Frame = 0
BLAST of CSPI04G22680 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 7.4e-09 Identity = 49/162 (30.25%), Postives = 81/162 (50.00%), Query Frame = 0
BLAST of CSPI04G22680 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 58.2 bits (139), Expect = 1.3e-08 Identity = 35/107 (32.71%), Postives = 51/107 (47.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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