CSPI04G21650 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G21650
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description40S ribosomal protein S15a
LocationChr4: 20118094 .. 20121950 (-)
RNA-Seq ExpressionCSPI04G21650
SyntenyCSPI04G21650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGTTAAAGGTGGATGGTCGGAGTATATGCCTCTAGAGTTCGTCATCAAAGGTGGTAACAAGAACTCAATTTTGGTCATGAAGGTGTGACAACGATAATCGTGTATAGCAATCATTAGGTAGAGCCACTGAAAATATCGAAGAGATGGAAAAGCAATGTTTCATGGAAAAAATCGTTATCAATTAACTTTTTAGAAAACTTTATGGAAATTGATGGAAATTGTTACAATTAGTTTACGAAACTTTGACTGTGACATAATTGTACTACGTTTAATTATCGTTTCATAAAGTAAAACAACTAATGTTAAATTTCATGAAGATATTGATGTGAGAGCATGGTTTCTAAGTAAAACTATCACATTAATTCAATTTGAAAAACTAGTCTAATTCAAAGTCTTGATGATTCTCGGTTTTGGTTTTTATTGAAAATGAAATTTTTGGGTGGTTAGAGAAGCAACAATCACATTGATTCAATTTGACCATGATGTGAAAAATTAATCAAAAAAATGTTTCGAAAAGAGTTTTAAACTATGTTCTCGATTTTTGGTTTCATAAACATGAATGTCGTAGATGGTAAAAAAGGCAACTAAGGGAGCACTCATATATTCTCCTAAAGTCGGGAAAGGAGAGAATTCCGTATGGTACAATTATGTTCCCAACTCCATACTTAACATTTTCTCCAAAATGGTAGGTTTATCGAGTCGACAATATGGTCACTCTCACTTGTACAAATCAAATGATAACTCCTCGCACGAACAAGAGTTCATATTACACTTGAAAATAAAACTAAGTTGCTTAAATCATTATATTGAAATAGAAACATAACTAGTCAATGAACCTACATCTAGTAATTACTATTTTGTGGTTTAGTCTAATGCAAACTCATTACATAGAATATCCCACTCATGTGTTACGCGAACATGTTAGATCATTGCATATGTATCAAACACAAAGTAAGTTGTATTGATGTTATCAAGATAAGGTACCATACCTTATACTATAAATGATATAAGTTGTACCTTGAACATTGATCAATGTATATATCCACAAACACTTCAATATTCACAAGGCAGCTTGGGATGGTACTTTACTAGATTTAAGTTATCAAGGACAAAACTAATAAAATAATCAACAACACTTATTTAAACTGCAATAATAATACTTTATTAACACAACGTTAAATTAACTATATTTATCATCTACTTGTGTTAGGACATAAAACTCAACAACCCAACTTGTGTTGGAGAGCCAAGCACCCTTAAAATCACAATATTTATTCGACGATGTCACAAATTACAAGTCTATGTTTGATATTTGTTTTCAAAAAGCAATAAGCACAAGAGCAAGAGAGCAAAGAGGGTTGCACGTTAGCTCAAGAAAACAAAAACGGAAGAATTCTAACTCGTGAACAGTGTTGATTCAAATGGACCAACCAAAAAATTGTATTGTGAAAAAAAAATAGTCAAAACACCTACTAGACAAAAGAGATTGAAAATCGTTACGGTGTCAAGACACACACTCTTACACTCAAGCCAATCTCAAGTTTGCAACTAACTTGACAATAAAATATAAGAGAGTAGATAACTTTTGTCGTTTGTATAAGTCAATATAATTGATGCTTTGACTCATTACAACTCCGACTACTTATATTATTTATTGGGTGATTATGGTATCCAGTTGATGTTGTCACAAATGCTAATAAAACTAAAGTTACCCCAAAGTTTTTTTTTTTTTTTTGAAAAGGTTTTGTAATTAAATTCAACAATGAGAAGATTTGAACTCGAAACCTTATGTCCATGTGTACATACAGATGCACTAAGTTCGTATTGATAGTTATCCAAAGTTACCCGATGCATAATTTTTAAGAAAACTAATGAGATTAAACGTCCATTTGGATTCATTTAAGAAAAATGTATTTTAAGAAACTATTTTTTATAAAAAGTTTGTTTAAAACACACTTACAAAAATATATTTTTAATGGCTTATAAACATTTTAATTTATTTTTTAAATTAAGGATAAATACTCAAAAACAATTTAAGTTTGTGGGTTAAAGAAAATCCCAAAATCACGTTGTCCAAATTCCCCAATTTGGGCCTAAATCCGAAGCCCTATAGTTTACAACCCAGCCCTATTTTAAACGGCACTATAAATAAATTAGGTTTCATCTTCTCTCTTCTCTCTTTTCACTCAGCCGTTGAAGAAGCAGAAGCCCTAATTCCCATTCGAACTCTGCAATTTTCGTCTTCTGGCCTCCCTTCTCTCTCGGGTTTGTTTTGAATTTCTTTCTTTTCATTCTTTATTTACTTCTTCTAGTCGATGATTTAAGCGTACAAGTCAAATTTATACACTGCTTATAGATAAATTGGATTTTTTTTCTAGAAAGGATTGACTGTATGATTTGTTAATTAATTTCATAGGTTGTTTTTTTTTTATTTAATGATTCATATTAGAAGTAGGGTTTTATCATTTGAGAAGATATACACATTTTTAGTTGTTCGTTTAATTTTGCGGCGTTCTTAACTTGAACTTTGGGGATTTATGTATTTGCAGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGTATACGTTGTTTAGCAATTTCATTTCCATCTCATTCGTTGCAACACCTTAAACCTGTTTAATTTTGGTTCTGTTAAAAATTTCATTGTTTTAGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAGCTGAATGGGAGACTTAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTAATTGTATTATGCTTAAGACTTGTTTGTATTTTACTCGAATCCGAACTTTTTATAACAAACGACATCCGCATGATTGCAGTTTGGATTCATCGTCTTGACTACATCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAACGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAAGTAATGTTGTGAGATTGGTTTTTCTTCTTTTTGGTATTTTCTGCACTTTTGAACTTAGATGGGGAAGCAGTAGAGAGTCCTGTTTTGTTTTTAGTTGCTGTTTTGGTTGGTGGGGAGGATACAGGAGATTTGGCCTGCATTCTTTTTGGAGACTTTCATGAGCCATTTTTCTTAATCTATGAGTTTTATTTGTTTGCTATACTAAAACTGGAATTGCCATAGTTTTCAAGCTTTGGAATTCATTGCAATTTTCTCAGACAGCAATTATGTTCCCTCACCCACCCATCAATTTGTGTGTTCTATATCATATTTATGTATGATTCCTTCTCCATCTTTTGATGATTCTTTTCAATTCTTCTATCTTACAATTACATGATCCTTTTGGGCAACTTTAATAGATAATTCTAGAAGTGAAAATTGGAGACTTAGTTTTGGTAGAATGAACCACCATGGTTTTTGATCACTGTTCCAAATGATTTGTTCAGTCTAGACAACTATATGTGCTATGGTTGAGATATGAATGGCGAGCTTTGCGTGTATAGGATTTCTTCTAACTTGGGTTTGAACAATGCTCAATTTAGAATTCTTTGTATAGTTACCTTTTCTTAGTTCAATAATTGTGCAGAGGGATTTGAATTTCACACCTCCTTGCAACACAAGATCTGTAATTTGCATTTCCAATTACATACTTCAAATCCAGAAATTGAGACACAGCT

mRNA sequence

ATGGTCGTTAAAGGTGGATGGTCGGAGTATATGCCTCTAGAGTTCGTCATCAAAGGTGCCGTTGAAGAAGCAGAAGCCCTAATTCCCATTCGAACTCTGCAATTTTCGTCTTCTGGCCTCCCTTCTCTCTCGGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAGCTGAATGGGAGACTTAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGTTTGGATTCATCGTCTTGACTACATCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAACGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAAGTAATGTTGTGAGATTGGTTTTTCTTCTTTTTGGTATTTTCTGCACTTTTGAACTTAGATGGGGAAGCAGTAGAGAGTCCTGTTTTGTTTTTAGTTGCTGTTTTGGTTGGTGGGGAGGATACAGGAGATTTGGCCTGCATTCTTTTTGGAGACTTTCATGAGCCATTTTTCTTAATCTATGAGTTTTATTTGTTTGCTATACTAAAACTGGAATTGCCATAGTTTTCAAGCTTTGGAATTCATTGCAATTTTCTCAGACAGCAATTATGTTCCCTCACCCACCCATCAATTTGTGTGTTCTATATCATATTTATGTATGATTCCTTCTCCATCTTTTGATGATTCTTTTCAATTCTTCTATCTTACAATTACATGATCCTTTTGGGCAACTTTAATAGATAATTCTAGAAGTGAAAATTGGAGACTTAGTTTTGGTAGAATGAACCACCATGGTTTTTGATCACTGTTCCAAATGATTTGTTCAGTCTAGACAACTATATGTGCTATGGTTGAGATATGAATGGCGAGCTTTGCGTGTATAGGATTTCTTCTAACTTGGGTTTGAACAATGCTCAATTTAGAATTCTTTGTATAGTTACCTTTTCTTAGTTCAATAATTGTGCAGAGGGATTTGAATTTCACACCTCCTTGCAACACAAGATCTGTAATTTGCATTTCCAATTACATACTTCAAATCCAGAAATTGAGACACAGCT

Coding sequence (CDS)

ATGGTCGTTAAAGGTGGATGGTCGGAGTATATGCCTCTAGAGTTCGTCATCAAAGGTGCCGTTGAAGAAGCAGAAGCCCTAATTCCCATTCGAACTCTGCAATTTTCGTCTTCTGGCCTCCCTTCTCTCTCGGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAGCTGAATGGGAGACTTAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGTTTGGATTCATCGTCTTGACTACATCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAACGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAA

Protein sequence

MVVKGGWSEYMPLEFVIKGAVEEAEALIPIRTLQFSSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY*
Homology
[Close]
BLAST of CSPI04G21650 vs. ExPASy Swiss-Prot
Match: P42798 (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 262.7 bits (670), Expect = 3.0e-69
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. ExPASy Swiss-Prot
Match: Q9LX88 (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 262.3 bits (669), Expect = 3.9e-69
Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. ExPASy Swiss-Prot
Match: Q00332 (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 261.2 bits (666), Expect = 8.8e-69
Identity = 125/130 (96.15%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. ExPASy Swiss-Prot
Match: Q9AT34 (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 258.1 bits (658), Expect = 7.4e-68
Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. ExPASy Swiss-Prot
Match: O80646 (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 245.0 bits (624), Expect = 6.5e-64
Identity = 117/130 (90.00%), Postives = 124/130 (95.38%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDHRSGK
Sbjct: 1   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHEEAR+KN
Sbjct: 61  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. ExPASy TrEMBL
Match: A0A0A0KZP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608140 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.4e-82
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 20  AVEEAEALIPIRTLQFSSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKV 79
           AVEEAEALIPIRTLQFSSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKV
Sbjct: 58  AVEEAEALIPIRTLQFSSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKV 117

Query: 80  IIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARL 139
           IIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARL
Sbjct: 118 IIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARL 177

Query: 140 LPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 177
           LPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 178 LPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 214

[Close]
BLAST of CSPI04G21650 vs. ExPASy TrEMBL
Match: A0A5D2E487 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A13G265900v1 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.6e-68
Identity = 140/190 (73.68%), Postives = 152/190 (80.00%), Query Frame = 0 

Query: 1   MVVKGGWSEYMPLEFVIKGAVEEAEALIPIRTLQFSSSGLPSLSVI-------------- 60
           ++V+  W+E +P    I G    ++A  P   + +   GLPS   +              
Sbjct: 47  LIVEQRWNEIIPFIAQIVG----SDADCPYSLIYYFLVGLPSAKPLSCRHFCFQQLAFEK 106

Query: 61  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 120
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 107 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 166

Query: 121 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 177
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 167 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 226

[Close]
BLAST of CSPI04G21650 vs. ExPASy TrEMBL
Match: K3XLU5 (30S ribosomal protein S8, chloroplastic OS=Setaria italica OX=4555 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.7e-68
Identity = 130/142 (91.55%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 35  FSSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIG 94
           F+    P+  VIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIG
Sbjct: 76  FAGDEHPAGKVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIG 135

Query: 95  EFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSA 154
           EFE+VDDHR+GKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSA
Sbjct: 136 EFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSA 195

Query: 155 GIMDHEEARRKNVGGKVLGFFY 177
           GIMDHEEARRKNVGGKVLGFFY
Sbjct: 196 GIMDHEEARRKNVGGKVLGFFY 217

[Close]
BLAST of CSPI04G21650 vs. ExPASy TrEMBL
Match: A0A1S3CPB7 (40S ribosomal protein S15a-1 OS=Cucumis melo OX=3656 GN=LOC103503055 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.0e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. ExPASy TrEMBL
Match: A0A5A7SSH5 (40S ribosomal protein S15a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00840 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.0e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. NCBI nr
Match: TYG88070.1 (hypothetical protein ES288_A13G265900v1 [Gossypium darwinii])

HSP 1 Score: 268.1 bits (684), Expect = 5.5e-68
Identity = 140/190 (73.68%), Postives = 152/190 (80.00%), Query Frame = 0 

Query: 1   MVVKGGWSEYMPLEFVIKGAVEEAEALIPIRTLQFSSSGLPSLSVI-------------- 60
           ++V+  W+E +P    I G    ++A  P   + +   GLPS   +              
Sbjct: 47  LIVEQRWNEIIPFIAQIVG----SDADCPYSLIYYFLVGLPSAKPLSCRHFCFQQLAFEK 106

Query: 61  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 120
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 107 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 166

Query: 121 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 177
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 167 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 226

[Close]
BLAST of CSPI04G21650 vs. NCBI nr
Match: KAF7133456.1 (hypothetical protein RHSIM_Rhsim09G0164200 [Rhododendron simsii])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 133/144 (92.36%), Postives = 136/144 (94.44%), Query Frame = 0 

Query: 33  LQFSSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGY 92
           LQF+     +L   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGY
Sbjct: 6   LQFTGLVGGALRAKMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGY 65

Query: 93  IGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTT 152
           IGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTT
Sbjct: 66  IGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTT 125

Query: 153 SAGIMDHEEARRKNVGGKVLGFFY 177
           SAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 126 SAGIMDHEEARRKNVGGKVLGFFY 149

[Close]
BLAST of CSPI04G21650 vs. NCBI nr
Match: KAF7148267.1 (hypothetical protein RHSIM_Rhsim03G0129000 [Rhododendron simsii])

HSP 1 Score: 266.2 bits (679), Expect = 2.1e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 22  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 81

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 82  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 141

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 142 VGGKVLGFFY 151

[Close]
BLAST of CSPI04G21650 vs. NCBI nr
Match: KAG5557696.1 (hypothetical protein RHGRI_007820 [Rhododendron griersonianum])

HSP 1 Score: 266.2 bits (679), Expect = 2.1e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 18  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 77

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 78  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 137

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 138 VGGKVLGFFY 147

[Close]
BLAST of CSPI04G21650 vs. NCBI nr
Match: XP_004144630.1 (40S ribosomal protein S15a-1 [Cucumis sativus] >XP_008457542.1 PREDICTED: 40S ribosomal protein S15a-1 [Cucumis melo] >XP_008465450.1 PREDICTED: 40S ribosomal protein S15a-1 [Cucumis melo] >XP_011657911.1 40S ribosomal protein S15a-1 [Cucumis sativus] >XP_038893650.1 40S ribosomal protein S15a-1 [Benincasa hispida] >XP_038897125.1 40S ribosomal protein S15a-1 [Benincasa hispida] >KAA0033910.1 40S ribosomal protein S15a-1 [Cucumis melo var. makuwa] >BAA89231.1 wrp15a [Citrullus lanatus] >KAA0052378.1 40S ribosomal protein S15a-1 [Cucumis melo var. makuwa] >KAE8649788.1 hypothetical protein Csa_011988 [Cucumis sativus] >KAE8653230.1 hypothetical protein Csa_019672 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 2.1e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. TAIR 10
Match: AT1G07770.1 (ribosomal protein S15A )

HSP 1 Score: 262.7 bits (670), Expect = 2.1e-70
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. TAIR 10
Match: AT1G07770.2 (ribosomal protein S15A )

HSP 1 Score: 262.7 bits (670), Expect = 2.1e-70
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. TAIR 10
Match: AT5G59850.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 262.7 bits (670), Expect = 2.1e-70
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. TAIR 10
Match: AT3G46040.1 (ribosomal protein S15A D )

HSP 1 Score: 262.3 bits (669), Expect = 2.8e-70
Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 47  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 106
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 107 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 166
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 167 VGGKVLGFFY 177
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of CSPI04G21650 vs. TAIR 10
Match: AT2G39590.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 246.1 bits (627), Expect = 2.1e-65
Identity = 118/134 (88.06%), Postives = 126/134 (94.03%), Query Frame = 0 

Query: 43  LSVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDH 102
           +  IMVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDH
Sbjct: 3   VEAIMVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDH 62

Query: 103 RSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEA 162
           RSGKIVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHEEA
Sbjct: 63  RSGKIVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEA 122

Query: 163 RRKNVGGKVLGFFY 177
           R+KNVGGKVLGFFY
Sbjct: 123 RKKNVGGKVLGFFY 136

The following BLAST results are available for this feature:
BLAST of CSPI04G21650 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P427983.0e-6996.9240S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=... [more]
Q9LX883.9e-6996.9240S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=... [more]
Q003328.8e-6996.1540S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3[more]
Q9AT347.4e-6895.3840S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3[more]
O806466.5e-6490.0040S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=... [more]
BLAST of CSPI04G21650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZP39.4e-82100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608140 PE=3 SV=1[more]
A0A5D2E4872.6e-6873.68Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A13G265900v1 PE=... [more]
K3XLU57.7e-6891.5530S ribosomal protein S8, chloroplastic OS=Setaria italica OX=4555 PE=3 SV=1[more]
A0A1S3CPB71.0e-67100.0040S ribosomal protein S15a-1 OS=Cucumis melo OX=3656 GN=LOC103503055 PE=3 SV=1[more]
A0A5A7SSH51.0e-67100.0040S ribosomal protein S15a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
BLAST of CSPI04G21650 vs. NCBI nr
Match NameE-valueIdentityDescription
TYG88070.15.5e-6873.68hypothetical protein ES288_A13G265900v1 [Gossypium darwinii][more]
KAF7133456.11.2e-6792.36hypothetical protein RHSIM_Rhsim09G0164200 [Rhododendron simsii][more]
KAF7148267.12.1e-67100.00hypothetical protein RHSIM_Rhsim03G0129000 [Rhododendron simsii][more]
KAG5557696.12.1e-67100.00hypothetical protein RHGRI_007820 [Rhododendron griersonianum][more]
XP_004144630.12.1e-67100.0040S ribosomal protein S15a-1 [Cucumis sativus] >XP_008457542.1 PREDICTED: 40S ri... [more]
BLAST of CSPI04G21650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G07770.12.1e-7096.92ribosomal protein S15A [more]
AT1G07770.22.1e-7096.92ribosomal protein S15A [more]
AT5G59850.12.1e-7096.92Ribosomal protein S8 family protein [more]
AT3G46040.12.8e-7096.92ribosomal protein S15A D [more]
AT2G39590.12.1e-6588.06Ribosomal protein S8 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000630Ribosomal protein S8PFAMPF00410Ribosomal_S8coord: 53..176
e-value: 3.1E-21
score: 75.6
IPR000630Ribosomal protein S8PANTHERPTHR1175840S RIBOSOMAL PROTEIN S15Acoord: 47..176
IPR000630Ribosomal protein S8PROSITEPS00053RIBOSOMAL_S8coord: 146..163
IPR000630Ribosomal protein S8HAMAPMF_01302_ARibosomal_S8_Acoord: 48..176
score: 32.288784
NoneNo IPR availableGENE3D3.30.1490.10coord: 116..176
e-value: 2.5E-36
score: 125.1
NoneNo IPR availableGENE3D3.30.1370.30coord: 47..115
e-value: 1.8E-35
score: 122.7
NoneNo IPR availablePANTHERPTHR11758:SF39OS02G0478600 PROTEINcoord: 47..176
IPR035987Ribosomal protein S8 superfamilySUPERFAMILY56047Ribosomal protein S8coord: 50..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G21650.1CSPI04G21650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome