CSPI04G21630 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G21630
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	60S ribosomal protein L18a
Location	Chr4: 20100682 .. 20103018 (-)
RNA-Seq Expression	CSPI04G21630
Synteny	CSPI04G21630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGATTCGTGGCAGTTTGGCTATCGGCCGTCGAGAGGTAAATCGAAGCACCGATTTCTTTCAGATCTTCGAGTTTCAAAATGGTTACATTCAGAGTAAGAATCTGCTTTATGAACGCTGAAATTTTATCTGATCGATTGTTTTGTACGTTACATTTTGAATTTTTTTTTCTTCTGATTCGAATGTACTATAGCTGTTCATTAGGTTCACTTCTTCCACTTCGAAGTGAGTTTGCAAGACATTGGTCTATTTTTTTTTTGTTCACTTTGTGTTCACTTGCTTTATCGGGATGCAGTTTCACCAGTACCAGGTTGTGGGGAGGGCTCTTCCTTCTGAATCGGATGAGCATCCCAAGATCTATCGGATGAAGCTATGGGCTACCAACGAAGTCCGTGCCAAATCTAAGTTCTGGTGTGTTGTTATCCTTTCCGTCGATGTTTCTTTATCTTTTTGATTGGTTACTTGTTAGAAAATGAAGGCGAATAAGGGTGTTTTATCCTACTCCGTTTCGAAATGAACTCTATGTTGCTTTCATGATCCTGGTTCATGTAGTTAGAAGATTTATGAGTGGATTGACATTTTCAACGTGATTCTTTCTAAAAATTCGGGAGGGATTAAAGAAATTTTTACAGCAGTTTTAATTTTTATGAATGGCTTGATCCAGCAGTTTTAATTTTTACAGCAGCACAATGAGGTTTTATTCATGGGTTTAGTTCTATTGATATAATTTGGTTTTGTATAATTATGATTATTTTGATTCTATAGTCTTAGTTCAATAGTTTAAGATTTATCCATTGTCCCTTTTGCCTTCATAGAATGTTTGACTCAACAGATGGAAACTGTTTTTTTATTGTTTTTGTTTTCTTTTTTTAATATGATAACAATAAATGTGTCAGGAACATGCTTCTATATTTGAAAAACTGTAAAAATTAGTTTTCAAATTCTAAAATTTAAATTTTGGTGAGAATTCAAATGTGGAAAGTACATTAAAGAAATTGTGTGAAGCTAGCTTAGTTTGTATCCTGATTTCTTGATACTTGCGTGGATAGGTACTTTTTGAGGAAGTTGAAGAAAGTTAAGAAAAGCAATGGTCAAATTCTTGCCATTAATGAGGTATCGTGTCTGGAACATGCTTCTACACTCTTATGCCTTTATCGTGTGACTGAGACGGTAGTTAATTGAGAGCTATTTCCAGCTTCTTTGGTTTTTAACCCAGACGTCTGGTTTCTTTTGTCTATGAAATCTTCTATTTTATTTATAGACATGATATTTGTAAGTTTTCATGCGTTGTTTGAATTTGTTTGCATATATATGCTATATGTATGTTTATGGATGTCTATTACTACATCACTACTTGTGCAAGTATTTATAGATATATTTATTTGTACGTTTGAACCTTTTTGTTCTTTGCGAATGGTTATTTGCATAAATGTTTTACTGTCTGATGGACGTTCGACAACTTTAGTGGTATAGATTTATATTTGATTGCTTTTTTTTTCTATACAGTAGTGTACTTCGTTCAAGTAATTTCATGTAAGATTCTGGCCTGCACATAAGCACACCTTTTCCTCCTTAATTCTTCCCCTCTTGCCTCAATGTTCTAAGCCATGGTACAATTAGTAATATTCTCACATTTATTTTTCAACTTGCAGATTTTTGAAAAGAACCCAACAAAGATCAAGAACTATGGTATTTGGCTGCGATATCAGAGTCGAACTGGTTATCACAACATGTACAAGGAGTACCGTGACACAACATTGAATGGTGCCGTTGAGCAAATGTATACCGAGATGGCCTCTCGCCATAGGGTAAGGTGCCCGTGCATCCAAATCATTAAGACAGCAACTGTTCCAGCGAAACTCTGCAAGAGGGAAAGTACGAAACAGTTCCACGACTCAAAGATCAAATTCCCGTTGGTGTTCAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACATACAAAGCATCTAAGCCCAACTTGTTCATGTAATTCTGTTCATCATCTTGATTATTATTGATTAGATTATTATTGATTAGATTAATAGCAACTTCGAGAAGTAGATGCAATTTATTCGAAACAATTCGTTTTTCTAGCACAATTATTCCTCTGTTATGGAGTTCATGAGATGAGTTTGCCAATTTTGATTGGATTAATATCTAAATCAAATTTTCTTGGATTTCTGTTTTTGAAGCATTTTTTTCTTGAGTTTTGCAAGTTGTAGTCTTGAATTATTGTGTTGGGTTCGAACCATTATCTAAACTCCATTTTGAATATTGTGTATTGTCAAACACATTCTATCTATCTATGAAGTTTTAATTTCTGAAGTAGTTAAG

mRNA sequence

ACGATTCGTGGCAGTTTGGCTATCGGCCGTCGAGAGGTAAATCGAAGCACCGATTTCTTTCAGATCTTCGAGTTTCAAAATGGTTACATTCAGATTTCACCAGTACCAGGTTGTGGGGAGGGCTCTTCCTTCTGAATCGGATGAGCATCCCAAGATCTATCGGATGAAGCTATGGGCTACCAACGAAGTCCGTGCCAAATCTAAGTTCTGGTACTTTTTGAGGAAGTTGAAGAAAGTTAAGAAAAGCAATGGTCAAATTCTTGCCATTAATGAGATTTTTGAAAAGAACCCAACAAAGATCAAGAACTATGGTATTTGGCTGCGATATCAGAGTCGAACTGGTTATCACAACATGTACAAGGAGTACCGTGACACAACATTGAATGGTGCCGTTGAGCAAATGTATACCGAGATGGCCTCTCGCCATAGGGTAAGGTGCCCGTGCATCCAAATCATTAAGACAGCAACTGTTCCAGCGAAACTCTGCAAGAGGGAAAGTACGAAACAGTTCCACGACTCAAAGATCAAATTCCCGTTGGTGTTCAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACATACAAAGCATCTAAGCCCAACTTGTTCATGTAATTCTGTTCATCATCTTGATTATTATTGATTAGATTATTATTGATTAGATTAATAGCAACTTCGAGAAGTAGATGCAATTTATTCGAAACAATTCGTTTTTCTAGCACAATTATTCCTCTGTTATGGAGTTCATGAGATGAGTTTGCCAATTTTGATTGGATTAATATCTAAATCAAATTTTCTTGGATTTCTGTTTTTGAAGCATTTTTTTCTTGAGTTTTGCAAGTTGTAGTCTTGAATTATTGTGTTGGGTTCGAACCATTATCTAAACTCCATTTTGAATATTGTGTATTGTCAAACACATTCTATCTATCTATGAAGTTTTAATTTCTGAAGTAGTTAAG

Coding sequence (CDS)

ATGGTTACATTCAGATTTCACCAGTACCAGGTTGTGGGGAGGGCTCTTCCTTCTGAATCGGATGAGCATCCCAAGATCTATCGGATGAAGCTATGGGCTACCAACGAAGTCCGTGCCAAATCTAAGTTCTGGTACTTTTTGAGGAAGTTGAAGAAAGTTAAGAAAAGCAATGGTCAAATTCTTGCCATTAATGAGATTTTTGAAAAGAACCCAACAAAGATCAAGAACTATGGTATTTGGCTGCGATATCAGAGTCGAACTGGTTATCACAACATGTACAAGGAGTACCGTGACACAACATTGAATGGTGCCGTTGAGCAAATGTATACCGAGATGGCCTCTCGCCATAGGGTAAGGTGCCCGTGCATCCAAATCATTAAGACAGCAACTGTTCCAGCGAAACTCTGCAAGAGGGAAAGTACGAAACAGTTCCACGACTCAAAGATCAAATTCCCGTTGGTGTTCAAGAAGGTGAGGCCACCCACCAGGAAGCTCAAGACAACATACAAAGCATCTAAGCCCAACTTGTTCATGTAA

Protein sequence

MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRCPCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM*

Homology

[Close]

BLAST of CSPI04G21630 vs. ExPASy Swiss-Prot
Match: Q9ATF5 (60S ribosomal protein L18a OS=Castanea sativa OX=21020 GN=RPL18A PE=2 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.3e-93
Identity = 164/178 (92.13%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGR LPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTAT+PAKLCKRES+KQFH+SKIKFPLV +K+RPP+RKLKT YKAS+PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. ExPASy Swiss-Prot
Match: P51418 (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=2)

HSP 1 Score: 337.8 bits (865), Expect = 7.5e-92
Identity = 163/178 (91.57%), Postives = 171/178 (96.07%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           M  FRFHQYQVVGRALP+E D  PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLVF+KVRPP+RKLKTTYKA+KPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. ExPASy Swiss-Prot
Match: Q9LUD4 (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18AC PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 4.8e-91
Identity = 161/175 (92.00%), Postives = 168/175 (96.00%), Query Frame = 0


Query: 4   FRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAI 63
           FRFHQYQVVGRALP+E+DEHPKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+LAI
Sbjct: 4   FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAI 63

Query: 64  NEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRCPCI 123
           NEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR PCI
Sbjct: 64  NEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCI 123

Query: 124 QIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           QIIKTATVPAKLCKRE TKQFH+SKIKFPLVF+KVRPP+RKLKTTYKASKPNLFM
Sbjct: 124 QIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. ExPASy Swiss-Prot
Match: Q943F3 (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18A PE=1 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 5.3e-90
Identity = 160/178 (89.89%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           M  FRFHQYQVVGR LP+ +DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI
Sbjct: 1   MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATV  KLCKR++TKQFH S IKFPLV++KVRPPTRKLKTT+KAS+PNLFM
Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. ExPASy Swiss-Prot
Match: Q8L7K0 (60S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 5.9e-89
Identity = 158/178 (88.76%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           M   R HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+
Sbjct: 1   MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPA LCKRESTKQFH+SKIKFPLVF+KVRPPTRKLKTT+KA+KPNLFM
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. ExPASy TrEMBL
Match: A0A5A7UDW7 (60S ribosomal protein L18a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00440 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.6e-97
Identity = 176/178 (98.88%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLV+KKVRPPTRKLKTTYKASKPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. ExPASy TrEMBL
Match: A0A1S3CNY2 (aspartyl protease family protein 2 OS=Cucumis melo OX=3656 GN=LOC103503057 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.6e-97
Identity = 176/178 (98.88%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI
Sbjct: 574 MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 633

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC
Sbjct: 634 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 693

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLV+KKVRPPTRKLKTTYKASKPNLFM
Sbjct: 694 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 751

[Close]

BLAST of CSPI04G21630 vs. ExPASy TrEMBL
Match: A0A6J1FJB5 (protein ASPARTIC PROTEASE IN GUARD CELL 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446249 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.0e-96
Identity = 173/178 (97.19%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MV+FRFHQYQVVGRALPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 610 MVSFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 669

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKE+RDTTLNGAVEQMY EMASRHRVRC
Sbjct: 670 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEFRDTTLNGAVEQMYNEMASRHRVRC 729

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM
Sbjct: 730 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 787

[Close]

BLAST of CSPI04G21630 vs. ExPASy TrEMBL
Match: A0A5D3DAT6 (60S ribosomal protein L18a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00280 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 6.8e-96
Identity = 173/178 (97.19%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MV+FRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVSFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTK+KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKL+TTYKASKPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLRTTYKASKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. ExPASy TrEMBL
Match: A0A1S3BAA5 (60S ribosomal protein L18a OS=Cucumis melo OX=3656 GN=LOC103487514 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 6.8e-96
Identity = 173/178 (97.19%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MV+FRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVSFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTK+KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKL+TTYKASKPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLRTTYKASKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. NCBI nr
Match: KAE8649787.1 (hypothetical protein Csa_012172 [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 8.8e-98
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. NCBI nr
Match: XP_038898916.1 (60S ribosomal protein L18a [Benincasa hispida])

HSP 1 Score: 364.8 bits (935), Expect = 4.3e-97
Identity = 176/178 (98.88%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALPSE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI
Sbjct: 1   MVTFRFHQYQVVGRALPSEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKAS+PNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. NCBI nr
Match: XP_008465452.1 (PREDICTED: aspartyl protease family protein 2 [Cucumis melo])

HSP 1 Score: 364.0 bits (933), Expect = 7.4e-97
Identity = 176/178 (98.88%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI
Sbjct: 574 MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 633

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC
Sbjct: 634 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 693

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLV+KKVRPPTRKLKTTYKASKPNLFM
Sbjct: 694 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 751

[Close]

BLAST of CSPI04G21630 vs. NCBI nr
Match: KAA0052376.1 (60S ribosomal protein L18a [Cucumis melo var. makuwa] >TYK09412.1 60S ribosomal protein L18a [Cucumis melo var. makuwa])

HSP 1 Score: 364.0 bits (933), Expect = 7.4e-97
Identity = 176/178 (98.88%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI
Sbjct: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLV+KKVRPPTRKLKTTYKASKPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKASKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. NCBI nr
Match: XP_031736225.1 (60S ribosomal protein L18a [Cucumis sativus] >KAE8653191.1 hypothetical protein Csa_019606 [Cucumis sativus])

HSP 1 Score: 360.9 bits (925), Expect = 6.3e-96
Identity = 174/178 (97.75%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           MV+FRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVSFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPTK+KNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKVKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. TAIR 10
Match: AT2G34480.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 337.8 bits (865), Expect = 5.3e-93
Identity = 163/178 (91.57%), Postives = 171/178 (96.07%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           M  FRFHQYQVVGRALP+E D  PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPAKLCKRESTKQFH+SKIKFPLVF+KVRPP+RKLKTTYKA+KPNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. TAIR 10
Match: AT3G14600.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 335.1 bits (858), Expect = 3.4e-92
Identity = 161/175 (92.00%), Postives = 168/175 (96.00%), Query Frame = 0


Query: 4   FRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAI 63
           FRFHQYQVVGRALP+E+DEHPKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQ+LAI
Sbjct: 4   FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAI 63

Query: 64  NEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRCPCI 123
           NEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR PCI
Sbjct: 64  NEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCI 123

Query: 124 QIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           QIIKTATVPAKLCKRE TKQFH+SKIKFPLVF+KVRPP+RKLKTTYKASKPNLFM
Sbjct: 124 QIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. TAIR 10
Match: AT1G29965.1 (Ribosomal protein L18ae/LX family protein )

HSP 1 Score: 328.2 bits (840), Expect = 4.2e-90
Identity = 158/178 (88.76%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MVTFRFHQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60
           M   R HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+
Sbjct: 1   MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRC 120
           LAINEIFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 121 PCIQIIKTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           PCIQIIKTATVPA LCKRESTKQFH+SKIKFPLVF+KVRPPTRKLKTT+KA+KPNLFM
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178

[Close]

BLAST of CSPI04G21630 vs. TAIR 10
Match: AT1G29970.2 (60S ribosomal protein L18A-1 )

HSP 1 Score: 324.7 bits (831), Expect = 4.6e-89
Identity = 156/172 (90.70%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 7   HQYQVVGRALPSESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEI 66
           HQYQVVGRALP+E DE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQ+LAINEI
Sbjct: 141 HQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEI 200

Query: 67  FEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRCPCIQII 126
           FEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR PCIQII
Sbjct: 201 FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII 260

Query: 127 KTATVPAKLCKRESTKQFHDSKIKFPLVFKKVRPPTRKLKTTYKASKPNLFM 179
           KTATVPA LCKRESTKQFH+SKIKFPLVF+KVRPPTRKLKTT+KA+KPNLFM
Sbjct: 261 KTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 312

The following BLAST results are available for this feature:

BLAST of CSPI04G21630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ATF5	2.3e-93	92.13	60S ribosomal protein L18a OS=Castanea sativa OX=21020 GN=RPL18A PE=2 SV=1	[more]
P51418	7.5e-92	91.57	60S ribosomal protein L18a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18AB PE=1 SV=...	[more]
Q9LUD4	4.8e-91	92.00	60S ribosomal protein L18a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18AC PE=2 SV=...	[more]
Q943F3	5.3e-90	89.89	60S ribosomal protein L18a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL18A PE...	[more]
Q8L7K0	5.9e-89	88.76	60S ribosomal protein L18a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18AA PE=2 SV=...	[more]

BLAST of CSPI04G21630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UDW7	3.6e-97	98.88	60S ribosomal protein L18a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CNY2	3.6e-97	98.88	aspartyl protease family protein 2 OS=Cucumis melo OX=3656 GN=LOC103503057 PE=3 ...	[more]
A0A6J1FJB5	4.0e-96	97.19	protein ASPARTIC PROTEASE IN GUARD CELL 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3DAT6	6.8e-96	97.19	60S ribosomal protein L18a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BAA5	6.8e-96	97.19	60S ribosomal protein L18a OS=Cucumis melo OX=3656 GN=LOC103487514 PE=3 SV=1	[more]

BLAST of CSPI04G21630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649787.1	8.8e-98	100.00	hypothetical protein Csa_012172 [Cucumis sativus]	[more]
XP_038898916.1	4.3e-97	98.88	60S ribosomal protein L18a [Benincasa hispida]	[more]
XP_008465452.1	7.4e-97	98.88	PREDICTED: aspartyl protease family protein 2 [Cucumis melo]	[more]
KAA0052376.1	7.4e-97	98.88	60S ribosomal protein L18a [Cucumis melo var. makuwa] >TYK09412.1 60S ribosomal ...	[more]
XP_031736225.1	6.3e-96	97.75	60S ribosomal protein L18a [Cucumis sativus] >KAE8653191.1 hypothetical protein ...	[more]

BLAST of CSPI04G21630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34480.1	5.3e-93	91.57	Ribosomal protein L18ae/LX family protein	[more]
AT3G14600.1	3.4e-92	92.00	Ribosomal protein L18ae/LX family protein	[more]
AT1G29965.1	4.2e-90	88.76	Ribosomal protein L18ae/LX family protein	[more]
AT1G29970.2	4.6e-89	90.70	60S ribosomal protein L18A-1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023573	Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A	PFAM	PF01775	Ribosomal_L18A	coord: 7..128 e-value: 1.9E-55 score: 186.1
None	No IPR available	GENE3D	3.10.20.10		coord: 72..147 e-value: 4.9E-42 score: 144.2
None	No IPR available	GENE3D	3.10.20.10		coord: 1..71 e-value: 8.0E-39 score: 133.3
None	No IPR available	PANTHER	PTHR10052:SF45	60S RIBOSOMAL PROTEIN L18A	coord: 1..137
None	No IPR available	PANTHER	PTHR10052:SF45	60S RIBOSOMAL PROTEIN L18A	coord: 138..178
None	No IPR available	SUPERFAMILY	160374	RplX-like	coord: 71..146
IPR021138	60S ribosomal protein L18a/ L20, eukaryotes	PIRSF	PIRSF002190	Ribosomal_L18a	coord: 1..178 e-value: 1.4E-72 score: 240.8
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	PANTHER	PTHR10052	60S RIBOSOMAL PROTEIN L18A	coord: 138..178
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	PANTHER	PTHR10052	60S RIBOSOMAL PROTEIN L18A	coord: 1..137
IPR028877	50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a	HAMAP	MF_00273	Ribosomal_L18Ae	coord: 6..69 score: 24.83511

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G21630.1	CSPI04G21630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006412	translation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003735	structural constituent of ribosome