
CSPI04G21540 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAAATCAAATCAAGAAAAGAAAACTTAAAAAGTAAATAATGAAAAAAATAAATTCTCTATTGAGAAAATGCAAAAGCCTTTCAAGGCAATTGGGAAGATCTTCATCATACAGCAGCTTGAGATCAAAGTCCACAAGAGAAGATCTTTGGGTTTGTGAAAAACAAGAAGAAGACTTTGAGCAACAAATTGAGCAAAAGGTGAGTGGCAGTAATGTAATTTTATATGTTGGAAGTACAAGAAAGAAATATGCAATAAATTCAAAATATTTGAGCCATCCTTTGTTAAATGCTCTTATTGATAAATCCAAGTCTAAGAAATTAGTTGATGATGATGATGATGATGATGGACATGAAGATGATGAAGAATGTATTTTAGTGAGATGTGAAGTTGTTTTATTTGATCATCTTCTGTGGATGTTGGAAAATTCAGATCCAAATATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAACTTTATGTTTTTTAGGATTTG CTCAAATCAAATCAAGAAAAGAAAACTTAAAAAGTAAATAATGAAAAAAATAAATTCTCTATTGAGAAAATGCAAAAGCCTTTCAAGGCAATTGGGAAGATCTTCATCATACAGCAGCTTGAGATCAAAGTCCACAAGAGAAGATCTTTGGGTTTGTGAAAAACAAGAAGAAGACTTTGAGCAACAAATTGAGCAAAAGGTGAGTGGCAGTAATGTAATTTTATATGTTGGAAGTACAAGAAAGAAATATGCAATAAATTCAAAATATTTGAGCCATCCTTTGTTAAATGCTCTTATTGATAAATCCAAGTCTAAGAAATTAGTTGATGATGATGATGATGATGATGGACATGAAGATGATGAAGAATGTATTTTAGTGAGATGTGAAGTTGTTTTATTTGATCATCTTCTGTGGATGTTGGAAAATTCAGATCCAAATATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAACTTTATGTTTTTTAGGATTTG ATGAAAAAAATAAATTCTCTATTGAGAAAATGCAAAAGCCTTTCAAGGCAATTGGGAAGATCTTCATCATACAGCAGCTTGAGATCAAAGTCCACAAGAGAAGATCTTTGGGTTTGTGAAAAACAAGAAGAAGACTTTGAGCAACAAATTGAGCAAAAGGTGAGTGGCAGTAATGTAATTTTATATGTTGGAAGTACAAGAAAGAAATATGCAATAAATTCAAAATATTTGAGCCATCCTTTGTTAAATGCTCTTATTGATAAATCCAAGTCTAAGAAATTAGTTGATGATGATGATGATGATGATGGACATGAAGATGATGAAGAATGTATTTTAGTGAGATGTGAAGTTGTTTTATTTGATCATCTTCTGTGGATGTTGGAAAATTCAGATCCAAATATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAACTTTATGTTTTTTAG MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF* Homology
BLAST of CSPI04G21540 vs. ExPASy Swiss-Prot
Match: Q9LQI6 (Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.4e-12 Identity = 37/95 (38.95%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of CSPI04G21540 vs. ExPASy Swiss-Prot
Match: Q9C9E1 (Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11 Identity = 37/90 (41.11%), Postives = 53/90 (58.89%), Query Frame = 0
BLAST of CSPI04G21540 vs. ExPASy Swiss-Prot
Match: Q29PU2 (Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.3e-09 Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 0
BLAST of CSPI04G21540 vs. ExPASy TrEMBL
Match: A0A1S3B9J9 (uncharacterized protein LOC103487659 OS=Cucumis melo OX=3656 GN=LOC103487659 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66 Identity = 140/155 (90.32%), Postives = 144/155 (92.90%), Query Frame = 0
BLAST of CSPI04G21540 vs. ExPASy TrEMBL
Match: A0A6J1C0S4 (uncharacterized protein LOC111007398 OS=Momordica charantia OX=3673 GN=LOC111007398 PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.3e-51 Identity = 117/157 (74.52%), Postives = 128/157 (81.53%), Query Frame = 0
BLAST of CSPI04G21540 vs. ExPASy TrEMBL
Match: B9RI47 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1576420 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 8.3e-39 Identity = 95/149 (63.76%), Postives = 112/149 (75.17%), Query Frame = 0
BLAST of CSPI04G21540 vs. ExPASy TrEMBL
Match: A0A0A0L464 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G607030 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.6e-37 Identity = 96/149 (64.43%), Postives = 97/149 (65.10%), Query Frame = 0
BLAST of CSPI04G21540 vs. ExPASy TrEMBL
Match: A0A2C9UHW2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G016100 PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 1.6e-37 Identity = 94/150 (62.67%), Postives = 113/150 (75.33%), Query Frame = 0
BLAST of CSPI04G21540 vs. NCBI nr
Match: XP_011653970.1 (auxin-responsive protein SAUR78 [Cucumis sativus] >KAE8649782.1 hypothetical protein Csa_012026 [Cucumis sativus]) HSP 1 Score: 287.0 bits (733), Expect = 9.6e-74 Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of CSPI04G21540 vs. NCBI nr
Match: XP_008444291.1 (PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo]) HSP 1 Score: 261.5 bits (667), Expect = 4.3e-66 Identity = 140/155 (90.32%), Postives = 144/155 (92.90%), Query Frame = 0
BLAST of CSPI04G21540 vs. NCBI nr
Match: XP_038899559.1 (auxin-responsive protein SAUR78 [Benincasa hispida]) HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57 Identity = 126/153 (82.35%), Postives = 139/153 (90.85%), Query Frame = 0
BLAST of CSPI04G21540 vs. NCBI nr
Match: XP_023536060.1 (auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 218.8 bits (556), Expect = 3.2e-53 Identity = 119/159 (74.84%), Postives = 131/159 (82.39%), Query Frame = 0
BLAST of CSPI04G21540 vs. NCBI nr
Match: KAG7024703.1 (hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 215.7 bits (548), Expect = 2.7e-52 Identity = 118/162 (72.84%), Postives = 129/162 (79.63%), Query Frame = 0
BLAST of CSPI04G21540 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 106.3 bits (264), Expect = 2.2e-23 Identity = 67/148 (45.27%), Postives = 96/148 (64.86%), Query Frame = 0
BLAST of CSPI04G21540 vs. TAIR 10
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 72.0 bits (175), Expect = 4.5e-13 Identity = 37/95 (38.95%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of CSPI04G21540 vs. TAIR 10
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12 Identity = 37/90 (41.11%), Postives = 53/90 (58.89%), Query Frame = 0
BLAST of CSPI04G21540 vs. TAIR 10
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10 Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 0
BLAST of CSPI04G21540 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 42.0 bits (97), Expect = 5.0e-04 Identity = 24/86 (27.91%), Postives = 43/86 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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