Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACATAAAGCTTGAAACAACGAGGCTTGATTTCTATAAAACACAACAATCACAAATTCGTTCGGAGTTGTATCAAGGGATCATTGATGTATTAAATGCAGGAGAAACGAGGGGAGACAAGGTTGGAAAACGTGTCGTTCTACCTTCAACTTTTATTGGTGGTCCTAGAGACATGCGGCGTCGATATTTAGATGCAATGACCTTAATACAACATTATGGGAAGCCAAATCTTTTCATAACAATGACTTGCAATTCTGAAGGGAAGGAAATAAGAGAAGAACTTATGGAAGGACAACAATCTCACGATAAACCAGATCTAACTTTAAGAGTATTTAGAGGAAAGTTAATGGACTTAAAAGACCAAATTATCCACAAGGAAATATTTGGAAAAGTTGCAGTGTTCGTATATGTGATTGAATTTCAAAAACGAGATCTTCCACACCTACACATGTTGGTAATATTGAAAAGAGATTTCAAGATTACTAATGCTGACCAATATGATAAATATGTTCGCGCGTAA
mRNA sequence
ATGTACATAAAGCTTGAAACAACGAGGCTTGATTTCTATAAAACACAACAATCACAAATTCGTTCGGAGTTGTATCAAGGGATCATTGATGTATTAAATGCAGGAGAAACGAGGGGAGACAAGGTTGGAAAACGTGTCGTTCTACCTTCAACTTTTATTGGTGGTCCTAGAGACATGCGGCGTCGATATTTAGATGCAATGACCTTAATACAACATTATGGGAAGCCAAATCTTTTCATAACAATGACTTGCAATTCTGAAGGGAAGGAAATAAGAGAAGAACTTATGGAAGGACAACAATCTCACGATAAACCAGATCTAACTTTAAGAGTATTTAGAGGAAAGTTAATGGACTTAAAAGACCAAATTATCCACAAGGAAATATTTGGAAAAGTTGCAGTGTTCGTATATGTGATTGAATTTCAAAAACGAGATCTTCCACACCTACACATGTTGGTAATATTGAAAAGAGATTTCAAGATTACTAATGCTGACCAATATGATAAATATGTTCGCGCGTAA
Coding sequence (CDS)
ATGTACATAAAGCTTGAAACAACGAGGCTTGATTTCTATAAAACACAACAATCACAAATTCGTTCGGAGTTGTATCAAGGGATCATTGATGTATTAAATGCAGGAGAAACGAGGGGAGACAAGGTTGGAAAACGTGTCGTTCTACCTTCAACTTTTATTGGTGGTCCTAGAGACATGCGGCGTCGATATTTAGATGCAATGACCTTAATACAACATTATGGGAAGCCAAATCTTTTCATAACAATGACTTGCAATTCTGAAGGGAAGGAAATAAGAGAAGAACTTATGGAAGGACAACAATCTCACGATAAACCAGATCTAACTTTAAGAGTATTTAGAGGAAAGTTAATGGACTTAAAAGACCAAATTATCCACAAGGAAATATTTGGAAAAGTTGCAGTGTTCGTATATGTGATTGAATTTCAAAAACGAGATCTTCCACACCTACACATGTTGGTAATATTGAAAAGAGATTTCAAGATTACTAATGCTGACCAATATGATAAATATGTTCGCGCGTAA
Protein sequence
MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLRVFRGKLMDLKDQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA*
Homology
BLAST of CSPI04G21520 vs. ExPASy TrEMBL
Match:
A0A6J1DWY2 (uncharacterized protein LOC111024835 OS=Momordica charantia OX=3673 GN=LOC111024835 PE=4 SV=1)
HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79
Identity = 147/173 (84.97%), Postives = 160/173 (92.49%), Query Frame = 0
Query: 1 MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMR 60
MYIKLETTRLDFYK QQS IRSELYQGI+DV+NAGETRGDKVGKRVVLPSTFIGGPRDMR
Sbjct: 170 MYIKLETTRLDFYKKQQSHIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMR 229
Query: 61 RRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLRVFRGKLMDLK 120
RRYLDAMTL+QH+GKP+LFITMTCN+E KEIREEL+EGQ S D+PDLT RVFRGKLMDLK
Sbjct: 230 RRYLDAMTLVQHFGKPDLFITMTCNTEWKEIREELIEGQLSQDRPDLTSRVFRGKLMDLK 289
Query: 121 DQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA 174
+QI+ KEIFGKVA FVYVIEFQKR LPH+HML+ILK+DFKITN D YD YV A
Sbjct: 290 NQIVQKEIFGKVAAFVYVIEFQKRGLPHMHMLIILKKDFKITNVDLYDNYVSA 342
BLAST of CSPI04G21520 vs. ExPASy TrEMBL
Match:
A0A5B7A9C3 (ATP-dependent DNA helicase OS=Davidia involucrata OX=16924 GN=Din_021512 PE=3 SV=1)
HSP 1 Score: 263.8 bits (673), Expect = 4.9e-67
Identity = 122/173 (70.52%), Postives = 150/173 (86.71%), Query Frame = 0
Query: 1 MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMR 60
MYIKLETTRLD+Y+ QQS IR++LYQGI+D + AGETRG++VG+R+VLP++F+GGPRDMR
Sbjct: 434 MYIKLETTRLDYYRRQQSNIRADLYQGIVDSVMAGETRGNQVGQRIVLPASFVGGPRDMR 493
Query: 61 RRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLRVFRGKLMDLK 120
RRYLDA+ L+Q +GKP+LFITMTCN + KE+++EL EGQ+ D+PDLT RVFR KL DLK
Sbjct: 494 RRYLDAIALVQRFGKPDLFITMTCNPDWKEVQDELQEGQRPQDRPDLTSRVFRAKLQDLK 553
Query: 121 DQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA 174
DQ+ K IFGKVA VYVIEFQKR LPH HML+ILK ++KITNADQYDK+V A
Sbjct: 554 DQLFKKAIFGKVAAHVYVIEFQKRGLPHAHMLIILKSEYKITNADQYDKFVCA 606
BLAST of CSPI04G21520 vs. ExPASy TrEMBL
Match:
A0A6P6V0H4 (uncharacterized protein LOC113716088 OS=Coffea arabica OX=13443 GN=LOC113716088 PE=4 SV=1)
HSP 1 Score: 245.0 bits (624), Expect = 2.4e-61
Identity = 116/171 (67.84%), Postives = 141/171 (82.46%), Query Frame = 0
Query: 3 IKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMRRR 62
IKLETTRLDFY+ +Q +IR+ELYQGI+D + AGET G++VG+R+VLP FIGGPRDMRRR
Sbjct: 187 IKLETTRLDFYRRKQGEIRAELYQGIVDSVMAGETSGNQVGQRIVLPILFIGGPRDMRRR 246
Query: 63 YLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLRVFRGKLMDLKDQ 122
YLDAM L++ +GKP+LFITMTCN E +EI+E L EGQ + D+PD RVFR KL DLKDQ
Sbjct: 247 YLDAMALVERFGKPDLFITMTCNPEWQEIQENLFEGQTTQDRPDWVARVFRAKLQDLKDQ 306
Query: 123 IIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA 174
+ KEIFGK A V+VIEFQKR LPH HML+ILK D+KIT+ DQ+DK+V A
Sbjct: 307 LFKKEIFGKAAAQVHVIEFQKRGLPHAHMLIILKPDYKITSPDQFDKFVCA 357
BLAST of CSPI04G21520 vs. ExPASy TrEMBL
Match:
A0A1S4BAU6 (uncharacterized protein LOC107806316 OS=Nicotiana tabacum OX=4097 GN=LOC107806316 PE=4 SV=1)
HSP 1 Score: 242.7 bits (618), Expect = 1.2e-60
Identity = 112/173 (64.74%), Postives = 143/173 (82.66%), Query Frame = 0
Query: 1 MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMR 60
MYIKLET RL+F++ QQ+ +R E+ QGI+D + AGE RGDKVG+RV+LP++FIGGPRDMR
Sbjct: 166 MYIKLETIRLEFFRLQQALLRREILQGIVDSIMAGEYRGDKVGQRVILPASFIGGPRDMR 225
Query: 61 RRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLRVFRGKLMDLK 120
RRY+DAM L+Q +GKP+LFITMTCN + EI+E L EGQ + D+PDL RVFR KL DLK
Sbjct: 226 RRYMDAMALVQRFGKPDLFITMTCNPDWVEIQENLCEGQLAQDRPDLVTRVFRAKLQDLK 285
Query: 121 DQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA 174
DQI K+IFG VA V+V+EFQKR LPH+H+L+IL++ +KIT ADQYDK++ A
Sbjct: 286 DQIFKKKIFGPVAAHVFVVEFQKRGLPHIHLLIILEQGYKITLADQYDKFISA 338
BLAST of CSPI04G21520 vs. ExPASy TrEMBL
Match:
A0A6P5G2W9 (ATP-dependent DNA helicase OS=Ananas comosus OX=4615 GN=LOC109718258 PE=3 SV=1)
HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 112/173 (64.74%), Postives = 141/173 (81.50%), Query Frame = 0
Query: 1 MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMR 60
MYIK+E+TRLDF Q++IR++LYQGI+D + +GE RG+ +GKR+VLPS+FIGGPRDMR
Sbjct: 448 MYIKIESTRLDFILNDQTRIRADLYQGIVDSVASGELRGNMIGKRIVLPSSFIGGPRDMR 507
Query: 61 RRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLRVFRGKLMDLK 120
RRYLDAM L+Q YGKP++F+TMTCN + +EIR EL GQ + D+PDLT R+FR KL DLK
Sbjct: 508 RRYLDAMALVQKYGKPDIFLTMTCNPDWEEIRSELEPGQLAQDRPDLTSRIFRAKLEDLK 567
Query: 121 DQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA 174
DQ+ K IFG+VA V+VIEFQKR LPH+H L+I++ FKITN DQYDK V A
Sbjct: 568 DQLFKKSIFGEVAAHVHVIEFQKRGLPHVHFLIIMRNSFKITNPDQYDKIVSA 620
BLAST of CSPI04G21520 vs. NCBI nr
Match:
XP_022158322.1 (uncharacterized protein LOC111024835 [Momordica charantia])
HSP 1 Score: 305.8 bits (782), Expect = 2.3e-79
Identity = 147/173 (84.97%), Postives = 160/173 (92.49%), Query Frame = 0
Query: 1 MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMR 60
MYIKLETTRLDFYK QQS IRSELYQGI+DV+NAGETRGDKVGKRVVLPSTFIGGPRDMR
Sbjct: 170 MYIKLETTRLDFYKKQQSHIRSELYQGIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMR 229
Query: 61 RRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLRVFRGKLMDLK 120
RRYLDAMTL+QH+GKP+LFITMTCN+E KEIREEL+EGQ S D+PDLT RVFRGKLMDLK
Sbjct: 230 RRYLDAMTLVQHFGKPDLFITMTCNTEWKEIREELIEGQLSQDRPDLTSRVFRGKLMDLK 289
Query: 121 DQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA 174
+QI+ KEIFGKVA FVYVIEFQKR LPH+HML+ILK+DFKITN D YD YV A
Sbjct: 290 NQIVQKEIFGKVAAFVYVIEFQKRGLPHMHMLIILKKDFKITNVDLYDNYVSA 342
BLAST of CSPI04G21520 vs. NCBI nr
Match:
XP_020266738.1 (uncharacterized protein LOC109842248 [Asparagus officinalis])
HSP 1 Score: 251.9 bits (642), Expect = 4.0e-63
Identity = 115/173 (66.47%), Postives = 145/173 (83.82%), Query Frame = 0
Query: 1 MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMR 60
MY+KLETTRLDF++ QQS IR+ELYQGI+D + AGETRGD+VG RVVLP +FIGGPRDMR
Sbjct: 406 MYVKLETTRLDFFRKQQSNIRAELYQGIVDSVTAGETRGDQVGHRVVLPPSFIGGPRDMR 465
Query: 61 RRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLRVFRGKLMDLK 120
RRY+DAM L+Q YGKP+LFIT+TCN + EIR EL+ GQ + D+PDL+ RVFRGK+ DLK
Sbjct: 466 RRYMDAMALVQRYGKPDLFITITCNPDWDEIRNELLNGQTAQDRPDLSARVFRGKIEDLK 525
Query: 121 DQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA 174
DQ+ +E+FGKVA VYVIEFQKR LPH H+L+ILK ++K+ + D +DK++ A
Sbjct: 526 DQLFKEEVFGKVAARVYVIEFQKRGLPHAHILLILKHEYKLMSPDHFDKFISA 578
BLAST of CSPI04G21520 vs. NCBI nr
Match:
XP_020255467.1 (uncharacterized protein LOC109832530 [Asparagus officinalis])
HSP 1 Score: 250.4 bits (638), Expect = 1.2e-62
Identity = 114/173 (65.90%), Postives = 145/173 (83.82%), Query Frame = 0
Query: 1 MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMR 60
MYIKLETTRLD+++ +QS+IR+E+YQGI+D L GETRGD+VG+RV+LP++FIGGPRDMR
Sbjct: 182 MYIKLETTRLDYFRNKQSEIRAEVYQGIVDSLTTGETRGDQVGQRVILPASFIGGPRDMR 241
Query: 61 RRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLRVFRGKLMDLK 120
RRY+DAM L+Q +GKP++FITMTCN + KEI++EL+ GQ + D+PDLT RVFR KL DLK
Sbjct: 242 RRYMDAMALVQRFGKPDIFITMTCNPDWKEIKDELLMGQVAQDRPDLTSRVFRSKLEDLK 301
Query: 121 DQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA 174
DQ+ K +FG+V VYVIEFQKR LPH H+LVILK D KI DQ++KY+ A
Sbjct: 302 DQLFKKNVFGRVGAHVYVIEFQKRGLPHAHILVILKEDCKILTPDQFNKYISA 354
BLAST of CSPI04G21520 vs. NCBI nr
Match:
XP_012829391.1 (PREDICTED: uncharacterized protein LOC105950571 [Erythranthe guttata])
HSP 1 Score: 250.0 bits (637), Expect = 1.5e-62
Identity = 117/173 (67.63%), Postives = 145/173 (83.82%), Query Frame = 0
Query: 1 MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMR 60
MYIKLETTRLD+Y+ QS +RSELYQGI++ + GETRG +VGKRVVLP++FIGGPRDMR
Sbjct: 394 MYIKLETTRLDYYRQNQSNLRSELYQGIMNSVLKGETRGSEVGKRVVLPASFIGGPRDMR 453
Query: 61 RRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLRVFRGKLMDLK 120
RRYLDA+ L+Q +GKP+LFITMTCN E KEI+E L +GQ++ D+PDLT RVFR KL DLK
Sbjct: 454 RRYLDALALVQRFGKPDLFITMTCNPEWKEIQENLYDGQKAQDRPDLTSRVFRAKLQDLK 513
Query: 121 DQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA 174
DQ+ KEIFGKV V+VIEFQKR LPH H+LVI+K ++KIT+ D +D++V A
Sbjct: 514 DQLFKKEIFGKVVAHVHVIEFQKRGLPHAHILVIMKSEYKITSPDNFDRFVSA 566
BLAST of CSPI04G21520 vs. NCBI nr
Match:
XP_020243540.1 (uncharacterized protein LOC109821791 [Asparagus officinalis])
HSP 1 Score: 246.5 bits (628), Expect = 1.7e-61
Identity = 117/173 (67.63%), Postives = 143/173 (82.66%), Query Frame = 0
Query: 1 MYIKLETTRLDFYKTQQSQIRSELYQGIIDVLNAGETRGDKVGKRVVLPSTFIGGPRDMR 60
MYIKLETTRLD+++ +QS+IR+EL+QGI+D + AGE +VGKR+VLPS+FIGGPRDMR
Sbjct: 1 MYIKLETTRLDYFRNKQSEIRAELFQGIVDSVAAGEANASQVGKRIVLPSSFIGGPRDMR 60
Query: 61 RRYLDAMTLIQHYGKPNLFITMTCNSEGKEIREELMEGQQSHDKPDLTLRVFRGKLMDLK 120
RRYLDAM+L+Q +GKP+LFITMTCN E +EI E+L GQ +D+PDLT R+FR KL DLK
Sbjct: 61 RRYLDAMSLVQRFGKPDLFITMTCNPEWEEIIEQLHPGQSHNDRPDLTSRIFRAKLQDLK 120
Query: 121 DQIIHKEIFGKVAVFVYVIEFQKRDLPHLHMLVILKRDFKITNADQYDKYVRA 174
DQ+ KEIFGKV V+VIEFQKR LPH H+L+IL D KIT +DQYDKYV A
Sbjct: 121 DQLFKKEIFGKVVAHVHVIEFQKRGLPHAHILIILIGDHKITLSDQYDKYVSA 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DWY2 | 1.1e-79 | 84.97 | uncharacterized protein LOC111024835 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A5B7A9C3 | 4.9e-67 | 70.52 | ATP-dependent DNA helicase OS=Davidia involucrata OX=16924 GN=Din_021512 PE=3 SV... | [more] |
A0A6P6V0H4 | 2.4e-61 | 67.84 | uncharacterized protein LOC113716088 OS=Coffea arabica OX=13443 GN=LOC113716088 ... | [more] |
A0A1S4BAU6 | 1.2e-60 | 64.74 | uncharacterized protein LOC107806316 OS=Nicotiana tabacum OX=4097 GN=LOC10780631... | [more] |
A0A6P5G2W9 | 1.5e-60 | 64.74 | ATP-dependent DNA helicase OS=Ananas comosus OX=4615 GN=LOC109718258 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_022158322.1 | 2.3e-79 | 84.97 | uncharacterized protein LOC111024835 [Momordica charantia] | [more] |
XP_020266738.1 | 4.0e-63 | 66.47 | uncharacterized protein LOC109842248 [Asparagus officinalis] | [more] |
XP_020255467.1 | 1.2e-62 | 65.90 | uncharacterized protein LOC109832530 [Asparagus officinalis] | [more] |
XP_012829391.1 | 1.5e-62 | 67.63 | PREDICTED: uncharacterized protein LOC105950571 [Erythranthe guttata] | [more] |
XP_020243540.1 | 1.7e-61 | 67.63 | uncharacterized protein LOC109821791 [Asparagus officinalis] | [more] |
Match Name | E-value | Identity | Description | |