CSPI04G19500 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G19500
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 17307485 .. 17307826 (+)
RNA-Seq ExpressionCSPI04G19500
SyntenyCSPI04G19500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAACAACTGTGCACAACAAAGATTCAAAAGCTACTGATCGATCCTCATGCCTTTGGATCAATGTTAGGGAACGAGACGTGTGAAGAAAGCAAGGAAGACGAAGAATCGAGAGAAATTCTAATACTGGTCGAACAAGTGTGTAAAATAGACACTTATTGTTGTCCACAATAGAAGCAAGTTGTCAAAGATAGGTCAGAACAAGACAAAAGGAAGGCAAGAAAAATCAGAGAAGGGTTGAGTATAGAAAAAAATATCCGCAAAGAATATCAAAGGCAGTCGGAGAGAGATCAGTTGGAGAGGGATCGAGATCTTATCAAATTTAAATGGGCAAGGAGA

mRNA sequence

ATGGTGGAACAACTGTGCACAACAAAGATTCAAAAGCTACTGATCGATCCTCATGCCTTTGGATCAATGTTAGGGAACGAGACGTGTGAAGAAAGCAAGGAAGACGAAGAATCGAGAGAAATTCTAATACTGGTCGAACAAAAGCAAGTTGTCAAAGATAGGTCAGAACAAGACAAAAGGAAGGCAAGAAAAATCAGAGAAGGGTTGAGTATAGAAAAAAATATCCGCAAAGAATATCAAAGGCAGTCGGAGAGAGATCAGTTGGAGAGGGATCGAGATCTTATCAAATTTAAATGGGCAAGGAGA

Coding sequence (CDS)

ATGGTGGAACAACTGTGCACAACAAAGATTCAAAAGCTACTGATCGATCCTCATGCCTTTGGATCAATGTTAGGGAACGAGACGTGTGAAGAAAGCAAGGAAGACGAAGAATCGAGAGAAATTCTAATACTGGTCGAACAAAAGCAAGTTGTCAAAGATAGGTCAGAACAAGACAAAAGGAAGGCAAGAAAAATCAGAGAAGGGTTGAGTATAGAAAAAAATATCCGCAAAGAATATCAAAGGCAGTCGGAGAGAGATCAGTTGGAGAGGGATCGAGATCTTATCAAATTTAAATGGGCAAGGAGA

Protein sequence

MVEQLCTTKIQKLLIDPHAFGSMLGNETCEESKEDEESREILILVEQKQVVKDRSEQDKRKARKIREGLSIEKNIRKEYQRQSERDQLERDRDLIKFKWARR
Homology
[Close]
BLAST of CSPI04G19500 vs. ExPASy TrEMBL
Match: A0A5A7V341 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00850 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-08
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 0 

Query: 1  MVEQLCTT-KIQKLLIDPHAFGSMLGNETCEESKEDEESREILILVEQKQVVK------D 60
          MVEQ CTT KI+KLLIDPHAF SMLGNE+CE +KEDEES+E L LV++   ++      +
Sbjct: 1  MVEQPCTTKKIRKLLIDPHAFASMLGNESCEGNKEDEESKETLTLVKEMPKIETDIVGHN 60

Query: 61 RSEQDKRKARKIREGLSIEKNIRKEYQRQ 83
          RS+  K    K +EG   +KN R+   R+
Sbjct: 61 RSKFSKINQNKTKEG---KKNQRRVEDRE 86

[Close]
BLAST of CSPI04G19500 vs. NCBI nr
Match: KAA0062483.1 (hypothetical protein E6C27_scaffold130G00770 [Cucumis melo var. makuwa] >TYK27401.1 hypothetical protein E5676_scaffold325G00850 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 3.7e-08
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 0 

Query: 1  MVEQLCTT-KIQKLLIDPHAFGSMLGNETCEESKEDEESREILILVEQKQVVK------D 60
          MVEQ CTT KI+KLLIDPHAF SMLGNE+CE +KEDEES+E L LV++   ++      +
Sbjct: 1  MVEQPCTTKKIRKLLIDPHAFASMLGNESCEGNKEDEESKETLTLVKEMPKIETDIVGHN 60

Query: 61 RSEQDKRKARKIREGLSIEKNIRKEYQRQ 83
          RS+  K    K +EG   +KN R+   R+
Sbjct: 61 RSKFSKINQNKTKEG---KKNQRRVEDRE 86

The following BLAST results are available for this feature:
BLAST of CSPI04G19500 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G19500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V3411.8e-0851.69Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CSPI04G19500 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062483.13.7e-0851.69hypothetical protein E6C27_scaffold130G00770 [Cucumis melo var. makuwa] >TYK2740... [more]
BLAST of CSPI04G19500 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G19500.1CSPI04G19500.1mRNA