CSPI04G19290 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G19290
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 16981673 .. 16982182 (+)
RNA-Seq ExpressionCSPI04G19290
SyntenyCSPI04G19290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAAATTATTAATATTAGATAAGGAAAACAGAATATGAATATTCATATTCAAAAAGTTGTGAAAGTTAGATACAAATTCAAAATATCCAACTTATCAAGGTGTAAGCAGAAACCAAATCAACACCAAATCCAACAAGAGGGCAGACGAGGGTGGACGAAGGGAGGGCAGACAACTAGATGGAATTTCGACAAATGGGCTAGAAATTGCTTTTGTGTATGTAGAGAGCCGAAAAAGGAGAGAAGTGTGAACTGTGAATTGTTGAAGGAGAGAGTCAAAGAAGACGTGGGATGGGAGTGGAGCTGCGAAGAAGGTTGGATGGGATCCGGGACTGGGAGCTGCGAGGTGAAGTCTACGAAGTGCCAATTGTCGAAGAAGGAGAAAGCCGAAGAAGGATGTGGGATGGGAGTCGAGTGTGGATTAGGAGTGTTGGCCATCGGTTGGCGAACAAGGCGGGACGGGAGTCTACTGGAATGGCTGAAGAAAGATTTAAATCTGAGGAGGAGCTAA

mRNA sequence

AAACAAATTATTAATATTAGATAAGGAAAACAGAATATGAATATTCATATTCAAAAAGTTGTGAAAGTTAGATACAAATTCAAAATATCCAACTTATCAAGGTGTAAGCAGAAACCAAATCAACACCAAATCCAACAAGAGGGCAGACGAGGGTGGACGAAGGGAGGGCAGACAACTAGATGGAATTTCGACAAATGGGCTAGAAATTGCTTTTGTGTATGTAGAGAGCCGAAAAAGGAGAGAAGTGTGAACTGTGAATTGTTGAAGGAGAGAGTCAAAGAAGACGTGGGATGGGAGTGGAGCTGCGAAGAAGGTTGGATGGGATCCGGGACTGGGAGCTGCGAGGTGAAGTCTACGAAGTGCCAATTGTCGAAGAAGGAGAAAGCCGAAGAAGGATGTGGGATGGGAGTCGAGTGTGGATTAGGAGTGTTGGCCATCGGTTGGCGAACAAGGCGGGACGGGAGTCTACTGGAATGGCTGAAGAAAGATTTAAATCTGAGGAGGAGCTAA

Coding sequence (CDS)

ATGAATATTCATATTCAAAAAGTTGTGAAAGTTAGATACAAATTCAAAATATCCAACTTATCAAGGTGTAAGCAGAAACCAAATCAACACCAAATCCAACAAGAGGGCAGACGAGGGTGGACGAAGGGAGGGCAGACAACTAGATGGAATTTCGACAAATGGGCTAGAAATTGCTTTTGTGTATGTAGAGAGCCGAAAAAGGAGAGAAGTGTGAACTGTGAATTGTTGAAGGAGAGAGTCAAAGAAGACGTGGGATGGGAGTGGAGCTGCGAAGAAGGTTGGATGGGATCCGGGACTGGGAGCTGCGAGGTGAAGTCTACGAAGTGCCAATTGTCGAAGAAGGAGAAAGCCGAAGAAGGATGTGGGATGGGAGTCGAGTGTGGATTAGGAGTGTTGGCCATCGGTTGGCGAACAAGGCGGGACGGGAGTCTACTGGAATGGCTGAAGAAAGATTTAAATCTGAGGAGGAGCTAA

Protein sequence

MNIHIQKVVKVRYKFKISNLSRCKQKPNQHQIQQEGRRGWTKGGQTTRWNFDKWARNCFCVCREPKKERSVNCELLKERVKEDVGWEWSCEEGWMGSGTGSCEVKSTKCQLSKKEKAEEGCGMGVECGLGVLAIGWRTRRDGSLLEWLKKDLNLRRS*
Homology
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BLAST of CSPI04G19290 vs. ExPASy TrEMBL
Match: A0A0A0L3K3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G433480 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.2e-09
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 95  MGSGTGSCEVKSTKCQLSKKEKAEEGCGMGVEC 128
           MGSGTGSCEVKSTKCQLSKKEKA+EGCGMGVEC
Sbjct: 1   MGSGTGSCEVKSTKCQLSKKEKAKEGCGMGVEC 33

[Close]
BLAST of CSPI04G19290 vs. NCBI nr
Match: KGN54721.1 (hypothetical protein Csa_012435 [Cucumis sativus])

HSP 1 Score: 71.2 bits (173), Expect = 8.8e-09
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 95  MGSGTGSCEVKSTKCQLSKKEKAEEGCGMGVEC 128
           MGSGTGSCEVKSTKCQLSKKEKA+EGCGMGVEC
Sbjct: 1   MGSGTGSCEVKSTKCQLSKKEKAKEGCGMGVEC 33

The following BLAST results are available for this feature:
BLAST of CSPI04G19290 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G19290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3K34.2e-0996.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G433480 PE=4 SV=1[more]
BLAST of CSPI04G19290 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54721.18.8e-0996.97hypothetical protein Csa_012435 [Cucumis sativus][more]
BLAST of CSPI04G19290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G19290.1CSPI04G19290.1mRNA