CSPI04G18990 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G18990
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	10 kDa chaperonin, mitochondrial-like
Location	Chr4: 16552399 .. 16555400 (-)
RNA-Seq Expression	CSPI04G18990
Synteny	CSPI04G18990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAACTTTCCAGAACGCTGGAGGGGATTTGCTAAATACGAAAGTACCCACAAAACTTCATGGTCCACCAATGTCTATTTACGTAATTTAAACATTGAAGGGTGAAGGCTGCAAAAACCCCTCCTAAACCCTAGACCATTCTTTGTTTTAGGGTTTGAAGTTGAGATTCATTTTCTCTGATTGCTTCAGATGGCTAAACGTTTGCTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTTCCCCCTACCAAGACCAATTCCGGCATTTTGCTTCCTGAGAAGTCCACTAAGGTGAATCTTCCTTCCCTCTCTCCCCCATTTCTTTTTCCATTTCCCTTCAAAAAAATTGTTCGTTACTTTGTATGGAATTCGTCGGAAATTCCATTTCCCCTTCCAATTTTCCCTTTTCTTTTCGTTGTTTTCTTACCCTGATTCTCGAAATTTGCGACACTGAATTCTCTGGGACGACTACACTCGTTTTCTTTCATGGGTATTCTTCTAGTGTCATTTCCGTTTATGCCTATTTTCTTTTTTTGCCTTTTCTCGTTTAATAGTTACTTGGGTTTTTGAGCTCATTTATTGGTTCTCTGATTCATTTCAATATTAACCTATTTAAAGAAGACTTTTAATGTGAATGTTTTCATTTCTTCCTGATTTCAGTGTTAGCGAATGTTCAGTGATGCGATTTGTAACAAACTTTCTCTTTTTTAAGAACGATTGCTTAACAGTTTACGTAGATGTGAATGTAGCTGCTGAACTGTGTGCATGGGATTAATCCGATGCGATCTTTTTTTTTATTTATTTTCAGCAGAAATCTATATTAGTTCATAAGTATTTTTTTTTTTCCGTGGATGAGCTTTGCTGAATAACTTTGATTTAGGGGCCCTTCCTTCCATCAGGATTTTTTAGATTCAGAATGATTCGACCATTTTGCTCATGATAAGTTTAAGTAGTCCATGGATTCTGGCTTGTGTTTTATAACTTAACTCCCTGCATTAGAATGACTAAATTAGCAAAACCTTTCTTCCTGGAATAGTATGTCTGAGTTGTCGAAGGTGGTTGTTATGAGTCTTATGTTTTCATTTTGCATTTTGAAGAGTTTCTGTAAGGTTAGATACTATCATGCATGGTTGGGTCCCCTTTCTCTAGTGGGCTCCCATTTTTTGGTTGAATTTTTTATGCTACTATATCTTTTCATTTTTTTCCTCAATCAAAGTTGTTATAGAAGAAAAAAAGTTGTTGTGACAGTTCAGCTCAGCTTTGTTACTCAATTTGTGGATGTTTATCGTGTCTTTTTTACTTATTTTTGTTCCTCAACTAGCTCAACTCTGGAAAAGTTATCGCTGTTGGTCCTGGCGCTCGTGACAGAGAGGGAAAGATTATTCCTATCTCTGTAAAGGAAGGTGACATGGTTCTCCTACCAGAATATGGAGGAAATGAAGTCAAGCTTGGAGAAAAGCAGTATGTATACCTGTTCTATTGCTTTATTTATTTAGTTTTTGTCTGTTATTTGATCAAGAATTTGGTTTTAAAGTTAACCTGGAAGTTGAAGTGCCCTCAATTTCTCCATATGGCCTAGTCTTTGATCGTTTTTTAAGATTTTGTTGCTCTTGAACTTGCATGCTGTGCTGAACTTTTGGCTGTATTCTGGTGTTGTCAAATTTTTTTTGTTGTTGACCGGTTTACTCTGGCTTGGTCAATTCACGGTTATCTTGGATGTGTCAAGAAAAAAATTCTTATTGTTTGGTACTGCATTATCAGCTGTCTGCTAAGACCTTGAAAACTAGTTTTGATGGTTCTCATCAGCAGTTGGGTTGGGTTAGACTAGACTGTTGTCGATTGCTTTGAGTTAGAATAGTCAGCTATAAGGATTGCCTTGTTTTAATAACTCTAAGCATTGTGTCAGTTAACTTTTCCATGAACAAAGAACAAAACCATAAATCTACAATAATGTATTTTTTTTTGTTCTGAAATTCTGATTTAAATTCAACGCTAACTTGAGGCTGCTGATGCTGGATATGGAGACATAAGCTCAGTAACTGTAATTACTTAGGAATTTAGACTATTATTGAATTATCTTCCACCCTTTGGTAGGCCGTTTAATGATCTTTGTGTAAAGGTTAAATATATGTTTTATCCCTCAGTTTTGGTTAAAGATTTTTCTAGTTAATCCTTAACATGTTAAAAATTTTCAATTATAACCTTTATGTTAAGTGTATGTTATATCTCATTACATATAGTTGATGGTAAGTTTATGTGATATGGTACTTGTTGGGTTAGTAGAATTTTATGAAAGGATTCAAGTCATATAAGACTATAAGAGGAAAATTTCTAAGTAGACATCATTTTCGCTCCTTAACCCTCAGTTTTCACTCCAAATTTTTGCCAATTGACCAAGTGTCATGGCACCTATTCTGATAATTAACCATAATTACTAACGAAAGTGGTAAACATAAAGACCACATTGGAAACATTTGAATTGAAACGAGGACCAAATTGAAATAATATGCAACAAACATGAAGCACTGAAACATACATCTAGTCTTTTATTCAAATACAAGTCCCTTGTGTTGACAATTCGGATTGGCCACTTTTCTTTTATTTGGAGGGCTGTTTCTTCTCTCTACTTAATTGCTGGTGAATGATTTTGTCGTTTGATTTCAGGTTCTATCTATTCCGCGACGAAGATCTATTAGGAACACTTCATGATTGATTGATCTTGTGAAAGTTGGAATGTTTTTCCAAGTCTTAAGCTTCGAGATCTAGAGAGCTATTTTCTGTTGTTTTTACTTGAGTGAGACTTTTATAACATATATTTACGGTCAGAAGACAAAATATTATATGAATTTTTGGTATTTCTCACTCAAACATTTTTTAGGAATCTTGTACGATTGTTGTGCTATTTCTACTTTACCTCATGTCTGACTATAGAGATATATTGATTTGGGTGTGAGATAATTAGTTCAAAATGGTTTTTTGATTTAAAGATATGGGAGCAC

mRNA sequence

AAGAACTTTCCAGAACGCTGGAGGGGATTTGCTAAATACGAAAGTACCCACAAAACTTCATGGTCCACCAATGTCTATTTACGTAATTTAAACATTGAAGGGTGAAGGCTGCAAAAACCCCTCCTAAACCCTAGACCATTCTTTGTTTTAGGGTTTGAAGTTGAGATTCATTTTCTCTGATTGCTTCAGATGGCTAAACGTTTGCTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTTCCCCCTACCAAGACCAATTCCGGCATTTTGCTTCCTGAGAAGTCCACTAAGCTCAACTCTGGAAAAGTTATCGCTGTTGGTCCTGGCGCTCGTGACAGAGAGGGAAAGATTATTCCTATCTCTGTAAAGGAAGGTGACATGGTTCTCCTACCAGAATATGGAGGAAATGAAGTCAAGCTTGGAGAAAAGCAGTTCTATCTATTCCGCGACGAAGATCTATTAGGAACACTTCATGATTGATTGATCTTGTGAAAGTTGGAATGTTTTTCCAAGTCTTAAGCTTCGAGATCTAGAGAGCTATTTTCTGTTGTTTTTACTTGAGTGAGACTTTTATAACATATATTTACGGTCAGAAGACAAAATATTATATGAATTTTTGGTATTTCTCACTCAAACATTTTTTAGGAATCTTGTACGATTGTTGTGCTATTTCTACTTTACCTCATGTCTGACTATAGAGATATATTGATTTGGGTGTGAGATAATTAGTTCAAAATGGTTTTTTGATTTAAAGATATGGGAGCAC

Coding sequence (CDS)

ATGGCTAAACGTTTGCTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTTCCCCCTACCAAGACCAATTCCGGCATTTTGCTTCCTGAGAAGTCCACTAAGCTCAACTCTGGAAAAGTTATCGCTGTTGGTCCTGGCGCTCGTGACAGAGAGGGAAAGATTATTCCTATCTCTGTAAAGGAAGGTGACATGGTTCTCCTACCAGAATATGGAGGAAATGAAGTCAAGCTTGGAGAAAAGCAGTTCTATCTATTCCGCGACGAAGATCTATTAGGAACACTTCATGATTGA

Protein sequence

MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISVKEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD*

Homology

[Close]

BLAST of CSPI04G18990 vs. ExPASy Swiss-Prot
Match: P34893 (10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.9e-37
Identity = 69/97 (71.13%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          M KRL+P  NR+L+++++ P KT SGILLPEKS+KLNSGKVIAVGPG+RD++GK+IP+SV
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD VLLPEYGG +VKLGE +++LFRDED+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of CSPI04G18990 vs. ExPASy Swiss-Prot
Match: Q96539 (10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.9e-37
Identity = 69/97 (71.13%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          M KRL+P  NR+L++ ++ P KT SGILLPEK++KLNSGKVIAVGPG+RD++GK+IP+SV
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD VLLPEYGG +VKLGEK+++LFRDED+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTLHE 97

[Close]

BLAST of CSPI04G18990 vs. ExPASy Swiss-Prot
Match: O59804 (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hsp10 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.4e-21
Identity = 49/97 (50.52%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 2   AKRLLPLLNRVLIEKIVPPTKTNSGILLPEKST-KLNSGKVIAVGPGARDREGKIIPISV 61
           AK ++PLL+R+L+++I   TKT SGI LPEKS  KL+ G+VI+VG G  ++EGK+   SV
Sbjct: 8   AKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEGKLAQPSV 67

Query: 62  KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
             GD VLLP YGG+ +K+GE+++ L+RD +LL  + +
Sbjct: 68  AVGDRVLLPAYGGSNIKVGEEEYSLYRDHELLAIIKE 104

[Close]

BLAST of CSPI04G18990 vs. ExPASy Swiss-Prot
Match: Q9W6X3 (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes OX=8090 GN=hspe1 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.2e-20
Identity = 47/96 (48.96%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 3  KRLLPLLNRVLIEKIVPPTKTNSGILLPEKST-KLNSGKVIAVGPGARDREGKIIPISVK 62
          ++ LPL +RVL+E+++  T T  GI+LPEKS  K+    V+AVGPG+ +++G++ P+SVK
Sbjct: 4  RKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVK 63

Query: 63 EGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
           G+ VLLP+YGG +V L +K ++LFRD D+LG   D
Sbjct: 64 VGEKVLLPQYGGTKVVLEDKDYFLFRDADILGKYVD 99

[Close]

BLAST of CSPI04G18990 vs. ExPASy Swiss-Prot
Match: Q64433 (10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 4.2e-20
Identity = 49/96 (51.04%), Postives = 66/96 (68.75%), Query Frame = 0


Query: 3   KRLLPLLNRVLIEKIVPPTKTNSGILLPEKST-KLNSGKVIAVGPGARDREGKIIPISVK 62
           ++ LPL +RVL+E+    T T  GI+LPEKS  K+    V+AVG G + + G+I P+SVK
Sbjct: 7   RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVK 66

Query: 63  EGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
            GD VLLPEYGG +V L +K ++LFRD D+LG   D
Sbjct: 67  VGDKVLLPEYGGTKVVLDDKDYFLFRDSDILGKYVD 102

[Close]

BLAST of CSPI04G18990 vs. ExPASy TrEMBL
Match: A0A0A0KYT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G426760 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.5e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD
Sbjct: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 97

[Close]

BLAST of CSPI04G18990 vs. ExPASy TrEMBL
Match: A0A1S3C2U3 (10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103495836 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 8.7e-45
Identity = 94/97 (96.91%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKS+KLNSGKVIAVGPGARDREGKIIPISV
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD+VLLPEYGGNEVKLGEKQFYLFRDEDLLGTLH+
Sbjct: 61 KEGDIVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of CSPI04G18990 vs. ExPASy TrEMBL
Match: A0A6J1HUD0 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111466260 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.4e-40
Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKS+KLNSGKVI+VGPG RDR+G IIP+ V
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVIV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEG+ VLLPEYGG EVKLGEKQFYLFRDEDLLGTLH+
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of CSPI04G18990 vs. ExPASy TrEMBL
Match: A0A6J1EUZ7 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438208 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39
Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKS+KLNSGKVI+VGPG RDR+G IIP+ V
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEG+ VLLPEYGG EVKLGEKQFYL+RDEDLLGTLH+
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE 97

[Close]

BLAST of CSPI04G18990 vs. ExPASy TrEMBL
Match: A0A059D9Z0 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03754 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.4e-39
Identity = 80/97 (82.47%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVLIEKIVPP+KTN+GILLPEK+TKLNSGKV+AVGPGARD++GKIIP+SV
Sbjct: 1  MAKRLIPTLNRVLIEKIVPPSKTNTGILLPEKTTKLNSGKVMAVGPGARDKDGKIIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEG+ VLLPEYGG EVKLGEK+++L+RDED+LGTLHD
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKEYHLYRDEDILGTLHD 97

[Close]

BLAST of CSPI04G18990 vs. NCBI nr
Match: XP_004144325.1 (10 kDa chaperonin, mitochondrial [Cucumis sativus] >KGN54688.1 hypothetical protein Csa_012132 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 7.3e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD
Sbjct: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 97

[Close]

BLAST of CSPI04G18990 vs. NCBI nr
Match: XP_008455733.1 (PREDICTED: 10 kDa chaperonin-like [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44
Identity = 94/97 (96.91%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKS+KLNSGKVIAVGPGARDREGKIIPISV
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD+VLLPEYGGNEVKLGEKQFYLFRDEDLLGTLH+
Sbjct: 61 KEGDIVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of CSPI04G18990 vs. NCBI nr
Match: XP_038881343.1 (10 kDa chaperonin, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41
Identity = 87/97 (89.69%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKS+KLNSGKVI++GPGARDREGKIIP++V
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISIGPGARDREGKIIPVTV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD VLLPEYGG EVKLGEKQFYLFRDEDLLGTLH+
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of CSPI04G18990 vs. NCBI nr
Match: KAF3778533.1 (chaperonin [Nymphaea thermarum])

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-40
Identity = 83/97 (85.57%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+PLLNRVL+EKIVPP+KTN+GILLPEK+TKLNSGKVIAVGPG RDREGKIIP+SV
Sbjct: 1  MAKRLIPLLNRVLVEKIVPPSKTNAGILLPEKTTKLNSGKVIAVGPGGRDREGKIIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD VLLPEYGG EVKLGEK+++L+RDED+LGTLHD
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKEYHLYRDEDILGTLHD 97

[Close]

BLAST of CSPI04G18990 vs. NCBI nr
Match: XP_030458617.1 (10 kDa chaperonin, mitochondrial-like [Syzygium oleosum])

HSP 1 Score: 175.6 bits (444), Expect = 2.0e-40
Identity = 83/97 (85.57%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVLIEKIVPP+KTN+GILLPEK+TKLNSGKVIAVGPGARD++GKIIP+SV
Sbjct: 1  MAKRLIPTLNRVLIEKIVPPSKTNTGILLPEKTTKLNSGKVIAVGPGARDKDGKIIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEG+MVLLPEYGG EVKLGEK+F+L+RDED+LGTLHD
Sbjct: 61 KEGEMVLLPEYGGTEVKLGEKEFHLYRDEDILGTLHD 97

[Close]

BLAST of CSPI04G18990 vs. TAIR 10
Match: AT1G23100.1 (GroES-like family protein )

HSP 1 Score: 156.4 bits (394), Expect = 1.2e-38
Identity = 73/97 (75.26%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVL+EKI+PP+KT SGILLPEKS++LNSG+VIAVGPGARDR G +IP+SV
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD VLLPE+GG +VKLGEK+F L+RDED++ TLH+
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATLHE 97

[Close]

BLAST of CSPI04G18990 vs. TAIR 10
Match: AT1G14980.1 (chaperonin 10 )

HSP 1 Score: 155.6 bits (392), Expect = 2.0e-38
Identity = 69/97 (71.13%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          M KRL+P  NR+L+++++ P KT SGILLPEKS+KLNSGKVIAVGPG+RD++GK+IP+SV
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD VLLPEYGG +VKLGE +++LFRDED+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of CSPI04G18990 vs. TAIR 10
Match: AT5G20720.1 (chaperonin 20 )

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10
Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 3   KRLLPLLNRVLIEKIVPPTKTNSGILLPEKS-TKLNSGKVIAVGPGARDREGKIIPISVK 62
           K L PL +RV I+      KT  G+LL E +  K + G VIAVGPG+ D EGKI P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDMVLLPEYGGNEVKLGEKQFYL-FRDEDLLGTL 96
            G  VL  +Y GN+ K  +   Y+  R  D++  L
Sbjct: 218 TGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252

[Close]

BLAST of CSPI04G18990 vs. TAIR 10
Match: AT5G20720.2 (chaperonin 20 )

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10
Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 3   KRLLPLLNRVLIEKIVPPTKTNSGILLPEKS-TKLNSGKVIAVGPGARDREGKIIPISVK 62
           K L PL +RV I+      KT  G+LL E +  K + G VIAVGPG+ D EGKI P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDMVLLPEYGGNEVKLGEKQFYL-FRDEDLLGTL 96
            G  VL  +Y GN+ K  +   Y+  R  D++  L
Sbjct: 218 TGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252

[Close]

BLAST of CSPI04G18990 vs. TAIR 10
Match: AT5G20720.3 (chaperonin 20 )

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10
Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 3   KRLLPLLNRVLIEKIVPPTKTNSGILLPEKS-TKLNSGKVIAVGPGARDREGKIIPISVK 62
           K L PL +RV I+      KT  G+LL E +  K + G VIAVGPG+ D EGKI P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDMVLLPEYGGNEVKLGEKQFYL-FRDEDLLGTL 96
            G  VL  +Y GN+ K  +   Y+  R  D++  L
Sbjct: 218 TGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252

The following BLAST results are available for this feature:

BLAST of CSPI04G18990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34893	2.9e-37	71.13	10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 S...	[more]
Q96539	4.9e-37	71.13	10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1	[more]
O59804	8.4e-21	50.52	10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
Q9W6X3	3.2e-20	48.96	10 kDa heat shock protein, mitochondrial OS=Oryzias latipes OX=8090 GN=hspe1 PE=...	[more]
Q64433	4.2e-20	51.04	10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 ...	[more]

BLAST of CSPI04G18990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYT6	3.5e-46	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G426760 PE=3 SV=1	[more]
A0A1S3C2U3	8.7e-45	96.91	10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103495836 PE=3 SV=1	[more]
A0A6J1HUD0	6.4e-40	86.60	10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC11146626...	[more]
A0A6J1EUZ7	1.4e-39	85.57	10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438...	[more]
A0A059D9Z0	2.4e-39	82.47	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03754 PE=3 SV...	[more]

BLAST of CSPI04G18990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144325.1	7.3e-46	100.00	10 kDa chaperonin, mitochondrial [Cucumis sativus] >KGN54688.1 hypothetical prot...	[more]
XP_008455733.1	1.8e-44	96.91	PREDICTED: 10 kDa chaperonin-like [Cucumis melo]	[more]
XP_038881343.1	1.1e-41	89.69	10 kDa chaperonin, mitochondrial-like [Benincasa hispida]	[more]
KAF3778533.1	1.6e-40	85.57	chaperonin [Nymphaea thermarum]	[more]
XP_030458617.1	2.0e-40	85.57	10 kDa chaperonin, mitochondrial-like [Syzygium oleosum]	[more]

BLAST of CSPI04G18990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23100.1	1.2e-38	75.26	GroES-like family protein	[more]
AT1G14980.1	2.0e-38	71.13	chaperonin 10	[more]
AT5G20720.1	1.8e-10	42.11	chaperonin 20	[more]
AT5G20720.2	1.8e-10	42.11	chaperonin 20	[more]
AT5G20720.3	1.8e-10	42.11	chaperonin 20	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 5..20 score: 31.71 coord: 26..47 score: 39.2 coord: 61..73 score: 50.4 coord: 82..95 score: 22.62
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 4..95 e-value: 1.9E-31 score: 120.5
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 6..94 e-value: 2.4E-24 score: 85.2
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 1..97
IPR020818	GroES chaperonin family	CDD	cd00320	cpn10	coord: 4..95 e-value: 7.3424E-33 score: 107.593
IPR037124	GroES chaperonin superfamily	GENE3D	2.30.33.40	GroES chaperonin	coord: 1..97 e-value: 1.7E-31 score: 110.4
None	No IPR available	PANTHER	PTHR10772:SF37	GROES-LIKE FAMILY PROTEIN	coord: 1..97
IPR018369	Chaperonin GroES, conserved site	PROSITE	PS00681	CHAPERONINS_CPN10	coord: 5..29
IPR011032	GroES-like superfamily	SUPERFAMILY	50129	GroES-like	coord: 3..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G18990.1	CSPI04G18990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051085	chaperone cofactor-dependent protein refolding
biological_process	GO:0006457	protein folding
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051082	unfolded protein binding