CSPI04G18860 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G18860
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3/gypsy retrotransposon protein
LocationChr4: 16376853 .. 16378327 (+)
RNA-Seq ExpressionCSPI04G18860
SyntenyCSPI04G18860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGATTAGTGGAAGAAATGTTAGCATCAGGGATAATAAGGCCGAGTACGAGCCCATATTCCAGTCCCGTATTGCTGGTGAGGAAAAAGGATGGAAGCTGGCGTTTTTGTGTAGATTACAGGGCTCTAAATAATGTAACCGTACCTGATAAGTTTCCAATCCCAGTGATTGAGGAGTTGAATGGAGCTACAATGTTTACTAAGATTGATCTTAAATCAGGATACCATCAGATTAGGATGTGTACATATGACATTGAAAAGATAGCGTTCAGAACCCATGAGGGTCGCTATGAGTTTATGGTGATGCCGTTTGGGTTGACAAACGCACCCTCCACTTTTCAATCATTGATGAATACTATATTCAAACCATACCTTCGAAAATTTGTCTTAGTGTTTTTTGATGATATATTGATCTATAGTAAAGGGTTGAAAGATCACTTGAATCATATGAGAGCAGTATTGGAAGTGCTGAGGAAGAATGGATTATATGCGAATAAGAAGAAATGCAGCTTTGCTCAGTTTCGAGTAGATTACTTGGAACATATTATCTCAGGAGATGGAGTTGAAGTGGATCCTGAAAAGGTCGAGGCTATAAAGAAGTGGCCAGTTCTAGCTAACGTGAGGGAGGTACGAGGATTCCTTGGGTTGACTGGATATTATCGTAAATTTGTCCAGAATTATGGGACAATTGCGGCTCCTTTGACGCAATTATTAAAGATAGGGGGTTTAAGTGGACAAAAGAAACTCAAGAAGCATTCAACAGGTTGAAGCAATCCATGATGACACTTCCGGTATTGGCTCTGCCTGATTTCAGTGTGCCATTTGAAATAGAAACTGATGCTTCTGGATATGGATTGGGAGCTGTATTAGTACAAAACAAACGACCGATTGCATAGTATAGCCATACGTTGGCAATGAGAGATAGGGTGAAACCTGTATATGAAAGGGAGTTAATGGCAGTAGTAATGGCTGTGCAAAGATGGCGTCCGTACTTATTGGGGAAGAAATTTTTAGTCAAGACTGATCAACGATCCCTAAAGTTTCTTTTGGAACAAAGAGTAATTCAACCTCAGTATCAAAAATGGATATCCAAACTTCTTGGATACTCATTCGAAGTGGTTTATAAACCGGGATTGGAAAACAAAGCAGCATATGCATTATCTAGAGTACCAGCAACGGTACAATTGAATCAGTTAACAACTTCTAATGTGATTGATATAGAAGTGATCAAAGCGGAGGTAGATCAAGATGAGAAGCTGAAGAATATTATGAAGAAATTAAATGAGACAGAAGAGAGGAAAGATGGTAAATATTCGATGAAACAGGGTATGTTGATGTATAAAGGTTGAATGGAGTTATCTAAAACATCTAGATTAATTCCAACAATTTTACATACTTATCATGATTCGGTCTTTGGAGGTCACTCGGGATTCTTGCGGACATATAAGAGGATGGCTGCGGAGTTACATTAG

mRNA sequence

ATGGAGAGATTAGTGGAAGAAATGTTAGCATCAGGGATAATAAGGCCGAGTACGAGCCCATATTCCAGTCCCGTATTGCTGGTGAGGAAAAAGGATGGAAGCTGGCGTTTTTGTGTAGATTACAGGGCTCTAAATAATGTAACCGTACCTGATAAGTTTCCAATCCCAGTGATTGAGGAGTTGAATGGAGCTACAATGTTTACTAAGATTGATCTTAAATCAGGATACCATCAGATTAGGATGTGTACATATGACATTGAAAAGATAGCGTTCAGAACCCATGAGGGTCGCTATGAGTTTATGGTGATGCCGTTTGGGTTGACAAACGCACCCTCCACTTTTCAATCATTGATGAATACTATATTCAAACCATACCTTCGAAAATTTGTCTTAGTGTTTTTTGATGATATATTGATCTATAGTAAAGGGTTGAAAGATCACTTGAATCATATGAGAGCAGTATTGGAAGTGCTGAGGAAGAATGGATTATATGCGAATAAGAAGAAATGCAGCTTTGCTCAGTTTCGAGTAGATTACTTGGAACATATTATCTCAGGAGATGGAGTTGAAGTGGATCCTGAAAAGGTCGAGGCTATAAAGAAGTGGCCAGTTCTAGCTAACGTGAGGGAGTGGACAAAAGAAACTCAAGAAGCATTCAACAGGTTGAAGCAATCCATGATGACACTTCCGGTATTGGCTCTGCCTGATTTCAGTGTGCCATTTGAAATAGAAACTGATGCTTCTGGATATGGATTGGGAGCTTATAGCCATACGTTGGCAATGAGAGATAGGGTGAAACCTGTATATGAAAGGGAGTTAATGGCAGTAGTAATGGCTGTGCAAAGATGGCGTCCGTACTTATTGGGGAAGAAATTTTTAGTCAAGACTGATCAACGATCCCTAAAGTTTCTTTTGGAACAAAGAGTAATTCAACCTCAGTATCAAAAATGGATATCCAAACTTCTTGGATACTCATTCGAAGTGGTTTATAAACCGGGATTGGAAAACAAAGCAGCATATGCATTATCTAGAGTACCAGCAACGGTACAATTGAATCAGTTAACAACTTCTAATGTGATTGATATAGAAGTGATCAAAGCGGAGGTAGATCAAGATGAGAAGCTGAAGAATATTATGAAGAAATTAAATGAGACAGAAGAGAGGAAAGATGGTAAATATTCGATGAAACAGGGTCACTCGGGATTCTTGCGGACATATAAGAGGATGGCTGCGGAGTTACATTAG

Coding sequence (CDS)

ATGGAGAGATTAGTGGAAGAAATGTTAGCATCAGGGATAATAAGGCCGAGTACGAGCCCATATTCCAGTCCCGTATTGCTGGTGAGGAAAAAGGATGGAAGCTGGCGTTTTTGTGTAGATTACAGGGCTCTAAATAATGTAACCGTACCTGATAAGTTTCCAATCCCAGTGATTGAGGAGTTGAATGGAGCTACAATGTTTACTAAGATTGATCTTAAATCAGGATACCATCAGATTAGGATGTGTACATATGACATTGAAAAGATAGCGTTCAGAACCCATGAGGGTCGCTATGAGTTTATGGTGATGCCGTTTGGGTTGACAAACGCACCCTCCACTTTTCAATCATTGATGAATACTATATTCAAACCATACCTTCGAAAATTTGTCTTAGTGTTTTTTGATGATATATTGATCTATAGTAAAGGGTTGAAAGATCACTTGAATCATATGAGAGCAGTATTGGAAGTGCTGAGGAAGAATGGATTATATGCGAATAAGAAGAAATGCAGCTTTGCTCAGTTTCGAGTAGATTACTTGGAACATATTATCTCAGGAGATGGAGTTGAAGTGGATCCTGAAAAGGTCGAGGCTATAAAGAAGTGGCCAGTTCTAGCTAACGTGAGGGAGTGGACAAAAGAAACTCAAGAAGCATTCAACAGGTTGAAGCAATCCATGATGACACTTCCGGTATTGGCTCTGCCTGATTTCAGTGTGCCATTTGAAATAGAAACTGATGCTTCTGGATATGGATTGGGAGCTTATAGCCATACGTTGGCAATGAGAGATAGGGTGAAACCTGTATATGAAAGGGAGTTAATGGCAGTAGTAATGGCTGTGCAAAGATGGCGTCCGTACTTATTGGGGAAGAAATTTTTAGTCAAGACTGATCAACGATCCCTAAAGTTTCTTTTGGAACAAAGAGTAATTCAACCTCAGTATCAAAAATGGATATCCAAACTTCTTGGATACTCATTCGAAGTGGTTTATAAACCGGGATTGGAAAACAAAGCAGCATATGCATTATCTAGAGTACCAGCAACGGTACAATTGAATCAGTTAACAACTTCTAATGTGATTGATATAGAAGTGATCAAAGCGGAGGTAGATCAAGATGAGAAGCTGAAGAATATTATGAAGAAATTAAATGAGACAGAAGAGAGGAAAGATGGTAAATATTCGATGAAACAGGGTCACTCGGGATTCTTGCGGACATATAAGAGGATGGCTGCGGAGTTACATTAG

Protein sequence

MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYLEHIISGDGVEVDPEKVEAIKKWPVLANVREWTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGAYSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVIKAEVDQDEKLKNIMKKLNETEERKDGKYSMKQGHSGFLRTYKRMAAELH*
Homology
BLAST of CSPI04G18860 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 8.1e-65
Identity = 149/402 (37.06%), Postives = 214/402 (53.23%), Query Frame = 0

Query: 1   MERLVEEMLASGIIRPSTSPYSSPVLLVRKKD-----GSWRFCVDYRALNNVTVPDKFPI 60
           +E  V+EML  G+IR S SPY+SP  +V KK        +R  +DYR LN +T+PD++PI
Sbjct: 222 VENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPI 281

Query: 61  PVIEELNG----ATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAP 120
           P ++E+ G       FT IDL  G+HQI M    I K AF T  G YE++ MPFGL NAP
Sbjct: 282 PNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAP 341

Query: 121 STFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCS 180
           +TFQ  MN I +P L K  LV+ DDI+I+S  L +HLN ++ V   L    L     KC 
Sbjct: 342 ATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCE 401

Query: 181 FAQFRVDYLEHIISGDGVEVDPEKVEAIKKWPV--------------------LANVREW 240
           F +   ++L HI++ DG++ +P KV+AI  +P+                    + N  + 
Sbjct: 402 FLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADI 461

Query: 241 TK------------ETQ-----EAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA 300
            K            +TQ     EAF +LK  ++  P+L LPDF   F + TDAS   LGA
Sbjct: 462 AKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGA 521

Query: 301 -----------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKF 346
                       S TL   +      E+EL+A+V A + +R YLLG++FL+ +D + L++
Sbjct: 522 VLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRW 581

BLAST of CSPI04G18860 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 8.9e-64
Identity = 145/402 (36.07%), Postives = 209/402 (51.99%), Query Frame = 0

Query: 1   MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGS-----WRFCVDYRALNNVTVPDKFPI 60
           +E  +++ML  GIIR S SPY+SP+ +V KK  +     +R  +DYR LN +TV D+ PI
Sbjct: 223 VESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPI 282

Query: 61  PVIEELNG----ATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAP 120
           P ++E+ G       FT IDL  G+HQI M    + K AF T  G YE++ MPFGL NAP
Sbjct: 283 PNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAP 342

Query: 121 STFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCS 180
           +TFQ  MN I +P L K  LV+ DDI+++S  L +HL  +  V E L K  L     KC 
Sbjct: 343 ATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCE 402

Query: 181 FAQFRVDYLEHIISGDGVEVDPEKVEAIKKWPVLANVRE--------------------- 240
           F +    +L H+++ DG++ +PEK+EAI+K+P+    +E                     
Sbjct: 403 FLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADI 462

Query: 241 ---WTK-------------ETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA 300
               TK             E   AF +LK  +   P+L +PDF+  F + TDAS   LGA
Sbjct: 463 AKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGA 522

Query: 301 -----------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKF 346
                       S TL   +      E+EL+A+V A + +R YLLG+ F + +D + L +
Sbjct: 523 VLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSW 582

BLAST of CSPI04G18860 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.4e-63
Identity = 146/428 (34.11%), Postives = 224/428 (52.34%), Query Frame = 0

Query: 1   MERLVEEMLASGIIRPSTSPYSSPVLLVRKK-----DGSWRFCVDYRALNNVTVPDKFPI 60
           +ER ++E+L  GIIRPS SPY+SP+ +V KK     +  +R  VD++ LN VT+PD +PI
Sbjct: 139 VERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPI 198

Query: 61  P----VIEELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAP 120
           P     +  L  A  FT +DL SG+HQI M   DI K AF T  G+YEF+ +PFGL NAP
Sbjct: 199 PDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAP 258

Query: 121 STFQSLMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCS 180
           + FQ +++ I + ++ K   V+ DDI+++S+    H  ++R VL  L K  L  N +K  
Sbjct: 259 AIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSH 318

Query: 181 FAQFRVDYLEHIISGDGVEVDPEKVEAIKKWPVLANVREWTK------------------ 240
           F   +V++L +I++ DG++ DP+KV AI + P   +V+E  +                  
Sbjct: 319 FLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKV 378

Query: 241 ----------------------------ETQ-EAFNRLKQSMMTLPVLALPDFSVPFEIE 300
                                       ET  ++FN LK  + +  +LA P F+ PF + 
Sbjct: 379 AKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLT 438

Query: 301 TDASGYGLGA---------------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLG 357
           TDAS + +GA                S +L   +      E+E++A++ ++   R YL G
Sbjct: 439 TDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYG 498

BLAST of CSPI04G18860 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 224.6 bits (571), Expect = 2.1e-57
Identity = 148/439 (33.71%), Postives = 215/439 (48.97%), Query Frame = 0

Query: 1    MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE 60
            + ++V+++L +  I PS SP SSPV+LV KKDG++R CVDYR LN  T+ D FP+P I+ 
Sbjct: 612  INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 671

Query: 61   L----NGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
            L      A +FT +DL SGYHQI M   D  K AF T  G+YE+ VMPFGL NAPSTF  
Sbjct: 672  LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR 731

Query: 121  LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
             M   F+    +FV V+ DDILI+S+  ++H  H+  VLE L+   L   KKKC FA   
Sbjct: 732  YMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEE 791

Query: 181  VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVR--------------------------- 240
             ++L + I    +     K  AI+ +P    V+                           
Sbjct: 792  TEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQ 851

Query: 241  -------EWTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------- 300
                   +WT++  +A ++LK ++   PVL   +    + + TDAS  G+GA        
Sbjct: 852  LFICDKSQWTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNK 911

Query: 301  ---------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLL 360
                     +S +L    +  P  E EL+ ++ A+  +R  L GK F ++TD  SL  L 
Sbjct: 912  NKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQ 971

Query: 361  EQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVI 385
             +     + Q+W+  L  Y F + Y  G +N  A A+SR   T+      TS  ID E  
Sbjct: 972  NKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPE---TSRPIDTESW 1031

BLAST of CSPI04G18860 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 223.4 bits (568), Expect = 4.8e-57
Identity = 148/439 (33.71%), Postives = 214/439 (48.75%), Query Frame = 0

Query: 1    MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE 60
            + ++V+++L +  I PS SP SSPV+LV KKDG++R CVDYR LN  T+ D FP+P I+ 
Sbjct: 638  INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 697

Query: 61   L----NGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
            L      A +FT +DL SGYHQI M   D  K AF T  G+YE+ VMPFGL NAPSTF  
Sbjct: 698  LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR 757

Query: 121  LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
             M   F+    +FV V+ DDILI+S+  ++H  H+  VLE L+   L   KKKC FA   
Sbjct: 758  YMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEE 817

Query: 181  VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVR--------------------------- 240
             ++L + I    +     K  AI+ +P    V+                           
Sbjct: 818  TEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQ 877

Query: 241  -------EWTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA-------- 300
                   +WT++  +A  +LK ++   PVL   +    + + TDAS  G+GA        
Sbjct: 878  LFICDKSQWTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNK 937

Query: 301  ---------YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLL 360
                     +S +L    +  P  E EL+ ++ A+  +R  L GK F ++TD  SL  L 
Sbjct: 938  NKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQ 997

Query: 361  EQRVIQPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVI 385
             +     + Q+W+  L  Y F + Y  G +N  A A+SR   T+      TS  ID E  
Sbjct: 998  NKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYTITPE---TSRPIDTESW 1057

BLAST of CSPI04G18860 vs. ExPASy TrEMBL
Match: A0A5D3BSP2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00980 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.8e-163
Identity = 302/494 (61.13%), Postives = 361/494 (73.08%), Query Frame = 0

Query: 1    MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE- 60
            MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYRA+NN T+PDKFPIPV E 
Sbjct: 654  MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAEE 713

Query: 61   ---ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
               ELNGAT+F+KIDLKSGYHQIRM   DI K AFRTHEG YEF+VMPFGLTNAP+TFQ+
Sbjct: 714  LFDELNGATVFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 773

Query: 121  LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
            LMN+IF+P+LRKFVLVFFDDILIYSK  KDH+ H+  V   LRK+ L+ANKKKC+F Q +
Sbjct: 774  LMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 833

Query: 181  VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVRE-------------------------- 240
            V+YL HIISG+GVEVD EK++A+  WP   N+RE                          
Sbjct: 834  VEYLGHIISGEGVEVDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 893

Query: 241  ---------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA------- 300
                     W ++ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA       
Sbjct: 894  QLLKKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKR 953

Query: 301  ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVI 360
                YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVI
Sbjct: 954  PIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVI 1013

Query: 361  QPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVIKAEVD 415
            QPQYQKW+SKLLGYSFEVVYKPGLENKAA ALSR P  +QLN ++    +D+E IK EV+
Sbjct: 1014 QPQYQKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVE 1073

BLAST of CSPI04G18860 vs. ExPASy TrEMBL
Match: A0A5D3DKH5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001060 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.9e-162
Identity = 300/495 (60.61%), Postives = 359/495 (72.53%), Query Frame = 0

Query: 1    MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE- 60
            MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYR +NN T+PDKFPIPV E 
Sbjct: 564  MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRTVNNATIPDKFPIPVAEE 623

Query: 61   ---ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
               ELNGAT+F+KIDLKSGYHQIRM   DI K AFRTHEG YEF+VMPFGLTNAP+TFQ+
Sbjct: 624  LFDELNGATIFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQA 683

Query: 121  LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
            LMN+IF+P+LRKFVLVFFDDILIYSK  KDH+ H+  V   LRK+ L+ANKKKC+F Q +
Sbjct: 684  LMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 743

Query: 181  VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVRE-------------------------- 240
            V+YL HIISG+GVEVD EK++ +  WP   N+RE                          
Sbjct: 744  VEYLGHIISGEGVEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 803

Query: 241  ---------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA------- 300
                     W ++ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA       
Sbjct: 804  QLLKKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKR 863

Query: 301  ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVI 360
                YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVI
Sbjct: 864  PIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVI 923

Query: 361  QPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVIKAEVD 415
            QPQYQKW+SKLLGYSFEVVYKPGLENKAA ALSR P  +QLN ++    +D+E IK EV+
Sbjct: 924  QPQYQKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVE 983

BLAST of CSPI04G18860 vs. ExPASy TrEMBL
Match: A0A5A7SNE3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001630 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.8e-160
Identity = 299/494 (60.53%), Postives = 357/494 (72.27%), Query Frame = 0

Query: 1   MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE 60
           MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYRA+NN T+PDKFPIPV EE
Sbjct: 244 MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAEE 303

Query: 61  ----LNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
               LNGAT+F+KIDLKS YHQIRM   DI K AFRTHEG YEF+VMPFGLTNAP+TFQ+
Sbjct: 304 LFDKLNGATVFSKIDLKSRYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 363

Query: 121 LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
           LMN+IF+P+L KFVLVFFDDILIYSK  KDH+ H+  V   LRK+ L+ANKKKC+F Q +
Sbjct: 364 LMNSIFRPFLIKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 423

Query: 181 VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVRE-------------------------- 240
           V+YL HIISG+GVEVD EK++A+  WP   N+RE                          
Sbjct: 424 VEYLGHIISGEGVEVDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 483

Query: 241 ---------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA------- 300
                    W K+ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA       
Sbjct: 484 QLLKKGGFKWNKDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQAKR 543

Query: 301 ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVI 360
               YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVI
Sbjct: 544 PIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGTKFVVKTDQKSLKFLLEQRVI 603

Query: 361 QPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVIKAEVD 415
           QPQYQKW+SKLL YSFEVVYKPGLENKAA ALSR P  +QLN ++    +D+E IK EV+
Sbjct: 604 QPQYQKWLSKLLEYSFEVVYKPGLENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVE 663

BLAST of CSPI04G18860 vs. ExPASy TrEMBL
Match: A0A5D3CXB1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001180 PE=4 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 1.2e-159
Identity = 304/494 (61.54%), Postives = 358/494 (72.47%), Query Frame = 0

Query: 1    MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE- 60
            MERLV+EML+SGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPV+E 
Sbjct: 698  MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 757

Query: 61   ---ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
               ELNGA +F+KIDLK+GYHQIRM   DIEK AFRTHEG YEFMVMPFGLTNAPSTFQ+
Sbjct: 758  LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 817

Query: 121  LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
            LMN +FKP+LR+FVLVFFDDILIYSKG+++H  H+  VLE+LR++ LYAN  KC FA+ R
Sbjct: 818  LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTR 877

Query: 181  VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVRE-------------------------- 240
            + YL H IS  G+EVDPEK+ A+K+WP  ANVRE                          
Sbjct: 878  ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 937

Query: 241  ---------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA------- 300
                     WT+ET+ AF +LK++MMTLPVLA+PDF++PFEIE+DASG+G+GA       
Sbjct: 938  QLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKK 997

Query: 301  ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVI 360
                +S  L+ RDR +PVYERELMAVV AVQRWRPYLLG+KF VKTDQRSLKFLLEQRVI
Sbjct: 998  PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVI 1057

Query: 361  QPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVIKAEVD 415
            QPQYQ+WI+KLLGYSFEV+YKPGLENKAA ALSR+  T  LNQLT   ++D+EVI+ EV 
Sbjct: 1058 QPQYQQWIAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVR 1117

BLAST of CSPI04G18860 vs. ExPASy TrEMBL
Match: A0A5A7T6B1 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G002030 PE=4 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 1.2e-159
Identity = 297/494 (60.12%), Postives = 356/494 (72.06%), Query Frame = 0

Query: 1    MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE- 60
            MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYRA+NN T+PDKFPIPV E 
Sbjct: 559  MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAEE 618

Query: 61   ---ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
               ELNGAT+F+KIDLKSGYHQIRM   DI K AFRTHEG YEF+VMPFGLTNAP+TFQ+
Sbjct: 619  LFDELNGATVFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 678

Query: 121  LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
            LMN+IF+P+LRKFVLVFFDDILIYSK  KDH+ H+  V   LRK+ L+ANKKKC+F Q +
Sbjct: 679  LMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 738

Query: 181  VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVRE-------------------------- 240
            V+YL HIISG+GVEVD +K++A+  WP   N+RE                          
Sbjct: 739  VEYLGHIISGEGVEVDSKKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 798

Query: 241  ---------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA------- 300
                     W ++ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+ A       
Sbjct: 799  QLLKKGGFKWNEDAKESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVEAVLIQSKR 858

Query: 301  ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVI 360
                YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQ+VI
Sbjct: 859  PIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQQVI 918

Query: 361  QPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVIKAEVD 414
            QPQYQKW+SKLLGYSFEVVYKP LENKAA ALSR P  +QLN ++    +D+E IK EV+
Sbjct: 919  QPQYQKWLSKLLGYSFEVVYKPNLENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVE 978

BLAST of CSPI04G18860 vs. NCBI nr
Match: TYK02195.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 585.5 bits (1508), Expect = 3.6e-163
Identity = 302/494 (61.13%), Postives = 361/494 (73.08%), Query Frame = 0

Query: 1    MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE- 60
            MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYRA+NN T+PDKFPIPV E 
Sbjct: 654  MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAEE 713

Query: 61   ---ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
               ELNGAT+F+KIDLKSGYHQIRM   DI K AFRTHEG YEF+VMPFGLTNAP+TFQ+
Sbjct: 714  LFDELNGATVFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 773

Query: 121  LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
            LMN+IF+P+LRKFVLVFFDDILIYSK  KDH+ H+  V   LRK+ L+ANKKKC+F Q +
Sbjct: 774  LMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 833

Query: 181  VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVRE-------------------------- 240
            V+YL HIISG+GVEVD EK++A+  WP   N+RE                          
Sbjct: 834  VEYLGHIISGEGVEVDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 893

Query: 241  ---------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA------- 300
                     W ++ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA       
Sbjct: 894  QLLKKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKR 953

Query: 301  ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVI 360
                YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVI
Sbjct: 954  PIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVI 1013

Query: 361  QPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVIKAEVD 415
            QPQYQKW+SKLLGYSFEVVYKPGLENKAA ALSR P  +QLN ++    +D+E IK EV+
Sbjct: 1014 QPQYQKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVE 1073

BLAST of CSPI04G18860 vs. NCBI nr
Match: TYK23779.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 582.0 bits (1499), Expect = 4.0e-162
Identity = 300/495 (60.61%), Postives = 359/495 (72.53%), Query Frame = 0

Query: 1    MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE- 60
            MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYR +NN T+PDKFPIPV E 
Sbjct: 564  MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRTVNNATIPDKFPIPVAEE 623

Query: 61   ---ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
               ELNGAT+F+KIDLKSGYHQIRM   DI K AFRTHEG YEF+VMPFGLTNAP+TFQ+
Sbjct: 624  LFDELNGATIFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQA 683

Query: 121  LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
            LMN+IF+P+LRKFVLVFFDDILIYSK  KDH+ H+  V   LRK+ L+ANKKKC+F Q +
Sbjct: 684  LMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 743

Query: 181  VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVRE-------------------------- 240
            V+YL HIISG+GVEVD EK++ +  WP   N+RE                          
Sbjct: 744  VEYLGHIISGEGVEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 803

Query: 241  ---------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA------- 300
                     W ++ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA       
Sbjct: 804  QLLKKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKR 863

Query: 301  ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVI 360
                YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVI
Sbjct: 864  PIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVI 923

Query: 361  QPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVIKAEVD 415
            QPQYQKW+SKLLGYSFEVVYKPGLENKAA ALSR P  +QLN ++    +D+E IK EV+
Sbjct: 924  QPQYQKWLSKLLGYSFEVVYKPGLENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVE 983

BLAST of CSPI04G18860 vs. NCBI nr
Match: KAA0032310.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 575.5 bits (1482), Expect = 3.8e-160
Identity = 299/494 (60.53%), Postives = 357/494 (72.27%), Query Frame = 0

Query: 1   MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIEE 60
           MERLVEEMLASGIIRPS SP+SSPVLLV+KKDGSWRFCVDYRA+NN T+PDKFPIPV EE
Sbjct: 244 MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAEE 303

Query: 61  ----LNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
               LNGAT+F+KIDLKS YHQIRM   DI K AFRTHEG YEF+VMPFGLTNAP+TFQ+
Sbjct: 304 LFDKLNGATVFSKIDLKSRYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 363

Query: 121 LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
           LMN+IF+P+L KFVLVFFDDILIYSK  KDH+ H+  V   LRK+ L+ANKKKC+F Q +
Sbjct: 364 LMNSIFRPFLIKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 423

Query: 181 VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVRE-------------------------- 240
           V+YL HIISG+GVEVD EK++A+  WP   N+RE                          
Sbjct: 424 VEYLGHIISGEGVEVDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 483

Query: 241 ---------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA------- 300
                    W K+ +E+F +LK +MM+LP LALP+F++PFEIETDASG+G+GA       
Sbjct: 484 QLLKKGGFKWNKDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQAKR 543

Query: 301 ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVI 360
               YSHTL+MRDR +PVYERELMAVV++VQRWRPYLLG KF+VKTDQ+SLKFLLEQRVI
Sbjct: 544 PIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGTKFVVKTDQKSLKFLLEQRVI 603

Query: 361 QPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVIKAEVD 415
           QPQYQKW+SKLL YSFEVVYKPGLENKAA ALSR P  +QLN ++    +D+E IK EV+
Sbjct: 604 QPQYQKWLSKLLEYSFEVVYKPGLENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVE 663

BLAST of CSPI04G18860 vs. NCBI nr
Match: TYK23090.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 572.8 bits (1475), Expect = 2.4e-159
Identity = 304/494 (61.54%), Postives = 358/494 (72.47%), Query Frame = 0

Query: 1    MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE- 60
            MERLV+EML+SGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPV+E 
Sbjct: 638  MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61   ---ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
               ELNGA +F+KIDLK+GYHQIRM   DIEK AFRTHEG YEFMVMPFGLTNAPSTFQ+
Sbjct: 698  LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 757

Query: 121  LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
            LMN +FKP+LR+FVLVFFDDILIYSKG+++H  H+  VLE+LR++ LYAN  KC FA+ R
Sbjct: 758  LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTR 817

Query: 181  VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVRE-------------------------- 240
            + YL H IS  G+EVDPEK+ A+K+WP  ANVRE                          
Sbjct: 818  ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 877

Query: 241  ---------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA------- 300
                     WT+ET+ AF +LK++MMTLPVLA+PDF++PFEIE+DASG+G+GA       
Sbjct: 878  QLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKK 937

Query: 301  ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVI 360
                +S  L+ RDR +PVYERELMAVV AVQRWRPYLLG+KF VKTDQRSLKFLLEQRVI
Sbjct: 938  PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVI 997

Query: 361  QPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVIKAEVD 415
            QPQYQ+WI+KLLGYSFEV+YKPGLENKAA ALSR+  T  LNQLT   ++D+EVI+ EV 
Sbjct: 998  QPQYQQWIAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVR 1057

BLAST of CSPI04G18860 vs. NCBI nr
Match: TYK15990.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 572.8 bits (1475), Expect = 2.4e-159
Identity = 304/494 (61.54%), Postives = 358/494 (72.47%), Query Frame = 0

Query: 1    MERLVEEMLASGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVIE- 60
            MERLV+EML+SGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPV+E 
Sbjct: 698  MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 757

Query: 61   ---ELNGATMFTKIDLKSGYHQIRMCTYDIEKIAFRTHEGRYEFMVMPFGLTNAPSTFQS 120
               ELNGA +F+KIDLK+GYHQIRM   DIEK AFRTHEG YEFMVMPFGLTNAPSTFQ+
Sbjct: 758  LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 817

Query: 121  LMNTIFKPYLRKFVLVFFDDILIYSKGLKDHLNHMRAVLEVLRKNGLYANKKKCSFAQFR 180
            LMN +FKP+LR+FVLVFFDDILIYSKG+++H  H+  VLE+LR++ LYAN  KC FA+ R
Sbjct: 818  LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTR 877

Query: 181  VDYLEHIISGDGVEVDPEKVEAIKKWPVLANVRE-------------------------- 240
            + YL H IS  G+EVDPEK+ A+K+WP  ANVRE                          
Sbjct: 878  ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 937

Query: 241  ---------WTKETQEAFNRLKQSMMTLPVLALPDFSVPFEIETDASGYGLGA------- 300
                     WT+ET+ AF +LK++MMTLPVLA+PDF++PFEIE+DASG+G+GA       
Sbjct: 938  QLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKK 997

Query: 301  ----YSHTLAMRDRVKPVYERELMAVVMAVQRWRPYLLGKKFLVKTDQRSLKFLLEQRVI 360
                +S  L+ RDR +PVYERELMAVV AVQRWRPYLLG+KF VKTDQRSLKFLLEQRVI
Sbjct: 998  PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVI 1057

Query: 361  QPQYQKWISKLLGYSFEVVYKPGLENKAAYALSRVPATVQLNQLTTSNVIDIEVIKAEVD 415
            QPQYQ+WI+KLLGYSFEV+YKPGLENKAA ALSR+  T  LNQLT   ++D+EVI+ EV 
Sbjct: 1058 QPQYQQWIAKLLGYSFEVLYKPGLENKAADALSRIGPTAHLNQLTAPALLDVEVIQKEVR 1117

BLAST of CSPI04G18860 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-15
Identity = 47/131 (35.88%), Postives = 64/131 (48.85%), Query Frame = 0

Query: 148 LNHMRAVLEVLRKNGLYANKKKCSFAQFRVDYL--EHIISGDGVEVDPEKVEAIKKWPVL 207
           +NH+  VL++  ++  YAN+KKC+F Q ++ YL   HIISG+GV  DP K+EA+  WP  
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 208 ANVRE-----------------------------------WTKETQEAFNRLKQSMMTLP 242
            N  E                                   WT+    AF  LK ++ TLP
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLP 120

BLAST of CSPI04G18860 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 6.7e-06
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 0

Query: 7  EMLASGIIRPSTSPYSSPVLLVRKKDGSW 36
          EML + II+PS SPYSSPVLLV+KKDG W
Sbjct: 51 EMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P208258.1e-6537.06Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
P043238.9e-6436.07Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
Q8I7P93.4e-6334.11Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
Q993152.1e-5733.71Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q7LHG54.8e-5733.71Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Match NameE-valueIdentityDescription
A0A5D3BSP21.8e-16361.13Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DKH51.9e-16260.61Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7SNE31.8e-16060.53Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3CXB11.2e-15961.54Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7T6B11.2e-15960.12Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
Match NameE-valueIdentityDescription
TYK02195.13.6e-16361.13Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK23779.14.0e-16260.61Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0032310.13.8e-16060.53Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK23090.12.4e-15961.54Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK15990.12.4e-15961.54Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
ATMG00860.12.1e-1535.88DNA/RNA polymerases superfamily protein [more]
ATMG00850.16.7e-0675.86DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 368..388
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..109
e-value: 4.9E-77
score: 260.0
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 8..209
coord: 210..375
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 8..209
coord: 210..375
NoneNo IPR availableCDDcd01647RT_LTRcoord: 12..184
e-value: 5.05819E-92
score: 272.932
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 242..346
e-value: 3.19547E-37
score: 129.535
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 28..180
e-value: 7.6E-29
score: 100.8
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..184
score: 15.230308
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 53..184
e-value: 4.9E-77
score: 260.0
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 255..324
e-value: 8.6E-14
score: 51.7
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..331

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G18860.1CSPI04G18860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process