CSPI04G18800 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTTCTCTACTAATTAGCCATACTTAGCCATACGGCTTCACTTTGGCTGTAAACTCCGCCTCCTCTCTCAACCGTCTCTTCCGGCACACTTAACGGGAGATTTCCCAATTTCCGACTCATGGGCGGCGATCTACGCTTCGAGATCTCTCAAAATGCTTACATCAAACTTGTTCTCCATGCCCTAAAGCACCGGACCACCGCCGTCAATGGAGTCCTTCTAGGTCGCATCTCCGGTCCCAATGACGTCATTGAAATTTCCGATTCCGTCCCTCTCTTCCACTCCAGCATCGGTCTCCTTCCTCAGCTCGAGATATCTCTCCTTCTGGTACTCCTTTGAACCATTTTACATCGGTATTTCATGTTTAGGTTTATGCAAACTGGTTGCTCGTGTGCGAATTTGTTGTGTTTGATGCCATGTTTACTCCTTTTCACTTCCTATTTGAGATCTGTGATTGATGAGGTCGTGGACATGCTTGATTTGCTATCAGATTGAAGAATACTATGCGGCTAAGGGATTGAATATTGTGGGGTACTTTCATGCCAATGAGCGATTTGATGACTATGAGGTCGGCGGTGTAGCCAAGAATATTGGTGATCATATTTCTCGATTTTTTCCACATGCTGCTCTTCTTTTGGTAAGAATTGTCCTATTGTGCTTCATCTGTACTGTTTTGTTTTGTATATTTCGTTTTGTTTGACTTATGCTCCTCTGCAGTTAGATCACAGGAAACTTGAAGCTTTGCCGAAGAGAAAGGATAGAAGCCCTGTAATGGAGGTGAGTTTATCGCTATAGAATTCTTATCATGGTTTTGTAAATTTATTTGAACGCTACATTAGAATTGCCTCAATGAATTTCCACCATATTTTCTCTTGTTCTTTTGGTTGAAAATCATTTGAAGGAGCAAAATTTTATCTCATGAACATGCCAAATTTGAATATTGTTGGTATTCAAGGACTGTGAAAAATCGTAAAGTAGCTTTGTAACATTGTGAATTCATAATTCATCCGACAATCGAGGGGATATTCTTTTTAGGTTTCCCAAATGCTGGATTTGACCTTAAACTAAAAGGTCACGAGAATGCTTTATAGTATCGTCTTCTTTAGACAATTTATCACTTCTCTTCCATTCATGGAGAGTTGAATGTTATGGCAATATCATTTATTATTGCTGATGCTCTTTGCAATTGCAATATAGGAAAACGTATGCTGGAGATTTTTACTGACTTTCTTACTCGTTATCATAGAATAGAGCCAGTGGTAGTAAGTAGTAACTAGATCTTCAAATTTATCTGGTTTTCTGAATCTGTTTCAATGTTCTCTAAATTTTGTTGGCTTGTACTGATTCTGCATTGGATTTGGGTACAGCTTGTGGGGTTTCTTTTAGGATGTGAAAGTTTGAGAGAGGCAATGGGAGTGTGATCTCTAATTTTGGTTGGAGCTGCTCCGGCGTTATTGTATTGTAGGATTTCATCAGATGCTCAGCATGGAATCTGTGGATGGGTCTAGGAGAAACTTCAATAGAATCTTTTTTACCCTATAGATGGAGAGTCATTCCACTCCTTCATTTAGTTTTCCCCCACCACGGAGAGGGCTTATGTTTTAGGTGGATTCTCCGTGGTGGGGAGGCAATGAAGTGGATTTCTTTATCTCTTTCCTTTTGGGGTCTTCTATGGACTTTCAAAATTCAACCCAGCTATCCGAAAGTGGTGGCTTGAAGCTATATGTTTTTTCTATTGTAAATCTTGTTAGGGTTTTTGGTGCAAGACAAATTTAATTGTTCGAAGTTCATTGTACAAACAAAGATTGAGAGATTGGGTGTTGGAGGAATGCATACCATCTATATTGTGGAGCGGGATAGACCTGGATGTTTATGTTCTCCTTTTATTCATTTAACTTCGCAAGTAATTTTGGATTTCGTGAATCAACCTTATTTGATCATTCCCTTCTGCATTTTCCTAAAAAGGAAAAAATGGGTTTTATCCTGTTGGAGTTTCTTGTTTTACCAGCTACCTTGGGTTGGACTAGTGACTAAGGGCCAAAGAGAGGACAAGTTTAAGTTATGGCGATCGGCCATCTTCATTAGAATTCTATGAATTTCTCTTTGGTACTTAAATGTAGCAGAGTGGTCATCTGGTGAAAGAATTTGGGTCGGAAGGGAGAATCATGGGTATCAGATTTGTTTCCAAATGGATTCCTACACTATTATATAGAATCTATGATACTTCGTTTGAGAAAAAGAATCTGTATTGGATGTTGATTTGTTCAGGTATGCTTTGGATATGTGGCTAATATGTGAATTCAGGTATCCCATATAAATTGTTTTTTTGGCTAGCATGTCCTCTCCCAGATACTTGAAGGGGACAAGCTAGATTCTTTTTTTCCCTTTAAATATTGCAACCCACCCATTAGCCCATAATTGTCCTACCCCAAAAGAAGCATAAATTATGAACAAATTAAACAAAAAATTGTAACTCCCTAGTCCCTATCTATTGCGACGTCAAGCAGACCTTCATCTTTAGAGTGATTGGATTTAGTTCATGGTGGCCTGATTTAAAATCCTATGAGTGAGTGTTACTGGGGGTTGGTGTCGTTGGAAGTTCACTTTAAGATTGGGAGTCTTCTGCGAGCTAGCATTTCTAGATTCCGATTGCTTCTCGTTCCAATTGCCTTTTATCACCTTAGCATAGCTATTTTACCCTTTCTAATATTCAAATTGATTCCGAGATGACCTGTATAAGGTTTCTTTGGAATCGTTTAGTTTAATCAAGATGTGATTGCATTTTATGAATAACTCCAGTTTACAATTAACACTATCTGATTATCATAGCTGTTTTGTGCTGCATTCAACTTATGCATCCTGACTGAACCGGATGTCTTGTAATCTAGGAATACTTGTAAACTATAGGCCTTGTCTACGTTGTTAGTTTCATCTTGAAATATGGTAGAGACTAAGCATGAGGAGATGGTCTCATTAATGCTCTTCTCATTCATTTTGTTCGTTTTGTCTCCTACCAGCTATACACAAAGGAAACTTCCAAGAACTGGAAGTTGGCTGGATCAGATGGAAGCAGCCAGCTGATGATGAAGGAACCTTCAGCAAACGTGGTCTTGTTGGATTTCATATCATCTGAAAAATGGCAAGATGTGGTGGACTTCGATGATCACCTTGACGACATTAGCAAGTACAACACACAATCCCCCTTCCCTTTTTCAATCATGAATGAATTTAAAAGTTAAAGCTTTGTTTTAAACTTCAAAATTTTGCAGGGATTGGTTGAATCCAGACCTCTTCAAGTAAAGATCTTTTAGAAGAGATTGGTTGGAAAATGGAGCCTTGTGCTTTTCAATGATTGAGAATATTGTTAGATGCACATTACTATTAGGTAATGGTCAAATTTTATCTCATTGGACTTTGATTAGCTTTCTTTGATTCGAGATACCGAAGTTCTCGGTCTTGAAGAACTTTTGAGTTCAAGGCGAATGTTTATGGAGTTCATTTGGATGATGTACACTAACACAACTTCTCATTCTTTGAATGGGAAAGACAAACACTACCATGCATTGAGGATCAGTTTATTGGTTGAGAATGGCTTTGAAGATTATTCAAAATGAAAATTTTAGGAGAGAAGCACCATTCCTTGTATTGTTTTCCTTAAAAAGAAATTAACTTTTATGTAATTACTTTAAGGATTAATTCT CACTTCTCTACTAATTAGCCATACTTAGCCATACGGCTTCACTTTGGCTGTAAACTCCGCCTCCTCTCTCAACCGTCTCTTCCGGCACACTTAACGGGAGATTTCCCAATTTCCGACTCATGGGCGGCGATCTACGCTTCGAGATCTCTCAAAATGCTTACATCAAACTTGTTCTCCATGCCCTAAAGCACCGGACCACCGCCGTCAATGGAGTCCTTCTAGGTCGCATCTCCGGTCCCAATGACGTCATTGAAATTTCCGATTCCGTCCCTCTCTTCCACTCCAGCATCGGTCTCCTTCCTCAGCTCGAGATATCTCTCCTTCTGATTGAAGAATACTATGCGGCTAAGGGATTGAATATTGTGGGGTACTTTCATGCCAATGAGCGATTTGATGACTATGAGGTCGGCGGTGTAGCCAAGAATATTGGTGATCATATTTCTCGATTTTTTCCACATGCTGCTCTTCTTTTGTTAGATCACAGGAAACTTGAAGCTTTGCCGAAGAGAAAGGATAGAAGCCCTGTAATGGAGCTATACACAAAGGAAACTTCCAAGAACTGGAAGTTGGCTGGATCAGATGGAAGCAGCCAGCTGATGATGAAGGAACCTTCAGCAAACGTGGTCTTGTTGGATTTCATATCATCTGAAAAATGGCAAGATGTGGTGGACTTCGATGATCACCTTGACGACATTAGCAAGGATTGGTTGAATCCAGACCTCTTCAAGTAAAGATCTTTTAGAAGAGATTGGTTGGAAAATGGAGCCTTGTGCTTTTCAATGATTGAGAATATTGTTAGATGCACATTACTATTAGGTAATGGTCAAATTTTATCTCATTGGACTTTGATTAGCTTTCTTTGATTCGAGATACCGAAGTTCTCGGTCTTGAAGAACTTTTGAGTTCAAGGCGAATGTTTATGGAGTTCATTTGGATGATGTACACTAACACAACTTCTCATTCTTTGAATGGGAAAGACAAACACTACCATGCATTGAGGATCAGTTTATTGGTTGAGAATGGCTTTGAAGATTATTCAAAATGAAAATTTTAGGAGAGAAGCACCATTCCTTGTATTGTTTTCCTTAAAAAGAAATTAACTTTTATGTAATTACTTTAAGGATTAATTCT ATGGGCGGCGATCTACGCTTCGAGATCTCTCAAAATGCTTACATCAAACTTGTTCTCCATGCCCTAAAGCACCGGACCACCGCCGTCAATGGAGTCCTTCTAGGTCGCATCTCCGGTCCCAATGACGTCATTGAAATTTCCGATTCCGTCCCTCTCTTCCACTCCAGCATCGGTCTCCTTCCTCAGCTCGAGATATCTCTCCTTCTGATTGAAGAATACTATGCGGCTAAGGGATTGAATATTGTGGGGTACTTTCATGCCAATGAGCGATTTGATGACTATGAGGTCGGCGGTGTAGCCAAGAATATTGGTGATCATATTTCTCGATTTTTTCCACATGCTGCTCTTCTTTTGTTAGATCACAGGAAACTTGAAGCTTTGCCGAAGAGAAAGGATAGAAGCCCTGTAATGGAGCTATACACAAAGGAAACTTCCAAGAACTGGAAGTTGGCTGGATCAGATGGAAGCAGCCAGCTGATGATGAAGGAACCTTCAGCAAACGTGGTCTTGTTGGATTTCATATCATCTGAAAAATGGCAAGATGTGGTGGACTTCGATGATCACCTTGACGACATTAGCAAGGATTGGTTGAATCCAGACCTCTTCAAGTAA MGGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLLPQLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDHRKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQDVVDFDDHLDDISKDWLNPDLFK* Homology
BLAST of CSPI04G18800 vs. ExPASy Swiss-Prot
Match: Q9FG71 (ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana OX=3702 GN=EMB2731 PE=2 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 4.0e-81 Identity = 144/201 (71.64%), Postives = 179/201 (89.05%), Query Frame = 0
BLAST of CSPI04G18800 vs. ExPASy Swiss-Prot
Match: Q9DB76 (ER membrane protein complex subunit 9 OS=Mus musculus OX=10090 GN=Emc9 PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 5.3e-25 Identity = 69/194 (35.57%), Postives = 105/194 (54.12%), Query Frame = 0
BLAST of CSPI04G18800 vs. ExPASy Swiss-Prot
Match: Q5U1W7 (ER membrane protein complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Emc9 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.6e-24 Identity = 67/194 (34.54%), Postives = 104/194 (53.61%), Query Frame = 0
BLAST of CSPI04G18800 vs. ExPASy Swiss-Prot
Match: Q9Y3B6 (ER membrane protein complex subunit 9 OS=Homo sapiens OX=9606 GN=EMC9 PE=1 SV=3) HSP 1 Score: 110.2 bits (274), Expect = 2.9e-23 Identity = 66/194 (34.02%), Postives = 103/194 (53.09%), Query Frame = 0
BLAST of CSPI04G18800 vs. ExPASy Swiss-Prot
Match: Q5FVL2 (ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.4e-22 Identity = 64/205 (31.22%), Postives = 103/205 (50.24%), Query Frame = 0
BLAST of CSPI04G18800 vs. ExPASy TrEMBL
Match: A0A0A0KYR9 (MPN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G419600 PE=3 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.4e-110 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of CSPI04G18800 vs. ExPASy TrEMBL
Match: A0A5A7SKW9 (ER membrane protein complex subunit 8/9-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00760 PE=3 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 3.6e-109 Identity = 200/203 (98.52%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of CSPI04G18800 vs. ExPASy TrEMBL
Match: A0A1S3C2C1 (ER membrane protein complex subunit 8/9 homolog OS=Cucumis melo OX=3656 GN=LOC103495860 PE=3 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 3.6e-109 Identity = 200/203 (98.52%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of CSPI04G18800 vs. ExPASy TrEMBL
Match: A0A6J1GG75 (ER membrane protein complex subunit 8/9 homolog OS=Cucurbita moschata OX=3662 GN=LOC111453869 PE=3 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 4.1e-105 Identity = 191/203 (94.09%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of CSPI04G18800 vs. ExPASy TrEMBL
Match: A0A6J1HRP6 (ER membrane protein complex subunit 8/9 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466107 PE=3 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103 Identity = 191/203 (94.09%), Postives = 198/203 (97.54%), Query Frame = 0
BLAST of CSPI04G18800 vs. NCBI nr
Match: XP_004144311.1 (ER membrane protein complex subunit 8/9 homolog [Cucumis sativus] >KGN54668.1 hypothetical protein Csa_012212 [Cucumis sativus]) HSP 1 Score: 408.7 bits (1049), Expect = 3.0e-110 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of CSPI04G18800 vs. NCBI nr
Match: XP_008455761.1 (PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis melo] >KAA0025782.1 ER membrane protein complex subunit 8/9-like protein [Cucumis melo var. makuwa] >TYK09673.1 ER membrane protein complex subunit 8/9-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 404.1 bits (1037), Expect = 7.4e-109 Identity = 200/203 (98.52%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of CSPI04G18800 vs. NCBI nr
Match: XP_038880935.1 (ER membrane protein complex subunit 8/9 homolog [Benincasa hispida]) HSP 1 Score: 399.4 bits (1025), Expect = 1.8e-107 Identity = 198/203 (97.54%), Postives = 200/203 (98.52%), Query Frame = 0
BLAST of CSPI04G18800 vs. NCBI nr
Match: XP_022950917.1 (ER membrane protein complex subunit 8/9 homolog [Cucurbita moschata]) HSP 1 Score: 390.6 bits (1002), Expect = 8.4e-105 Identity = 191/203 (94.09%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of CSPI04G18800 vs. NCBI nr
Match: KAG6603425.1 (ER membrane protein complex subunit 8/9-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-104 Identity = 190/203 (93.60%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of CSPI04G18800 vs. TAIR 10
Match: AT5G55940.1 (Uncharacterised protein family (UPF0172) ) HSP 1 Score: 302.4 bits (773), Expect = 2.8e-82 Identity = 144/201 (71.64%), Postives = 179/201 (89.05%), Query Frame = 0
BLAST of CSPI04G18800 vs. TAIR 10
Match: AT5G51620.3 (Uncharacterised protein family (UPF0172) ) HSP 1 Score: 84.7 bits (208), Expect = 9.2e-17 Identity = 38/50 (76.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of CSPI04G18800 vs. TAIR 10
Match: AT5G51620.2 (Uncharacterised protein family (UPF0172) ) HSP 1 Score: 63.2 bits (152), Expect = 2.9e-10 Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0
BLAST of CSPI04G18800 vs. TAIR 10
Match: AT5G51620.1 (Uncharacterised protein family (UPF0172) ) HSP 1 Score: 63.2 bits (152), Expect = 2.9e-10 Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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