CSPI04G18390 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAAGCAGAGGAATACGACACTTCAACTCGAGGACATCGCCATATTTCTGCGGCAAGAGCATTGGGGGAAGGCATTTACCGTATTCTAAGGCATAATCCAAGGAACAAAAACAATAATCACCACACTCATTTGATCTACAAGCTACAGTTTCCAGCGGCAGACGAGAAAAACGAGCCTCAGAAATCCTTTAATATTGAAAGGGAAGGGTCATTTGTTATACAAATAAAGAACCCAGAGCAAGGAGGCGCAGGTGGTTCGTCTTCTCAGCATAAACGCAGGGCTCAGTTTCCAGCGCATTTGCAAGGTCAATTTGGGCATAAACGGTATTACCCGGCCGACCCGCCTGAGTTCTTGAATTTTGAAGGGTGTGAGTTCTTGTTGATATCGGCTTCTGATGATATAGAACAGGAATTGGGGTTGGAGTTGATTACTGAAGGAGAAGAATGTGATTTAGTGAAGACTTTTGGAGATGCTGTTTCCACGAAGCCTCTTTTCGAAGGTACTTGGGTGTAG ATGGCAAAAGCAGAGGAATACGACACTTCAACTCGAGGACATCGCCATATTTCTGCGGCAAGAGCATTGGGGGAAGGCATTTACCGTATTCTAAGGCATAATCCAAGGAACAAAAACAATAATCACCACACTCATTTGATCTACAAGCTACAGTTTCCAGCGGCAGACGAGAAAAACGAGCCTCAGAAATCCTTTAATATTGAAAGGGAAGGGTCATTTGTTATACAAATAAAGAACCCAGAGCAAGGAGGCGCAGGTGGTTCGTCTTCTCAGCATAAACGCAGGGCTCAGTTTCCAGCGCATTTGCAAGGTCAATTTGGGCATAAACGGTATTACCCGGCCGACCCGCCTGAGTTCTTGAATTTTGAAGGGTGTGAGTTCTTGTTGATATCGGCTTCTGATGATATAGAACAGGAATTGGGGTTGGAGTTGATTACTGAAGGAGAAGAATGTGATTTAGTGAAGACTTTTGGAGATGCTGTTTCCACGAAGCCTCTTTTCGAAGGTACTTGGGTGTAG ATGGCAAAAGCAGAGGAATACGACACTTCAACTCGAGGACATCGCCATATTTCTGCGGCAAGAGCATTGGGGGAAGGCATTTACCGTATTCTAAGGCATAATCCAAGGAACAAAAACAATAATCACCACACTCATTTGATCTACAAGCTACAGTTTCCAGCGGCAGACGAGAAAAACGAGCCTCAGAAATCCTTTAATATTGAAAGGGAAGGGTCATTTGTTATACAAATAAAGAACCCAGAGCAAGGAGGCGCAGGTGGTTCGTCTTCTCAGCATAAACGCAGGGCTCAGTTTCCAGCGCATTTGCAAGGTCAATTTGGGCATAAACGGTATTACCCGGCCGACCCGCCTGAGTTCTTGAATTTTGAAGGGTGTGAGTTCTTGTTGATATCGGCTTCTGATGATATAGAACAGGAATTGGGGTTGGAGTTGATTACTGAAGGAGAAGAATGTGATTTAGTGAAGACTTTTGGAGATGCTGTTTCCACGAAGCCTCTTTTCGAAGGTACTTGGGTGTAG MAKAEEYDTSTRGHRHISAARALGEGIYRILRHNPRNKNNNHHTHLIYKLQFPAADEKNEPQKSFNIEREGSFVIQIKNPEQGGAGGSSSQHKRRAQFPAHLQGQFGHKRYYPADPPEFLNFEGCEFLLISASDDIEQELGLELITEGEECDLVKTFGDAVSTKPLFEGTWV* Homology
BLAST of CSPI04G18390 vs. ExPASy TrEMBL
Match: A0A0A0L203 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G385780 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.6e-94 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CSPI04G18390 vs. ExPASy TrEMBL
Match: A0A5D3BUL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00100 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88 Identity = 163/170 (95.88%), Postives = 166/170 (97.65%), Query Frame = 0
BLAST of CSPI04G18390 vs. ExPASy TrEMBL
Match: A0A1S3B9M2 (uncharacterized protein LOC103487535 OS=Cucumis melo OX=3656 GN=LOC103487535 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88 Identity = 163/170 (95.88%), Postives = 166/170 (97.65%), Query Frame = 0
BLAST of CSPI04G18390 vs. ExPASy TrEMBL
Match: A0A6J1GWN3 (uncharacterized protein LOC111457833 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457833 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62 Identity = 120/170 (70.59%), Postives = 143/170 (84.12%), Query Frame = 0
BLAST of CSPI04G18390 vs. ExPASy TrEMBL
Match: A0A6J1GXU8 (uncharacterized protein LOC111457833 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457833 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62 Identity = 120/170 (70.59%), Postives = 143/170 (84.12%), Query Frame = 0
BLAST of CSPI04G18390 vs. NCBI nr
Match: XP_031740485.1 (uncharacterized protein LOC101213393 [Cucumis sativus] >KAE8649641.1 hypothetical protein Csa_012091 [Cucumis sativus]) HSP 1 Score: 348.6 bits (893), Expect = 3.1e-92 Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0
BLAST of CSPI04G18390 vs. NCBI nr
Match: XP_008444096.1 (PREDICTED: uncharacterized protein LOC103487535 [Cucumis melo] >KAA0064208.1 uncharacterized protein E6C27_scaffold548G001530 [Cucumis melo var. makuwa] >TYK02820.1 uncharacterized protein E5676_scaffold218G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 334.0 bits (855), Expect = 7.9e-88 Identity = 163/170 (95.88%), Postives = 166/170 (97.65%), Query Frame = 0
BLAST of CSPI04G18390 vs. NCBI nr
Match: XP_038895444.1 (uncharacterized protein LOC120083676 [Benincasa hispida]) HSP 1 Score: 292.4 bits (747), Expect = 2.6e-75 Identity = 142/167 (85.03%), Postives = 154/167 (92.22%), Query Frame = 0
BLAST of CSPI04G18390 vs. NCBI nr
Match: KAG6581755.1 (hypothetical protein SDJN03_21757, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 251.1 bits (640), Expect = 6.8e-63 Identity = 121/170 (71.18%), Postives = 144/170 (84.71%), Query Frame = 0
BLAST of CSPI04G18390 vs. NCBI nr
Match: XP_022956010.1 (uncharacterized protein LOC111457833 isoform X2 [Cucurbita moschata]) HSP 1 Score: 248.8 bits (634), Expect = 3.4e-62 Identity = 120/170 (70.59%), Postives = 143/170 (84.12%), Query Frame = 0
BLAST of CSPI04G18390 vs. TAIR 10
Match: AT1G16770.1 (unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 71; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 225.7 bits (574), Expect = 2.8e-59 Identity = 113/178 (63.48%), Postives = 133/178 (74.72%), Query Frame = 0
BLAST of CSPI04G18390 vs. TAIR 10
Match: AT1G16770.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 103 Blast hits to 103 proteins in 50 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 65; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 225.7 bits (574), Expect = 2.8e-59 Identity = 113/178 (63.48%), Postives = 133/178 (74.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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