CSPI04G17500 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G17500
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Conserved oligomeric Golgi complex subunit 6
Location	Chr4: 15019515 .. 15020282 (+)
RNA-Seq Expression	CSPI04G17500
Synteny	CSPI04G17500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGAGCAAGCAACAGAAATTCGCAAGTCTAAGGGATCTGGCCTCATATCAAGAAGGGGTAGGACGACTTCTGGTTCCGGTCAGAATAGCAAATCATCAGTAGATGCACTATTGTCCCAAAGCAGCCCTGCTCTAGCCTCTCAGGTTGGCATGACCATCTTTTCCTGTCTTTCAATGGGGTATGCATAATTATAACTTGTTTTCAATCTGAAAAAACTTCGGTATCCTATCGCCTGAGCGCAGAACATTGAAACACCTTCAAAGATCTTTCTGATCAACTGTCTATGTGCCATCCAACAGCCATTATCTGGCCACGAGGTTGCAGCTGAATATGTCAAGAAACTTGAAGTAATGATAAATTAGTCACATGAGTGTGCTTGTTGAAAAGGAAGTTGATGCAATCTTATGAAGGTGCGGCTTATCTCAAAAGATGACGTATTTCCATAAAATCTCACAAACAGGCAATGCAACGGGATGGACCGAGATTCAAGACACATCTCTCCCGCTTCACTTTCAGAGAGCTTGAAAGCTTTCTTTGGGCATGTTTTGGGAAGTGAGAGTTTCCTTCCTAAGTTTGAGCTATTACAGGTTCCTAAACTGCGAACGGAAGCCTGTGTTCAAGTGGCTCGATCACTCTCTGAAGCTGACAAACTTATATACGACACAATCATGGATCCAAACAACAGGTACCCAGACCCCACTGCGTGCAAGGCATCCTCCAAACCAGATAAGAACGATTTTGGGAATATAACTATAGAGATTTAA

mRNA sequence

ATGTGTGAGCAAGCAACAGAAATTCGCAAGTCTAAGGGATCTGGCCTCATATCAAGAAGGGGTAGGACGACTTCTGGTTCCGGTCAGAATAGCAAATCATCAGTAGATGCACTATTGTCCCAAAGCAGCCCTGCTCTAGCCTCTCAGAACATTGAAACACCTTCAAAGATCTTTCTGATCAACTGTCTATGTGCCATCCAACAGCCATTATCTGGCCACGAGGTTGCAGCTGAATATGTCAAGAAACTTGAAAGCTTGAAAGCTTTCTTTGGGCATGTTTTGGGAAGTGAGAGTTTCCTTCCTAAGTTTGAGCTATTACAGGTTCCTAAACTGCGAACGGAAGCCTGTGTTCAAGTGGCTCGATCACTCTCTGAAGCTGACAAACTTATATACGACACAATCATGGATCCAAACAACAGGTACCCAGACCCCACTGCGTGCAAGGCATCCTCCAAACCAGATAAGAACGATTTTGGGAATATAACTATAGAGATTTAA

Coding sequence (CDS)

ATGTGTGAGCAAGCAACAGAAATTCGCAAGTCTAAGGGATCTGGCCTCATATCAAGAAGGGGTAGGACGACTTCTGGTTCCGGTCAGAATAGCAAATCATCAGTAGATGCACTATTGTCCCAAAGCAGCCCTGCTCTAGCCTCTCAGAACATTGAAACACCTTCAAAGATCTTTCTGATCAACTGTCTATGTGCCATCCAACAGCCATTATCTGGCCACGAGGTTGCAGCTGAATATGTCAAGAAACTTGAAAGCTTGAAAGCTTTCTTTGGGCATGTTTTGGGAAGTGAGAGTTTCCTTCCTAAGTTTGAGCTATTACAGGTTCCTAAACTGCGAACGGAAGCCTGTGTTCAAGTGGCTCGATCACTCTCTGAAGCTGACAAACTTATATACGACACAATCATGGATCCAAACAACAGGTACCCAGACCCCACTGCGTGCAAGGCATCCTCCAAACCAGATAAGAACGATTTTGGGAATATAACTATAGAGATTTAA

Protein sequence

MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVARSLSEADKLIYDTIMDPNNRYPDPTACKASSKPDKNDFGNITIEI*

Homology

[Close]

BLAST of CSPI04G17500 vs. ExPASy Swiss-Prot
Match: Q6NMI3 (Conserved oligomeric Golgi complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=COG6 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.3e-33
Identity = 96/208 (46.15%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQA E  KSK SG + RR RT+S S Q   +SVDALLS SSP+   QN ETPSKIFLI
Sbjct: 471 MCEQAAEAHKSKKSGQLPRRSRTSSDSSQ--LTSVDALLS-SSPS-PPQNNETPSKIFLI 530

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL------------------------------------- 120
           NCLCAIQQPL  H+VA++YV  +                                     
Sbjct: 531 NCLCAIQQPLLRHDVASQYVTNIGLMIENHINLLVQNEVDTLLHKCGLSDKMQIFRSSTS 590

Query: 121 ----------------ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVARSLSEAD 156
                           E LKAFFG VLGSE  LP+FE +QVPKLR+EACV+VA++L+EA 
Sbjct: 591 ELPLSERQDTSPAMLSECLKAFFGLVLGSEGSLPEFEQIQVPKLRSEACVRVAKTLAEAY 650

[Close]

BLAST of CSPI04G17500 vs. ExPASy TrEMBL
Match: A0A5A7UEV6 (Conserved oligomeric Golgi complex subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00300 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.2e-50
Identity = 123/203 (60.59%), Postives = 129/203 (63.55%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQA EI KSKGS  ISRRGRT SGS QNSKSSVDALLSQS PA ASQ+ ETPSKIFLI
Sbjct: 475 MCEQAAEIHKSKGSSHISRRGRTNSGSSQNSKSSVDALLSQSGPAPASQDTETPSKIFLI 534

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL------------------------------------- 120
           NCLCAIQQPLSGHEVAAEYVKKL                                     
Sbjct: 535 NCLCAIQQPLSGHEVAAEYVKKLGVMINSHLSVLVEKEVAAILRRCDLSQKMTYFHKSLE 594

Query: 121 ----------------------ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVAR 145
                                 ESLKAFFG  LGSES LP+FELLQVPKLR+EAC+QVAR
Sbjct: 595 AGNAADGLRLAEIQDTSPASLSESLKAFFGLALGSESSLPEFELLQVPKLRSEACIQVAR 654

[Close]

BLAST of CSPI04G17500 vs. ExPASy TrEMBL
Match: A0A1S3BAN8 (Conserved oligomeric Golgi complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103487619 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.2e-50
Identity = 123/203 (60.59%), Postives = 129/203 (63.55%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQA EI KSKGS  ISRRGRT SGS QNSKSSVDALLSQS PA ASQ+ ETPSKIFLI
Sbjct: 475 MCEQAAEIHKSKGSSHISRRGRTNSGSSQNSKSSVDALLSQSGPAPASQDTETPSKIFLI 534

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL------------------------------------- 120
           NCLCAIQQPLSGHEVAAEYVKKL                                     
Sbjct: 535 NCLCAIQQPLSGHEVAAEYVKKLGVMINSHLSVLVEKEVAAILRRCDLSQKMTYFHKSLE 594

Query: 121 ----------------------ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVAR 145
                                 ESLKAFFG  LGSES LP+FELLQVPKLR+EAC+QVAR
Sbjct: 595 AGNAADGLRLAEIQDTSPASLSESLKAFFGLALGSESSLPEFELLQVPKLRSEACIQVAR 654

[Close]

BLAST of CSPI04G17500 vs. ExPASy TrEMBL
Match: A0A0A0L1U3 (Conserved oligomeric Golgi complex subunit 6 OS=Cucumis sativus OX=3659 GN=Csa_4G358700 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 7.5e-49
Identity = 121/203 (59.61%), Postives = 128/203 (63.05%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQA EI KSKGS  ISRRGRT SGS QNSKSSVDALLSQSSPA A+Q+ ETPSKIFLI
Sbjct: 475 MCEQAAEIHKSKGSSHISRRGRTNSGSSQNSKSSVDALLSQSSPAPAAQDTETPSKIFLI 534

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL------------------------------------- 120
           NCLCAIQQPLS HEVAAEYV KL                                     
Sbjct: 535 NCLCAIQQPLSSHEVAAEYVNKLGVMINSHLSVLVEKEVAAILRRCDLSQKMTYFHKSSE 594

Query: 121 ----------------------ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVAR 145
                                 ESLKAFFG  LGSES LP+FELLQVPKLR+EAC+QVAR
Sbjct: 595 AGNAADGLRLAEIQDTSPASLSESLKAFFGLALGSESSLPEFELLQVPKLRSEACIQVAR 654

[Close]

BLAST of CSPI04G17500 vs. ExPASy TrEMBL
Match: A0A6J1C0T5 (Conserved oligomeric Golgi complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111007409 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 6.4e-48
Identity = 122/214 (57.01%), Postives = 134/214 (62.62%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQA E  KSKG+G ISRRGRT S S QNSKSSVDALLSQSSPA ASQ+ ETPSKIFLI
Sbjct: 475 MCEQAAEAHKSKGAGHISRRGRTNSDSSQNSKSSVDALLSQSSPAPASQDTETPSKIFLI 534

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL------------------------------------- 120
           NCLCAIQQPLSGHEVA+EYVKKL                                     
Sbjct: 535 NCLCAIQQPLSGHEVASEYVKKLGGMIINHLSVLVEKEVDAILRRCGLSQKMTYFRRSSE 594

Query: 121 ----------------------ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVAR 156
                                 ESLKAFFG VLGSES LP+FELLQVPKLR+EAC+QVAR
Sbjct: 595 AGDAANGLPLAEIEDTSPASLSESLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVAR 654

[Close]

BLAST of CSPI04G17500 vs. ExPASy TrEMBL
Match: A0A6J1IV23 (Conserved oligomeric Golgi complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111480248 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.2e-47
Identity = 119/208 (57.21%), Postives = 132/208 (63.46%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQA E  KSKG+G ISRRGR  + S QNSKSSVDALLSQSSPA ASQ+ ETPSKIFLI
Sbjct: 475 MCEQAAEAHKSKGAGHISRRGRMNTDSSQNSKSSVDALLSQSSPAPASQDTETPSKIFLI 534

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL------------------------------------- 120
           NCL AIQQP+SGHEVAAEYVKKL                                     
Sbjct: 535 NCLSAIQQPISGHEVAAEYVKKLGVMINNHLSVLVEKEVDAILRRCGLSGKMTYFHKSSD 594

Query: 121 ----------------ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVARSLSEAD 156
                           E+LKAFFG VLGSES LP+FELLQVPKLR+EAC+QVARSL+E  
Sbjct: 595 GLPLADNQHTSPASLSENLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVARSLAEGY 654

[Close]

BLAST of CSPI04G17500 vs. NCBI nr
Match: KAE8649614.1 (hypothetical protein Csa_012223 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 2.0e-59
Identity = 134/168 (79.76%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQ   T     + 
Sbjct: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQVGMT-----IF 60

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL---ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACV 120
           +CL   Q   +G +  + ++      ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACV
Sbjct: 61  SCLSMGQ--CNGMDRDSRHISPASLSESLKAFFGHVLGSESFLPKFELLQVPKLRTEACV 120

Query: 121 QVARSLSEADKLIYDTIMDPNNRYPDPTACKASSKPDKNDFGNITIEI 166
           QVARSLSEADKLIY+TIMDPNNRYPDPTACKASSKPDK DFGNITIEI
Sbjct: 121 QVARSLSEADKLIYNTIMDPNNRYPDPTACKASSKPDKKDFGNITIEI 161

[Close]

BLAST of CSPI04G17500 vs. NCBI nr
Match: XP_038899282.1 (conserved oligomeric Golgi complex subunit 6 [Benincasa hispida])

HSP 1 Score: 213.0 bits (541), Expect = 2.0e-51
Identity = 126/203 (62.07%), Postives = 133/203 (65.52%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQA EI KSKGSG ISRRGRT SGSGQNSKSSVDALLSQSSPA ASQ+ ETPSKIFLI
Sbjct: 475 MCEQAAEIHKSKGSGHISRRGRTNSGSGQNSKSSVDALLSQSSPAPASQDTETPSKIFLI 534

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL------------------------------------- 120
           NCLCAIQQPLSGHEVAAEYVKKL                                     
Sbjct: 535 NCLCAIQQPLSGHEVAAEYVKKLGVIINSHLSVLVEKEVGAILRRCDLSQKMTYFHKSSE 594

Query: 121 ----------------------ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVAR 145
                                 ESLKAFFG VLGSES LP+FELLQVPKLR+EAC+QVAR
Sbjct: 595 AGNAADGLRLAEIQDTSPASLSESLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVAR 654

[Close]

BLAST of CSPI04G17500 vs. NCBI nr
Match: XP_008444218.2 (PREDICTED: conserved oligomeric Golgi complex subunit 6 [Cucumis melo] >KAA0052235.1 conserved oligomeric Golgi complex subunit 6 [Cucumis melo var. makuwa] >TYK01798.1 conserved oligomeric Golgi complex subunit 6 [Cucumis melo var. makuwa])

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49
Identity = 123/203 (60.59%), Postives = 129/203 (63.55%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQA EI KSKGS  ISRRGRT SGS QNSKSSVDALLSQS PA ASQ+ ETPSKIFLI
Sbjct: 475 MCEQAAEIHKSKGSSHISRRGRTNSGSSQNSKSSVDALLSQSGPAPASQDTETPSKIFLI 534

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL------------------------------------- 120
           NCLCAIQQPLSGHEVAAEYVKKL                                     
Sbjct: 535 NCLCAIQQPLSGHEVAAEYVKKLGVMINSHLSVLVEKEVAAILRRCDLSQKMTYFHKSLE 594

Query: 121 ----------------------ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVAR 145
                                 ESLKAFFG  LGSES LP+FELLQVPKLR+EAC+QVAR
Sbjct: 595 AGNAADGLRLAEIQDTSPASLSESLKAFFGLALGSESSLPEFELLQVPKLRSEACIQVAR 654

[Close]

BLAST of CSPI04G17500 vs. NCBI nr
Match: XP_004142643.1 (conserved oligomeric Golgi complex subunit 6 [Cucumis sativus] >KGN54532.1 hypothetical protein Csa_012197 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 1.6e-48
Identity = 121/203 (59.61%), Postives = 128/203 (63.05%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQA EI KSKGS  ISRRGRT SGS QNSKSSVDALLSQSSPA A+Q+ ETPSKIFLI
Sbjct: 475 MCEQAAEIHKSKGSSHISRRGRTNSGSSQNSKSSVDALLSQSSPAPAAQDTETPSKIFLI 534

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL------------------------------------- 120
           NCLCAIQQPLS HEVAAEYV KL                                     
Sbjct: 535 NCLCAIQQPLSSHEVAAEYVNKLGVMINSHLSVLVEKEVAAILRRCDLSQKMTYFHKSSE 594

Query: 121 ----------------------ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVAR 145
                                 ESLKAFFG  LGSES LP+FELLQVPKLR+EAC+QVAR
Sbjct: 595 AGNAADGLRLAEIQDTSPASLSESLKAFFGLALGSESSLPEFELLQVPKLRSEACIQVAR 654

[Close]

BLAST of CSPI04G17500 vs. NCBI nr
Match: XP_022135456.1 (conserved oligomeric Golgi complex subunit 6 [Momordica charantia])

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-47
Identity = 122/214 (57.01%), Postives = 134/214 (62.62%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQA E  KSKG+G ISRRGRT S S QNSKSSVDALLSQSSPA ASQ+ ETPSKIFLI
Sbjct: 475 MCEQAAEAHKSKGAGHISRRGRTNSDSSQNSKSSVDALLSQSSPAPASQDTETPSKIFLI 534

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL------------------------------------- 120
           NCLCAIQQPLSGHEVA+EYVKKL                                     
Sbjct: 535 NCLCAIQQPLSGHEVASEYVKKLGGMIINHLSVLVEKEVDAILRRCGLSQKMTYFRRSSE 594

Query: 121 ----------------------ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVAR 156
                                 ESLKAFFG VLGSES LP+FELLQVPKLR+EAC+QVAR
Sbjct: 595 AGDAANGLPLAEIEDTSPASLSESLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVAR 654

[Close]

BLAST of CSPI04G17500 vs. TAIR 10
Match: AT1G31780.1 (CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 384 Blast hits to 379 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). )

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-34
Identity = 96/208 (46.15%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLI 60
           MCEQA E  KSK SG + RR RT+S S Q   +SVDALLS SSP+   QN ETPSKIFLI
Sbjct: 471 MCEQAAEAHKSKKSGQLPRRSRTSSDSSQ--LTSVDALLS-SSPS-PPQNNETPSKIFLI 530

Query: 61  NCLCAIQQPLSGHEVAAEYVKKL------------------------------------- 120
           NCLCAIQQPL  H+VA++YV  +                                     
Sbjct: 531 NCLCAIQQPLLRHDVASQYVTNIGLMIENHINLLVQNEVDTLLHKCGLSDKMQIFRSSTS 590

Query: 121 ----------------ESLKAFFGHVLGSESFLPKFELLQVPKLRTEACVQVARSLSEAD 156
                           E LKAFFG VLGSE  LP+FE +QVPKLR+EACV+VA++L+EA 
Sbjct: 591 ELPLSERQDTSPAMLSECLKAFFGLVLGSEGSLPEFEQIQVPKLRSEACVRVAKTLAEAY 650

The following BLAST results are available for this feature:

BLAST of CSPI04G17500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NMI3	3.3e-33	46.15	Conserved oligomeric Golgi complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CSPI04G17500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UEV6	5.2e-50	60.59	Conserved oligomeric Golgi complex subunit 6 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3BAN8	5.2e-50	60.59	Conserved oligomeric Golgi complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A0A0L1U3	7.5e-49	59.61	Conserved oligomeric Golgi complex subunit 6 OS=Cucumis sativus OX=3659 GN=Csa_4...	[more]
A0A6J1C0T5	6.4e-48	57.01	Conserved oligomeric Golgi complex subunit 6 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1IV23	3.2e-47	57.21	Conserved oligomeric Golgi complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of CSPI04G17500 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649614.1	2.0e-59	79.76	hypothetical protein Csa_012223 [Cucumis sativus]	[more]
XP_038899282.1	2.0e-51	62.07	conserved oligomeric Golgi complex subunit 6 [Benincasa hispida]	[more]
XP_008444218.2	1.1e-49	60.59	PREDICTED: conserved oligomeric Golgi complex subunit 6 [Cucumis melo] >KAA00522...	[more]
XP_004142643.1	1.6e-48	59.61	conserved oligomeric Golgi complex subunit 6 [Cucumis sativus] >KGN54532.1 hypot...	[more]
XP_022135456.1	1.3e-47	57.01	conserved oligomeric Golgi complex subunit 6 [Momordica charantia]	[more]

BLAST of CSPI04G17500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31780.1	2.3e-34	46.15	CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR01049...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..34
IPR010490	Conserved oligomeric Golgi complex subunit 6	PANTHER	PTHR21506	COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6	coord: 84..153 coord: 35..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G17500.1	CSPI04G17500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
cellular_component	GO:0017119	Golgi transport complex