CSPI04G17270 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G17270
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein FATTY ACID EXPORT 1, chloroplastic
Location	Chr4: 14796648 .. 14798616 (-)
RNA-Seq Expression	CSPI04G17270
Synteny	CSPI04G17270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTACTCTTTCTGGTAGGCATGGAGCTTCACAGGAGCGAAAACTAAATATCACTTGCCAAACTGTCAATTAGATATGTTCTCCACTAAACAACCTTTTGAAAGCTGCATCTGCTTCCTTTTGTTTCACCTGGGCGTTTAGCTGCTGGGTGTTAGTGAACTTATTGGCGTCAAAGCTAAAGTTTACGGGAGGGAGGAGTACAAATGGAAATGTAACATTTGCACGTAATTATAGCAGATGTGTGATTTTTTTAAAGTTTAAGAAACTAGATCCCATTCTGTTCTGTTTTGATGAAATGTAGAGAAATACGAGCGACTTTAATGTGTTCTCTCTCTCTCTCTCTCTCTTTATTTATTATTATTATTTTTTTAATGTATGAGATGATATTAAATTAGAGGGTTCAAATGAGGAAAAATGGATGAAGTTCAGAAAAGTTTCTTCCTGTGTAATACCTTCAACTTTGAAAGAATACCAACTACTGCTGCAATGTTCGTTTCTCTCCTAAAATTTGATTATTAATCGGTAATAGGTGGAATTGTTCTAAGTGGTGGACTTATTAGCTTCATTTTCTCAAGAAACCCGTCTGCATTCAGCAGTTTGGTCTCTGGAGGTGCTTTGCTGGTCTTGAGCACCTTAAGTTTGAAAATCTGGAGGCAGGGGAAGTCCAGTTTTCCATTCATTCTAGGACAAGCAGGTAATTGATTTTTTTTCTCTTCTAAGTCAGTTGCATCTCCCCCTAGTTGTACGTCAGACATGCAATATAACATGTATTAATTCGGTTTATTCCCCTAAAAAATGGTCTTATTAATTTTAACTGTTTGTTTGGTCTCCAATGCTGGGTTATCTTTCTATTTGCCTGTGTATTCTTTCATTTGATCTCAATGAAAGTTCTATTTCTTTGAATAGGAAAAACCATAATAGATTCATATGACATGCTTGACTTGATTGGAAAACGTAAGTTACATCTAGTACTCTGATTGACTGTGTTTTTGCAGTATTTACGGCCTCGTTTTTCTGGAATAGTTATCAGACGTACTCATTGGTATGCACCTCATCTATATAAACATTTGACCAGAATCAATAGATATCAATGCTATAATGTAGTGATAATACTATTTTCGTAATTGTAGACCAAAAACGTGTTTCCAACAGCCATTTATGCTGCCCTCAGGTAAACTTTTTTTTGATAGTTCTGACTGCCATATCTTCCTTTGCTAGTTATAATACAGATTAATCAAATCCTCTAACGCAAAATTGGTTTTGGTTTTGTTTCTCTCGCAGTGCTGCAATGCTATGCTTCTACTTATATGTTGTAATTTCCGGAGGAAACCCACCGCCGAAAAAATTGAAGCCTTCTCCATCTGCTGCTTAATGAATTCAAATCCTATACATAGTTTGATTACACTTGGAAAAATAATTTACTTTCTGATGCAGCTTGCTGAGTTAAGTTAGGAGGGGAAAGAAGGCCTTATTTTAATTTGTTGGGATGGTAAAATACTAAATGAAGCTTAGGAGGTGGGAAAAATGCACTTGAATACTCTATAATCTGTGAGGAGCTAGGTGTAGAATTCATGAAGAGGGAGTATGTTACTTGAAGGCAACGAGAGCTTGGATTTTGCTTTTGAACACAATGGTTATGAGGTATGTATTTATGCAATCTGTAGAAATAACTTGTTAGTAGTTGAGTGCTTTCGTTGGGGTAAACTACCCTTTAATAAATAGACGAGGGGATTATTACTGGAAGACTTGTGTAATAATTTAGATGGTTATATAATATATGGTGAATATTTGAAGGTACAAAGTCTAGCTAGATTTGGTTTATCTCATTCAACTTCAGTACACCAAAAGAGATGAATTCTTCAATACATGTATGGAGGTTCGCTAATATAGTGTCTACACAAGCTTCTGGAGAGGCTGTTTACAAGGCTCAATCCCATGGAGGTAGAAATCATATTTGATTTTAGGT

mRNA sequence

ATGGCCTACTCTTTCTGCTGCTGGGTGTTAGTGAACTTATTGGCGTCAAAGCTAAAGTTTACGGGAGGGAGGAGTACAAATGGAAATGTAACATTTGCACGTGGAATTGTTCTAAGTGGTGGACTTATTAGCTTCATTTTCTCAAGAAACCCGTCTGCATTCAGCAGTTTGGTCTCTGGAGGTGCTTTGCTGGTCTTGAGCACCTTAAGTTTGAAAATCTGGAGGCAGGGGAAGTCCAGTTTTCCATTCATTCTAGGACAAGCAGTATTTACGGCCTCGTTTTTCTGGAATAGTTATCAGACGTACTCATTGACCAAAAACGTGTTTCCAACAGCCATTTATGCTGCCCTCAGTGCTGCAATGCTATGCTTCTACTTATATGTTGTAATTTCCGGAGGAAACCCACCGCCGAAAAAATTGAAGCCTTCTCCATCTGCTGCTTAATGAATTCAAATCCTATACATAGTTTGATTACACTTGGAAAAATAATTTACTTTCTGATGCAGCTTGCTGAGTTAAGTTAGGAGGGGAAAGAAGGCCTTATTTTAATTTGTTGGGATGGTAAAATACTAAATGAAGCTTAGGAGGTGGGAAAAATGCACTTGAATACTCTATAATCTGTGAGGAGCTAGGTGTAGAATTCATGAAGAGGGAGTATGTTACTTGAAGGCAACGAGAGCTTGGATTTTGCTTTTGAACACAATGGTTATGAGGTATGTATTTATGCAATCTGTAGAAATAACTTGTTAGTAGTTGAGTGCTTTCGTTGGGGTAAACTACCCTTTAATAAATAGACGAGGGGATTATTACTGGAAGACTTGTGTAATAATTTAGATGGTTATATAATATATGGTGAATATTTGAAGGTACAAAGTCTAGCTAGATTTGGTTTATCTCATTCAACTTCAGTACACCAAAAGAGATGAATTCTTCAATACATGTATGGAGGTTCGCTAATATAGTGTCTACACAAGCTTCTGGAGAGGCTGTTTACAAGGCTCAATCCCATGGAGGTAGAAATCATATTTGATTTTAGGT

Coding sequence (CDS)

ATGGCCTACTCTTTCTGCTGCTGGGTGTTAGTGAACTTATTGGCGTCAAAGCTAAAGTTTACGGGAGGGAGGAGTACAAATGGAAATGTAACATTTGCACGTGGAATTGTTCTAAGTGGTGGACTTATTAGCTTCATTTTCTCAAGAAACCCGTCTGCATTCAGCAGTTTGGTCTCTGGAGGTGCTTTGCTGGTCTTGAGCACCTTAAGTTTGAAAATCTGGAGGCAGGGGAAGTCCAGTTTTCCATTCATTCTAGGACAAGCAGTATTTACGGCCTCGTTTTTCTGGAATAGTTATCAGACGTACTCATTGACCAAAAACGTGTTTCCAACAGCCATTTATGCTGCCCTCAGTGCTGCAATGCTATGCTTCTACTTATATGTTGTAATTTCCGGAGGAAACCCACCGCCGAAAAAATTGAAGCCTTCTCCATCTGCTGCTTAA

Protein sequence

MAYSFCCWVLVNLLASKLKFTGGRSTNGNVTFARGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA*

Homology

[Close]

BLAST of CSPI04G17270 vs. ExPASy Swiss-Prot
Match: Q93V66 (Protein FATTY ACID EXPORT 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAX1 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.3e-35
Identity = 71/113 (62.83%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 35  GIVLSGGLISFIFSRNPSAFSS-LVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTAS 94
           G+V+SGGL+ F FSRN ++ S+ ++ GG LL LSTLSLKIWR+GKSSFP+ILGQAV +A 
Sbjct: 111 GLVVSGGLLGFAFSRNLTSLSTGVLYGGGLLALSTLSLKIWREGKSSFPYILGQAVLSAV 170

Query: 95  FFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSA 147
            FW ++  YS+TK +FP  ++A +SA MLCFY YVV+SGGNPPPKKLKPS ++
Sbjct: 171 VFWKNFTAYSMTKKLFPAGVFAVISACMLCFYSYVVLSGGNPPPKKLKPSATS 223

[Close]

BLAST of CSPI04G17270 vs. ExPASy Swiss-Prot
Match: Q9LJU6 (Protein FATTY ACID EXPORT 6 OS=Arabidopsis thaliana OX=3702 GN=FAX6 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-07
Identity = 34/105 (32.38%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 36  IVLSGGLISFIFSRNPSAFSSLVSGGALLVLS-TLSLKIWRQGKSSFPFILGQAVFTASF 95
           +++ GG I ++   + ++F+     G LL+L+  +SLK + + K+S   ++ Q V  A+ 
Sbjct: 13  LLIGGGFIGYMKKGSITSFAGGAGTGLLLILAGYISLKAFEKKKNSTIAMVLQTVIAAAL 72

Query: 96  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKK 140
                Q Y LT  + P  + A +SA M CFY+Y + +GGN  P K
Sbjct: 73  TLVMGQRYLLTGKIMPAGLVAGISALMTCFYVYKIATGGNKFPAK 117

[Close]

BLAST of CSPI04G17270 vs. ExPASy Swiss-Prot
Match: Q9C6T7 (Protein FATTY ACID EXPORT 5 OS=Arabidopsis thaliana OX=3702 GN=FAX5 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.0e-06
Identity = 32/105 (30.48%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 36  IVLSGGLISFIFSRNPSAFSSLVSGGALLVLS-TLSLKIWRQGKSSFPFILGQAVFTASF 95
           +++ GG I ++   + ++ +     G L+VL+  +SLK + + K+S    L + V  A+ 
Sbjct: 13  LLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLLATLLETVIAAAL 72

Query: 96  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKK 140
            +   Q +  T+ + P A+ A +SA M CFY+Y + +GGN  P K
Sbjct: 73  TFVMGQRFLQTQKIMPAALVAGISALMTCFYVYKIATGGNHIPPK 117

[Close]

BLAST of CSPI04G17270 vs. ExPASy Swiss-Prot
Match: Q9ZVH7 (Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAX3 PE=2 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-04
Identity = 33/96 (34.38%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 36  IVLSGGLISFIFSRN-PSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 95
           ++L GG I+F+ S + P+    ++ GGAL  LS  SLK  R+G+SS  F+ GQ    A  
Sbjct: 214 LLLVGGFINFMVSGSIPAIRFGVILGGALFALSLASLKSHRKGESSTKFLKGQMAIVAII 273

Query: 96  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVI 131
           F    +     K+ F        S  +L FYLY ++
Sbjct: 274 FLRELRLLLSQKSTFLGFFTTLTSGGVLGFYLYKMV 309

[Close]

BLAST of CSPI04G17270 vs. ExPASy TrEMBL
Match: A0A0A0KY33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G350590 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.4e-54
Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 33  ARGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTA 92
           A GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTA
Sbjct: 2   AGGIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTA 61

Query: 93  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 148
           SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 62  SFFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 116

[Close]

BLAST of CSPI04G17270 vs. ExPASy TrEMBL
Match: A0A5A7VMT0 (Protein FATTY ACID EXPORT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1779G00260 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.9e-53
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 35  GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 94
           GIVLSGGLISFIFSRNPSAFSSLVSGGALL LSTLSLKIWRQGKSSFPFILGQAVFTASF
Sbjct: 56  GIVLSGGLISFIFSRNPSAFSSLVSGGALLALSTLSLKIWRQGKSSFPFILGQAVFTASF 115

Query: 95  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 148
           FWNSYQTY LTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 116 FWNSYQTYLLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 168

[Close]

BLAST of CSPI04G17270 vs. ExPASy TrEMBL
Match: A0A1S3CM01 (protein FATTY ACID EXPORT 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502437 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.9e-53
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 35  GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 94
           GIVLSGGLISFIFSRNPSAFSSLVSGGALL LSTLSLKIWRQGKSSFPFILGQAVFTASF
Sbjct: 120 GIVLSGGLISFIFSRNPSAFSSLVSGGALLALSTLSLKIWRQGKSSFPFILGQAVFTASF 179

Query: 95  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 148
           FWNSYQTY LTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 180 FWNSYQTYLLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 232

[Close]

BLAST of CSPI04G17270 vs. ExPASy TrEMBL
Match: A0A6J1DKJ1 (protein FATTY ACID EXPORT 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021328 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.2e-51
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 0


Query: 35  GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 94
           GIVLSGGLISFIFSRNPSA SSL+SGGALL LSTLSLKIWRQGKSS PFILGQAVFTASF
Sbjct: 122 GIVLSGGLISFIFSRNPSALSSLISGGALLALSTLSLKIWRQGKSSLPFILGQAVFTASF 181

Query: 95  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 148
           FWN++QTYSLTKNVFPTAIYAALSAAMLCFYLYV+ISGGNPPPKKLKPSPSAA
Sbjct: 182 FWNNFQTYSLTKNVFPTAIYAALSAAMLCFYLYVIISGGNPPPKKLKPSPSAA 234

[Close]

BLAST of CSPI04G17270 vs. ExPASy TrEMBL
Match: A0A6J1HS27 (protein FATTY ACID EXPORT 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467271 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.3e-48
Identity = 101/113 (89.38%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 35  GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 94
           GIVLSGGLIS IFSRNPSA +SL+SGGALL LSTLSLKIWRQGKSS P+ILGQAV TASF
Sbjct: 115 GIVLSGGLISLIFSRNPSALTSLISGGALLALSTLSLKIWRQGKSSLPYILGQAVLTASF 174

Query: 95  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 148
           FWNS+QTYS TKNVFP+A+YAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 175 FWNSFQTYSSTKNVFPSALYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 227

[Close]

BLAST of CSPI04G17270 vs. NCBI nr
Match: XP_011653763.1 (protein FATTY ACID EXPORT 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 8.4e-54
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 35  GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 94
           GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF
Sbjct: 120 GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 179

Query: 95  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 148
           FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 180 FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 232

[Close]

BLAST of CSPI04G17270 vs. NCBI nr
Match: KGN54779.2 (hypothetical protein Csa_012831 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 8.4e-54
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 35  GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 94
           GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF
Sbjct: 79  GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 138

Query: 95  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 148
           FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 139 FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 191

[Close]

BLAST of CSPI04G17270 vs. NCBI nr
Match: XP_008464592.1 (PREDICTED: protein FATTY ACID EXPORT 1, chloroplastic [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 1.2e-52
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 35  GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 94
           GIVLSGGLISFIFSRNPSAFSSLVSGGALL LSTLSLKIWRQGKSSFPFILGQAVFTASF
Sbjct: 120 GIVLSGGLISFIFSRNPSAFSSLVSGGALLALSTLSLKIWRQGKSSFPFILGQAVFTASF 179

Query: 95  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 148
           FWNSYQTY LTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 180 FWNSYQTYLLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 232

[Close]

BLAST of CSPI04G17270 vs. NCBI nr
Match: KAA0067866.1 (protein FATTY ACID EXPORT 1 [Cucumis melo var. makuwa] >TYK14906.1 protein FATTY ACID EXPORT 1 [Cucumis melo var. makuwa])

HSP 1 Score: 216.9 bits (551), Expect = 1.2e-52
Identity = 111/113 (98.23%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 35  GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 94
           GIVLSGGLISFIFSRNPSAFSSLVSGGALL LSTLSLKIWRQGKSSFPFILGQAVFTASF
Sbjct: 56  GIVLSGGLISFIFSRNPSAFSSLVSGGALLALSTLSLKIWRQGKSSFPFILGQAVFTASF 115

Query: 95  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 148
           FWNSYQTY LTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA
Sbjct: 116 FWNSYQTYLLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 168

[Close]

BLAST of CSPI04G17270 vs. NCBI nr
Match: XP_022153929.1 (protein FATTY ACID EXPORT 1, chloroplastic [Momordica charantia])

HSP 1 Score: 211.1 bits (536), Expect = 6.6e-51
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 0


Query: 35  GIVLSGGLISFIFSRNPSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 94
           GIVLSGGLISFIFSRNPSA SSL+SGGALL LSTLSLKIWRQGKSS PFILGQAVFTASF
Sbjct: 122 GIVLSGGLISFIFSRNPSALSSLISGGALLALSTLSLKIWRQGKSSLPFILGQAVFTASF 181

Query: 95  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA 148
           FWN++QTYSLTKNVFPTAIYAALSAAMLCFYLYV+ISGGNPPPKKLKPSPSAA
Sbjct: 182 FWNNFQTYSLTKNVFPTAIYAALSAAMLCFYLYVIISGGNPPPKKLKPSPSAA 234

[Close]

BLAST of CSPI04G17270 vs. TAIR 10
Match: AT3G57280.1 (Transmembrane proteins 14C )

HSP 1 Score: 148.7 bits (374), Expect = 3.8e-36
Identity = 71/113 (62.83%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 35  GIVLSGGLISFIFSRNPSAFSS-LVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTAS 94
           G+V+SGGL+ F FSRN ++ S+ ++ GG LL LSTLSLKIWR+GKSSFP+ILGQAV +A 
Sbjct: 111 GLVVSGGLLGFAFSRNLTSLSTGVLYGGGLLALSTLSLKIWREGKSSFPYILGQAVLSAV 170

Query: 95  FFWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSA 147
            FW ++  YS+TK +FP  ++A +SA MLCFY YVV+SGGNPPPKKLKPS ++
Sbjct: 171 VFWKNFTAYSMTKKLFPAGVFAVISACMLCFYSYVVLSGGNPPPKKLKPSATS 223

[Close]

BLAST of CSPI04G17270 vs. TAIR 10
Match: AT3G20510.1 (Transmembrane proteins 14C )

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08
Identity = 34/105 (32.38%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 36  IVLSGGLISFIFSRNPSAFSSLVSGGALLVLS-TLSLKIWRQGKSSFPFILGQAVFTASF 95
           +++ GG I ++   + ++F+     G LL+L+  +SLK + + K+S   ++ Q V  A+ 
Sbjct: 13  LLIGGGFIGYMKKGSITSFAGGAGTGLLLILAGYISLKAFEKKKNSTIAMVLQTVIAAAL 72

Query: 96  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKK 140
                Q Y LT  + P  + A +SA M CFY+Y + +GGN  P K
Sbjct: 73  TLVMGQRYLLTGKIMPAGLVAGISALMTCFYVYKIATGGNKFPAK 117

[Close]

BLAST of CSPI04G17270 vs. TAIR 10
Match: AT1G50740.1 (Transmembrane proteins 14C )

HSP 1 Score: 52.8 bits (125), Expect = 2.8e-07
Identity = 32/105 (30.48%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 36  IVLSGGLISFIFSRNPSAFSSLVSGGALLVLS-TLSLKIWRQGKSSFPFILGQAVFTASF 95
           +++ GG I ++   + ++ +     G L+VL+  +SLK + + K+S    L + V  A+ 
Sbjct: 13  LLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLLATLLETVIAAAL 72

Query: 96  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVISGGNPPPKK 140
            +   Q +  T+ + P A+ A +SA M CFY+Y + +GGN  P K
Sbjct: 73  TFVMGQRFLQTQKIMPAALVAGISALMTCFYVYKIATGGNHIPPK 117

[Close]

BLAST of CSPI04G17270 vs. TAIR 10
Match: AT2G38550.1 (Transmembrane proteins 14C )

HSP 1 Score: 47.8 bits (112), Expect = 9.1e-06
Identity = 33/96 (34.38%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 36  IVLSGGLISFIFSRN-PSAFSSLVSGGALLVLSTLSLKIWRQGKSSFPFILGQAVFTASF 95
           ++L GG I+F+ S + P+    ++ GGAL  LS  SLK  R+G+SS  F+ GQ    A  
Sbjct: 214 LLLVGGFINFMVSGSIPAIRFGVILGGALFALSLASLKSHRKGESSTKFLKGQMAIVAII 273

Query: 96  FWNSYQTYSLTKNVFPTAIYAALSAAMLCFYLYVVI 131
           F    +     K+ F        S  +L FYLY ++
Sbjct: 274 FLRELRLLLSQKSTFLGFFTTLTSGGVLGFYLYKMV 309

The following BLAST results are available for this feature:

BLAST of CSPI04G17270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93V66	5.3e-35	62.83	Protein FATTY ACID EXPORT 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FA...	[more]
Q9LJU6	3.6e-07	32.38	Protein FATTY ACID EXPORT 6 OS=Arabidopsis thaliana OX=3702 GN=FAX6 PE=3 SV=1	[more]
Q9C6T7	4.0e-06	30.48	Protein FATTY ACID EXPORT 5 OS=Arabidopsis thaliana OX=3702 GN=FAX5 PE=3 SV=1	[more]
Q9ZVH7	1.3e-04	34.38	Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FA...	[more]

BLAST of CSPI04G17270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY33	2.4e-54	99.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G350590 PE=3 SV=1	[more]
A0A5A7VMT0	5.9e-53	98.23	Protein FATTY ACID EXPORT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CM01	5.9e-53	98.23	protein FATTY ACID EXPORT 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1035024...	[more]
A0A6J1DKJ1	3.2e-51	93.81	protein FATTY ACID EXPORT 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1HS27	3.3e-48	89.38	protein FATTY ACID EXPORT 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CSPI04G17270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653763.1	8.4e-54	100.00	protein FATTY ACID EXPORT 1, chloroplastic [Cucumis sativus]	[more]
KGN54779.2	8.4e-54	100.00	hypothetical protein Csa_012831 [Cucumis sativus]	[more]
XP_008464592.1	1.2e-52	98.23	PREDICTED: protein FATTY ACID EXPORT 1, chloroplastic [Cucumis melo]	[more]
KAA0067866.1	1.2e-52	98.23	protein FATTY ACID EXPORT 1 [Cucumis melo var. makuwa] >TYK14906.1 protein FATTY...	[more]
XP_022153929.1	6.6e-51	93.81	protein FATTY ACID EXPORT 1, chloroplastic [Momordica charantia]	[more]

BLAST of CSPI04G17270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57280.1	3.8e-36	62.83	Transmembrane proteins 14C	[more]
AT3G20510.1	2.5e-08	32.38	Transmembrane proteins 14C	[more]
AT1G50740.1	2.8e-07	30.48	Transmembrane proteins 14C	[more]
AT2G38550.1	9.1e-06	34.38	Transmembrane proteins 14C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005349	TMEM14 family	PFAM	PF03647	Tmemb_14	coord: 36..125 e-value: 1.6E-7 score: 32.0
IPR005349	TMEM14 family	PANTHER	PTHR12668	TRANSMEMBRANE PROTEIN 14, 15	coord: 35..144
IPR044890	TMEM14 superfamily	GENE3D	1.10.10.1740		coord: 29..130 e-value: 6.3E-9 score: 37.8
None	No IPR available	PANTHER	PTHR12668:SF48	PROTEIN FATTY ACID EXPORT 1, CHLOROPLASTIC	coord: 35..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G17270.1	CSPI04G17270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003824	catalytic activity