CSPI04G17260 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G17260
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr4: 14760333 .. 14760993 (+)
RNA-Seq Expression	CSPI04G17260
Synteny	CSPI04G17260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTAACCAAAATCAAAATTCACAAATTTGTTGTGAATTCATGTGACCCAAAGCTACTTCCAACACCTTCCAGAATCTATCATTTCAACCAATTAACCATTAAAATTCATCAAAAATTTACAATACAAAACCATCCATCCTACAATTTTCATTCTTACCACAACTACCAGAGTATGGCAGAAACTACAACGATTAAAGGAATGAGATCTGCACGTATAACCGGCAACAGCTATTTCACAGCCGGCGGACGAGGAAGTGGCACGGCACACTACGACATGCAGTTGTCGGATTGTGAACGGGGACAGGCGCAATCAAAACGCAATCCGGATTCAACGAACGACCTGCAACTTGCAACAGATGATTCACGACGAAGGGATGGCGTGCAGCAGAGAGATGGCGTACGGTTGCAGCGGCGACAGAACGAAAAGAAAAGATCAGACACTGGCGGAATCTTGGATTTTGGATGGCACGGCGTCGCAGATCTGAACGACGACTGCAAGGTGACGCGTACGGCTTGCTTCGCGAATGGAGACAGAGATGGCGGCCGACGGTTGCAGACGTAGCAGATGAAGACGCGCTGCGGCTGGGTAGGGTAAAAAAGAAAGAGAAACGGAAGAAGAGGAGATTGGGGTTGAGGTGGCCGGCGGCTGCAAACTGAAGG

mRNA sequence

GGCTAACCAAAATCAAAATTCACAAATTTGTTGTGAATTCATGTGACCCAAAGCTACTTCCAACACCTTCCAGAATCTATCATTTCAACCAATTAACCATTAAAATTCATCAAAAATTTACAATACAAAACCATCCATCCTACAATTTTCATTCTTACCACAACTACCAGAGTATGGCAGAAACTACAACGATTAAAGGAATGAGATCTGCACGTATAACCGGCAACAGCTATTTCACAGCCGGCGGACGAGGAAGTGGCACGGCACACTACGACATGCAGTTGTCGGATTGTGAACGGGGACAGGCGCAATCAAAACGCAATCCGGATTCAACGAACGACCTGCAACTTGCAACAGATGATTCACGACGAAGGGATGGCGTGCAGCAGAGAGATGGCGTACGGTTGCAGCGGCGACAGAACGAAAAGAAAAGATCAGACACTGGCGGAATCTTGGATTTTGGATGGCACGGCGTCGCAGATCTGAACGACGACTGCAAGGTGACGCGTACGGCTTGCTTCGCGAATGGAGACAGAGATGGCGGCCGACGGTTGCAGACGTAGCAGATGAAGACGCGCTGCGGCTGGGTAGGGTAAAAAAGAAAGAGAAACGGAAGAAGAGGAGATTGGGGTTGAGGTGGCCGGCGGCTGCAAACTGAAGG

Coding sequence (CDS)

CTAACCAAAATCAAAATTCACAAATTTGTTGTGAATTCATGTGACCCAAAGCTACTTCCAACACCTTCCAGAATCTATCATTTCAACCAATTAACCATTAAAATTCATCAAAAATTTACAATACAAAACCATCCATCCTACAATTTTCATTCTTACCACAACTACCAGAGTATGGCAGAAACTACAACGATTAAAGGAATGAGATCTGCACGTATAACCGGCAACAGCTATTTCACAGCCGGCGGACGAGGAAGTGGCACGGCACACTACGACATGCAGTTGTCGGATTGTGAACGGGGACAGGCGCAATCAAAACGCAATCCGGATTCAACGAACGACCTGCAACTTGCAACAGATGATTCACGACGAAGGGATGGCGTGCAGCAGAGAGATGGCGTACGGTTGCAGCGGCGACAGAACGAAAAGAAAAGATCAGACACTGGCGGAATCTTGGATTTTGGATGGCACGGCGTCGCAGATCTGAACGACGACTGCAAGGTGACGCGTACGGCTTGCTTCGCGAATGGAGACAGAGATGGCGGCCGACGGTTGCAGACGTAG

Protein sequence

LTKIKIHKFVVNSCDPKLLPTPSRIYHFNQLTIKIHQKFTIQNHPSYNFHSYHNYQSMAETTTIKGMRSARITGNSYFTAGGRGSGTAHYDMQLSDCERGQAQSKRNPDSTNDLQLATDDSRRRDGVQQRDGVRLQRRQNEKKRSDTGGILDFGWHGVADLNDDCKVTRTACFANGDRDGGRRLQT*

Homology

The following BLAST results are available for this feature:

BLAST of CSPI04G17260 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G17260 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G17260 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G17260 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G17260.1	CSPI04G17260.1	mRNA