CSPI04G17090 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G17090
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 14503518 .. 14503703 (+)
RNA-Seq ExpressionCSPI04G17090
SyntenyCSPI04G17090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTATATCAAATCAAACACTTTTGGATCCTTCATTGGCAAAGCAAAAGAGAACGAACAGAAAATTTTGACCAAGAAGGAAGATGAAGAAGATTACTTGACTGACAAGGGAAATAAGTGGAAGACAGCTGACATCCCCTTCAAAATCGTTCACAAGACTGAAGAAGATGAAGCAACAGTGTGA

mRNA sequence

ATGCCGTATATCAAATCAAACACTTTTGGATCCTTCATTGGCAAAGCAAAAGAGAACGAACAGAAAATTTTGACCAAGAAGGAAGATGAAGAAGATTACTTGACTGACAAGGGAAATAAGTGGAAGACAGCTGACATCCCCTTCAAAATCGTTCACAAGACTGAAGAAGATGAAGCAACAGTGTGA

Coding sequence (CDS)

ATGCCGTATATCAAATCAAACACTTTTGGATCCTTCATTGGCAAAGCAAAAGAGAACGAACAGAAAATTTTGACCAAGAAGGAAGATGAAGAAGATTACTTGACTGACAAGGGAAATAAGTGGAAGACAGCTGACATCCCCTTCAAAATCGTTCACAAGACTGAAGAAGATGAAGCAACAGTGTGA

Protein sequence

MPYIKSNTFGSFIGKAKENEQKILTKKEDEEDYLTDKGNKWKTADIPFKIVHKTEEDEATV*
Homology
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BLAST of CSPI04G17090 vs. ExPASy TrEMBL
Match: A0A0A0L0D9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338970 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.4e-26
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MPYIKSNTFGSFIGKAKENEQKILTKKEDEEDYLTDKGNKWKTADIPFKIVHKTEEDEAT 60
          MPYIKSNTFGSFIGKAKENEQKILTKKEDEEDYLTDKGNKWKTADIPFKIVHK EEDEAT
Sbjct: 1  MPYIKSNTFGSFIGKAKENEQKILTKKEDEEDYLTDKGNKWKTADIPFKIVHKIEEDEAT 60

Query: 61 V 62
          V
Sbjct: 61 V 61

The following BLAST results are available for this feature:
BLAST of CSPI04G17090 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G17090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0D97.4e-2698.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338970 PE=4 SV=1[more]
BLAST of CSPI04G17090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI04G17090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G17090.1CSPI04G17090.1mRNA