CSPI04G17080 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G17080
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RNA exonuclease 4
Location	Chr4: 14492639 .. 14494550 (-)
RNA-Seq Expression	CSPI04G17080
Synteny	CSPI04G17080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACACAAATGCTCAGCATGCTACAAGCAATATAAGAAGAAAGAGCATCTTATCGAGCATATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGAGAACATCTAATGGGTGAGATAGTTTTGTGTATCTTTATGGTAATATATCATAACACCATCTCATTATTTCCAGTCTTTTAGGTCCACTTTCAAAATCAAATTGTTCAAAAATTTTCTCAGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCGGAATCTCTCAGTGATCACCAAGACATTTGCTGCATAACAGCACCTGTTCACCAAGTAAGTCGCTCTCTATGCATCATATATCATATATGATAAATAATAAGGTTACTGGTAGTTCTCAAAAAAAGAAAAAGGTTTCGGGTAGTTTATATTTTTATATATCAAGTAATTGAGCCATTTATTATGATATCATACATGCATTTCAGAATTTGATTGGGGCTCTGTTTTAGGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTACGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATTGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTATAGGTACTTGTCTGTGGCATTATCTTGTTCTCTAAAGAAGGTTTTAGCTTTTAAAATCTAGCCTATAGATGCTCATTTCCCAGTCATGTTGTAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAATGTCCAGGAAAAAGTATTGAAACTCTTGTTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGATTGAATTATCCCGATCATATGTTGAGGTGATTTTTACTAACTTGGTTTGTAATTTTGTGAGGTTTAGTTCACTTTTATTGAAAGTAAAATCCATTTGAACTTTGAAGTGATCTACTGAATTTCGATGCACCAAAAAAAGAAAGAAAAACACTATCAACTACTACTTTTCAACCTTGCACATTATTTTCTCTGGAAATAATTCCCACCATTGAGAGAAACCAACGTATTTTTGCTCTTTTTTCTTTAATCATTTTTCCTTTTTGCTTCGTTTTTTTATTGTTAAATGCACATTATTCATACACCTTTTGCCTGATATTTTTTTGCAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTAAGATACATTAACTATGATTCATACTGCTTTAAAGTATGATAAGCAATTTTTTATATTCTTTTTCGAAACGGAGACAAGAACTTCTTTATTAATATGAACTCAAAGTACAAGAGAGTTATACGAAGAGAGCCATAAAGAAGTAGTAATCAAGGGAGTCCTAGAGGGATCAGAAGGTGCGGACATCTCAACTTGGTTGACACCCCCTTAGCGCCAAACATCATATCCTGAGGACAAGCAAGCAAAATAATAAAGAAACAATAATAAAAGCATCAGCTTAGTACAAAGGTCCAAAAAACAGTATGGGACCGGAAGAAAACAACAAGAAACTCGGGAGTGCAGAAAACAAAATAAAACAGGGGGCAATCCTTTGAGGCTTCAAAAGCAGTAGAGGGCGTCGGTCTGTATAATATGCATTGAAACTGAGGCAGCTTAGGATTAGGCAGGTTGTGAAAGAAAAGCAGCCCAATTAAGGTAAATGTCTTGGATGGA

mRNA sequence

AGACACAAATGCTCAGCATGCTACAAGCAATATAAGAAGAAAGAGCATCTTATCGAGCATATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGAGAACATCTAATGGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCGGAATCTCTCAGTGATCACCAAGACATTTGCTGCATAACAGCACCTGTTCACCAAGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTACGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATTGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTATAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAATGTCCAGGAAAAAGTATTGAAACTCTTGTTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGATTGAATTATCCCGATCATATGTTGAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTAAGATACATTAACTATGATTCATACTGCTTTAAAGTATGATAAGCAATTTTTTATATTCTTTTTCGAAACGGAGACAAGAACTTCTTTATTAATATGAACTCAAAGTACAAGAGAGTTATACGAAGAGAGCCATAAAGAAGTAGTAATCAAGGGAGTCCTAGAGGGATCAGAAGGTGCGGACATCTCAACTTGGTTGACACCCCCTTAGCGCCAAACATCATATCCTGAGGACAAGCAAGCAAAATAATAAAGAAACAATAATAAAAGCATCAGCTTAGTACAAAGGTCCAAAAAACAGTATGGGACCGGAAGAAAACAACAAGAAACTCGGGAGTGCAGAAAACAAAATAAAACAGGGGGCAATCCTTTGAGGCTTCAAAAGCAGTAGAGGGCGTCGGTCTGTATAATATGCATTGAAACTGAGGCAGCTTAGGATTAGGCAGGTTGTGAAAGAAAAGCAGCCCAATTAAGGTAAATGTCTTGGATGGA

Coding sequence (CDS)

ATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCACTGCAAATCATTTGAATCATTGAGAGAACATCTAATGGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCGGAATCTCTCAGTGATCACCAAGACATTTGCTGCATAACAGCACCTGTTCACCAAGGAACAAGTCTACCACCAACTGATTTATCCGATTGTTACGAAGAAGATCGTTCTGATCGAGGCCTTGGAGCAATAGCTATTGATTGTGTAATGGCTGGTGGAGGAAGTGATGGTGCACTGGACATTTGTGTTTGGATATGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCGATCACGAACTATAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAATGTCCAGGAAAAAGTATTGAAACTCTTGTTAAATGGAGAATCCATTGGGAGATTGAGATTGAATGGTGGTAAAGCTAAGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCCTGAGATTGAATTATCCCGATCATATGTTGAGGGACACGGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGTCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTAA

Protein sequence

MRVSYHSVHQPRCGVCLKHCKSFESLREHLMEQGCGLCLRVLDGPESLSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG*

Homology

[Close]

BLAST of CSPI04G17080 vs. ExPASy Swiss-Prot
Match: Q4IEV5 (RNA exonuclease 4 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=REX4 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 50/144 (34.72%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 88  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRY 147
           IAIDC M G G  G       + +VD     I++++V+P+  +TN+R  V+G+ ++ MR+
Sbjct: 134 IAIDCEMVGVGPGGHESALARVSIVDFHGVQIYDSYVKPKEKVTNWRTAVSGISQKSMRF 193

Query: 148 AMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTAR 207
           A   + VQ ++ KLL              + ++LVGHDL+HDL+ L L++P   +RDTA+
Sbjct: 194 ARDFEEVQAEIDKLL--------------RGRILVGHDLKHDLEALILSHPGKDIRDTAK 253

Query: 208 YHPLMK-TNLVSHSLKYLTRAYLG 231
           +    K  N    SL+ L +  LG
Sbjct: 254 FSGFKKYANGRKPSLRVLAQQLLG 263

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BLAST of CSPI04G17080 vs. ExPASy Swiss-Prot
Match: Q08237 (RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=REX4 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 0


Query: 88  IAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRY 147
           IA+DC   G G +G       I +V+    ++ + FV+P+  +  +R  V+G+K EHM+ 
Sbjct: 122 IAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEWRTWVSGIKPEHMKN 181

Query: 148 AMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTAR 207
           A+  K  Q+K   +L              + ++LVGH L+HDL+ L L++P  +LRDT+R
Sbjct: 182 AITFKEAQKKTADIL--------------EGRILVGHALKHDLEALMLSHPKSLLRDTSR 241

Query: 208 YHPLMK--TNLVSHSLKYLTRAYL 230
           + P  K      + SLK LTR  L
Sbjct: 242 HLPFRKLYAKGKTPSLKKLTREVL 251

[Close]

BLAST of CSPI04G17080 vs. ExPASy Swiss-Prot
Match: Q7S9B7 (RNA exonuclease 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=rex-4 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.1e-14
Identity = 51/162 (31.48%), Postives = 83/162 (51.23%), Query Frame = 0


Query: 70  TDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIP 129
           TDL+   +  +S+     ++IDC M G G  GA  +     +VD     I++++V+P   
Sbjct: 199 TDLALILQATKSNTLGKYLSIDCEMVGTGPSGATSVLARCSIVDFHGHQIYDSYVRPTAF 258

Query: 130 ITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHD 189
           +T++R  V+G+ + HM  A   ++VQ  V  LL              K ++LVGHD++HD
Sbjct: 259 VTDWRTHVSGISKRHMASARSFESVQATVAALL--------------KGRILVGHDVKHD 318

Query: 190 LDCLRLNYPDHMLRDTARYHPLMK-TNLVSHSLKYLTRAYLG 231
           L+ L   +P   +RDTA+Y    K  +    SL+ L +  LG
Sbjct: 319 LEVLGFEHPHRDIRDTAKYSGFRKYGHGPKPSLRVLAKEVLG 346

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BLAST of CSPI04G17080 vs. ExPASy Swiss-Prot
Match: Q9GZR2 (RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-14
Identity = 47/146 (32.19%), Postives = 83/146 (56.85%), Query Frame = 0


Query: 87  AIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMR 146
           A+A+DC M G G  G   +   + +V++  K +++ +V+P  P+T+YR  V+G++ E+++
Sbjct: 243 ALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLK 302

Query: 147 YAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTA 206
               L+ VQ++V ++L              K ++LVGH L +DL  L L++P   +RDT 
Sbjct: 303 QGEELEVVQKEVAEML--------------KGRILVGHALHNDLKVLFLDHPKKKIRDTQ 362

Query: 207 RYHPLMKTNLVS--HSLKYLTRAYLG 231
           +Y P  K+ + S   SL+ L+   LG
Sbjct: 363 KYKP-FKSQVKSGRPSLRLLSEKILG 373

[Close]

BLAST of CSPI04G17080 vs. ExPASy Swiss-Prot
Match: Q4PER6 (RNA exonuclease 4 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=REX4 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.1e-14
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 0


Query: 69  PTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIFNTFVQPQI 128
           P+D S   +E  +      +AIDC M G G  G+  I   + +V+     I++ FV+PQ 
Sbjct: 122 PSDASSAKKEPGN-----YLAIDCEMVGVGDKGSESILARVSIVNFHGATIYDQFVRPQE 181

Query: 129 PITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKLLVGHDLEH 188
            +T+YR  V+G++ + ++ A     VQ +V  L+              K K+LVGH +++
Sbjct: 182 KVTDYRTWVSGVRPKDLKGAPSFSQVQGEVANLI--------------KGKVLVGHAIQN 241

Query: 189 DLDCLRLNYPDHMLRDTARYHPLMKTNLVSH-SLKYLTRAYLG 231
           DL  L L++P  ++RDTA + PL       + SLK L +  LG
Sbjct: 242 DLKALLLSHPKVLIRDTATFQPLRDLAKTKYPSLKKLAKLVLG 265

[Close]

BLAST of CSPI04G17080 vs. ExPASy TrEMBL
Match: A0A0A0KYE9 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G338960 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 6.4e-131
Identity = 230/243 (94.65%), Postives = 230/243 (94.65%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLM-------------EQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLM             EQGCGLCLRVLDGPES
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV
Sbjct: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 231
           IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

[Close]

BLAST of CSPI04G17080 vs. ExPASy TrEMBL
Match: A0A5D3BBM9 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00940 PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.7e-128
Identity = 224/243 (92.18%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLM-------------EQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLM             EQGCGLCLRVLDGPE+
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPET 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+HQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICV
Sbjct: 61  LSEHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHLRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 231
           IGRLR NGGKAKLLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGRLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

[Close]

BLAST of CSPI04G17080 vs. ExPASy TrEMBL
Match: A0A5A7TPB9 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00150 PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.7e-128
Identity = 224/243 (92.18%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLM-------------EQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLM             EQGCGLCLRVLDGPE+
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPET 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+HQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICV
Sbjct: 61  LSEHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 231
           IG+LR NGGKAKLLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

[Close]

BLAST of CSPI04G17080 vs. ExPASy TrEMBL
Match: A0A5A7TYQ2 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3741G00010 PE=3 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 8.1e-126
Identity = 220/237 (92.83%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMEQ-------GCGLCLRVLDGPESLSDHQD 60
           MRVSYHSVHQPRCGVCLKHCKSFESLR HLM +       GCGLCLRVLDGPE+LS+HQD
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLRVHLMGEIVLCIFDGCGLCLRVLDGPETLSEHQD 60

Query: 61  ICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVD 120
           ICCITAPVHQGTSLPPTDLSD YEEDRSDRGLGAIA+DCVMAGGGSDGALDICVWICLVD
Sbjct: 61  ICCITAPVHQGTSLPPTDLSDGYEEDRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVD 120

Query: 121 EDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRL 180
           EDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGESIGRLR 
Sbjct: 121 EDEKLIFNTFVQPQIPITNYRHEVTGLKEEHLRYAMPLKNVQEKVLKLLLNGESIGRLRS 180

Query: 181 NGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG 231
           NGGKAKLLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG
Sbjct: 181 NGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG 237

[Close]

BLAST of CSPI04G17080 vs. ExPASy TrEMBL
Match: A0A5D3BMN0 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00030 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 5.8e-124
Identity = 214/230 (93.04%), Postives = 224/230 (97.39%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMEQGCGLCLRVLDGPESLSDHQDICCITAP 60
           MRVSYHSVHQPRCGVCLKHCKSFESLRE+LMEQGCGLCLRVLD P++LS+H +ICCITAP
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREYLMEQGCGLCLRVLDSPKTLSEHLNICCITAP 60

Query: 61  VHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIF 120
           VHQGTSL PTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICVWICLVDE EKLIF
Sbjct: 61  VHQGTSLLPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVDEHEKLIF 120

Query: 121 NTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKL 180
           NTFVQPQIPITNYRHEVTGLKEEH+RYAMPL+NVQEKVLKLLLNGESIGRLR NGGKAKL
Sbjct: 121 NTFVQPQIPITNYRHEVTGLKEEHLRYAMPLRNVQEKVLKLLLNGESIGRLRSNGGKAKL 180

Query: 181 LVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG 231
           LVGHDLEHDLD LR+NYPDHMLRDTARYHPL+KTNLVSHSLKYLTRAYLG
Sbjct: 181 LVGHDLEHDLDYLRMNYPDHMLRDTARYHPLIKTNLVSHSLKYLTRAYLG 230

[Close]

BLAST of CSPI04G17080 vs. NCBI nr
Match: XP_004142658.1 (apoptosis-enhancing nuclease isoform X2 [Cucumis sativus] >KGN54753.2 hypothetical protein Csa_012744 [Cucumis sativus])

HSP 1 Score: 485.7 bits (1249), Expect = 2.2e-133
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMEQGCGLCLRVLDGPESLSDHQDICCITAP 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLMEQGCGLCLRVLDGPESLSDHQDICCITAP
Sbjct: 34  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMEQGCGLCLRVLDGPESLSDHQDICCITAP 93

Query: 61  VHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIF 120
           VHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIF
Sbjct: 94  VHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVDEDEKLIF 153

Query: 121 NTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKL 180
           NTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKL
Sbjct: 154 NTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRLNGGKAKL 213

Query: 181 LVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG 231
           LVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG
Sbjct: 214 LVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG 263

[Close]

BLAST of CSPI04G17080 vs. NCBI nr
Match: XP_011653750.1 (apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_011653752.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_031739807.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_031739808.1 apoptosis-enhancing nuclease isoform X1 [Cucumis sativus])

HSP 1 Score: 476.5 bits (1225), Expect = 1.3e-130
Identity = 230/243 (94.65%), Postives = 230/243 (94.65%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLM-------------EQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLM             EQGCGLCLRVLDGPES
Sbjct: 34  MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPES 93

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV
Sbjct: 94  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 153

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 154 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 213

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 231
           IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 214 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 273

[Close]

BLAST of CSPI04G17080 vs. NCBI nr
Match: KAA0045030.1 (apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 468.4 bits (1204), Expect = 3.6e-128
Identity = 224/243 (92.18%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLM-------------EQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLM             EQGCGLCLRVLDGPE+
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPET 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+HQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICV
Sbjct: 61  LSEHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 231
           IG+LR NGGKAKLLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGKLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

[Close]

BLAST of CSPI04G17080 vs. NCBI nr
Match: TYJ96296.1 (apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 468.4 bits (1204), Expect = 3.6e-128
Identity = 224/243 (92.18%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLM-------------EQGCGLCLRVLDGPES 60
           MRVSYHSVHQPRCGVCLKHCKSFESLREHLM             EQGCGLCLRVLDGPE+
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMGPLSKSNCSKIFSEQGCGLCLRVLDGPET 60

Query: 61  LSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICV 120
           LS+HQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIA+DCVMAGGGSDGALDICV
Sbjct: 61  LSEHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAMDCVMAGGGSDGALDICV 120

Query: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGES 180
           WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGES
Sbjct: 121 WICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHLRYAMPLKNVQEKVLKLLLNGES 180

Query: 181 IGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 231
           IGRLR NGGKAKLLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA
Sbjct: 181 IGRLRSNGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRA 240

[Close]

BLAST of CSPI04G17080 vs. NCBI nr
Match: KAA0046505.1 (apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa] >TYK01913.1 apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 459.5 bits (1181), Expect = 1.7e-125
Identity = 220/237 (92.83%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLMEQ-------GCGLCLRVLDGPESLSDHQD 60
           MRVSYHSVHQPRCGVCLKHCKSFESLR HLM +       GCGLCLRVLDGPE+LS+HQD
Sbjct: 1   MRVSYHSVHQPRCGVCLKHCKSFESLRVHLMGEIVLCIFDGCGLCLRVLDGPETLSEHQD 60

Query: 61  ICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDICVWICLVD 120
           ICCITAPVHQGTSLPPTDLSD YEEDRSDRGLGAIA+DCVMAGGGSDGALDICVWICLVD
Sbjct: 61  ICCITAPVHQGTSLPPTDLSDGYEEDRSDRGLGAIAMDCVMAGGGSDGALDICVWICLVD 120

Query: 121 EDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNGESIGRLRL 180
           EDEKLIFNTFVQPQIPITNYRHEVTGLKEEH+RYAMPLKNVQEKVLKLLLNGESIGRLR 
Sbjct: 121 EDEKLIFNTFVQPQIPITNYRHEVTGLKEEHLRYAMPLKNVQEKVLKLLLNGESIGRLRS 180

Query: 181 NGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG 231
           NGGKAKLLVGHDLEHDLDCLR+NYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG
Sbjct: 181 NGGKAKLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLG 237

[Close]

BLAST of CSPI04G17080 vs. TAIR 10
Match: AT2G48100.1 (Exonuclease family protein )

HSP 1 Score: 252.3 bits (643), Expect = 3.8e-67
Identity = 124/245 (50.61%), Postives = 168/245 (68.57%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHL---------------MEQGCGLCLRVLDGP 60
           M++SYHS+HQPRCGVCLKHCKSFES+REHL                ++GC LCL++ +  
Sbjct: 36  MKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEA 95

Query: 61  ESLSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDI 120
            +L++H++ C ++ P   GTS      S       +   L A+A+DC M GGG+DG +D 
Sbjct: 96  FALAEHKNKCHLSPPRPLGTSTQRNPSSSL-----AGSRLKAMALDCEMVGGGADGTIDQ 155

Query: 121 CVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNG 180
           C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL +E ++  MPL++V+E+V   L  G
Sbjct: 156 CASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGG 215

Query: 181 ESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLT 231
           ++ G  RL      LLVGHDL HD+ CL+L YP H+LRDTA+Y PLMKTNLVS SLKYLT
Sbjct: 216 QNDGAGRL------LLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLT 269

[Close]

BLAST of CSPI04G17080 vs. TAIR 10
Match: AT2G48100.2 (Exonuclease family protein )

HSP 1 Score: 252.3 bits (643), Expect = 3.8e-67
Identity = 124/245 (50.61%), Postives = 168/245 (68.57%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHL---------------MEQGCGLCLRVLDGP 60
           M++SYHS+HQPRCGVCLKHCKSFES+REHL                ++GC LCL++ +  
Sbjct: 36  MKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEA 95

Query: 61  ESLSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDI 120
            +L++H++ C ++ P   GTS      S       +   L A+A+DC M GGG+DG +D 
Sbjct: 96  FALAEHKNKCHLSPPRPLGTSTQRNPSSSL-----AGSRLKAMALDCEMVGGGADGTIDQ 155

Query: 121 CVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNG 180
           C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL +E ++  MPL++V+E+V   L  G
Sbjct: 156 CASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGG 215

Query: 181 ESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLT 231
           ++ G  RL      LLVGHDL HD+ CL+L YP H+LRDTA+Y PLMKTNLVS SLKYLT
Sbjct: 216 QNDGAGRL------LLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLT 269

[Close]

BLAST of CSPI04G17080 vs. TAIR 10
Match: AT2G48100.3 (Exonuclease family protein )

HSP 1 Score: 252.3 bits (643), Expect = 3.8e-67
Identity = 124/245 (50.61%), Postives = 168/245 (68.57%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHL---------------MEQGCGLCLRVLDGP 60
           M++SYHS+HQPRCGVCLKHCKSFES+REHL                ++GC LCL++ +  
Sbjct: 36  MKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEA 95

Query: 61  ESLSDHQDICCITAPVHQGTSLPPTDLSDCYEEDRSDRGLGAIAIDCVMAGGGSDGALDI 120
            +L++H++ C ++ P   GTS      S       +   L A+A+DC M GGG+DG +D 
Sbjct: 96  FALAEHKNKCHLSPPRPLGTSTQRNPSSSL-----AGSRLKAMALDCEMVGGGADGTIDQ 155

Query: 121 CVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLNG 180
           C  +CLVD+DE +IF+T VQP +P+T+YRHE+TGL +E ++  MPL++V+E+V   L  G
Sbjct: 156 CASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGG 215

Query: 181 ESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYLT 231
           ++ G  RL      LLVGHDL HD+ CL+L YP H+LRDTA+Y PLMKTNLVS SLKYLT
Sbjct: 216 QNDGAGRL------LLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLT 269

[Close]

BLAST of CSPI04G17080 vs. TAIR 10
Match: AT3G27970.1 (Exonuclease family protein )

HSP 1 Score: 244.6 bits (623), Expect = 7.9e-65
Identity = 120/246 (48.78%), Postives = 168/246 (68.29%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLME-------------QGCGLCLRVLDGPES 60
           M++SYHS H+P CGVC KHC+SFESLREHL+              +GC  C+ +L+ P S
Sbjct: 34  MKISYHSGHEPTCGVCKKHCRSFESLREHLIGPLPKQECKNIFSLRGCRFCMTILESPNS 93

Query: 61  LSDHQDICCITAPVHQG--TSLPPTDLSDCYEED-RSDRGLGAIAIDCVMAGGGSDGALD 120
              HQ+ C  ++ V+ G  T +    L D    D  S R    +A+ C M GGGSDG+LD
Sbjct: 94  RRIHQERCQFSS-VNSGLTTRMAALGLRDKAMIDYTSSRSPRVVALSCKMVGGGSDGSLD 153

Query: 121 ICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLN 180
           +C  +C+ DE + +IF+T+V+P + +T+YR+E TG++ E++R AMPLK VQ K+ + L N
Sbjct: 154 LCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRPENLRDAMPLKQVQRKIQEFLCN 213

Query: 181 GESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYL 231
           GE + ++R  GGKA++LVGH L+HDLD L+L YP  M+RDTA+Y PLMKT+ +S+SLKYL
Sbjct: 214 GEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMIRDTAKYPPLMKTSKLSNSLKYL 273

[Close]

BLAST of CSPI04G17080 vs. TAIR 10
Match: AT5G40310.1 (Exonuclease family protein )

HSP 1 Score: 233.8 bits (595), Expect = 1.4e-61
Identity = 114/246 (46.34%), Postives = 165/246 (67.07%), Query Frame = 0


Query: 1   MRVSYHSVHQPRCGVCLKHCKSFESLREHLME-------------QGCGLCLRVLDGPES 60
           MR+SYHSVH+P CG+C KHC+SF+SLREHL+              +GC  CL +L+ P +
Sbjct: 25  MRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQECKNIFSIRGCRFCLTILESPNA 84

Query: 61  LSDHQDICCITAPVHQGTSLPPTDL---SDCYEEDRSDRGLGAIAIDCVMAGGGSDGALD 120
              HQ+ C + + V  G  +    L   ++   +  S R    +A+ C M GGGSDG+LD
Sbjct: 85  RRIHQERCQL-SNVTSGLMIRMAALGLRNNSTIDYTSSRSPRVVALSCKMVGGGSDGSLD 144

Query: 121 ICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKNVQEKVLKLLLN 180
           +C  +C+ DE E ++F+T+V+P IP+TNYR+E+TG++ E++R AM LK+ Q KV + L N
Sbjct: 145 LCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPENLRDAMRLKHAQRKVQEFLCN 204

Query: 181 GESIGRLRLNGGKAKLLVGHDLEHDLDCLRLNYPDHMLRDTARYHPLMKTNLVSHSLKYL 231
           GE + ++R   GKA++LVGH L++ LD L+L Y   M+RDTA Y PLMK++ +S+SLKYL
Sbjct: 205 GEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTAEYPPLMKSSKLSNSLKYL 264

The following BLAST results are available for this feature:

BLAST of CSPI04G17080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4IEV5	1.9e-15	34.72	RNA exonuclease 4 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9...	[more]
Q08237	1.6e-14	34.03	RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=55...	[more]
Q7S9B7	2.1e-14	31.48	RNA exonuclease 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708...	[more]
Q9GZR2	2.8e-14	32.19	RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2	[more]
Q4PER6	8.1e-14	31.90	RNA exonuclease 4 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=REX4 ...	[more]

BLAST of CSPI04G17080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYE9	6.4e-131	94.65	Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G338960...	[more]
A0A5D3BBM9	1.7e-128	92.18	RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G...	[more]
A0A5A7TPB9	1.7e-128	92.18	RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G001...	[more]
A0A5A7TYQ2	8.1e-126	92.83	RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3741G0...	[more]
A0A5D3BMN0	5.8e-124	93.04	RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G0...	[more]

BLAST of CSPI04G17080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142658.1	2.2e-133	100.00	apoptosis-enhancing nuclease isoform X2 [Cucumis sativus] >KGN54753.2 hypothetic...	[more]
XP_011653750.1	1.3e-130	94.65	apoptosis-enhancing nuclease isoform X1 [Cucumis sativus] >XP_011653752.1 apopto...	[more]
KAA0045030.1	3.6e-128	92.18	apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa]	[more]
TYJ96296.1	3.6e-128	92.18	apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0046505.1	1.7e-125	92.83	apoptosis-enhancing nuclease isoform X1 [Cucumis melo var. makuwa] >TYK01913.1 a...	[more]

BLAST of CSPI04G17080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G48100.1	3.8e-67	50.61	Exonuclease family protein	[more]
AT2G48100.2	3.8e-67	50.61	Exonuclease family protein	[more]
AT2G48100.3	3.8e-67	50.61	Exonuclease family protein	[more]
AT3G27970.1	7.9e-65	48.78	Exonuclease family protein	[more]
AT5G40310.1	1.4e-61	46.34	Exonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 99..243 e-value: 8.6E-8 score: 41.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 99..243 e-value: 2.0E-31 score: 110.9
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 1..243
None	No IPR available	PANTHER	PTHR12801:SF123	EXONUCLEASE FAMILY PROTEIN	coord: 1..243
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 101..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G17080.1	CSPI04G17080.1	mRNA
CSPI04G17080.2	CSPI04G17080.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003676	nucleic acid binding