CSPI04G16880 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCGTAATAAATATTAATGGTTGCTAAAAGATGAAAGAAGAAGAAGAAGAAGGAAATGGAGAAACACTTTTCTCCATCTACCTGTTTCCTACTCCAAAATTAATTTCAATTAGTTGAGAGTTAGAATAATCCCCCAATTTTTCAAATGTCTCCATAAATTCCCAATTTCTCACTATTCTTCTCCCAAAATCTGCCATGGAAATCGCTTCTTCCTCCTCCTCTTTAATCAAAGACCCCAAATCCACTCAATCCACCGCCGCCGCCGCCACCCGTTCCCGGAAACGCCGCAACACCTGCATCGGAATCTCCATCGCCATCCTCCTCCTTCTCATCATCATAATCATCATTCTCGCCTTCACAGTCTTCAAAGCCAAACGCCCAATCACCACCGTCAATTCCGTTGCCCTAGCCGATCTCGACGTGTCGCTAAACCTAGCCGGAGTCTCCGTCGACATCAACGTCACTCTAATCGCCGACATCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACAAGAACAGCACCGCGTTTTTGAATTACAGAGGGGAATTGGTCGGAGAAGCGCCGATTATGGCTGGAAAGATCGACGCGGGGGAGAGGAAGGAGATGAATATCACGCTGACGATTATGGCAGATCGATTACTGAAGACGACGACGGTTTTTACGGATGCGGTGGCGGGATCTATGCCGTTGAATACGTATACGAGGATTTCAGGTAAGGTGAAGATTTTGGGGATTTTTAATATTCATGTGGTTTCAAGTACGTCTTGTGATTTCAATGTGGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGATTGATTGATTGATAGATACAGCTTCTTCTTGTTTTGTTCTTAGTAAATTATGAAAGAGATTTGTAGGTTGAATTAGGGATGTTTTATAGAGGGTTGTAATTGATTGATTTGGTACTTAGTTACTATTCTTGTACTAAACTTCCCTCTCTCAATGGTTGTTATTTTCTTAATGTTAAATTACAAGTTTAATCCTAAATGGTGAGCATCAATACCATCGGTAATCCATTTTTTAACCA GGCGTAATAAATATTAATGGTTGCTAAAAGATGAAAGAAGAAGAAGAAGAAGGAAATGGAGAAACACTTTTCTCCATCTACCTGTTTCCTACTCCAAAATTAATTTCAATTAGTTGAGAGTTAGAATAATCCCCCAATTTTTCAAATGTCTCCATAAATTCCCAATTTCTCACTATTCTTCTCCCAAAATCTGCCATGGAAATCGCTTCTTCCTCCTCCTCTTTAATCAAAGACCCCAAATCCACTCAATCCACCGCCGCCGCCGCCACCCGTTCCCGGAAACGCCGCAACACCTGCATCGGAATCTCCATCGCCATCCTCCTCCTTCTCATCATCATAATCATCATTCTCGCCTTCACAGTCTTCAAAGCCAAACGCCCAATCACCACCGTCAATTCCGTTGCCCTAGCCGATCTCGACGTGTCGCTAAACCTAGCCGGAGTCTCCGTCGACATCAACGTCACTCTAATCGCCGACATCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACAAGAACAGCACCGCGTTTTTGAATTACAGAGGGGAATTGGTCGGAGAAGCGCCGATTATGGCTGGAAAGATCGACGCGGGGGAGAGGAAGGAGATGAATATCACGCTGACGATTATGGCAGATCGATTACTGAAGACGACGACGGTTTTTACGGATGCGGTGGCGGGATCTATGCCGTTGAATACGTATACGAGGATTTCAGGTAAGGTGAAGATTTTGGGGATTTTTAATATTCATGTGGTTTCAAGTACGTCTTGTGATTTCAATGTGGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGATTGATTGATTGATAGATACAGCTTCTTCTTGTTTTGTTCTTAGTAAATTATGAAAGAGATTTGTAGGTTGAATTAGGGATGTTTTATAGAGGGTTGTAATTGATTGATTTGGTACTTAGTTACTATTCTTGTACTAAACTTCCCTCTCTCAATGGTTGTTATTTTCTTAATGTTAAATTACAAGTTTAATCCTAAATGGTGAGCATCAATACCATCGGTAATCCATTTTTTAACCA ATGGAAATCGCTTCTTCCTCCTCCTCTTTAATCAAAGACCCCAAATCCACTCAATCCACCGCCGCCGCCGCCACCCGTTCCCGGAAACGCCGCAACACCTGCATCGGAATCTCCATCGCCATCCTCCTCCTTCTCATCATCATAATCATCATTCTCGCCTTCACAGTCTTCAAAGCCAAACGCCCAATCACCACCGTCAATTCCGTTGCCCTAGCCGATCTCGACGTGTCGCTAAACCTAGCCGGAGTCTCCGTCGACATCAACGTCACTCTAATCGCCGACATCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACAAGAACAGCACCGCGTTTTTGAATTACAGAGGGGAATTGGTCGGAGAAGCGCCGATTATGGCTGGAAAGATCGACGCGGGGGAGAGGAAGGAGATGAATATCACGCTGACGATTATGGCAGATCGATTACTGAAGACGACGACGGTTTTTACGGATGCGGTGGCGGGATCTATGCCGTTGAATACGTATACGAGGATTTCAGGTAAGGTGAAGATTTTGGGGATTTTTAATATTCATGTGGTTTCAAGTACGTCTTGTGATTTCAATGTGGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGA MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAKRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKILGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI* Homology
BLAST of CSPI04G16880 vs. ExPASy TrEMBL
Match: A0A0A0L094 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 3.9e-106 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of CSPI04G16880 vs. ExPASy TrEMBL
Match: A0A1S3CJB5 (uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 6.0e-99 Identity = 204/216 (94.44%), Postives = 208/216 (96.30%), Query Frame = 0
BLAST of CSPI04G16880 vs. ExPASy TrEMBL
Match: A0A6J1HS80 (uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 1.1e-76 Identity = 157/215 (73.02%), Postives = 187/215 (86.98%), Query Frame = 0
BLAST of CSPI04G16880 vs. ExPASy TrEMBL
Match: A0A6J1DQ35 (uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023175 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 5.5e-76 Identity = 163/216 (75.46%), Postives = 185/216 (85.65%), Query Frame = 0
BLAST of CSPI04G16880 vs. ExPASy TrEMBL
Match: A0A6J1EAI5 (uncharacterized protein LOC111432307 OS=Cucurbita moschata OX=3662 GN=LOC111432307 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 1.6e-75 Identity = 155/215 (72.09%), Postives = 185/215 (86.05%), Query Frame = 0
BLAST of CSPI04G16880 vs. NCBI nr
Match: XP_004142665.1 (uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical protein Csa_012636 [Cucumis sativus]) HSP 1 Score: 394.0 bits (1011), Expect = 8.1e-106 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of CSPI04G16880 vs. NCBI nr
Match: XP_008463309.1 (PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo]) HSP 1 Score: 370.2 bits (949), Expect = 1.2e-98 Identity = 204/216 (94.44%), Postives = 208/216 (96.30%), Query Frame = 0
BLAST of CSPI04G16880 vs. NCBI nr
Match: XP_038882665.1 (uncharacterized protein LOC120073854 [Benincasa hispida]) HSP 1 Score: 342.4 bits (877), Expect = 2.8e-90 Identity = 184/215 (85.58%), Postives = 201/215 (93.49%), Query Frame = 0
BLAST of CSPI04G16880 vs. NCBI nr
Match: XP_023518218.1 (uncharacterized protein LOC111781758 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 298.9 bits (764), Expect = 3.5e-77 Identity = 159/215 (73.95%), Postives = 188/215 (87.44%), Query Frame = 0
BLAST of CSPI04G16880 vs. NCBI nr
Match: XP_022966458.1 (uncharacterized protein LOC111466106 [Cucurbita maxima]) HSP 1 Score: 296.2 bits (757), Expect = 2.3e-76 Identity = 157/215 (73.02%), Postives = 187/215 (86.98%), Query Frame = 0
BLAST of CSPI04G16880 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 181.8 bits (460), Expect = 5.9e-46 Identity = 93/203 (45.81%), Postives = 144/203 (70.94%), Query Frame = 0
BLAST of CSPI04G16880 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21 Identity = 69/199 (34.67%), Postives = 105/199 (52.76%), Query Frame = 0
BLAST of CSPI04G16880 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 71.6 bits (174), Expect = 8.5e-13 Identity = 51/188 (27.13%), Postives = 88/188 (46.81%), Query Frame = 0
BLAST of CSPI04G16880 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family ) HSP 1 Score: 62.0 bits (149), Expect = 6.8e-10 Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of CSPI04G16880 vs. TAIR 10
Match: AT2G01080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 45.4 bits (106), Expect = 6.6e-05 Identity = 51/223 (22.87%), Postives = 99/223 (44.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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