CSPI04G16830 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G16830
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type domain-containing protein
Location	Chr4: 14201273 .. 14209423 (+)
RNA-Seq Expression	CSPI04G16830
Synteny	CSPI04G16830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGGACCAACCTATGATGTATCGATCATATGGACCGAACCAAGTGAGTTCTTCCAATTTCAACAGAGGAAAATTTGCATTCTTTTGATTTTTCTGGCTTGTATTCCACGTATGATTGGCAGCAACAAATAGATTGTAATAGAAATAAAGGTATCAAATTTCAAGCCTGTTTGAAATTGCGATCGGATTTTGATAATGGAGAGCTGACCTTCTTTCTTCCTTTACCCCTTGATTTTTTCCCCTTTTTCTCTTGTTCGCTCTCTTGCCCTTCTTCCCTCAAGCTTTATAGGGCTCAAATTTCTGCCATTTCTGTTCATCATCACCATCGAAACCCCATCAAGGCTTTTTTTTTTTCCTTATTCTTTCATCTTCTTTCCCATCACCCTTCTTTTACTGCCACCATTTTCATCCATTTATCCAATCAAACCCCTCCCTCTTTCACCCCTTTTCATGATTCGCCGGTTTCTTTGACCTTTTTTAATCCGATGATCGTGCCCCACTTGCTTGATTTTTGATTCAGTATTGTTATTGTGTTCTTGTTGTTGCTAGAAGTACTTTTGATTTGATATTGTTATCTGGGTTGTTGCCATGTGATGATTTTCTTTTTCTTTATCTGAGGTTCTCCACGGAGTCTCGTTTGCGGAGAAGGTAATTTCAAGTTCTGTTTCTTTTACTGGTTCTTGATAGTTTTTATTGCCCATTTCTTGTAGCTTTCAACTTCATTATCTTTAGATTGCTTCTTTTACAAGGAAATTTGTCTTCCCTCTTCATGTTAGGGTCAAATTTTTCGTATGTTGTTGAATTGATTGTCAAGAATGTTATGATGATTAGGGTTAGGCCATTCACCCGAATGGAAGGGTCTGGTAGCGACCCCGACTCTCATAGAGCTGCTTCCACCAGTGGTAGTTCAAGAAGGTTTGGAATGTTAGCTGCCTCAAATATTATTCAGGCTCCGCTTTCTGCACTATTAGAGTATTCGGGTCTTCTTCGTGGCCGTCAAAGTCATCAAGAATCAGAGGCATTGATAAGTGCTCGACTGCCTTCGGGGTTTCGAGACCATCTTCGCAGCCATATTGAAGAATCTTCGGGTGCCACCAATGATGGAGAGGTTTCGATTAGGATAATTGGGGCAGGGGAACCAGAACATGGTAGGGATGGTGCTGGACTAGTAGTTGGGCAAGCGAGGGATGTTAGTGGTCAGAATGCGGTGTCTTTGCAATCTGTTTCAGGGTTGGCTTCTGTGACCTTGGGGTCGGAGCTTAGCCAGGGTGAGTCTGCCAATGAACGCGGTGCAAGAGAGGGTATTCCTGAATCGATAAATGCAGGTGCTGATGGAGATGCCTCGGAGGCAGCTGGAGGAAATAGCAGGGATTCTTCTTATCAGAGATATGACATTCAACAGGCTGCTCGGGGGATTGAGCAGATACTCCCATTTAGTTTTCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGTACCTGCCTTGACTTTATTCATGATCTTAAATTACTATGGGTTACCAAACATTTATTTACTTCCAATTTTAAGTTGTCATTAATGTGGCTGGATTATGGGCAATCATGAACTACTGCATTGTCTTTATGGAGCAAGCATATGTGCTCTTTAGCTTTATTGTCTTTGATCGTTTTCTATGAAAAAAAAAGCTGAATAAAGTTGAATGAAATTCTTGAAATATCACGGAAATTTTGAAAATCAATGGAATTTAACTTTTATGATCACTTGGTGACTTTCCTATTACCAAATGCAATTGAAAATAGAAAAGCGAACAAACGAACGAGCAGAATTTACAAACTGTCAACTTGGGAAAAAATAATCTTCCAATATACAATCAATGTTGTATTAACAGTAGTGAAAACTCAACCTATCAAAGTAAACCAAGAATTATACCTCATTTAAATTTCTATAAACTCTAAAATTTTGAAGTATAGTGCATGAAGATAGGAATAGACAAACTGACAAATTACTTAATAATTAAGATCAAACTTTTTTATCCATAAAGATTAATGTGAAGCTCATATCATCTACTTCATCATGTTTTCAAGGGTTAAAATAAAATTTAACTGATGAATTGAGATGTAAACTTCCCTTGTACAAAAATCCATGAACAAGGATATTAGTTCTTTTTTTGTTAGATTCTCAAATTTAGATATAAACTTGTGCATTGTTAGTCATTTTGTTATATTCTTGTATTAGTTTACTTATTTACTTTTAATAATTATATTGTCTTTTTAACTAATTTAATATCAATTTATCAAATCATGATCTTGATGCTAATTATTGGTCATTTTTTGGGGGGTTTAATCCTTTGTGGTTTTGATGCTAACTATTAATGTTTAAGCTTTTTCTGGCTTATATGCAAAATTTACATGTGTTTCCTTGAGAGATATTTAGTTGTATTTATGTGTTTATTATATTGTAGCTCAGATGAACTTAACATCATCTGTATCAAACTAATCCAATTCTCAGAAATTGAAGCATGTAAATATCTTTCCCTTTGTTAAGATACCTCAGAGTTTTTTTTTCTTCTCTCTTGAAGAGTTAGTTGTGTCAAGGTGATTTAGATGTTGAACAACAAGAACGTAAAAGCCAATAAATTTTTAGTTAAAATTAAAATTTAGAATGAAAGAAAGGAAAAGAAGTAGAATCAAAAGTCTATCACCTTTAATCAATATTTGATTTGACACAGAACTGATTATAACGTAAAGTCAGATATAGAAATATTTAAGAATGCTTTCGTTATTTTGTTTTTACATTTATAAAAGATTAAATTGTTTTAATATTACATGTCTCCACATATATTTCTCTATGATTTCTTCTTCTGGTGTTGATACTTGTGCCCTAAACGTGCAGGCTTCTTTGTGACAATATGGATCGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGTGTGTTAAAGCATATTTTAATGTTTGGGTTCCTTGCAGGCTTTTTTTTTGTGTGTGTGTGTCTGTATGTTGGAGTATGAAACAGAAGGAAAGTAGGACGTAAAAATATCCTACGCTGGCATTGGTTAATAGGTTCCTATGTGAACCATAAATGGCTTGATGAGAATGCGTTCAAGCAATGATGACCACCTACTTAGAATTTATTACTCAGTATCCTACAAGTTACTTATTACACGAACACATGTATTATTTTAATGAATAACCAATGTTTCATTGATGGAAATAAATATATTGTAGAGGTAAAAATGGGTTGGTCTAGAGGTAAAAATGGAAATATAGTCTCAATAACTAATTAAAAATATCCTACGCTACCTACCTACGAGTTTCCTTAACACCCAAATGTTGTAGGGTCAGACGGTTGTCTCGTGAGATTAGTTAAGGTGCACAAATGTTGAACTCATGATCGACACCACACCCAAAGGAAATTTCCCAAATGTTGTACCTACGAGTTTCCTTGACACCCAAATGTTGTAGGGTCAGACAGTTGTCTCGTGAGATTAGTCGAGCTGCACATAAGCTGACCAAATTTCTACAAATTACTTGACAATCAAACTTGATAGACTTAGGCAGTTTTCCCATGAGAATAGTCAAGGTGCAAGCTGGCGTTGGGGCACTTGAAAATATAAACAAAACTTTCATTTAATATATGTATAGATTTTATATTTTTATATAAAAACTATTATTATTATTATTTGTTTAAAGAAGTGAAGAAGGTAAGTGCCATTAGGAGATTACAAGAAGGTCTATGTGGATAAGTTAACATCGATGATAAGTCACACTTTATTATTTGGTATCTTGAAGAGTCATGAAAGTTAAAGCCCAAGACATCCTCAAATTTCACCCTTTCCAGCTTAAGCTACCTTAAACAGGAAAACTTTGATGAGCCTAAGCTTCCTTTTATATCAGAGGTTTGGACATGTGTCTGGGGCTACTTTATATTAGAGAAATGTGGGCATCTAGAGCTACAAAACTATTTTTCTTTTGATGCGATAGAGCTACAAAACTATAATATCTACGTCCATGTTTTAGCATCAGCTGCCTCGTCAATTGAAATGGTGTGATCCCCCTTTCCTTAACTCTTTCATGGTGGTTGGATTTTATTTTCCTCTATCTGAAGTTATTCAGCCCATTTCTTAATAGTTTTGCTCCCCGAAATCCCCAGTCAACCCTTATTCCATCACTATAGCTATTTCAATCTCCTTTCAATTTGTAAGGTCTTTTGTAATCTCTCTATTGGGCTCCCCTTTTGTAATTTCATACCATCAACAGAATCATTTGCCTTCTTAAGATTGAGTATAGACCAGGCCATTCACAGGGTAGACTTTCTTATACTTACTCGTTCTGCCCTCCCAGTTAGGGATGGGTTTAAAACTTTTGTCCTGAAACAAATTCGTTTTGATTATCAGAAATAGTATCCTGAATCACTCTACTTGTTAGTTTGGCTAATACCTGATCACTTTATATATGGCAATGACCAATCTTGCTGTACTGTTCCTGTTGTTTTTTCTTTATTCCATTTTTCTAAACATGGGCTTTATTGGTGTTCCTGCAGGGAGAGAGAAAAATTTCTGTTTTGGTTTGCATTTCTCTTGCGTTCACTATTCATGTTATTGGTGTGTACTGGTGGTATCAGAATGATGACCTTTTATATCCGTTGATCATGTGTCCTCCCAGAGCGATTCCTCCTTTCTGGCATGCTATTTTCATCATTATGGTGAATGGTAACCTTCTGTTAAAGTTTTTACTGATTATTAGTGTATGTTCACCGATCATAATCTATACATGTTATATTGACAAAGAAGTGCTTTTACTAACTATGCTAGACTGCCTAGTCACATAATTTTCTTCAAATTATTTATTTTCTCAAATTTTCTCTGACTGATAGTTATTTATTTATTTTAATTGGAGACTTAAAACACTTCATTCAATAAACAAAAAACAAAAGAGGATAACCTAACTGGCAAAGGCCAAGGGTTAAAGAAACACTTTCCTATCAAATTAAAGTGTAACAATTATAAAAAGACTTCTGTTGACTACACTACACCAGTTGAAAGCCTTAAACTTTACAAGATCAGAAAAGTATAAAAAGAATTGACTTAGTATTTTTTTTTTAATTTTCTAGATCTACTTGCTTAAAAATGAATACTGCATTTATGTCAGTATCTTACTAGTTACTACTGATTAAATTGTTTTTAGTTATGCCTTTTAGTTTTGCTTTCTAATTTATGAAAGTAAATCACAAACGATTTTTTTGGTAACTAATTAGGTTAAATATATGATTTTGTGTTGGTTTCTCAGACACTTTGGTCCGTCAGGCAGTGATGGTGGTCAAGTGTGTTCTATTGATGTATTACAAGAACAGTAGAGGTCGCAATTATCGTAAACAGGTGGGATAACATAGAAGTTGGCTCTTTTGTATACTTCATGAAAGACTTCTTTTGGATTCAGTAACAAATATCCTTTTATTGAGCTCATTGTTTATTTCTCTTTAAAAAAAGTGGCAAATTTAGAATTTGCAAATGTTTTGTCAGTCTGTGAGTATGCACCTAAAATCCACAGTTTCTCCAGGGTCAAATGCTAACTTTGGTCGAATATTTGCTACTACTGTACCGTGCCTTATTGCCTACTCCTGTTTGGTATCGTTTCTTCTTGAACAAAGAGTATGGGAGTCTATTTTCGTCACTATTGACGGGACTATACTTAACTTTCAAGCTCACATCTGTTGTTGAAAAGGTAAGTTTTCTATTACTTTTTGAACTCATTTTGACTATTATATTCTGTCACCAGATGGTCTCTCTGTTATCTCCCTTCCCTGTCTCACTTTTCTTTTTGATGTGGAATTCAGGTGCAATCCTTCTTTGCTGCTTTGAAAGCACTGTCACGTAAAGAGGTGCATTATGGGGCATATGCAACATCAGAGCAGGTAAATTGAATCTCATTTATGCATGCCTTTCTCCAGTCGACTAAACTTTTTTACTGCAGGATGCCATTTATATTTTCCTTTTAATGCATTTTATTTTACTTTTCTGGGAATCCTTGAGTGTCTTTGCTGCATCTTAACTCATCTCAGGACGTTTGCATTTAACGAAATATTGCAAGCATCTTAAATTTGTAGGTTTATTTTCATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATCAATTGAGTTTCGATAACGCAACCATGGATTCAGTTTTAAGCCATAAAAGCTGTTTTGTGGGATATTTGTTTGGAAGGAAAGCAAAAAACTTTTTAGGAAAGACCCTTGGGGGTGGAATGAAAAGTCTTGCAGGTTTGTGGACTGCAATTCTAGGTTCTCTTTGTATTTAGTCTTATAATGTATTCTCTTCTAGACTTTGTTGGTTTGTTTATTTGTTTTTCTTTGTGTGTTCTCTTTGGATGAGGGATTGAACCATCAATTTTTGAATGGTAATATGTTCTTTGACCACTTGAGTTCTATGCTCATGTTGGTGTCATCCCTTCTAGTTGGGGGCGACTTTCATCATAATTTTGGTCGTTTTCTCTCCTTCAGTAGTCTGTACTCTGTAGTGGTTCCTTCAAACTTTTCCTATAGGCAGATTGGTTGCTGGCGAATTTGTAATTTTTTTAAAAATGATAATAACAACAACAATAATAACAATAATAGAATAATAATATCAATAATAAAAATAACAACAAGAATAACAACAACAAGAATAATAATAAGAATAAGAATAACAACAACAACAACAACAACAAAAAGGAACAGAACAAAATATCCTTGACATCTAACTTGTTATTTGCCTAATTCAGGTCAGCGCAGCAGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTTCTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAATGGTATGTTTATTGCATGAAATTCTCCCATGCTTCATACTCTCACAATCTATATGTTGTACTGATCATTTGCTAAGAGGTTGATTTCAATTTCAGTTATCCAGCACTAAAGGTTTCCTCATCTTATGGTGTGGAGCCTTAAAGTTCGACCATTTGTGATTTCCAATGGTTAAACTATCACATCTTTGGTTTTTTCAATGTGTGAAACACAACTTACTTACTAATAGTGTTCAATTGTCGAATGTTATAGACATAGCTTAGTGGATGAGAAATTCTGCGGAGTTGGGACTTGATAACAAGGGTAATATGGTAATTAGTGGGGGTAGTTTTTGTAAGGGAATAATTGTTGTAAGTAGATGGATAGAGATGGGAGAAGGCAATCCAACATCGGGGTGGTTTAATCTTGAGCAAACTTAGATGATGTACTTCGAATTACTTGGTATTTTGATTTTCGAGTCTTGTTATCTTGTTCCAAACTAGATTTCAAACAAAACTAGCATTTTTTGTCCTACTTCTATTAACCAGGACTTCGGAACTAAAACGTCCAAAGGAAGGAGAATGGGGGCAAATAAATGCCAACTTACCTACCTTTAGTGTTCTTAATATATTGTTCACTTTGATACCAATTTTGGACTGGTTGGTGCTATGTGCAGGTTTGAGCGGGAACGGACATGTCCATTGTGTAGGGCGTTGGTTAAACCCGCAGATCTGAGGTCATTTGGTGATGGATCAACAAGTTTGTTTTTCCAGGTTTTCTAAGCCATTTACTTCAAAGCCCCTCAGAAGGCTTTGTAGTTTGAAGAGGTGAAGGGAAGCCAGCCAATTGCATTTGTTTACCCCTACACAAAATTGTACATCTAACTAAATACTGTGTAGCTGCTGCCAATTGAGGAAGCAAAAGACTGGGGCTTGTGAAGTTGGAAAGGCAAATTCAAAATCGACATTTATACATATTATAGTCCTTTTTGTGCTACAGCAAAGAACGGTGGATGTTCGAGAGGAGTTTAACCCTTCTATGAAAATTTTATGAATTGTGATTCTGGGGTGTAAATTTATTAGCAAAGCCAGTTTGCTGTGTTGTCGATTTTATAATTTAGTCCAAATGCATATAATGAGAATGTTTTGGACTCTTAGTAATTGTTATATACACATACACAGTGTCAGACATGTCTTTTGGCTCTTCAGTCTGTGCTTTTGTTTGATTTGAAAATTAAGAAAGGAAGTGAATATGATG

mRNA sequence

AATTGGACCAACCTATGATGTATCGATCATATGGACCGAACCAAGTGAGTTCTTCCAATTTCAACAGAGGAAAATTTGCATTCTTTTGATTTTTCTGGCTTGTATTCCACGTATGATTGGCAGCAACAAATAGATTGTAATAGAAATAAAGGTATCAAATTTCAAGCCTGTTTGAAATTGCGATCGGATTTTGATAATGGAGAGCTGACCTTCTTTCTTCCTTTACCCCTTGATTTTTTCCCCTTTTTCTCTTGTTCGCTCTCTTGCCCTTCTTCCCTCAAGCTTTATAGGGCTCAAATTTCTGCCATTTCTGTTCATCATCACCATCGAAACCCCATCAAGGCTTTTTTTTTTTCCTTATTCTTTCATCTTCTTTCCCATCACCCTTCTTTTACTGCCACCATTTTCATCCATTTATCCAATCAAACCCCTCCCTCTTTCACCCCTTTTCATGATTCGCCGGTTTCTTTGACCTTTTTTAATCCGATGATCGTGCCCCACTTGCTTGATTTTTGATTCAGTATTGTTATTGTGTTCTTGTTGTTGCTAGAAGTACTTTTGATTTGATATTGTTATCTGGGTTGTTGCCATGTGATGATTTTCTTTTTCTTTATCTGAGGTTCTCCACGGAGTCTCGTTTGCGGAGAAGGGTTAGGCCATTCACCCGAATGGAAGGGTCTGGTAGCGACCCCGACTCTCATAGAGCTGCTTCCACCAGTGGTAGTTCAAGAAGGTTTGGAATGTTAGCTGCCTCAAATATTATTCAGGCTCCGCTTTCTGCACTATTAGAGTATTCGGGTCTTCTTCGTGGCCGTCAAAGTCATCAAGAATCAGAGGCATTGATAAGTGCTCGACTGCCTTCGGGGTTTCGAGACCATCTTCGCAGCCATATTGAAGAATCTTCGGGTGCCACCAATGATGGAGAGGTTTCGATTAGGATAATTGGGGCAGGGGAACCAGAACATGGTAGGGATGGTGCTGGACTAGTAGTTGGGCAAGCGAGGGATGTTAGTGGTCAGAATGCGGTGTCTTTGCAATCTGTTTCAGGGTTGGCTTCTGTGACCTTGGGGTCGGAGCTTAGCCAGGGTGAGTCTGCCAATGAACGCGGTGCAAGAGAGGGTATTCCTGAATCGATAAATGCAGGTGCTGATGGAGATGCCTCGGAGGCAGCTGGAGGAAATAGCAGGGATTCTTCTTATCAGAGATATGACATTCAACAGGCTGCTCGGGGGATTGAGCAGATACTCCCATTTAGTTTTCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACAATATGGATCGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGGAGAGAGAAAAATTTCTGTTTTGGTTTGCATTTCTCTTGCGTTCACTATTCATGTTATTGGTGTGTACTGGTGGTATCAGAATGATGACCTTTTATATCCGTTGATCATGTGTCCTCCCAGAGCGATTCCTCCTTTCTGGCATGCTATTTTCATCATTATGGTGAATGACACTTTGGTCCGTCAGGCAGTGATGGTGGTCAAGTGTGTTCTATTGATGTATTACAAGAACAGTAGAGGTCGCAATTATCGTAAACAGGGTCAAATGCTAACTTTGGTCGAATATTTGCTACTACTGTACCGTGCCTTATTGCCTACTCCTGTTTGGTATCGTTTCTTCTTGAACAAAGAGTATGGGAGTCTATTTTCGTCACTATTGACGGGACTATACTTAACTTTCAAGCTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCTTTGAAAGCACTGTCACGTAAAGAGGTGCATTATGGGGCATATGCAACATCAGAGCAGGTCAGCGCAGCAGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTTCTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAATGGTTTGAGCGGGAACGGACATGTCCATTGTGTAGGGCGTTGGTTAAACCCGCAGATCTGAGGTCATTTGGTGATGGATCAACAAGTTTGTTTTTCCAGGTTTTCTAAGCCATTTACTTCAAAGCCCCTCAGAAGGCTTTGTAGTTTGAAGAGGTGAAGGGAAGCCAGCCAATTGCATTTGTTTACCCCTACACAAAATTGTACATCTAACTAAATACTGTGTAGCTGCTGCCAATTGAGGAAGCAAAAGACTGGGGCTTGTGAAGTTGGAAAGGCAAATTCAAAATCGACATTTATACATATTATAGTCCTTTTTGTGCTACAGCAAAGAACGGTGGATGTTCGAGAGGAGTTTAACCCTTCTATGAAAATTTTATGAATTGTGATTCTGGGGTGTAAATTTATTAGCAAAGCCAGTTTGCTGTGTTGTCGATTTTATAATTTAGTCCAAATGCATATAATGAGAATGTTTTGGACTCTTAGTAATTGTTATATACACATACACAGTGTCAGACATGTCTTTTGGCTCTTCAGTCTGTGCTTTTGTTTGATTTGAAAATTAAGAAAGGAAGTGAATATGATG

Coding sequence (CDS)

ATGGAAGGGTCTGGTAGCGACCCCGACTCTCATAGAGCTGCTTCCACCAGTGGTAGTTCAAGAAGGTTTGGAATGTTAGCTGCCTCAAATATTATTCAGGCTCCGCTTTCTGCACTATTAGAGTATTCGGGTCTTCTTCGTGGCCGTCAAAGTCATCAAGAATCAGAGGCATTGATAAGTGCTCGACTGCCTTCGGGGTTTCGAGACCATCTTCGCAGCCATATTGAAGAATCTTCGGGTGCCACCAATGATGGAGAGGTTTCGATTAGGATAATTGGGGCAGGGGAACCAGAACATGGTAGGGATGGTGCTGGACTAGTAGTTGGGCAAGCGAGGGATGTTAGTGGTCAGAATGCGGTGTCTTTGCAATCTGTTTCAGGGTTGGCTTCTGTGACCTTGGGGTCGGAGCTTAGCCAGGGTGAGTCTGCCAATGAACGCGGTGCAAGAGAGGGTATTCCTGAATCGATAAATGCAGGTGCTGATGGAGATGCCTCGGAGGCAGCTGGAGGAAATAGCAGGGATTCTTCTTATCAGAGATATGACATTCAACAGGCTGCTCGGGGGATTGAGCAGATACTCCCATTTAGTTTTCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACAATATGGATCGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGGAGAGAGAAAAATTTCTGTTTTGGTTTGCATTTCTCTTGCGTTCACTATTCATGTTATTGGTGTGTACTGGTGGTATCAGAATGATGACCTTTTATATCCGTTGATCATGTGTCCTCCCAGAGCGATTCCTCCTTTCTGGCATGCTATTTTCATCATTATGGTGAATGACACTTTGGTCCGTCAGGCAGTGATGGTGGTCAAGTGTGTTCTATTGATGTATTACAAGAACAGTAGAGGTCGCAATTATCGTAAACAGGGTCAAATGCTAACTTTGGTCGAATATTTGCTACTACTGTACCGTGCCTTATTGCCTACTCCTGTTTGGTATCGTTTCTTCTTGAACAAAGAGTATGGGAGTCTATTTTCGTCACTATTGACGGGACTATACTTAACTTTCAAGCTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCTTTGAAAGCACTGTCACGTAAAGAGGTGCATTATGGGGCATATGCAACATCAGAGCAGGTCAGCGCAGCAGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTTCTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAATGGTTTGAGCGGGAACGGACATGTCCATTGTGTAGGGCGTTGGTTAAACCCGCAGATCTGAGGTCATTTGGTGATGGATCAACAAGTTTGTTTTTCCAGGTTTTCTAA

Protein sequence

MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALISARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAVSLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF*

Homology

[Close]

BLAST of CSPI04G16830 vs. ExPASy Swiss-Prot
Match: Q96EX2 (RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RNFT2 PE=2 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 3.4e-35
Identity = 90/286 (31.47%), Postives = 157/286 (54.90%), Query Frame = 0


Query: 189 IEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVCISL 248
           +++ LPF  +LL     QH  G  V I +A+    +N  LR+Q +LK +R + V++ I  
Sbjct: 163 LQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILA 222

Query: 249 AFTIHVIGVYWWYQNDDLLYPLIMCPPR-AIPPFWHAIFIIMVNDTLVRQAVMVVKCVLL 308
               + + V + + +  L   LI   P   +  F+  ++I+ + D +++   + +KC+++
Sbjct: 223 FLAGNTLYVLYTFSSQQLYNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIV 282

Query: 309 MYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF--SSLLTGLY 368
              K       + +G+   ++E L  L+R+L+P  +WY++ +  +  + +    +L  LY
Sbjct: 283 ALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLY 342

Query: 369 LTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRC 428
              K   +  +V     ALK L   + +YG  AT +Q + AGD+CAICQ +   P++L C
Sbjct: 343 SLCKSFDICGRVGGVRKALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAEFREPLILLC 402

Query: 429 KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           +H+FCE+C+  W +RERTCPLCR+ V    LR + DG+TS  FQV+
Sbjct: 403 QHVFCEECLCLWLDRERTCPLCRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of CSPI04G16830 vs. ExPASy Swiss-Prot
Match: Q5RAG4 (RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=9601 GN=RNFT2 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 8.4e-34
Identity = 89/286 (31.12%), Postives = 155/286 (54.20%), Query Frame = 0


Query: 189 IEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVCISL 248
           +++ LPF  +LL     QH  G  V I +A+    +N  LR+Q +LK +R + V++ I  
Sbjct: 163 LQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILA 222

Query: 249 AFTIHVIGVYWWYQNDDLLYPLIMCPPR-AIPPFWHAIFIIMVNDTLVRQAVMVVKCVLL 308
               + + V + + +  L   LI   P      F+  ++I+ + D +++   + +KC+++
Sbjct: 223 FLAGNTLYVLYTFSSQQLYNSLIFLKPNLETLDFFDLLWIVGIADFVLKYITIALKCLIV 282

Query: 309 MYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF--SSLLTGLY 368
              K       + +G+   ++E L  L+R+L+P  +WY++ +  +  + +    +L  LY
Sbjct: 283 ALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLY 342

Query: 369 LTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRC 428
              K   +  +V     ALK L   + +YG  AT +Q + AGD+CAICQ +   P++L C
Sbjct: 343 SLCKSFDICGRVGGVRKALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAEFREPLILLC 402

Query: 429 KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           +H+FCE+C+  W +RERTCPL R+ V    LR + DG+TS  FQV+
Sbjct: 403 QHVFCEECLCLWLDRERTCPLSRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of CSPI04G16830 vs. ExPASy Swiss-Prot
Match: Q3UF64 (RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=10090 GN=Rnft2 PE=2 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 6.0e-32
Identity = 100/353 (28.33%), Postives = 174/353 (49.29%), Query Frame = 0


Query: 134 GSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRYDIQQAARG----- 193
           G   ++G + + R A        + G  G   +  GG+ R  S +  D Q          
Sbjct: 99  GGRSAEGSTYHHRQAHHHFHHGAHRG--GSLLQHVGGDHRGHSEEGVDEQPGTPAPALSE 158

Query: 194 -------IEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKIS 253
                  +++ LPF  +LL     QH  G  V I +A+    +N  LR+Q +LK +R + 
Sbjct: 159 LKAVISWLQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVL 218

Query: 254 VLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPR-AIPPFWHAIFIIMVNDTLVRQAVM 313
           V++ I      + + V + + +  L   LI   P      F+  ++I+ + D +++   +
Sbjct: 219 VILWILAFLAGNTMYVLYTFSSQQLYSSLIFLKPNLETLDFFDLLWIVGIADFVLKYITI 278

Query: 314 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF--S 373
            +KC+++   K       + +G+   ++E L  L+R+L+P  +WY++ +  +  + +   
Sbjct: 279 ALKCLIVALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLG 338

Query: 374 SLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMH 433
            +L  LY   K   +  +V     ALK L   + +YG  AT +Q + AG +CAICQ +  
Sbjct: 339 GVLIVLYSLCKSFDICGRVGGLRKALKLLCTSQ-NYGVRATGQQCTEAGAVCAICQAEFR 398

Query: 434 APILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
            P++L C+H+FCE+C+  W +RERTCPLCR+ V    LR + DG+TS   QV+
Sbjct: 399 DPMILLCQHVFCEECLCLWLDRERTCPLCRS-VAVDTLRCWKDGATSAHLQVY 445

[Close]

BLAST of CSPI04G16830 vs. ExPASy Swiss-Prot
Match: Q6NTV1 (E3 ubiquitin-protein ligase RNFT1 OS=Xenopus laevis OX=8355 GN=rnft1 PE=2 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 2.3e-31
Identity = 95/321 (29.60%), Postives = 164/321 (51.09%), Query Frame = 0


Query: 161 DGDASEAAGGNSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAF 220
           D    E A  +SR+ S    ++    + +E+  P+  +     + QH+ G  V I +   
Sbjct: 104 DASGPEDANDDSREQSNSISEVFHLYKWLEKSFPYILIFSAKLVVQHITGISVGIGLLTT 163

Query: 221 MYKSNDILRKQTALKGE-RKISVL-VCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAI 280
              +N  +  Q  L+ +  K+  L V + L F+  ++  Y+ + +  L Y L+   P   
Sbjct: 164 FLYANKCIVNQVFLRDKCSKLQCLWVLVFLLFSSFLL--YYTFSSQALYYSLVFMNPSLG 223

Query: 281 P-PFWHAIFIIMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRA 340
           P  F+ A++++ + D + +   M +KC++L+    S   +++ +G     +E L   Y  
Sbjct: 224 PLHFFDALWVVGITDFIGKFFFMGLKCIILLV--PSFVMSHKSKGYWYMALEELAQCYCT 283

Query: 341 LLPTPVWYRFFLNKEYGSL-------FSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRK 400
           L+ TPVW+R+ +  +YG+L       F  LL  LYL  K+  +  + ++    L+ L   
Sbjct: 284 LVSTPVWFRYLI--DYGNLDSGAEWHFGILLALLYLILKILIIFGQRKTSSDCLR-LFLS 343

Query: 401 EVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRAL 460
           + +YG  AT  Q S A  +CAICQ +   PI L C+H+FCE+C+S WF +E+TCPLCR L
Sbjct: 344 QPNYGTTATKRQCSEADGMCAICQAEFTKPIALICQHVFCEECISSWFNKEKTCPLCRTL 403

Query: 461 VKPADLRSFGDGSTSLFFQVF 472
           +       + DG+TSL  ++F
Sbjct: 404 ISNHS-HKWKDGATSLQLRIF 416

[Close]

BLAST of CSPI04G16830 vs. ExPASy Swiss-Prot
Match: Q5M7Z0 (E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 6.7e-31
Identity = 120/439 (27.33%), Postives = 199/439 (45.33%), Query Frame = 0


Query: 48  GRQSHQESEALISARLPSGFR----DHLRSHIEESSGATNDGE----VSIRIIGAGEPEH 107
           G +  Q  EA  S       R    +  + H    +G++ D      V  R+ G G   H
Sbjct: 16  GHERRQRPEAKTSGSEKKYLRAMQANRSQLHSPPGTGSSEDASTPQCVHTRLTGEGSCPH 75

Query: 108 GRDGAGLVVGQARDVSGQNAVSLQSVSGLASVTLGSELSQGESANERGAREGIPESINAG 167
             D   + +        +NA S    SG+ S   G   S+    +   AR          
Sbjct: 76  SGD-VHIQINSIPKECAENASSRNIRSGVHSCAHGCVHSRLRGHSHSEARL--------- 135

Query: 168 ADGDASEAAGGNSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTI-WIA 227
            D  A+E+    S   S  RY      + +++ LP+  +L V  + QH+ G  + I  + 
Sbjct: 136 TDDTAAESGDHGSSSFSEFRY----LFKWLQKSLPYILILSVKLVMQHITGISLGIGLLT 195

Query: 228 AFMYKSNDILRKQTALKGERKISVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAI 287
            FMY +  I+ +    +   KI     +       V+ +Y+ + +  L Y LI   P   
Sbjct: 196 TFMYANKSIVNQVFLRERSSKIQCAWLLVFLAGSSVL-LYYTFHSQSLYYSLIFLNPTLD 255

Query: 288 P-PFWHAIFIIMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRA 347
              FW   +I+ + D +++   M +KC++L+    S    ++ +G    L+E L   YR 
Sbjct: 256 HLSFWEVFWIVGITDFILKFFFMGLKCLILLV--PSFIMPFKSKGYWYMLLEELCQYYRT 315

Query: 348 LLPTPVWYRFFLN-KEYGSL----FSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEV 407
            +P PVW+R+ ++  E+G++       LL  LYL  KL      +++F   L+ +   + 
Sbjct: 316 FVPIPVWFRYLISYGEFGNVTRWSLGILLALLYLILKLLEFFGHLRTFRQVLR-IFFTQP 375

Query: 408 HYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK 467
            YG  A+  Q S   D+C+ICQ +   PILL C+HIFCE+C++ WF RE+TCPLCR ++ 
Sbjct: 376 SYGVAASKRQCSDVDDICSICQAEFQKPILLICQHIFCEECMTLWFNREKTCPLCRTVIS 435

Query: 468 PADLRSFGDGSTSLFFQVF 472
              +  + DG+TS   Q++
Sbjct: 436 D-HINKWKDGATSSHLQIY 435

[Close]

BLAST of CSPI04G16830 vs. ExPASy TrEMBL
Match: A0A0A0L088 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337310 PE=4 SV=1)

HSP 1 Score: 914.4 bits (2362), Expect = 1.9e-262
Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 0


Query: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60
           MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS
Sbjct: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60

Query: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120
           ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV
Sbjct: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120

Query: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180
           SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY
Sbjct: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]

BLAST of CSPI04G16830 vs. ExPASy TrEMBL
Match: A0A1S3CIV8 (RING finger and transmembrane domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103501489 PE=4 SV=1)

HSP 1 Score: 909.4 bits (2349), Expect = 6.0e-261
Identity = 468/471 (99.36%), Postives = 468/471 (99.36%), Query Frame = 0


Query: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60
           MEGSGSDPDSHR ASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS
Sbjct: 1   MEGSGSDPDSHRPASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60

Query: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120
           ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV
Sbjct: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120

Query: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180
           SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGD SE AGGNSRDSSYQRY
Sbjct: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDTSEVAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]

BLAST of CSPI04G16830 vs. ExPASy TrEMBL
Match: A0A6J1DPQ0 (RING finger and transmembrane domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111023167 PE=4 SV=1)

HSP 1 Score: 855.9 bits (2210), Expect = 7.9e-245
Identity = 445/471 (94.48%), Postives = 452/471 (95.97%), Query Frame = 0


Query: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60
           ME SGSDPD+HRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGR SHQESEALIS
Sbjct: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60

Query: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120
           ARLPSGFRDH+RS IEESSG+TNDGEVSIRIIGAGE EHGRDGAGLVVGQAR+V GQNAV
Sbjct: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120

Query: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180
           S QSVSGLA     SELSQG+ A ERGAREGIP+ IN GADGDA EAAGGN RDSSYQRY
Sbjct: 121 SSQSVSGLA-----SELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 466

[Close]

BLAST of CSPI04G16830 vs. ExPASy TrEMBL
Match: A0A6J1IS82 (E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC111478227 PE=4 SV=1)

HSP 1 Score: 846.3 bits (2185), Expect = 6.3e-242
Identity = 440/471 (93.42%), Postives = 448/471 (95.12%), Query Frame = 0


Query: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60
           MEGS  DPDSHRAASTSGSSRRFG+LAASNIIQAPLSALLEYSGLLRGR SHQE EALIS
Sbjct: 1   MEGSSIDPDSHRAASTSGSSRRFGLLAASNIIQAPLSALLEYSGLLRGRPSHQEPEALIS 60

Query: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120
           ARLPS FR HLRS I+ESS A+NDGEVSIRIIGAGEPEHGRDGAGLVVGQAR+ SGQNA 
Sbjct: 61  ARLPSAFRGHLRSQIDESSSASNDGEVSIRIIGAGEPEHGRDGAGLVVGQAREFSGQNAA 120

Query: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180
           S Q      SVTL SELSQG+SA ER AREGIP+SINAGADGDASEAAGGNSRDSSYQRY
Sbjct: 121 SSQ------SVTLASELSQGDSATERSAREGIPQSINAGADGDASEAAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLV ISLAFTIHVIGVYWWYQND LLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVGISLAFTIHVIGVYWWYQNDGLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKC+LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQV+AAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVNAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 465

[Close]

BLAST of CSPI04G16830 vs. ExPASy TrEMBL
Match: A0A6J1GEZ3 (RING finger and transmembrane domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111453584 PE=4 SV=1)

HSP 1 Score: 842.0 bits (2174), Expect = 1.2e-240
Identity = 437/471 (92.78%), Postives = 448/471 (95.12%), Query Frame = 0


Query: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60
           MEGSG DPDSHRAASTSGSSRRFG+L+ASNIIQAPLSALLEYSGLLRGR SHQE EALIS
Sbjct: 1   MEGSGIDPDSHRAASTSGSSRRFGLLSASNIIQAPLSALLEYSGLLRGRPSHQEPEALIS 60

Query: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120
           ARLPS FR HLRS I+ESSGA+NDGEV IRIIG GEPEHGRDGAGLVVGQAR+V+G+NAV
Sbjct: 61  ARLPSAFRGHLRSQIDESSGASNDGEVLIRIIGDGEPEHGRDGAGLVVGQAREVNGRNAV 120

Query: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180
           S Q      SVTL SELSQG+SA ERGAREGIP+S NAGADGDASEAAGGNSRDSSYQRY
Sbjct: 121 SSQ------SVTLASELSQGDSATERGAREGIPQSRNAGADGDASEAAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLV ISL FTIHVIGVYWWYQND LLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVGISLVFTIHVIGVYWWYQNDGLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKC+LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLP PVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPAPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQV+AAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVNAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 465

[Close]

BLAST of CSPI04G16830 vs. NCBI nr
Match: XP_004142726.1 (RING finger and transmembrane domain-containing protein 2 isoform X2 [Cucumis sativus] >KGN54474.1 hypothetical protein Csa_012295 [Cucumis sativus])

HSP 1 Score: 914.4 bits (2362), Expect = 3.9e-262
Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 0


Query: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60
           MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS
Sbjct: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60

Query: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120
           ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV
Sbjct: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120

Query: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180
           SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY
Sbjct: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]

BLAST of CSPI04G16830 vs. NCBI nr
Match: XP_031740196.1 (RING finger and transmembrane domain-containing protein 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 914.4 bits (2362), Expect = 3.9e-262
Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 0


Query: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60
           MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS
Sbjct: 11  MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 70

Query: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120
           ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV
Sbjct: 71  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 130

Query: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180
           SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY
Sbjct: 131 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 190

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 191 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 250

Query: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 251 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 310

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 311 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 370

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 371 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 430

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 431 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 481

[Close]

BLAST of CSPI04G16830 vs. NCBI nr
Match: XP_008463298.1 (PREDICTED: RING finger and transmembrane domain-containing protein 2 [Cucumis melo])

HSP 1 Score: 909.4 bits (2349), Expect = 1.2e-260
Identity = 468/471 (99.36%), Postives = 468/471 (99.36%), Query Frame = 0


Query: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60
           MEGSGSDPDSHR ASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS
Sbjct: 1   MEGSGSDPDSHRPASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60

Query: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120
           ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV
Sbjct: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120

Query: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180
           SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGD SE AGGNSRDSSYQRY
Sbjct: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDTSEVAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]

BLAST of CSPI04G16830 vs. NCBI nr
Match: XP_038881776.1 (RING finger and transmembrane domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 879.8 bits (2272), Expect = 1.1e-251
Identity = 459/471 (97.45%), Postives = 461/471 (97.88%), Query Frame = 0


Query: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60
           MEGSGSDPDSHRAASTS SSRRFGMLAASNIIQAPLSALLEYSGLLRGR SHQESEALIS
Sbjct: 1   MEGSGSDPDSHRAASTS-SSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60

Query: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120
           ARLPSGFRDHLRS IEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQAR+ SGQN V
Sbjct: 61  ARLPSGFRDHLRSQIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQAREGSGQNTV 120

Query: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180
           SLQSVSGLASVTL SELSQGESA ERGAREGIP+SINA ADGDASEAAGGNSRDSSYQRY
Sbjct: 121 SLQSVSGLASVTLASELSQGESATERGAREGIPQSINASADGDASEAAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 470

[Close]

BLAST of CSPI04G16830 vs. NCBI nr
Match: XP_022156230.1 (RING finger and transmembrane domain-containing protein 2 [Momordica charantia])

HSP 1 Score: 855.9 bits (2210), Expect = 1.6e-244
Identity = 445/471 (94.48%), Postives = 452/471 (95.97%), Query Frame = 0


Query: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60
           ME SGSDPD+HRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGR SHQESEALIS
Sbjct: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60

Query: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120
           ARLPSGFRDH+RS IEESSG+TNDGEVSIRIIGAGE EHGRDGAGLVVGQAR+V GQNAV
Sbjct: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120

Query: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180
           S QSVSGLA     SELSQG+ A ERGAREGIP+ IN GADGDA EAAGGN RDSSYQRY
Sbjct: 121 SSQSVSGLA-----SELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 466

[Close]

BLAST of CSPI04G16830 vs. TAIR 10
Match: AT5G01960.1 (RING/U-box superfamily protein )

HSP 1 Score: 585.9 bits (1509), Expect = 2.9e-167
Identity = 326/472 (69.07%), Postives = 365/472 (77.33%), Query Frame = 0


Query: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQS-HQESEALI 60
           ME  G+  DS R     GS RR  +L+ASNIIQAP+S LLEYSGL R R S   E+E L+
Sbjct: 1   METPGASHDSFR-----GSPRRNSILSASNIIQAPISTLLEYSGLFRARPSPSHEAETLV 60

Query: 61  SARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNA 120
           S               ++SSG +N GEV+IRIIG  E +   D               NA
Sbjct: 61  S---------------DDSSGLSN-GEVAIRIIGNTEQDAETD--------------TNA 120

Query: 121 VSLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQR 180
           +     S L    LGS  +Q +     GA EG  ++  A  D  A +AA   SRDS YQR
Sbjct: 121 LREPGHSEL----LGSSATQVDPMG--GASEGASQA--APGDPAAGDAA---SRDSPYQR 180

Query: 181 YDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERK 240
           YDIQQAAR IEQILPFS LLLVVFIRQHLQGFFV IWIAA M+KSNDIL+KQTALKGER 
Sbjct: 181 YDIQQAARWIEQILPFSLLLLVVFIRQHLQGFFVAIWIAAVMFKSNDILKKQTALKGERH 240

Query: 241 ISVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAV 300
           IS L+ IS+AFT HV+GVYWW++ DDLLYPLIM PP++IPPFWHAIFII+VNDTLVRQA 
Sbjct: 241 ISALIGISVAFTAHVVGVYWWFRKDDLLYPLIMLPPKSIPPFWHAIFIIVVNDTLVRQAS 300

Query: 301 MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 360
           M+ KC LLMYYKNSRGRNYRKQGQ+LTLVEY +LLYR+LLPTPVWYRFFLNK+YGSLFSS
Sbjct: 301 MIFKCFLLMYYKNSRGRNYRKQGQLLTLVEYFMLLYRSLLPTPVWYRFFLNKDYGSLFSS 360

Query: 361 LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 420
           L+TGLYLTFKLTSVVEKVQSFF ALKALSRKEVHYG+YAT+EQV+AAGDLCAICQEKMH 
Sbjct: 361 LMTGLYLTFKLTSVVEKVQSFFTALKALSRKEVHYGSYATTEQVNAAGDLCAICQEKMHT 420

Query: 421 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 472
           PILLRCKH+FCEDCVSEWFERERTCPLCRALVKPADL+SFGDGSTSLFFQ+F
Sbjct: 421 PILLRCKHMFCEDCVSEWFERERTCPLCRALVKPADLKSFGDGSTSLFFQIF 426

[Close]

BLAST of CSPI04G16830 vs. TAIR 10
Match: AT1G65040.2 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 6.6e-10
Identity = 46/128 (35.94%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 330 YLLLLYRALLPTPVWYRFFLN--KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKAL 389
           + L L R LL   ++  FFL     YG L   L+  LY TF+   +  +V  +    K  
Sbjct: 214 FYLELVRDLLHLSMYLCFFLMIFMNYG-LPLHLIRELYETFRNFKI--RVTDYLRYRKIT 273

Query: 390 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 449
           S     +   AT E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP C
Sbjct: 274 SNMNDRF-PDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTC 333

Query: 450 RALVKPAD 456
           RALV PA+
Sbjct: 334 RALVVPAE 337

[Close]

BLAST of CSPI04G16830 vs. TAIR 10
Match: AT1G65040.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 6.6e-10
Identity = 46/128 (35.94%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 330 YLLLLYRALLPTPVWYRFFLN--KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKAL 389
           + L L R LL   ++  FFL     YG L   L+  LY TF+   +  +V  +    K  
Sbjct: 35  FYLELVRDLLHLSMYLCFFLMIFMNYG-LPLHLIRELYETFRNFKI--RVTDYLRYRKIT 94

Query: 390 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 449
           S     +   AT E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP C
Sbjct: 95  SNMNDRF-PDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTC 154

Query: 450 RALVKPAD 456
           RALV PA+
Sbjct: 155 RALVVPAE 158

[Close]

BLAST of CSPI04G16830 vs. TAIR 10
Match: AT1G65040.3 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 6.6e-10
Identity = 46/128 (35.94%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 330 YLLLLYRALLPTPVWYRFFLN--KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKAL 389
           + L L R LL   ++  FFL     YG L   L+  LY TF+   +  +V  +    K  
Sbjct: 143 FYLELVRDLLHLSMYLCFFLMIFMNYG-LPLHLIRELYETFRNFKI--RVTDYLRYRKIT 202

Query: 390 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 449
           S     +   AT E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP C
Sbjct: 203 SNMNDRF-PDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTC 262

Query: 450 RALVKPAD 456
           RALV PA+
Sbjct: 263 RALVVPAE 266

[Close]

BLAST of CSPI04G16830 vs. TAIR 10
Match: AT3G16090.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 4.3e-09
Identity = 44/128 (34.38%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 330 YLLLLYRALLPTPVWYRFF--LNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKAL 389
           + L L R LL   ++  FF  +   YG +   LL  LY TF+   +  +V  +    K  
Sbjct: 214 FYLELIRDLLHLSMYICFFFVIFMNYG-VPLHLLRELYETFRNFQI--RVSDYLRYRKIT 273

Query: 390 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 449
           S     +   AT E+++A+   C IC+E+M     L C H+F   C+  W ER++TCP C
Sbjct: 274 SNMNDRF-PDATPEELTASDATCIICREEMTNAKKLICGHLFHVHCLRSWLERQQTCPTC 333

Query: 450 RALVKPAD 456
           RALV P +
Sbjct: 334 RALVVPPE 337

The following BLAST results are available for this feature:

BLAST of CSPI04G16830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96EX2	3.4e-35	31.47	RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=960...	[more]
Q5RAG4	8.4e-34	31.12	RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=960...	[more]
Q3UF64	6.0e-32	28.33	RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=100...	[more]
Q6NTV1	2.3e-31	29.60	E3 ubiquitin-protein ligase RNFT1 OS=Xenopus laevis OX=8355 GN=rnft1 PE=2 SV=2	[more]
Q5M7Z0	6.7e-31	27.33	E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2	[more]

BLAST of CSPI04G16830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L088	1.9e-262	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337310 P...	[more]
A0A1S3CIV8	6.0e-261	99.36	RING finger and transmembrane domain-containing protein 2 OS=Cucumis melo OX=365...	[more]
A0A6J1DPQ0	7.9e-245	94.48	RING finger and transmembrane domain-containing protein 2 OS=Momordica charantia...	[more]
A0A6J1IS82	6.3e-242	93.42	E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC1114782...	[more]
A0A6J1GEZ3	1.2e-240	92.78	RING finger and transmembrane domain-containing protein 2-like OS=Cucurbita mosc...	[more]

BLAST of CSPI04G16830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142726.1	3.9e-262	100.00	RING finger and transmembrane domain-containing protein 2 isoform X2 [Cucumis sa...	[more]
XP_031740196.1	3.9e-262	100.00	RING finger and transmembrane domain-containing protein 2 isoform X1 [Cucumis sa...	[more]
XP_008463298.1	1.2e-260	99.36	PREDICTED: RING finger and transmembrane domain-containing protein 2 [Cucumis me...	[more]
XP_038881776.1	1.1e-251	97.45	RING finger and transmembrane domain-containing protein 2 [Benincasa hispida]	[more]
XP_022156230.1	1.6e-244	94.48	RING finger and transmembrane domain-containing protein 2 [Momordica charantia]	[more]

BLAST of CSPI04G16830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01960.1	2.9e-167	69.07	RING/U-box superfamily protein	[more]
AT1G65040.2	6.6e-10	35.94	RING/U-box superfamily protein	[more]
AT1G65040.1	6.6e-10	35.94	RING/U-box superfamily protein	[more]
AT1G65040.3	6.6e-10	35.94	RING/U-box superfamily protein	[more]
AT3G16090.1	4.3e-09	34.38	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 410..447 e-value: 1.7E-7 score: 40.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 410..448 score: 13.595753
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 408..451 e-value: 2.9E-10 score: 39.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..175
None	No IPR available	PANTHER	PTHR15860:SF19	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..471
None	No IPR available	CDD	cd16532	RING-HC_RNFT1_like	coord: 409..448 e-value: 1.06119E-27 score: 102.362
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 405..453
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 385..458 e-value: 4.4E-18 score: 66.4
IPR044235	RING finger and transmembrane domain-containing protein 1/2	PANTHER	PTHR15860	UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN	coord: 1..471
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 425..434

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G16830.1	CSPI04G16830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1904294	positive regulation of ERAD pathway
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity