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CSPI04G16120 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGGAATCAGACGCTCGTCCATTCCTCTGCTTATACATACAGCACAAGAAACTCCTATTAATTCCAATTCCAATTCCAAACCCTAAATTGAAAGACTAGATCTCACAACAATGGAAGAAGATGGCGTTGCGGATGAGCATTCTCACAACTTCATCCAACAACGAGGACAAGAGCAAGAACACCAAAAGTCAAGTGGGTTTTTGAAGAATTTCATTTCCAACATGGCGTCCTCAGAGGGAACTGACGAGAAGAAAACGGATCATGAATATCAAGAAAATGGAGAAAAGTCAAGCGGGTTTCTGAAGAATTTCATGTCGAACATGGTCTCTGCAGAGGAAAATGAAGGGAAAACAGACCAAGAAAAGGAGGAAGAAGAAGAAGGAAAGACAAATGGGTTTCTGAAGAATTTCATCTCAAATATTGTTTCTGGAGAGGAAACTGAAGAAAAAGCGGAGGAGGAAGAAGAAGAAGGAAAGGAAAATGGGTTTCTGAAGACTTTCATGTCGAACAAAGTAAATGAAGGGGAGAGAGAAGAGAAAACAGAGGTAGAAGAAGAAAAGGGAGGGGGTTTTTTGAGGAATTTCATTTCAAACATGGTGTCTTCAGAAGGAAATGAAGATGATGATGGTAAGATGACAAGCAATGACATGGTTTCTCAAAAAACAGGTGAAGAAGAAAGAGACAAAAGCAGCGGTTATAAGTCGGTTGAAGAAAAGGGCGGCGACAACGGCAGTGGCGGTGGAGGTGGAGGTGGAGGCATTATAGACAACATTGTCTCACATTTACCTGCTTCACTTCAAGGTGAGTATTATCATAAAACAAGAAAATTTTGAATTAATTTAATTTGAGAGATAAAACAGGGTAATGAGATTGAAATTGTTGAAACAGGTGATGCAGTGACAACATCAGATGAAGCAGCAATTCTGATCCACTCAATTATCCACGAATGAAAGTTTCTTGGGTTTTGATTTTGTTTTGTGTTCATAGGTTTTGTTTTGTTTTTTTTTCTATGTAAATTTAAGTTTGATGTGTTTTTGATTGATTGGGACGTGTACTCTTTATTTTTTGTAAAACAGAGTACATAAGAAACAATGGGTTGTAGGGGTAAGAGAAAGAAGATGCAGAAAATCAGGAAATTTGACTATGAAAATGTAGTTTAATCTTTATTTATTAACAATGGATTTGGTGTTTTGTTGGATGGAACGCTTCTATAGAAAGAAAGGGA TAGGAATCAGACGCTCGTCCATTCCTCTGCTTATACATACAGCACAAGAAACTCCTATTAATTCCAATTCCAATTCCAAACCCTAAATTGAAAGACTAGATCTCACAACAATGGAAGAAGATGGCGTTGCGGATGAGCATTCTCACAACTTCATCCAACAACGAGGACAAGAGCAAGAACACCAAAAGTCAAGTGGGTTTTTGAAGAATTTCATTTCCAACATGGCGTCCTCAGAGGGAACTGACGAGAAGAAAACGGATCATGAATATCAAGAAAATGGAGAAAAGTCAAGCGGGTTTCTGAAGAATTTCATGTCGAACATGGTCTCTGCAGAGGAAAATGAAGGGAAAACAGACCAAGAAAAGGAGGAAGAAGAAGAAGGAAAGACAAATGGGTTTCTGAAGAATTTCATCTCAAATATTGTTTCTGGAGAGGAAACTGAAGAAAAAGCGGAGGAGGAAGAAGAAGAAGGAAAGGAAAATGGGTTTCTGAAGACTTTCATGTCGAACAAAGTAAATGAAGGGGAGAGAGAAGAGAAAACAGAGGTAGAAGAAGAAAAGGGAGGGGGTTTTTTGAGGAATTTCATTTCAAACATGGTGTCTTCAGAAGGAAATGAAGATGATGATGGTAAGATGACAAGCAATGACATGGTTTCTCAAAAAACAGGTGAAGAAGAAAGAGACAAAAGCAGCGGTTATAAGTCGGTTGAAGAAAAGGGCGGCGACAACGGCAGTGGCGGTGGAGGTGGAGGTGGAGGCATTATAGACAACATTGTCTCACATTTACCTGCTTCACTTCAAGGTGATGCAGTGACAACATCAGATGAAGCAGCAATTCTGATCCACTCAATTATCCACGAATGAAAGTTTCTTGGGTTTTGATTTTGTTTTGTGTTCATAGGTTTTGTTTTGTTTTTTTTTCTATGTAAATTTAAGTTTGATGTGTTTTTGATTGATTGGGACGTGTACTCTTTATTTTTTGTAAAACAGAGTACATAAGAAACAATGGGTTGTAGGGGTAAGAGAAAGAAGATGCAGAAAATCAGGAAATTTGACTATGAAAATGTAGTTTAATCTTTATTTATTAACAATGGATTTGGTGTTTTGTTGGATGGAACGCTTCTATAGAAAGAAAGGGA ATGGAAGAAGATGGCGTTGCGGATGAGCATTCTCACAACTTCATCCAACAACGAGGACAAGAGCAAGAACACCAAAAGTCAAGTGGGTTTTTGAAGAATTTCATTTCCAACATGGCGTCCTCAGAGGGAACTGACGAGAAGAAAACGGATCATGAATATCAAGAAAATGGAGAAAAGTCAAGCGGGTTTCTGAAGAATTTCATGTCGAACATGGTCTCTGCAGAGGAAAATGAAGGGAAAACAGACCAAGAAAAGGAGGAAGAAGAAGAAGGAAAGACAAATGGGTTTCTGAAGAATTTCATCTCAAATATTGTTTCTGGAGAGGAAACTGAAGAAAAAGCGGAGGAGGAAGAAGAAGAAGGAAAGGAAAATGGGTTTCTGAAGACTTTCATGTCGAACAAAGTAAATGAAGGGGAGAGAGAAGAGAAAACAGAGGTAGAAGAAGAAAAGGGAGGGGGTTTTTTGAGGAATTTCATTTCAAACATGGTGTCTTCAGAAGGAAATGAAGATGATGATGGTAAGATGACAAGCAATGACATGGTTTCTCAAAAAACAGGTGAAGAAGAAAGAGACAAAAGCAGCGGTTATAAGTCGGTTGAAGAAAAGGGCGGCGACAACGGCAGTGGCGGTGGAGGTGGAGGTGGAGGCATTATAGACAACATTGTCTCACATTTACCTGCTTCACTTCAAGGTGATGCAGTGACAACATCAGATGAAGCAGCAATTCTGATCCACTCAATTATCCACGAATGA MEEDGVADEHSHNFIQQRGQEQEHQKSSGFLKNFISNMASSEGTDEKKTDHEYQENGEKSSGFLKNFMSNMVSAEENEGKTDQEKEEEEEGKTNGFLKNFISNIVSGEETEEKAEEEEEEGKENGFLKTFMSNKVNEGEREEKTEVEEEKGGGFLRNFISNMVSSEGNEDDDGKMTSNDMVSQKTGEEERDKSSGYKSVEEKGGDNGSGGGGGGGGIIDNIVSHLPASLQGDAVTTSDEAAILIHSIIHE* Homology
BLAST of CSPI04G16120 vs. ExPASy TrEMBL
Match: A0A0A0L1D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312840 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 1.4e-126 Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of CSPI04G16120 vs. ExPASy TrEMBL
Match: A0A5D3CID7 (Cyclin-dependent kinase 11B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00140 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 9.5e-104 Identity = 216/248 (87.10%), Postives = 228/248 (91.94%), Query Frame = 0
BLAST of CSPI04G16120 vs. ExPASy TrEMBL
Match: A0A5A7T838 (Cyclin-dependent kinase 11B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00200 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 2.9e-84 Identity = 185/248 (74.60%), Postives = 197/248 (79.44%), Query Frame = 0
BLAST of CSPI04G16120 vs. ExPASy TrEMBL
Match: A0A1S3CMH8 (cyclin-dependent kinase 11B-like OS=Cucumis melo OX=3656 GN=LOC103502155 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 2.9e-84 Identity = 185/248 (74.60%), Postives = 197/248 (79.44%), Query Frame = 0
BLAST of CSPI04G16120 vs. ExPASy TrEMBL
Match: A0A6J1GER9 (cilia- and flagella-associated protein 251 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453519 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.3e-39 Identity = 124/248 (50.00%), Postives = 144/248 (58.06%), Query Frame = 0
BLAST of CSPI04G16120 vs. NCBI nr
Match: XP_004148627.1 (cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN54402.1 hypothetical protein Csa_018150 [Cucumis sativus]) HSP 1 Score: 462.2 bits (1188), Expect = 2.8e-126 Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of CSPI04G16120 vs. NCBI nr
Match: TYK10934.1 (cyclin-dependent kinase 11B-like [Cucumis melo var. makuwa]) HSP 1 Score: 386.3 bits (991), Expect = 2.0e-103 Identity = 216/248 (87.10%), Postives = 228/248 (91.94%), Query Frame = 0
BLAST of CSPI04G16120 vs. NCBI nr
Match: XP_008464224.1 (PREDICTED: cyclin-dependent kinase 11B-like [Cucumis melo] >KAA0037727.1 cyclin-dependent kinase 11B-like [Cucumis melo var. makuwa]) HSP 1 Score: 321.6 bits (823), Expect = 5.9e-84 Identity = 185/248 (74.60%), Postives = 197/248 (79.44%), Query Frame = 0
BLAST of CSPI04G16120 vs. NCBI nr
Match: XP_038883081.1 (ABC transporter F family member 4 [Benincasa hispida]) HSP 1 Score: 284.6 bits (727), Expect = 8.0e-73 Identity = 180/306 (58.82%), Postives = 208/306 (67.97%), Query Frame = 0
BLAST of CSPI04G16120 vs. NCBI nr
Match: KAG6603566.1 (hypothetical protein SDJN03_04175, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 176.0 bits (445), Expect = 4.0e-40 Identity = 125/248 (50.40%), Postives = 145/248 (58.47%), Query Frame = 0
BLAST of CSPI04G16120 vs. TAIR 10
Match: AT3G51750.1 (unknown protein; Has 15 Blast hits to 14 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 1.7e-04 Identity = 42/123 (34.15%), Postives = 59/123 (47.97%), Query Frame = 0
BLAST of CSPI04G16120 vs. TAIR 10
Match: AT3G51750.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 1.7e-04 Identity = 42/123 (34.15%), Postives = 59/123 (47.97%), Query Frame = 0
BLAST of CSPI04G16120 vs. TAIR 10
Match: AT3G51750.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages. ) HSP 1 Score: 44.3 bits (103), Expect = 1.7e-04 Identity = 42/123 (34.15%), Postives = 59/123 (47.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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