CSPI04G15780 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G15780
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Clathrin light chain
Location	Chr4: 13112296 .. 13115622 (-)
RNA-Seq Expression	CSPI04G15780
Synteny	CSPI04G15780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCGTCAAACTCTTTTTTCCATTTCTTATAATAACGACCGCAAACGGTCGCCAAGCTGCAGAGAACACATTCGCGCGGAAAGATTAATCGGCTGTTGACCGTCGCCGGAGGAACAAGCAGACTACTCCGACGCCATGTCAACCTTCGCCGGAACGCCTCCTTCTCCCTTCGACGATGCCACCATCGGATTCGAACCTCGCCTCGCTTCTCAAAGATTTGAAACCTTTTCAACTTTCGAAGCCGAGTCCGCCGACGACTCCTCACCGATCTTCGGAAATCTGCCGTACGACCAGGGAGACGGCGTTGAGCCGACTCCGCCTACTAATTTCTCGGCGGGTGGAGGATTCTCGAGTTTCTCGTCGCAGCAGAACGGGAAGGGTTTTGATGGCGGTTTTGGCGAATCGGACGGCCCGATCCTCTCGTCGCCGACGGCGATGGAACCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGGAGGTGAGAAAACTGTTGAACTACTTGGGGATTGTAAGATTGTTGGTATAAGATTTTTTGGAATCAAAATCTGGTAGTTGTTAGCTCTTACTGAGATGATCAAATCCTTGTGTTTATGAACTGAATTAAATTTTTGCGATCATCCGATGGATGAAACTATGCGTAATTTTTGTGCATTCAAGAAATTCTAACCCTCTTTTACTTGCTGCTTTTGTGTCAAAAGCTTACCTCTCAGGTTGATAATCATTTTGGGTCGTTTCATTTGGTTTTTTGGTTTTGAAAATTGCTTGGTCTAATTGAAAGAGTTGAATCCAAATAGTCAAATTCTAAAAATAAAAACAGATTTTAAGAAACTATTTTTCTTCAAGAACTTGACTGTATTTTAAATAGTGAGCACTAAAAAAGTGTTCACTATTTAAAAACTTAGCTTAATTTTCAAAATCTAAGAATGAAATTATTACCAAATCGATCTTAGACTTTTAGTTTTTGGATTCTGAAAATTATACTTACTTTCTTAGAATTTTTTTTACCGTGGTTTTCATTTTTCTGAACTAAATACTAGAATTATTAGTAAAATTTCAAAAACTAAAAACAACTTTTCCAATTTTCAAAATTGTGGTTTGGTTTTGAAACACTCCTAAGAGGTGGTAGCAATTCTATGTTTAACTTTTATAAACCAAAAACTAGATGACTATCAAACAAATTTTAAGACTTGTTTGAATCAACTTTCTAAGTGCTTGAAAACTCCTTTTTTTATACTTAAAAATTGAAGCACTTGAAAAGTCAACCTAAACTATCCATATGTTTAGTATTACCGTGGTTCTCTTCTAATAAGTTACCACTTAATCTAAAAGCTTGAGTTGATGGGTTATGATAAATTTAATTATATAATGGTTTAACGTGAATCGTAGCTGTGAATGGCAGATTGAATGCAATTCGATTGGAAGAAAAGGAGAAGAGAGAGATGGAGCTGTTGGAAGAGATAATTGATGAGGCTGATCAGTATAAAATTGAATTCTACAGAAGGCGAAAGCTTGCTCTTGATCATAGCAAAGCTACTAATAGGGATAAGGAGAAGGTGAGAATGTCTAAACTCATTCAATTTCTTTCATTATAAACTGAAAACTTCACTTTATCTTCTTTAAACATAGAATGAAGAATCATGAACTAAAGTGATTTTGTGGAATGTTGAGTGATTTGGCTTCTGAATCTACAATTAACGGTTGTTGAATTGAATGTTGAAATTAAGTATGCTGCTTCTTTAGATTCTAACCTTTCTTGTGGTTGAGATTTCGATTTTAGGCTAACTGCAAAAAAGTACTGTCGAGCTATGTCTTTTGTTTTTAAAAATAACTTTACTCTTTTAAAAATTGTCATATCATCTTTAATCAAGATGCCATATTATCTTTAACCTTTCATAAATGTTTCAAAACTATCTTTCGAGTAGAAATCTTTTAGATTTTTTTTCTGTTGAGGTTGAAAACTGAAATAAGTGCGTTGGTGATTTGGAACGACATGGGGTATTTGTGTCATAAGATCTTCGTTCCAAGTTCCAATTTTCAATGAATAGTCTAAAGATTTCTACTCCAAATGAAAGGACAAGGATAACGTTTAAACTTTCAAAAGAATGTGGACATTTTGTAAACGAAAGACAGAGTTTTTCAATATTTCTTTCATAATCTAGCCTAGGTTTTAAACTCTACGATATGTTCTCAACACTCCCTCATGCGTACACAATTGGATGTTGATTTGATTGATGAGACCCATCATCATTTGACTCTCAATATCAAATGGGATAAATAATTAGATATTTGAACTCAAGATTCGCTTTTCTGATATCGTAGTTAAATCACTCCTAGGTCCAAAGAGTCTTAAGTAAATCAGGATATTAACATTATTGTTGTGAGGTTTTACCACATCAAATGTATTTATGTGGCCATTTGAGCCTAATATTTGTTAGAATCCTTCTTATTGGAAAACAAGTAGGCTCATTAAATTAAGCAAAAGGTAAAACCATTGGATTCTAACCTTTTCTTAGTCCTAATTATTTTTCTCTCTTACCATAATTTGATCTTAAAATGACAGCAATATCTAGCAAACCAAGAGAAGTTCCATGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTAATCCCCAATGAGGTACCAACCATTGAACAAAGGGGAAAGAAAGACAAGGAAAAGAAGCCTGCTATTGTTGTTATTCAAGGTCCGAAGCCCGGGAAGCCAACCGATCTCTCGAGAATGCGTCAAATACATCTGAAACTCAAACACAATACCCCTCTTCACATGAAGCCTAAACCCCCACCAGCAGAACCTAAAGCCGAATCGAAAAAGGATTCTTCTGCAGCTGGGGCAACTCTGGCTGCAGGTTCGGGTTCGGCAGCTTCAAGAACTGCTGCTGTTGCTACTTCTGAGGGTAGAACTGTTGGCTGAAATTGGCTGGTATATATATTTTATACTCACTGTTTTGGATGTTTAGGTAAAAAAGAAACTAGCTATTGTGTCATGGATTTTGATGTTTAATGATAGTAAGTTATAGTAAATAGTAAATAAATCACTTGAGAAATCTAGCAGTATATGTAGGTAAAGCCATAAAAAAGCTACAAAAGTCCTAATGAGGGCTTTGGTTCTGGTGGATATTTTATGGTTTTGACTGCTTAAGTTTCTGTTGTTTTGTGAATATTTATGATGATTTTGTGATATAGATTATACAACCCAATGGAGTAAGTGTTTAGTGCATTTGTAAATATTGTAGAAGTTGGAAGTTGGAAGATTTATGAGATAGAGACAAGTCATTTTGATGTGTCTTTGTTTTGGGTTTAAT

mRNA sequence

CGCCGTCAAACTCTTTTTTCCATTTCTTATAATAACGACCGCAAACGGTCGCCAAGCTGCAGAGAACACATTCGCGCGGAAAGATTAATCGGCTGTTGACCGTCGCCGGAGGAACAAGCAGACTACTCCGACGCCATGTCAACCTTCGCCGGAACGCCTCCTTCTCCCTTCGACGATGCCACCATCGGATTCGAACCTCGCCTCGCTTCTCAAAGATTTGAAACCTTTTCAACTTTCGAAGCCGAGTCCGCCGACGACTCCTCACCGATCTTCGGAAATCTGCCGTACGACCAGGGAGACGGCGTTGAGCCGACTCCGCCTACTAATTTCTCGGCGGGTGGAGGATTCTCGAGTTTCTCGTCGCAGCAGAACGGGAAGGGTTTTGATGGCGGTTTTGGCGAATCGGACGGCCCGATCCTCTCGTCGCCGACGGCGATGGAACCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGGAGATTGAATGCAATTCGATTGGAAGAAAAGGAGAAGAGAGAGATGGAGCTGTTGGAAGAGATAATTGATGAGGCTGATCAGTATAAAATTGAATTCTACAGAAGGCGAAAGCTTGCTCTTGATCATAGCAAAGCTACTAATAGGGATAAGGAGAAGCAATATCTAGCAAACCAAGAGAAGTTCCATGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTAATCCCCAATGAGGTACCAACCATTGAACAAAGGGGAAAGAAAGACAAGGAAAAGAAGCCTGCTATTGTTGTTATTCAAGGTCCGAAGCCCGGGAAGCCAACCGATCTCTCGAGAATGCGTCAAATACATCTGAAACTCAAACACAATACCCCTCTTCACATGAAGCCTAAACCCCCACCAGCAGAACCTAAAGCCGAATCGAAAAAGGATTCTTCTGCAGCTGGGGCAACTCTGGCTGCAGGTTCGGGTTCGGCAGCTTCAAGAACTGCTGCTGTTGCTACTTCTGAGGGTAGAACTGTTGGCTGAAATTGGCTGGTATATATATTTTATACTCACTGTTTTGGATGTTTAGGTAAAAAAGAAACTAGCTATTGTGTCATGGATTTTGATGTTTAATGATAGTAAGTTATAGTAAATAGTAAATAAATCACTTGAGAAATCTAGCAGTATATGTAGGTAAAGCCATAAAAAAGCTACAAAAGTCCTAATGAGGGCTTTGGTTCTGGTGGATATTTTATGGTTTTGACTGCTTAAGTTTCTGTTGTTTTGTGAATATTTATGATGATTTTGTGATATAGATTATACAACCCAATGGAGTAAGTGTTTAGTGCATTTGTAAATATTGTAGAAGTTGGAAGTTGGAAGATTTATGAGATAGAGACAAGTCATTTTGATGTGTCTTTGTTTTGGGTTTAAT

Coding sequence (CDS)

ATGTCAACCTTCGCCGGAACGCCTCCTTCTCCCTTCGACGATGCCACCATCGGATTCGAACCTCGCCTCGCTTCTCAAAGATTTGAAACCTTTTCAACTTTCGAAGCCGAGTCCGCCGACGACTCCTCACCGATCTTCGGAAATCTGCCGTACGACCAGGGAGACGGCGTTGAGCCGACTCCGCCTACTAATTTCTCGGCGGGTGGAGGATTCTCGAGTTTCTCGTCGCAGCAGAACGGGAAGGGTTTTGATGGCGGTTTTGGCGAATCGGACGGCCCGATCCTCTCGTCGCCGACGGCGATGGAACCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGGAGATTGAATGCAATTCGATTGGAAGAAAAGGAGAAGAGAGAGATGGAGCTGTTGGAAGAGATAATTGATGAGGCTGATCAGTATAAAATTGAATTCTACAGAAGGCGAAAGCTTGCTCTTGATCATAGCAAAGCTACTAATAGGGATAAGGAGAAGCAATATCTAGCAAACCAAGAGAAGTTCCATGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTAATCCCCAATGAGGTACCAACCATTGAACAAAGGGGAAAGAAAGACAAGGAAAAGAAGCCTGCTATTGTTGTTATTCAAGGTCCGAAGCCCGGGAAGCCAACCGATCTCTCGAGAATGCGTCAAATACATCTGAAACTCAAACACAATACCCCTCTTCACATGAAGCCTAAACCCCCACCAGCAGAACCTAAAGCCGAATCGAAAAAGGATTCTTCTGCAGCTGGGGCAACTCTGGCTGCAGGTTCGGGTTCGGCAGCTTCAAGAACTGCTGCTGTTGCTACTTCTGAGGGTAGAACTGTTGGCTGA

Protein sequence

MSTFAGTPPSPFDDATIGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG*

Homology

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BLAST of CSPI04G15780 vs. ExPASy Swiss-Prot
Match: O04209 (Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-55
Identity = 127/234 (54.27%), Postives = 165/234 (70.51%), Query Frame = 0


Query: 37  ESADDSSPIFGNL-------PYDQGDGVEPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGE 96
           + A +S P+ G+         +D    VE +    F+A    S + +  NG G  G  G+
Sbjct: 14  DDASESVPVSGSFDATDSFSAFDGSLQVEDSVDDVFAAPS--SDYGAYSNGDGIFGSNGD 73

Query: 97  SDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREMELLEEIIDEADQYKIEFYRRR 156
            DGPIL  P+ ME +EGF LREWRR NAI+LEEKEKRE ELL++II+EADQYK EF+++ 
Sbjct: 74  HDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELLKQIIEEADQYKEEFHKKI 133

Query: 157 KLALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIE-QRGKKDKE-- 216
           ++  +++KA NR+KEK YL NQEKF+AE+ KNYWKAIAEL+P EVPTIE +RGKK+++  
Sbjct: 134 EVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVPKEVPTIEKRRGKKEQQDP 193

Query: 217 KKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMK-PKPPPAEPKAESKKD 260
           KKP + VIQGPKPGKPTDL+RMRQI +KLKHN P H+K    PP+E  A   K+
Sbjct: 194 KKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQPPSEEAAAPPKN 245

[Close]

BLAST of CSPI04G15780 vs. ExPASy Swiss-Prot
Match: Q9SKU1 (Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.6e-51
Identity = 125/233 (53.65%), Postives = 149/233 (63.95%), Query Frame = 0


Query: 31  FSTFEAESADDSSPIFGNLPYDQGDGVEPTPPTNFSAGGGFSSFSSQQNGKGFDGGFG-- 90
           FS+F  + A  +   FG            +P  +FS+   F S  +  NG G  GG G  
Sbjct: 43  FSSFNGDPASPNGYGFG----------ASSPNHDFSS--PFESSVNDANGNG--GGSGGD 102

Query: 91  ---ESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREMELLEEIIDEADQYKIEF 150
               SDGPIL  P  M  EEGF  REWRRLN I LEEKEK+E E+  +II EA+ +K  F
Sbjct: 103 AIFASDGPILPDPNEMR-EEGFQRREWRRLNTIHLEEKEKKEKEMRNQIITEAEDFKKAF 162

Query: 151 YRRRKLALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIE-QRGKKD 210
           Y +R   ++ +K  NR+KEK Y ANQEKFH E DK+YWKAIAELIP EVP IE +RGKKD
Sbjct: 163 YEKRDKTIETNKTDNREKEKLYWANQEKFHKEVDKHYWKAIAELIPREVPNIEKKRGKKD 222

Query: 211 KEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPPPAEPKAESK 258
            +KKP++ VIQGPKPGKPTDL RMRQI LKLK N P HM P PPPA+   + K
Sbjct: 223 PDKKPSVNVIQGPKPGKPTDLGRMRQIFLKLKTNPPPHMMPPPPPAKDAKDGK 260

[Close]

BLAST of CSPI04G15780 vs. ExPASy Swiss-Prot
Match: Q5Z402 (Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.8e-50
Identity = 140/292 (47.95%), Postives = 171/292 (58.56%), Query Frame = 0


Query: 2   STFAGTPPSPFDDATIGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPTP 61
           S  A    SPFDD              ++F  F+A +A   +P     P  +     P  
Sbjct: 7   SPTASPAASPFDD--------------DSFLRFDA-AAPAPAPADAFPPSPEPYAFRPDA 66

Query: 62  PTNFSAGGGFSSFSSQQNGKGFDGGFGESD---GPILSSPTAMEPEEGFPLREWRRLNAI 121
           P+ F           + NG   D  F   D   GP+L  P  M  +EGF LREWRR NAI
Sbjct: 67  PSPFG--------MPEANGSLHDDPFAAPDNDNGPVLPPPNQMGADEGFLLREWRRQNAI 126

Query: 122 RLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEA 181
            LEEKEK+E E+  +II +A ++K  F  +RKL ++ SK  NR++EK YLANQEKFHA A
Sbjct: 127 LLEEKEKKEKEMRNQIILDAKEFKKAFVEKRKLNVETSKDQNREREKLYLANQEKFHAGA 186

Query: 182 DKNYWKAIAELIPNEVPTIEQRG---KKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKL 241
           DK YWKAI+ELIP+E+  IE+RG    KDKEKKP IVVIQGPKPGKPTD+SRMRQI LKL
Sbjct: 187 DKQYWKAISELIPHEIANIEKRGAKKDKDKEKKPGIVVIQGPKPGKPTDMSRMRQILLKL 246

Query: 242 KHNTPLHMKPKPPPAEPKAESKKDSSAA--GATLAAGSGSAASRTAAVATSE 286
           KH  P HMKP PPPA   A + KD +A   GA +AA +   AS   +V   E
Sbjct: 247 KHTPPPHMKPPPPPA---AATGKDGAAGKDGAKVAAAASKDASANGSVPEME 272

[Close]

BLAST of CSPI04G15780 vs. ExPASy Swiss-Prot
Match: F4J5M9 (Clathrin light chain 3 OS=Arabidopsis thaliana OX=3702 GN=At3g51890 PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.8e-50
Identity = 115/217 (53.00%), Postives = 145/217 (66.82%), Query Frame = 0


Query: 32  STFEAESADDSSPIFGNLPYDQGDGVEPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESD 91
           S F+++  D S   F + P  + D              G SS   +         F +++
Sbjct: 34  SRFQSQRFDSSFSNFDSQPEKESD-----------LPCGDSSPRPETQSPPSINSFDDTN 93

Query: 92  GPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREMELLEEIIDEADQYKIEFYRRRKL 151
             IL  P+AME EEGF LREWRRLNA+RLEEKEK E E++++I++ A+QYK EFY +R +
Sbjct: 94  DSILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILEAAEQYKAEFYSKRNV 153

Query: 152 ALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAI 211
            ++++K  NR+KEK +L NQEKF+AEADKN WKAIAELIP EVP IE RG  +K+K   I
Sbjct: 154 TIENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPREVPVIENRG--NKKKTATI 213

Query: 212 VVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPP 249
            VIQGPKPGKPTDLSRMRQ+  KLKHN P HMKPK P
Sbjct: 214 TVIQGPKPGKPTDLSRMRQVLTKLKHNPPTHMKPKLP 237

[Close]

BLAST of CSPI04G15780 vs. ExPASy Swiss-Prot
Match: Q7XKE9 (Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.3e-48
Identity = 116/212 (54.72%), Postives = 142/212 (66.98%), Query Frame = 0


Query: 58  EPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNA 117
           E  P  + S G   S FS        DGG    DGPIL  P  M  EEG  LREWRR NA
Sbjct: 68  EGVPIGHVSGGFSPSPFSPDPE---LDGG----DGPILPPPAQMGAEEGILLREWRRQNA 127

Query: 118 IRLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAE 177
           I LEEKE++E EL  +I+ EA+++K  FY +R    + +K  NR++EK ++A QEKFHAE
Sbjct: 128 IVLEEKERKEKELRAQILAEAEEFKKAFYEKRIQNCETNKVHNREREKIFVAGQEKFHAE 187

Query: 178 ADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKH 237
           ADK YWK+I+ELIP+E+ TIE+RGKKDK+KKP+I VIQGPKPGKPTDLSRMRQI +KLKH
Sbjct: 188 ADKQYWKSISELIPHEIATIEKRGKKDKDKKPSITVIQGPKPGKPTDLSRMRQILVKLKH 247

Query: 238 NTPLHMKPKPPPAEPKAESKKDSSAAGATLAA 270
             P HM  +PPPA    +  KD +  G    A
Sbjct: 248 APPPHMM-QPPPASAAKDGAKDGAKDGTPAPA 271

[Close]

BLAST of CSPI04G15780 vs. ExPASy TrEMBL
Match: A0A0A0KZX1 (Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_4G308590 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.0e-154
Identity = 289/290 (99.66%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 1   MSTFAGTPPSPFDDATIGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT 60
           MSTFAGTPPSPFDDAT GFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT
Sbjct: 1   MSTFAGTPPSPFDDATNGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT 60

Query: 61  PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 291
           LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG
Sbjct: 241 LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 290

[Close]

BLAST of CSPI04G15780 vs. ExPASy TrEMBL
Match: A0A5A7TPG9 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00190 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145
Identity = 274/290 (94.48%), Postives = 281/290 (96.90%), Query Frame = 0


Query: 1   MSTFAGTPPSPFDDATIGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT 60
           MSTFAGT P PF+DATIGF+PRLASQRFETFSTF+AESADDSSPIFGNLPYD GD + PT
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAESADDSSPIFGNLPYDLGDDLPPT 60

Query: 61  PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSA GGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEK+E ELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 291
           LHMKPKPPPAEPK+ESKKDSSAAGATLAAGSG AASRTAAVATSEG TVG
Sbjct: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of CSPI04G15780 vs. ExPASy TrEMBL
Match: A0A1S3BLP9 (Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103491206 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145
Identity = 274/290 (94.48%), Postives = 281/290 (96.90%), Query Frame = 0


Query: 1   MSTFAGTPPSPFDDATIGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT 60
           MSTFAGT P PF+DATIGF+PRLASQRFETFSTF+AESADDSSPIFGNLPYD GD + PT
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAESADDSSPIFGNLPYDLGDDLPPT 60

Query: 61  PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSA GGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEK+E ELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 291
           LHMKPKPPPAEPK+ESKKDSSAAGATLAAGSG AASRTAAVATSEG TVG
Sbjct: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of CSPI04G15780 vs. ExPASy TrEMBL
Match: A0A5D3B8W6 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00900 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145
Identity = 274/290 (94.48%), Postives = 280/290 (96.55%), Query Frame = 0


Query: 1   MSTFAGTPPSPFDDATIGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT 60
           MSTFAGT P PF+DATIGFEPRLASQRFETFSTF+AESADDSSPIFGNLPYD GD + PT
Sbjct: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTFQAESADDSSPIFGNLPYDLGDDLPPT 60

Query: 61  PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSA GGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEK+E ELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 291
           LHMKPKPPPAEPK+ESKKDSSAAGATL AGSG AASRTAAVATSEG TVG
Sbjct: 241 LHMKPKPPPAEPKSESKKDSSAAGATLTAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of CSPI04G15780 vs. ExPASy TrEMBL
Match: A0A6J1DDM4 (Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111019409 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.2e-113
Identity = 233/306 (76.14%), Postives = 259/306 (84.64%), Query Frame = 0


Query: 1   MSTFAGTPPSPFDDATIGFEPRLASQRFETFSTFEAE----SADDSSPIFGNLPYDQGDG 60
           MSTFAG PP PFDD T G++PRL+SQRFE+FS FEAE    SA DSSPIFG+   +QGD 
Sbjct: 1   MSTFAGAPP-PFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60

Query: 61  V--------EPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFP 120
           +         P+PP+NFS  GGFS+FS +QNGKGFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYL 180
           LREWRRLNAIRLEEKEKRE ELL+EIIDEADQYKI+FYRRRKLALD++KA+NRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180

Query: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAIVVIQGPKPGKPTDLSRM
Sbjct: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMKPKPPP-AEPKAESKKDSS----AAGATLAAGSGSAASRT---AA 287
           RQIHLKLK NTPLHM+PKPPP +E K + K+DSS    AAGA+   GSGS++S T   AA
Sbjct: 241 RQIHLKLKRNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPKAAA 300

[Close]

BLAST of CSPI04G15780 vs. NCBI nr
Match: XP_004147885.1 (clathrin light chain 2 [Cucumis sativus] >KGN54369.1 hypothetical protein Csa_018069 [Cucumis sativus])

HSP 1 Score: 553.9 bits (1426), Expect = 8.2e-154
Identity = 289/290 (99.66%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 1   MSTFAGTPPSPFDDATIGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT 60
           MSTFAGTPPSPFDDAT GFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT
Sbjct: 1   MSTFAGTPPSPFDDATNGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT 60

Query: 61  PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 291
           LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG
Sbjct: 241 LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 290

[Close]

BLAST of CSPI04G15780 vs. NCBI nr
Match: XP_008449287.1 (PREDICTED: clathrin light chain 2-like [Cucumis melo] >KAA0045034.1 clathrin light chain 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 525.8 bits (1353), Expect = 2.4e-145
Identity = 274/290 (94.48%), Postives = 281/290 (96.90%), Query Frame = 0


Query: 1   MSTFAGTPPSPFDDATIGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT 60
           MSTFAGT P PF+DATIGF+PRLASQRFETFSTF+AESADDSSPIFGNLPYD GD + PT
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAESADDSSPIFGNLPYDLGDDLPPT 60

Query: 61  PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSA GGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEK+E ELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 291
           LHMKPKPPPAEPK+ESKKDSSAAGATLAAGSG AASRTAAVATSEG TVG
Sbjct: 241 LHMKPKPPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of CSPI04G15780 vs. NCBI nr
Match: TYJ96292.1 (clathrin light chain 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 525.4 bits (1352), Expect = 3.1e-145
Identity = 274/290 (94.48%), Postives = 280/290 (96.55%), Query Frame = 0


Query: 1   MSTFAGTPPSPFDDATIGFEPRLASQRFETFSTFEAESADDSSPIFGNLPYDQGDGVEPT 60
           MSTFAGT P PF+DATIGFEPRLASQRFETFSTF+AESADDSSPIFGNLPYD GD + PT
Sbjct: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTFQAESADDSSPIFGNLPYDLGDDLPPT 60

Query: 61  PPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120
           PPTNFSA GGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL
Sbjct: 61  PPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRL 120

Query: 121 EEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180
           EEKEK+E ELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK
Sbjct: 121 EEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADK 180

Query: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240
           NYWKAIAELIPNEVPTIEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLKHNTP
Sbjct: 181 NYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHNTP 240

Query: 241 LHMKPKPPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 291
           LHMKPKPPPAEPK+ESKKDSSAAGATL AGSG AASRTAAVATSEG TVG
Sbjct: 241 LHMKPKPPPAEPKSESKKDSSAAGATLTAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of CSPI04G15780 vs. NCBI nr
Match: XP_038882671.1 (clathrin light chain 2-like [Benincasa hispida] >XP_038882672.1 clathrin light chain 2-like [Benincasa hispida])

HSP 1 Score: 487.3 bits (1253), Expect = 9.4e-134
Identity = 261/297 (87.88%), Postives = 270/297 (90.91%), Query Frame = 0


Query: 1   MSTFAGTPPSPFDDATIGFEPRLASQRFETFSTFE----AESADDSSPIFGNLPYDQGDG 60
           MSTFAGTPP  FDD TIGFEPRLASQRFETFSTFE    A+SA DSSPIFGN+ Y+QGD 
Sbjct: 1   MSTFAGTPPPSFDDGTIGFEPRLASQRFETFSTFETESAADSAGDSSPIFGNMAYNQGDD 60

Query: 61  VEPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLN 120
           + PTPPTNFSA GGFSSFS QQNGKGFDGG+GESDGPILSSPTAMEPEEGFPLREWRRLN
Sbjct: 61  LSPTPPTNFSADGGFSSFSPQQNGKGFDGGYGESDGPILSSPTAMEPEEGFPLREWRRLN 120

Query: 121 AIRLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHA 180
           AIRLEEK KRE ELLEEIIDEADQYKIEFYRRRKLALD++K +NRDKEKQYLANQEKFHA
Sbjct: 121 AIRLEEKLKREKELLEEIIDEADQYKIEFYRRRKLALDNTKTSNRDKEKQYLANQEKFHA 180

Query: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 240
           EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQI LKLK
Sbjct: 181 EADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIQLKLK 240

Query: 241 HNTPLHMKPK---PPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 291
           HNTPLHMKPK   PPP EPK+ESKKDSSAAG T AAGSG A SRTAAVATSEG T G
Sbjct: 241 HNTPLHMKPKQPPPPPVEPKSESKKDSSAAGMTSAAGSGLATSRTAAVATSEGTTFG 297

[Close]

BLAST of CSPI04G15780 vs. NCBI nr
Match: XP_022151477.1 (clathrin light chain 2-like [Momordica charantia])

HSP 1 Score: 419.5 bits (1077), Expect = 2.4e-113
Identity = 233/306 (76.14%), Postives = 259/306 (84.64%), Query Frame = 0


Query: 1   MSTFAGTPPSPFDDATIGFEPRLASQRFETFSTFEAE----SADDSSPIFGNLPYDQGDG 60
           MSTFAG PP PFDD T G++PRL+SQRFE+FS FEAE    SA DSSPIFG+   +QGD 
Sbjct: 1   MSTFAGAPP-PFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60

Query: 61  V--------EPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFP 120
           +         P+PP+NFS  GGFS+FS +QNGKGFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYL 180
           LREWRRLNAIRLEEKEKRE ELL+EIIDEADQYKI+FYRRRKLALD++KA+NRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180

Query: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAIVVIQGPKPGKPTDLSRM
Sbjct: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMKPKPPP-AEPKAESKKDSS----AAGATLAAGSGSAASRT---AA 287
           RQIHLKLK NTPLHM+PKPPP +E K + K+DSS    AAGA+   GSGS++S T   AA
Sbjct: 241 RQIHLKLKRNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPKAAA 300

[Close]

BLAST of CSPI04G15780 vs. TAIR 10
Match: AT2G40060.1 (Clathrin light chain protein )

HSP 1 Score: 218.4 bits (555), Expect = 7.6e-57
Identity = 127/234 (54.27%), Postives = 165/234 (70.51%), Query Frame = 0


Query: 37  ESADDSSPIFGNL-------PYDQGDGVEPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGE 96
           + A +S P+ G+         +D    VE +    F+A    S + +  NG G  G  G+
Sbjct: 14  DDASESVPVSGSFDATDSFSAFDGSLQVEDSVDDVFAAPS--SDYGAYSNGDGIFGSNGD 73

Query: 97  SDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREMELLEEIIDEADQYKIEFYRRR 156
            DGPIL  P+ ME +EGF LREWRR NAI+LEEKEKRE ELL++II+EADQYK EF+++ 
Sbjct: 74  HDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELLKQIIEEADQYKEEFHKKI 133

Query: 157 KLALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIE-QRGKKDKE-- 216
           ++  +++KA NR+KEK YL NQEKF+AE+ KNYWKAIAEL+P EVPTIE +RGKK+++  
Sbjct: 134 EVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVPKEVPTIEKRRGKKEQQDP 193

Query: 217 KKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMK-PKPPPAEPKAESKKD 260
           KKP + VIQGPKPGKPTDL+RMRQI +KLKHN P H+K    PP+E  A   K+
Sbjct: 194 KKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQPPSEEAAAPPKN 245

[Close]

BLAST of CSPI04G15780 vs. TAIR 10
Match: AT2G20760.1 (Clathrin light chain protein )

HSP 1 Score: 203.4 bits (516), Expect = 2.5e-52
Identity = 125/233 (53.65%), Postives = 149/233 (63.95%), Query Frame = 0


Query: 31  FSTFEAESADDSSPIFGNLPYDQGDGVEPTPPTNFSAGGGFSSFSSQQNGKGFDGGFG-- 90
           FS+F  + A  +   FG            +P  +FS+   F S  +  NG G  GG G  
Sbjct: 43  FSSFNGDPASPNGYGFG----------ASSPNHDFSS--PFESSVNDANGNG--GGSGGD 102

Query: 91  ---ESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREMELLEEIIDEADQYKIEF 150
               SDGPIL  P  M  EEGF  REWRRLN I LEEKEK+E E+  +II EA+ +K  F
Sbjct: 103 AIFASDGPILPDPNEMR-EEGFQRREWRRLNTIHLEEKEKKEKEMRNQIITEAEDFKKAF 162

Query: 151 YRRRKLALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIE-QRGKKD 210
           Y +R   ++ +K  NR+KEK Y ANQEKFH E DK+YWKAIAELIP EVP IE +RGKKD
Sbjct: 163 YEKRDKTIETNKTDNREKEKLYWANQEKFHKEVDKHYWKAIAELIPREVPNIEKKRGKKD 222

Query: 211 KEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPPPAEPKAESK 258
            +KKP++ VIQGPKPGKPTDL RMRQI LKLK N P HM P PPPA+   + K
Sbjct: 223 PDKKPSVNVIQGPKPGKPTDLGRMRQIFLKLKTNPPPHMMPPPPPAKDAKDGK 260

[Close]

BLAST of CSPI04G15780 vs. TAIR 10
Match: AT3G51890.1 (Clathrin light chain protein )

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-51
Identity = 115/217 (53.00%), Postives = 145/217 (66.82%), Query Frame = 0


Query: 32  STFEAESADDSSPIFGNLPYDQGDGVEPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESD 91
           S F+++  D S   F + P  + D              G SS   +         F +++
Sbjct: 34  SRFQSQRFDSSFSNFDSQPEKESD-----------LPCGDSSPRPETQSPPSINSFDDTN 93

Query: 92  GPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREMELLEEIIDEADQYKIEFYRRRKL 151
             IL  P+AME EEGF LREWRRLNA+RLEEKEK E E++++I++ A+QYK EFY +R +
Sbjct: 94  DSILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILEAAEQYKAEFYSKRNV 153

Query: 152 ALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAI 211
            ++++K  NR+KEK +L NQEKF+AEADKN WKAIAELIP EVP IE RG  +K+K   I
Sbjct: 154 TIENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPREVPVIENRG--NKKKTATI 213

Query: 212 VVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMKPKPP 249
            VIQGPKPGKPTDLSRMRQ+  KLKHN P HMKPK P
Sbjct: 214 TVIQGPKPGKPTDLSRMRQVLTKLKHNPPTHMKPKLP 237

The following BLAST results are available for this feature:

BLAST of CSPI04G15780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04209	1.1e-55	54.27	Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1	[more]
Q9SKU1	3.6e-51	53.65	Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1	[more]
Q5Z402	1.8e-50	47.95	Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 ...	[more]
F4J5M9	1.8e-50	53.00	Clathrin light chain 3 OS=Arabidopsis thaliana OX=3702 GN=At3g51890 PE=1 SV=1	[more]
Q7XKE9	1.3e-48	54.72	Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 ...	[more]

BLAST of CSPI04G15780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZX1	4.0e-154	99.66	Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_4G308590 PE=3 SV=1	[more]
A0A5A7TPG9	1.2e-145	94.48	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G...	[more]
A0A1S3BLP9	1.2e-145	94.48	Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103491206 PE=3 SV=1	[more]
A0A5D3B8W6	1.5e-145	94.48	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold782...	[more]
A0A6J1DDM4	1.2e-113	76.14	Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111019409 PE=3 SV=1	[more]

BLAST of CSPI04G15780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147885.1	8.2e-154	99.66	clathrin light chain 2 [Cucumis sativus] >KGN54369.1 hypothetical protein Csa_01...	[more]
XP_008449287.1	2.4e-145	94.48	PREDICTED: clathrin light chain 2-like [Cucumis melo] >KAA0045034.1 clathrin lig...	[more]
TYJ96292.1	3.1e-145	94.48	clathrin light chain 2-like [Cucumis melo var. makuwa]	[more]
XP_038882671.1	9.4e-134	87.88	clathrin light chain 2-like [Benincasa hispida] >XP_038882672.1 clathrin light c...	[more]
XP_022151477.1	2.4e-113	76.14	clathrin light chain 2-like [Momordica charantia]	[more]

BLAST of CSPI04G15780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40060.1	7.6e-57	54.27	Clathrin light chain protein	[more]
AT2G20760.1	2.5e-52	53.65	Clathrin light chain protein	[more]
AT3G51890.1	1.3e-51	53.00	Clathrin light chain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 117..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..290
None	No IPR available	PANTHER	PTHR10639:SF24	CLATHRIN LIGHT CHAIN 3	coord: 11..278
IPR000996	Clathrin light chain	PFAM	PF01086	Clathrin_lg_ch	coord: 96..207 e-value: 9.0E-11 score: 42.2
IPR000996	Clathrin light chain	PANTHER	PTHR10639	CLATHRIN LIGHT CHAIN	coord: 11..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G15780.1	CSPI04G15780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048268	clathrin coat assembly
biological_process	GO:0072583	clathrin-dependent endocytosis
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030132	clathrin coat of coated pit
cellular_component	GO:0030130	clathrin coat of trans-Golgi network vesicle
molecular_function	GO:0032050	clathrin heavy chain binding
molecular_function	GO:0005198	structural molecule activity