CSPI04G15030 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G15030
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	NAC domain-containing protein
Location	Chr4: 12549904 .. 12550963 (+)
RNA-Seq Expression	CSPI04G15030
Synteny	CSPI04G15030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTTCAAGTGGTTATTTACCATTACCATTGAATCATTACGTTGGCGTCAAGTTTAGGCCTACCGACCAACAACTTCTTCATTATCTTCATTGTAAGATTTATGGTCAGCCTTATTTTCAAGGAGCTGTTTTCGACTTTGATCTTTATGGTGGAGTAGAACCATGGGAAATCTGGCAAAGTTTTGGAGGAATTGATGGTGAAGATCTTTACTTCTTCACTAAGCTCAAGAGATCAACAACTAGCTCTGGAAATTTGTCTACTCACATTAACCGCAAGATTGGGCTCGTCAATGGTACTTGGAGTGGCGAGAATTCAGCTAGTCCAATTTATGTTAACAAAGATCATGAACAAATAATTGGTTATCGCAAGCGCTTTAGGTATGTGTTTCGGTTTTCGTTTTTGTTAAACTAGTTCTCAATATATATGTGTCATTGTTGGGTTTGTTTTAAGCTATTAGGGAATTGTCAAGGTATTTCTCTATTTGGTATTTTGTGATAAATAATATAATTTTGTAAATTATAGGTATGAGAATGAGTCGTTGGAAGAACACCATGGTGAATGGATAATGCATGAATATAGCTTGCATCCAGATTATTTAAGGTGTGAAGGTGTGGATCCCAATTATGTTTTATGTCGAATAAGGAAGAATGAAAGGGCTAAAAGAAAATTAGAAACTCAAAGTGAGCTGAAACAATCAAACAAGAAAAGAATGAAGGTACCTGAGATCTCTAATAATGAAAGACCAAAAGCAAAAACAAAGAAAAGATGTGACGAGTTACAACCAATAGATCAAAGAGCAATAATATGTGAAACAATCTACAACTCGGATATCAGACATGATGTGAATACTCATCAAGATATTACTGTTGTGGATCATGTGCCAAATATGACCACTAATCAAGATAACATAAATGAAAAGAATAGTTTGGGTACCAAAGAATACGTACCTTGCATGTCCATTGACGACGAATTGAGAGATGAGTTCAACAATGTTGACTTTTCTACTTATTTTCAAAACAACTTCAATGAGACATCATGTACTTTCAAAGTTTGA

mRNA sequence

ATGGATTCTTCAAGTGGTTATTTACCATTACCATTGAATCATTACGTTGGCGTCAAGTTTAGGCCTACCGACCAACAACTTCTTCATTATCTTCATTGTAAGATTTATGGTCAGCCTTATTTTCAAGGAGCTGTTTTCGACTTTGATCTTTATGGTGGAGTAGAACCATGGGAAATCTGGCAAAGTTTTGGAGGAATTGATGGTGAAGATCTTTACTTCTTCACTAAGCTCAAGAGATCAACAACTAGCTCTGGAAATTTGTCTACTCACATTAACCGCAAGATTGGGCTCGTCAATGGTACTTGGAGTGGCGAGAATTCAGCTAGTCCAATTTATGTTAACAAAGATCATGAACAAATAATTGGTTATCGCAAGCGCTTTAGGTATGAGAATGAGTCGTTGGAAGAACACCATGGTGAATGGATAATGCATGAATATAGCTTGCATCCAGATTATTTAAGGTGTGAAGGTGTGGATCCCAATTATGTTTTATGTCGAATAAGGAAGAATGAAAGGGCTAAAAGAAAATTAGAAACTCAAAGTGAGCTGAAACAATCAAACAAGAAAAGAATGAAGGTACCTGAGATCTCTAATAATGAAAGACCAAAAGCAAAAACAAAGAAAAGATGTGACGAGTTACAACCAATAGATCAAAGAGCAATAATATGTGAAACAATCTACAACTCGGATATCAGACATGATGTGAATACTCATCAAGATATTACTGTTGTGGATCATGTGCCAAATATGACCACTAATCAAGATAACATAAATGAAAAGAATAGTTTGGGTACCAAAGAATACGTACCTTGCATGTCCATTGACGACGAATTGAGAGATGAGTTCAACAATGTTGACTTTTCTACTTATTTTCAAAACAACTTCAATGAGACATCATGTACTTTCAAAGTTTGA

Coding sequence (CDS)

ATGGATTCTTCAAGTGGTTATTTACCATTACCATTGAATCATTACGTTGGCGTCAAGTTTAGGCCTACCGACCAACAACTTCTTCATTATCTTCATTGTAAGATTTATGGTCAGCCTTATTTTCAAGGAGCTGTTTTCGACTTTGATCTTTATGGTGGAGTAGAACCATGGGAAATCTGGCAAAGTTTTGGAGGAATTGATGGTGAAGATCTTTACTTCTTCACTAAGCTCAAGAGATCAACAACTAGCTCTGGAAATTTGTCTACTCACATTAACCGCAAGATTGGGCTCGTCAATGGTACTTGGAGTGGCGAGAATTCAGCTAGTCCAATTTATGTTAACAAAGATCATGAACAAATAATTGGTTATCGCAAGCGCTTTAGGTATGAGAATGAGTCGTTGGAAGAACACCATGGTGAATGGATAATGCATGAATATAGCTTGCATCCAGATTATTTAAGGTGTGAAGGTGTGGATCCCAATTATGTTTTATGTCGAATAAGGAAGAATGAAAGGGCTAAAAGAAAATTAGAAACTCAAAGTGAGCTGAAACAATCAAACAAGAAAAGAATGAAGGTACCTGAGATCTCTAATAATGAAAGACCAAAAGCAAAAACAAAGAAAAGATGTGACGAGTTACAACCAATAGATCAAAGAGCAATAATATGTGAAACAATCTACAACTCGGATATCAGACATGATGTGAATACTCATCAAGATATTACTGTTGTGGATCATGTGCCAAATATGACCACTAATCAAGATAACATAAATGAAAAGAATAGTTTGGGTACCAAAGAATACGTACCTTGCATGTCCATTGACGACGAATTGAGAGATGAGTTCAACAATGTTGACTTTTCTACTTATTTTCAAAACAACTTCAATGAGACATCATGTACTTTCAAAGTTTGA

Protein sequence

MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNERAKRKLETQSELKQSNKKRMKVPEISNNERPKAKTKKRCDELQPIDQRAIICETIYNSDIRHDVNTHQDITVVDHVPNMTTNQDNINEKNSLGTKEYVPCMSIDDELRDEFNNVDFSTYFQNNFNETSCTFKV*

Homology

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BLAST of CSPI04G15030 vs. ExPASy Swiss-Prot
Match: Q9C878 (Protein BEARSKIN1 OS=Arabidopsis thaliana OX=3702 GN=BRN1 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-06
Identity = 50/177 (28.25%), Postives = 80/177 (45.20%), Query Frame = 0


Query: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLH-YLHCKIYGQPYFQGAVFDFDLYGGVEPWEI 60
           M SS+G +P       G +F PTD++LLH YL  KI  + +    + + DL   +EPW++
Sbjct: 1   MSSSNGGVP------PGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDL-NKIEPWDL 60

Query: 61  WQ--SFGGIDGEDLYFFTKLKRS--TTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNK 120
                 G     + YFF+   R   T S  N +TH        +G W        I   +
Sbjct: 61  QDRCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATH--------SGFWKATGRDKCI---R 120

Query: 121 DHEQIIGYRKRF-RYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNE 172
           +  + IG RK    Y+  +      +WIMHEY +  +    +  +  +V+CR+ K +
Sbjct: 121 NSYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRI--EDTEDDPCEDGWVVCRVFKKK 157

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BLAST of CSPI04G15030 vs. ExPASy Swiss-Prot
Match: Q9SV87 (Protein BEARSKIN2 OS=Arabidopsis thaliana OX=3702 GN=BRN2 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06
Identity = 51/172 (29.65%), Postives = 77/172 (44.77%), Query Frame = 0


Query: 3   SSSGYLPLPLNHYVGVKFRPTDQQLLH-YLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 62
           SS+G +P       G +F PTD++LLH YL  KI  Q +    + + DL   +EPW++ +
Sbjct: 4   SSNGGVP------PGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDL-NKLEPWDLQE 63

Query: 63  --SFGGIDGEDLYFFTKLKRS--TTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDH 122
               G     + YFF+   R   T S  N +TH         G W        I   ++ 
Sbjct: 64  RCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATHA--------GFWKATGRDKCI---RNS 123

Query: 123 EQIIGYRKRF-RYENESLEEHHGEWIMHEYSLH-PDYLRCEGVDPNYVLCRI 168
            + IG RK    Y+  +      +WIMHEY L   D  +    +  +V+CR+
Sbjct: 124 YKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRV 157

[Close]

BLAST of CSPI04G15030 vs. ExPASy TrEMBL
Match: A0A0A0KXM1 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 3.7e-171
Identity = 296/306 (96.73%), Postives = 300/306 (98.04%), Query Frame = 0


Query: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60
           MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW
Sbjct: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QSFGGIDGEDLYFFTKLKRSTTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQI 120
           QSFGGIDGEDLYFFTKLKRSTT+SGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQI
Sbjct: 61  QSFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQI 120

Query: 121 IGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNERAKRKLETQ 180
           IGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKN+RAKRKLET+
Sbjct: 121 IGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRKLETE 180

Query: 181 SELKQSNKKRMKVPEISNNERPKA--KTKKRCDELQPIDQRAIICETIYNSDIRHDVNTH 240
           SELKQSNKKRMKV EISNNERPKA  KTKKRCDELQPIDQRAIICETIYNSDIRHDVNTH
Sbjct: 181 SELKQSNKKRMKVREISNNERPKAKTKTKKRCDELQPIDQRAIICETIYNSDIRHDVNTH 240

Query: 241 QDITVVDHVPNMTTNQDNINEKNSLGTKEYVPCMSIDDELRDEFNNVDFSTYFQNNFNET 300
           QDITVVDHVPNMTTNQDNINE  SLGTKEYVPCMS D+ELRDEFNNVDFSTYFQNNFNET
Sbjct: 241 QDITVVDHVPNMTTNQDNINENTSLGTKEYVPCMSTDNELRDEFNNVDFSTYFQNNFNET 300

Query: 301 SCTFKV 305
           SCTFKV
Sbjct: 301 SCTFKV 306

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BLAST of CSPI04G15030 vs. ExPASy TrEMBL
Match: A0A0A0LFJ5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 6.9e-149
Identity = 261/305 (85.57%), Postives = 281/305 (92.13%), Query Frame = 0


Query: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60
           MDSSSG LPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW
Sbjct: 1   MDSSSGSLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QSFGGIDGEDLYFFTKLKRSTTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQI 120
           QSFGGIDGEDLYFFTKLKRSTT+SGNLSTHINRKIGLVNGTWSGENSASPIYVN+D +QI
Sbjct: 61  QSFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQI 120

Query: 121 IGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNERAKRKLETQ 180
           IGYRKRFRYENES EEHHGEWIMHEY+LHP+YL CEGVDPNYVLCRIR+NERA+RKLE Q
Sbjct: 121 IGYRKRFRYENESSEEHHGEWIMHEYNLHPNYL-CEGVDPNYVLCRIRRNERARRKLEIQ 180

Query: 181 SELKQSNKKRMKVPEISNNERPKAKTKKRCDELQPI-DQRAIICETIYNSDIRHDVNTHQ 240
            ELKQ NKKR+K P+IS NERPKAKT++RCDELQPI DQRAI CETIYNSDIRHD+ THQ
Sbjct: 181 GELKQPNKKRIKAPKISRNERPKAKTRERCDELQPIDDQRAITCETIYNSDIRHDMKTHQ 240

Query: 241 DITVVDHVPNMTTNQDNINEKNSLGTKEYVPCMSIDDELRDEFNNVDFSTYFQNNFNETS 300
           DI+VVD++PNMTTNQDNINE  SLGT++Y PCM  DDEL+D     +FSTY QNNF+ET 
Sbjct: 241 DISVVDYLPNMTTNQDNINENISLGTEDYEPCMLTDDELKDIQTLGEFSTYIQNNFDETL 300

Query: 301 CTFKV 305
           CTFKV
Sbjct: 301 CTFKV 304

[Close]

BLAST of CSPI04G15030 vs. ExPASy TrEMBL
Match: A0A0A0M0I5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G652300 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.3e-136
Identity = 243/304 (79.93%), Postives = 261/304 (85.86%), Query Frame = 0


Query: 2   DSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 61
           +SS GYLPLPLNHYVG+KFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ
Sbjct: 32  NSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 91

Query: 62  SFGGIDGEDLYFFTKLKRSTTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQII 121
           SFGGIDGEDLYFFTKLKRSTT+ GNLSTH+NRKIGLVNGTWSGENSASPIYVN++ E+II
Sbjct: 92  SFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEII 151

Query: 122 GYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNERAKRK-LETQ 181
           GYRKRFRYENESLEEHHGEWIMHEYS+H  YLRCEGVD NYVLCR+RKNER KRK LE Q
Sbjct: 152 GYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQ 211

Query: 182 SELKQSNKKRMKVPEISNNERPKAKTKKRCDELQPIDQRAIICETIYNSDIRHDVNTHQD 241
            E KQ NKKR+K P IS+NE        RCDELQPIDQRA  CETIYN DIR D+NTHQD
Sbjct: 212 GEAKQPNKKRIKAPHISDNE--------RCDELQPIDQRATTCETIYNLDIRPDMNTHQD 271

Query: 242 ITVVDHVPNMTTNQDNINEKNSLGTKEYVPCMSIDDELRDEFNNVDFSTYFQNNFNETSC 301
           I+VVD VPNMTTNQDN NE  SLG ++YVPCM  DDE +D     +F TY QNNF+ET  
Sbjct: 272 ISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDEFKDIRTLDEFCTYIQNNFDETLS 327

Query: 302 TFKV 305
           TFKV
Sbjct: 332 TFKV 327

[Close]

BLAST of CSPI04G15030 vs. ExPASy TrEMBL
Match: A0A5D3BNU6 (Protein SOMBRERO-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00160 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.7e-118
Identity = 218/304 (71.71%), Postives = 243/304 (79.93%), Query Frame = 0


Query: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60
           MDSSSGYLPLP +H VGVKFRPTDQQLLHYL CKIY QPYFQGAVFDFDLYGG+EPWEIW
Sbjct: 1   MDSSSGYLPLPFSHCVGVKFRPTDQQLLHYLRCKIYDQPYFQGAVFDFDLYGGIEPWEIW 60

Query: 61  QSFGGIDGEDLYFFTKLKRSTTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNK-DHEQ 120
           QSF GIDGEDLYFFTKLKRSTT+SGNLSTHINRKIG  NGTWSGENSA+PIY N+ DHEQ
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQ 120

Query: 121 IIGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNERAKRKLET 180
           IIGYRKRFRYEN+ L+EHHGEWIMHEYSLH D+L+C+GVDPNYVLCRIRKNERAKRKL+ 
Sbjct: 121 IIGYRKRFRYENDQLQEHHGEWIMHEYSLHQDHLKCQGVDPNYVLCRIRKNERAKRKLKV 180

Query: 181 QSELKQSNKKRMKVPEISNNERPKAKTKKRCDELQPIDQRAIICETIYNSDIRHDVNTHQ 240
           Q ELKQ NKKR+  P                D+LQPI+   I  ETIYNS+I HD+ THQ
Sbjct: 181 QRELKQPNKKRIMAP----------------DQLQPINHGVITRETIYNSNIMHDMTTHQ 240

Query: 241 DITVVDHVPNMTTNQDNINEKNSLGTKEYVPCMSIDDELR-----DEFNNVDFSTYFQNN 299
           D +VVDHV NMTTNQ+N N   SLG    + CM  +DE +     DE +++DFS+Y  NN
Sbjct: 241 DTSVVDHVTNMTTNQNNTNASTSLGAL-CLTCMPTNDEWKDIINLDELDDIDFSSYVPNN 287

[Close]

BLAST of CSPI04G15030 vs. ExPASy TrEMBL
Match: A0A1S3B941 (protein SOMBRERO-like OS=Cucumis melo OX=3656 GN=LOC103487114 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.5e-116
Identity = 216/304 (71.05%), Postives = 241/304 (79.28%), Query Frame = 0


Query: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60
           MDSSSGYLPLP +H VGVKFRPTDQQLL YL CKIY QPYFQGAVFDFDLYGG+EPWEIW
Sbjct: 1   MDSSSGYLPLPFSHCVGVKFRPTDQQLLRYLCCKIYDQPYFQGAVFDFDLYGGIEPWEIW 60

Query: 61  QSFGGIDGEDLYFFTKLKRSTTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNK-DHEQ 120
           QSF GIDGEDLYFFTKLKRSTT+SGNLSTHINRKIG  NGTWSGENSA+PIY N+ DHEQ
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQ 120

Query: 121 IIGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNERAKRKLET 180
           IIGYRKRFRYEN+ L+EHHGEWIMHEYSLH D+L+C+GVDPNYVLCRIRKNERAKRKL+ 
Sbjct: 121 IIGYRKRFRYENDQLQEHHGEWIMHEYSLHQDHLKCQGVDPNYVLCRIRKNERAKRKLKV 180

Query: 181 QSELKQSNKKRMKVPEISNNERPKAKTKKRCDELQPIDQRAIICETIYNSDIRHDVNTHQ 240
           Q ELKQ NKKR+  P                D+LQPI+   I  ETIYNS+I HD+ THQ
Sbjct: 181 QRELKQPNKKRIMAP----------------DQLQPINHGVITRETIYNSNIMHDMTTHQ 240

Query: 241 DITVVDHVPNMTTNQDNINEKNSLGTKEYVPCMSIDDELR-----DEFNNVDFSTYFQNN 299
           D +VVDHV NMTTNQDN N   SLG    + C   +DE +     DE +++DFS+Y  NN
Sbjct: 241 DTSVVDHVTNMTTNQDNTNASTSLGAL-CLTCTPTNDEWKDIINLDELDDIDFSSYVPNN 287

[Close]

BLAST of CSPI04G15030 vs. NCBI nr
Match: XP_004142192.1 (NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical protein Csa_017977 [Cucumis sativus])

HSP 1 Score: 610.5 bits (1573), Expect = 7.7e-171
Identity = 296/306 (96.73%), Postives = 300/306 (98.04%), Query Frame = 0


Query: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60
           MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW
Sbjct: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QSFGGIDGEDLYFFTKLKRSTTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQI 120
           QSFGGIDGEDLYFFTKLKRSTT+SGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQI
Sbjct: 61  QSFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQI 120

Query: 121 IGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNERAKRKLETQ 180
           IGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKN+RAKRKLET+
Sbjct: 121 IGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRKLETE 180

Query: 181 SELKQSNKKRMKVPEISNNERPKA--KTKKRCDELQPIDQRAIICETIYNSDIRHDVNTH 240
           SELKQSNKKRMKV EISNNERPKA  KTKKRCDELQPIDQRAIICETIYNSDIRHDVNTH
Sbjct: 181 SELKQSNKKRMKVREISNNERPKAKTKTKKRCDELQPIDQRAIICETIYNSDIRHDVNTH 240

Query: 241 QDITVVDHVPNMTTNQDNINEKNSLGTKEYVPCMSIDDELRDEFNNVDFSTYFQNNFNET 300
           QDITVVDHVPNMTTNQDNINE  SLGTKEYVPCMS D+ELRDEFNNVDFSTYFQNNFNET
Sbjct: 241 QDITVVDHVPNMTTNQDNINENTSLGTKEYVPCMSTDNELRDEFNNVDFSTYFQNNFNET 300

Query: 301 SCTFKV 305
           SCTFKV
Sbjct: 301 SCTFKV 306

[Close]

BLAST of CSPI04G15030 vs. NCBI nr
Match: XP_011652873.2 (NAC transcription factor 56 [Cucumis sativus])

HSP 1 Score: 535.4 bits (1378), Expect = 3.2e-148
Identity = 260/305 (85.25%), Postives = 281/305 (92.13%), Query Frame = 0


Query: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60
           MDSSSG LPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW
Sbjct: 1   MDSSSGSLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QSFGGIDGEDLYFFTKLKRSTTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQI 120
           +SFGGIDGEDLYFFTKLKRSTT+SGNLSTHINRKIGLVNGTWSGENSASPIYVN+D +QI
Sbjct: 61  ESFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQI 120

Query: 121 IGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNERAKRKLETQ 180
           IGYRKRFRYENES EEHHGEWIMHEY+LHP+YL CEGVDPNYVLCRIR+NERA+RKLE Q
Sbjct: 121 IGYRKRFRYENESSEEHHGEWIMHEYNLHPNYL-CEGVDPNYVLCRIRRNERARRKLEIQ 180

Query: 181 SELKQSNKKRMKVPEISNNERPKAKTKKRCDELQPI-DQRAIICETIYNSDIRHDVNTHQ 240
            ELKQ NKKR+K P+IS NERPKAKT++RCDELQPI DQRAI CETIYNSDIRHD+ THQ
Sbjct: 181 GELKQPNKKRIKAPKISRNERPKAKTRERCDELQPIDDQRAITCETIYNSDIRHDMKTHQ 240

Query: 241 DITVVDHVPNMTTNQDNINEKNSLGTKEYVPCMSIDDELRDEFNNVDFSTYFQNNFNETS 300
           DI+VVD++PNMTTNQDNINE  SLGT++Y PCM  DDEL+D     +FSTY QNNF+ET 
Sbjct: 241 DISVVDYLPNMTTNQDNINENISLGTEDYEPCMLTDDELKDIQTLGEFSTYIQNNFDETL 300

Query: 301 CTFKV 305
           CTFKV
Sbjct: 301 CTFKV 304

[Close]

BLAST of CSPI04G15030 vs. NCBI nr
Match: XP_004139160.1 (NAC domain-containing protein 105 [Cucumis sativus] >KAE8653567.1 hypothetical protein Csa_006844 [Cucumis sativus])

HSP 1 Score: 495.0 bits (1273), Expect = 4.7e-136
Identity = 243/304 (79.93%), Postives = 261/304 (85.86%), Query Frame = 0


Query: 2   DSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 61
           +SS GYLPLPLNHYVG+KFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ
Sbjct: 6   NSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 65

Query: 62  SFGGIDGEDLYFFTKLKRSTTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQII 121
           SFGGIDGEDLYFFTKLKRSTT+ GNLSTH+NRKIGLVNGTWSGENSASPIYVN++ E+II
Sbjct: 66  SFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEII 125

Query: 122 GYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNERAKRK-LETQ 181
           GYRKRFRYENESLEEHHGEWIMHEYS+H  YLRCEGVD NYVLCR+RKNER KRK LE Q
Sbjct: 126 GYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQ 185

Query: 182 SELKQSNKKRMKVPEISNNERPKAKTKKRCDELQPIDQRAIICETIYNSDIRHDVNTHQD 241
            E KQ NKKR+K P IS+NE        RCDELQPIDQRA  CETIYN DIR D+NTHQD
Sbjct: 186 GEAKQPNKKRIKAPHISDNE--------RCDELQPIDQRATTCETIYNLDIRPDMNTHQD 245

Query: 242 ITVVDHVPNMTTNQDNINEKNSLGTKEYVPCMSIDDELRDEFNNVDFSTYFQNNFNETSC 301
           I+VVD VPNMTTNQDN NE  SLG ++YVPCM  DDE +D     +F TY QNNF+ET  
Sbjct: 246 ISVVDRVPNMTTNQDNRNENTSLGIEDYVPCMPADDEFKDIRTLDEFCTYIQNNFDETLS 301

Query: 302 TFKV 305
           TFKV
Sbjct: 306 TFKV 301

[Close]

BLAST of CSPI04G15030 vs. NCBI nr
Match: KAA0053644.1 (protein SOMBRERO-like [Cucumis melo var. makuwa] >TYK00815.1 protein SOMBRERO-like [Cucumis melo var. makuwa])

HSP 1 Score: 435.6 bits (1119), Expect = 3.4e-118
Identity = 218/304 (71.71%), Postives = 243/304 (79.93%), Query Frame = 0


Query: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60
           MDSSSGYLPLP +H VGVKFRPTDQQLLHYL CKIY QPYFQGAVFDFDLYGG+EPWEIW
Sbjct: 1   MDSSSGYLPLPFSHCVGVKFRPTDQQLLHYLRCKIYDQPYFQGAVFDFDLYGGIEPWEIW 60

Query: 61  QSFGGIDGEDLYFFTKLKRSTTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNK-DHEQ 120
           QSF GIDGEDLYFFTKLKRSTT+SGNLSTHINRKIG  NGTWSGENSA+PIY N+ DHEQ
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQ 120

Query: 121 IIGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNERAKRKLET 180
           IIGYRKRFRYEN+ L+EHHGEWIMHEYSLH D+L+C+GVDPNYVLCRIRKNERAKRKL+ 
Sbjct: 121 IIGYRKRFRYENDQLQEHHGEWIMHEYSLHQDHLKCQGVDPNYVLCRIRKNERAKRKLKV 180

Query: 181 QSELKQSNKKRMKVPEISNNERPKAKTKKRCDELQPIDQRAIICETIYNSDIRHDVNTHQ 240
           Q ELKQ NKKR+  P                D+LQPI+   I  ETIYNS+I HD+ THQ
Sbjct: 181 QRELKQPNKKRIMAP----------------DQLQPINHGVITRETIYNSNIMHDMTTHQ 240

Query: 241 DITVVDHVPNMTTNQDNINEKNSLGTKEYVPCMSIDDELR-----DEFNNVDFSTYFQNN 299
           D +VVDHV NMTTNQ+N N   SLG    + CM  +DE +     DE +++DFS+Y  NN
Sbjct: 241 DTSVVDHVTNMTTNQNNTNASTSLGAL-CLTCMPTNDEWKDIINLDELDDIDFSSYVPNN 287

[Close]

BLAST of CSPI04G15030 vs. NCBI nr
Match: XP_008443554.1 (PREDICTED: protein SOMBRERO-like [Cucumis melo])

HSP 1 Score: 429.1 bits (1102), Expect = 3.2e-116
Identity = 216/304 (71.05%), Postives = 241/304 (79.28%), Query Frame = 0


Query: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60
           MDSSSGYLPLP +H VGVKFRPTDQQLL YL CKIY QPYFQGAVFDFDLYGG+EPWEIW
Sbjct: 1   MDSSSGYLPLPFSHCVGVKFRPTDQQLLRYLCCKIYDQPYFQGAVFDFDLYGGIEPWEIW 60

Query: 61  QSFGGIDGEDLYFFTKLKRSTTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNK-DHEQ 120
           QSF GIDGEDLYFFTKLKRSTT+SGNLSTHINRKIG  NGTWSGENSA+PIY N+ DHEQ
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQ 120

Query: 121 IIGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNERAKRKLET 180
           IIGYRKRFRYEN+ L+EHHGEWIMHEYSLH D+L+C+GVDPNYVLCRIRKNERAKRKL+ 
Sbjct: 121 IIGYRKRFRYENDQLQEHHGEWIMHEYSLHQDHLKCQGVDPNYVLCRIRKNERAKRKLKV 180

Query: 181 QSELKQSNKKRMKVPEISNNERPKAKTKKRCDELQPIDQRAIICETIYNSDIRHDVNTHQ 240
           Q ELKQ NKKR+  P                D+LQPI+   I  ETIYNS+I HD+ THQ
Sbjct: 181 QRELKQPNKKRIMAP----------------DQLQPINHGVITRETIYNSNIMHDMTTHQ 240

Query: 241 DITVVDHVPNMTTNQDNINEKNSLGTKEYVPCMSIDDELR-----DEFNNVDFSTYFQNN 299
           D +VVDHV NMTTNQDN N   SLG    + C   +DE +     DE +++DFS+Y  NN
Sbjct: 241 DTSVVDHVTNMTTNQDNTNASTSLGAL-CLTCTPTNDEWKDIINLDELDDIDFSSYVPNN 287

[Close]

BLAST of CSPI04G15030 vs. TAIR 10
Match: AT1G33280.1 (NAC domain containing protein 15 )

HSP 1 Score: 55.5 bits (132), Expect = 8.9e-08
Identity = 50/177 (28.25%), Postives = 80/177 (45.20%), Query Frame = 0


Query: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLH-YLHCKIYGQPYFQGAVFDFDLYGGVEPWEI 60
           M SS+G +P       G +F PTD++LLH YL  KI  + +    + + DL   +EPW++
Sbjct: 1   MSSSNGGVP------PGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDL-NKIEPWDL 60

Query: 61  WQ--SFGGIDGEDLYFFTKLKRS--TTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNK 120
                 G     + YFF+   R   T S  N +TH        +G W        I   +
Sbjct: 61  QDRCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATH--------SGFWKATGRDKCI---R 120

Query: 121 DHEQIIGYRKRF-RYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNE 172
           +  + IG RK    Y+  +      +WIMHEY +  +    +  +  +V+CR+ K +
Sbjct: 121 NSYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRI--EDTEDDPCEDGWVVCRVFKKK 157

[Close]

BLAST of CSPI04G15030 vs. TAIR 10
Match: AT4G10350.1 (NAC domain containing protein 70 )

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-07
Identity = 51/172 (29.65%), Postives = 77/172 (44.77%), Query Frame = 0


Query: 3   SSSGYLPLPLNHYVGVKFRPTDQQLLH-YLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 62
           SS+G +P       G +F PTD++LLH YL  KI  Q +    + + DL   +EPW++ +
Sbjct: 4   SSNGGVP------PGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDL-NKLEPWDLQE 63

Query: 63  --SFGGIDGEDLYFFTKLKRS--TTSSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDH 122
               G     + YFF+   R   T S  N +TH         G W        I   ++ 
Sbjct: 64  RCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATHA--------GFWKATGRDKCI---RNS 123

Query: 123 EQIIGYRKRF-RYENESLEEHHGEWIMHEYSLH-PDYLRCEGVDPNYVLCRI 168
            + IG RK    Y+  +      +WIMHEY L   D  +    +  +V+CR+
Sbjct: 124 YKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRV 157

The following BLAST results are available for this feature:

BLAST of CSPI04G15030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C878	1.3e-06	28.25	Protein BEARSKIN1 OS=Arabidopsis thaliana OX=3702 GN=BRN1 PE=2 SV=1	[more]
Q9SV87	1.6e-06	29.65	Protein BEARSKIN2 OS=Arabidopsis thaliana OX=3702 GN=BRN2 PE=2 SV=1	[more]

BLAST of CSPI04G15030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXM1	3.7e-171	96.73	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV...	[more]
A0A0A0LFJ5	6.9e-149	85.57	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV...	[more]
A0A0A0M0I5	2.3e-136	79.93	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G652300 PE=4 SV...	[more]
A0A5D3BNU6	1.7e-118	71.71	Protein SOMBRERO-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15...	[more]
A0A1S3B941	1.5e-116	71.05	protein SOMBRERO-like OS=Cucumis melo OX=3656 GN=LOC103487114 PE=4 SV=1	[more]

BLAST of CSPI04G15030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142192.1	7.7e-171	96.73	NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical prot...	[more]
XP_011652873.2	3.2e-148	85.25	NAC transcription factor 56 [Cucumis sativus]	[more]
XP_004139160.1	4.7e-136	79.93	NAC domain-containing protein 105 [Cucumis sativus] >KAE8653567.1 hypothetical p...	[more]
KAA0053644.1	3.4e-118	71.71	protein SOMBRERO-like [Cucumis melo var. makuwa] >TYK00815.1 protein SOMBRERO-li...	[more]
XP_008443554.1	3.2e-116	71.05	PREDICTED: protein SOMBRERO-like [Cucumis melo]	[more]

BLAST of CSPI04G15030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33280.1	8.9e-08	28.25	NAC domain containing protein 15	[more]
AT4G10350.1	1.2e-07	29.65	NAC domain containing protein 70	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 170..190
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 15..302
None	No IPR available	PANTHER	PTHR31989:SF220	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 15..302
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 16..148 e-value: 4.6E-19 score: 69.6
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 14..170 score: 22.58522
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 23..175 e-value: 3.4E-26 score: 93.9
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 12..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G15030.1	CSPI04G15030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding