CSPI04G15010 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G15010
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr4: 12540537 .. 12541024 (-)
RNA-Seq ExpressionCSPI04G15010
SyntenyCSPI04G15010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATGCAAAAACTAAATCATGTCAAAGATTCTACGTGGAGTTTGGTACTGACAATTAGTTCTTTTCAAGAAATATATATTATATTAAACATCAATTAAAAAGAAAGTCGTCAGAGTTTCGTAGAACAACACTTGAGCCCGTCGTTTGAGGAAGGGAACTCTAGGCGGCATCAACGTTTAATTTGTCGAAAGATGGAGGCGGCTTGATCCAGTTACGGAGGTGAGTTTAATTATTCTTTTTCTTTTTTAAATTGATATCTTGATTTTTAGAAAAGGAGGCTTTTAAGAATTCCTCATAGTATTTCATAATCCAGGAGCTTCTTGTTTGGGCTATCTTGGATTTGGAGATTGTTGATTGCTTTATTTCTGTCATCCCAGATTGTCCAGCAGGTGATAGCATAAATATGTTGATGAGATCCTCTTTAGAGCATGTTGAGCTGAGCATGCCAACGGTCTTTGAAGCTGTTGTAGTAGTCGGACTGGAT

mRNA sequence

ATGATGATGCAAAAACTAAATCATGTCAAAGATTCTACGTGGAGTTTGAGTTTCGTAGAACAACACTTGAGCCCGTCGTTTGAGGAAGGGAACTCTAGGCGGCATCAACTTACGGAGGAGCTTCTTGTTTGGGCTATCTTGGATTTGGAGATTGTTGATTGCTTTATTTCTGTCATCCCAGATTGTCCAGCAGGTGATAGCATAAATATGTTGATGAGATCCTCTTTAGAGCATGTTGAGCTGAGCATGCCAACGGTCTTTGAAGCTGTTGTAGTAGTCGGACTGGAT

Coding sequence (CDS)

ATGATGATGCAAAAACTAAATCATGTCAAAGATTCTACGTGGAGTTTGAGTTTCGTAGAACAACACTTGAGCCCGTCGTTTGAGGAAGGGAACTCTAGGCGGCATCAACTTACGGAGGAGCTTCTTGTTTGGGCTATCTTGGATTTGGAGATTGTTGATTGCTTTATTTCTGTCATCCCAGATTGTCCAGCAGGTGATAGCATAAATATGTTGATGAGATCCTCTTTAGAGCATGTTGAGCTGAGCATGCCAACGGTCTTTGAAGCTGTTGTAGTAGTCGGACTGGAT

Protein sequence

MMMQKLNHVKDSTWSLSFVEQHLSPSFEEGNSRRHQLTEELLVWAILDLEIVDCFISVIPDCPAGDSINMLMRSSLEHVELSMPTVFEAVVVVGLD
Homology
[Close]
BLAST of CSPI04G15010 vs. ExPASy TrEMBL
Match: A0A0A0L2B9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296880 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0 

Query: 1  MMMQKLNHVKDSTWSLSFVEQHLSPSFEEGNSRR-HQLTEELLVWAILDLEIVDCFISVI 60
          MMMQKLN+VKDSTWSLSFVEQHLSPSFEEGNSRR   +TEELLVWAILDLEIVDCFISVI
Sbjct: 1  MMMQKLNNVKDSTWSLSFVEQHLSPSFEEGNSRRLDPVTEELLVWAILDLEIVDCFISVI 60

Query: 61 PDCPAGDSINMLMRSSLEHVELSMPTVFEAVVVVGLD 97
          PDCPAGDSINMLMRSSLEHVE+SMPTVFEAVVVVGLD
Sbjct: 61 PDCPAGDSINMLMRSSLEHVEMSMPTVFEAVVVVGLD 97

[Close]
BLAST of CSPI04G15010 vs. NCBI nr
Match: KAE8649546.1 (hypothetical protein Csa_018019 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32
Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0 

Query: 17  SFVEQHLSPSFEEGNSRR-HQLTEELLVWAILDLEIVDCFISVIPDCPAGDSINMLMRSS 76
           SFVEQHLSPSFEEGNSRR   +TEELLVWAILDLEIVDCFISVIPDCPAGDSINMLMRSS
Sbjct: 223 SFVEQHLSPSFEEGNSRRLDPVTEELLVWAILDLEIVDCFISVIPDCPAGDSINMLMRSS 282

Query: 77  LEHVELSMPTVFEAVVVVGLD 97
           LEHVE+SMPTVFEAVVVVGLD
Sbjct: 283 LEHVEMSMPTVFEAVVVVGLD 303

The following BLAST results are available for this feature:
BLAST of CSPI04G15010 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G15010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2B91.1e-4193.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296880 PE=4 SV=1[more]
BLAST of CSPI04G15010 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649546.12.0e-3293.83hypothetical protein Csa_018019 [Cucumis sativus][more]
BLAST of CSPI04G15010 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G15010.1CSPI04G15010.1mRNA