CSPI04G14990 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G14990
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionEarly nodulin-75-like
LocationChr4: 12530182 .. 12530552 (-)
RNA-Seq ExpressionCSPI04G14990
SyntenyCSPI04G14990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTAATTCCCAAACATGAACAATCCATATGGTCATTACAGCTATGGTTATCCTTATCCTTATCCTCATCAAGGATACCCTAAGTACCAAGGTCAAGGTGTTCCTCCTAATCATAATTATGGTGCTGGATACACTAATTATCAGCATGGACATGTTCATCCTTATCCTTGTTATGATTATTCTTATCTTTATCAAGCATATCCTTATCCTCCACCATCAACAACACTTATTCCTCCTCAGTATAATTATCAGCAAAACTATGACACAAACATCAAAGGAGGAATTTTGGCATCCATGCTTTCTTCTGTCTCTGGGAATGGGAGTATTGCTTCTTTCGTCTCTTCCCTTTTCTTTAACTAAATAATTCAAAAA

mRNA sequence

GCTAATTCCCAAACATGAACAATCCATATGGTCATTACAGCTATGGTTATCCTTATCCTTATCCTCATCAAGGATACCCTAAGTACCAAGGTCAAGGTGTTCCTCCTAATCATAATTATGGTGCTGGATACACTAATTATCAGCATGGACATGTTCATCCTTATCCTTGTTATGATTATTCTTATCTTTATCAAGCATATCCTTATCCTCCACCATCAACAACACTTATTCCTCCTCAGTATAATTATCAGCAAAACTATGACACAAACATCAAAGGAGGAATTTTGGCATCCATGCTTTCTTCTGTCTCTGGGAATGGGAGTATTGCTTCTTTCGTCTCTTCCCTTTTCTTTAACTAAATAATTCAAAAA

Coding sequence (CDS)

ATGAACAATCCATATGGTCATTACAGCTATGGTTATCCTTATCCTTATCCTCATCAAGGATACCCTAAGTACCAAGGTCAAGGTGTTCCTCCTAATCATAATTATGGTGCTGGATACACTAATTATCAGCATGGACATGTTCATCCTTATCCTTGTTATGATTATTCTTATCTTTATCAAGCATATCCTTATCCTCCACCATCAACAACACTTATTCCTCCTCAGTATAATTATCAGCAAAACTATGACACAAACATCAAAGGAGGAATTTTGGCATCCATGCTTTCTTCTGTCTCTGGGAATGGGAGTATTGCTTCTTTCGTCTCTTCCCTTTTCTTTAACTAA

Protein sequence

MNNPYGHYSYGYPYPYPHQGYPKYQGQGVPPNHNYGAGYTNYQHGHVHPYPCYDYSYLYQAYPYPPPSTTLIPPQYNYQQNYDTNIKGGILASMLSSVSGNGSIASFVSSLFFN*
Homology
[Close]
BLAST of CSPI04G14990 vs. ExPASy TrEMBL
Match: A0A0A0KZN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296860 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56
Identity = 111/114 (97.37%), Postives = 111/114 (97.37%), Query Frame = 0 

Query: 1   MNNPYGHYSYGYPYPYPHQGYPKYQGQGVPPNHNYGAGYTNYQHGHVHPYPCYDYSYLYQ 60
           MNNPYGHYSYG  YPYPHQGYPKYQGQGVPPNHNYGAGYTNYQHGHVHPY CYDYSYLYQ
Sbjct: 1   MNNPYGHYSYG--YPYPHQGYPKYQGQGVPPNHNYGAGYTNYQHGHVHPYSCYDYSYLYQ 60

Query: 61  AYPYPPPSTTLIPPQYNYQQNYDTNIKGGILASMLSSVSGNGSIASFVSSLFFN 115
           AYPYPPPSTTLIPPQYNYQQNYDTNIKGGILASMLSSVSGNGSIASFVSSLFFN
Sbjct: 61  AYPYPPPSTTLIPPQYNYQQNYDTNIKGGILASMLSSVSGNGSIASFVSSLFFN 112

[Close]
BLAST of CSPI04G14990 vs. ExPASy TrEMBL
Match: A0A5A7TUH5 (Early nodulin-75-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00750 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.0e-44
Identity = 96/114 (84.21%), Postives = 99/114 (86.84%), Query Frame = 0 

Query: 1   MNNPYGHYSYGYPYPYPHQGYPKYQGQGVPPNHNYGAGYTNYQHGHVHPYPCYDYSYLYQ 60
           MNNPYG YSYG  YPYPHQGYPKYQGQGVPPN+ YGAGY NY HGHVHPYPCYDYS    
Sbjct: 1   MNNPYGCYSYG--YPYPHQGYPKYQGQGVPPNYKYGAGYINYGHGHVHPYPCYDYS---- 60

Query: 61  AYPYPPPSTTLIPPQYNYQQNYDTNIKGGILASMLSSVSGNGSIASFVSSLFFN 115
            YPYPPPSTTLIPPQYNYQQNY TNI  GIL SMLSSVSGNGSIASF+SSLFF+
Sbjct: 61  -YPYPPPSTTLIPPQYNYQQNYGTNITEGILPSMLSSVSGNGSIASFISSLFFS 107

[Close]
BLAST of CSPI04G14990 vs. ExPASy TrEMBL
Match: A0A5A7TUG4 (Early nodulin-75-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00850 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 57/146 (39.04%), Postives = 72/146 (49.32%), Query Frame = 0 

Query: 1   MNNPYGHYSYGYPYPYPHQGYPKYQGQGVPPNHNYGAGYTNY-QHGHVHPYPCYDY---- 60
           MNNPYG+YS+GYPYP+  + YPKY+   VPP     AGYT+Y ++   +PYP  +Y    
Sbjct: 1   MNNPYGYYSHGYPYPH-KRSYPKYKA-AVPPRR--PAGYTSYHEYEDYYPYPSRNYQGYP 60

Query: 61  ---------------------------SYLYQAYPYPPPSTTLIPPQYNYQQNYDTNIKG 115
                                      S  YQ YP     TT  PP + Y+       K 
Sbjct: 61  KYDAPTTKAPPPHQCSYHEYEDYYPYPSRNYQGYPKYDAPTTKAPPSHQYRPK-----KE 120

[Close]
BLAST of CSPI04G14990 vs. ExPASy TrEMBL
Match: A0A1S3BP00 (early nodulin-75-like OS=Cucumis melo OX=3656 GN=LOC103491729 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 57/146 (39.04%), Postives = 72/146 (49.32%), Query Frame = 0 

Query: 1   MNNPYGHYSYGYPYPYPHQGYPKYQGQGVPPNHNYGAGYTNY-QHGHVHPYPCYDY---- 60
           MNNPYG+YS+GYPYP+  + YPKY+   VPP     AGYT+Y ++   +PYP  +Y    
Sbjct: 1   MNNPYGYYSHGYPYPH-KRSYPKYKA-AVPPRR--PAGYTSYHEYEDYYPYPSRNYQGYP 60

Query: 61  ---------------------------SYLYQAYPYPPPSTTLIPPQYNYQQNYDTNIKG 115
                                      S  YQ YP     TT  PP + Y+       K 
Sbjct: 61  KYDAPTTKAPPPHQCSYHEYEDYYPYPSRNYQGYPKYDAPTTKAPPSHQYRPK-----KE 120

[Close]
BLAST of CSPI04G14990 vs. NCBI nr
Match: KAE8649545.1 (hypothetical protein Csa_017919 [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 7.2e-53
Identity = 105/108 (97.22%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MNNPYGHYSYGYPYPYPHQGYPKYQGQGVPPNHNYGAGYTNYQHGHVHPYPCYDYSYLYQ 60
           MNNPYGHYSYG  YPYPHQGYPKYQGQGVPPNHNYGAGYTNYQHGHVHPY CYDYSYLYQ
Sbjct: 1   MNNPYGHYSYG--YPYPHQGYPKYQGQGVPPNHNYGAGYTNYQHGHVHPYSCYDYSYLYQ 60

Query: 61  AYPYPPPSTTLIPPQYNYQQNYDTNIKGGILASMLSSVSGNGSIASFV 109
           AYPYPPPSTTLIPPQYNYQQNYDTNIKGGILASMLSSVSGNGSIASFV
Sbjct: 61  AYPYPPPSTTLIPPQYNYQQNYDTNIKGGILASMLSSVSGNGSIASFV 106

[Close]
BLAST of CSPI04G14990 vs. NCBI nr
Match: KAA0045171.1 (early nodulin-75-like [Cucumis melo var. makuwa] >TYK23567.1 early nodulin-75-like [Cucumis melo var. makuwa])

HSP 1 Score: 189.1 bits (479), Expect = 2.1e-44
Identity = 96/114 (84.21%), Postives = 99/114 (86.84%), Query Frame = 0 

Query: 1   MNNPYGHYSYGYPYPYPHQGYPKYQGQGVPPNHNYGAGYTNYQHGHVHPYPCYDYSYLYQ 60
           MNNPYG YSYG  YPYPHQGYPKYQGQGVPPN+ YGAGY NY HGHVHPYPCYDYS    
Sbjct: 1   MNNPYGCYSYG--YPYPHQGYPKYQGQGVPPNYKYGAGYINYGHGHVHPYPCYDYS---- 60

Query: 61  AYPYPPPSTTLIPPQYNYQQNYDTNIKGGILASMLSSVSGNGSIASFVSSLFFN 115
            YPYPPPSTTLIPPQYNYQQNY TNI  GIL SMLSSVSGNGSIASF+SSLFF+
Sbjct: 61  -YPYPPPSTTLIPPQYNYQQNYGTNITEGILPSMLSSVSGNGSIASFISSLFFS 107

[Close]
BLAST of CSPI04G14990 vs. NCBI nr
Match: XP_008450016.1 (PREDICTED: early nodulin-75-like [Cucumis melo] >KAA0045161.1 early nodulin-75-like [Cucumis melo var. makuwa] >TYK23577.1 early nodulin-75-like [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 2.3e-06
Identity = 57/146 (39.04%), Postives = 72/146 (49.32%), Query Frame = 0 

Query: 1   MNNPYGHYSYGYPYPYPHQGYPKYQGQGVPPNHNYGAGYTNY-QHGHVHPYPCYDY---- 60
           MNNPYG+YS+GYPYP+  + YPKY+   VPP     AGYT+Y ++   +PYP  +Y    
Sbjct: 1   MNNPYGYYSHGYPYPH-KRSYPKYKA-AVPPRR--PAGYTSYHEYEDYYPYPSRNYQGYP 60

Query: 61  ---------------------------SYLYQAYPYPPPSTTLIPPQYNYQQNYDTNIKG 115
                                      S  YQ YP     TT  PP + Y+       K 
Sbjct: 61  KYDAPTTKAPPPHQCSYHEYEDYYPYPSRNYQGYPKYDAPTTKAPPSHQYRPK-----KE 120

The following BLAST results are available for this feature:
BLAST of CSPI04G14990 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI04G14990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZN92.0e-5697.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296860 PE=4 SV=1[more]
A0A5A7TUH51.0e-4484.21Early nodulin-75-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50... [more]
A0A5A7TUG41.1e-0639.04Early nodulin-75-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50... [more]
A0A1S3BP001.1e-0639.04early nodulin-75-like OS=Cucumis melo OX=3656 GN=LOC103491729 PE=4 SV=1[more]
BLAST of CSPI04G14990 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649545.17.2e-5397.22hypothetical protein Csa_017919 [Cucumis sativus][more]
KAA0045171.12.1e-4484.21early nodulin-75-like [Cucumis melo var. makuwa] >TYK23567.1 early nodulin-75-li... [more]
XP_008450016.12.3e-0639.04PREDICTED: early nodulin-75-like [Cucumis melo] >KAA0045161.1 early nodulin-75-l... [more]
BLAST of CSPI04G14990 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G14990.1CSPI04G14990.1mRNA