CSPI04G14730 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI04G14730
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUPF0161 protein At3g09310
LocationChr4: 12359650 .. 12361771 (-)
RNA-Seq ExpressionCSPI04G14730
SyntenyCSPI04G14730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCTTTTTCTTTAAAAAAATACAAACTTCATTGGCGTTGGCAGTAACTGTTAGAGCAGATTGACATGGCGGTTCTTCCCACCACAAACTGCCACACATCCCAAAACCTGAACCCAATCTTCTTCGCCGGCCGCTGCCATCAACGGCCCTGCTCTGCCGCCGGCTTCAGTATTCGATTTAATTGCCGGAAGCTCCGTCGCTCGTTAATCCTAAGCGAAACGCGCGCCACATCGAACTCAAGCGCGAACAGCGACCAAGGTACTTGCCTCTTCTTCACTCAATATTTTTCTGTACTCAATGTATAGATTTCGGTGAATTAGGGCATTTTAATCGTTTGCACAGATGGCGAAGTGGACAATTTGGGGGTTAAAGCTGCACTATCCATGCTTAAATTCTACAAACGTAAGTAGAATAGTGATGTTTATTCTGTTTTAAGATTCTAATTCGAAGAGTTTCAGAATTCGAACCGATTGAAGATAACACGTGCCTTTGAGTTCTTACTTCAATAATTGTGAGCAGGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCCACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATACGGTGTTGCCAAGGGTACTATCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTAATGATCTCATTCAAAGGGAACGAACGAGATGAGTGAGAATCATCTTCTTGAACCTTCAGGAAGGGGATTTGTCCGTGTTTATGTTATTTGGTTTTTAATTCTGTAAAGTACTGATTTTAGGCCATTGCTGCCTTGTAGGTGGATCTGGGTTTGATCCTCCTCGGTGGTTTGATGAAGAAAGATTGCCAGAACCAGAAGATTGACAATTTCAAATGCTGCATATAATTTGTTAGTATGTGATACGGACCAAGAGTTCACTGTGATGAGTTTTTCAGTTTTCTTTCCTGATATTGCATTCTTGGAAGAAGGGTTGTGTAAAGTTGCTGAATTCACGAGTCATTTGGTTTTGAAAAGGTTAAAATAATTTTTGTCATGTTTGTTTTGAAATTGTTAAAATCACTTTTGTCATGTTTTTAATTATTTAAACGGGTCTGATGGATGAGTTTACACTTTTCTAACACGTTTTCCTTTGAACAGAAATGTTTTTGAATGATTAAGAGCAATTTAAAACATTTTTGTAATGATTTCTAACCCTTTCAAAATTAGTTCTGCTTGTGGGAAGCTAGTCCAATTGTTCTTTGACAAACTTAAAACTATGTATTATATACTAACTTATCATTCAGATGCAAAAAGGTTATGATTGGTAATCCTTCCATAACCAATTTGATTGATGGAATCTTGAAGGACATTTTGTATTATTACTGATATCAAATGTTCCATATGATGATGACGACTTCCTTGGTGATTATATGAAAGGAAGATATCTTCCCATGCCTTGGTGCTTTTTTGTTGGGCTGTTACACCGCCAGTAGACTTGGTGAGATCAAATAGCTCAAGTTATTTAGGGCCAACTTAAATTAACTTTCTAGGAAAAAGTTCATAAAGTTCTTGAAAAATCAGTCCAAATAATCCCTTTTCGTTTATGATTTTAATATATTTCTAATACCTTCACTCACACGTAGATATTAGAATTATAGACATCGACACATAAAATTGAAGCGATGCCTAATCACTCTTAGATTAAATGTTTGAGATATTGGGGGATGAATCCATATTTTCTTTCCTCATAATTTCTGCCATTTTGAGAAGGAGTTTTGTGTTATGTAATTTATGTTTGTTTAGTTTAGTTCTTTTGCTGGGGTTTGAAGGTTCTTTCAATCTCATCACCCAGATTTCTTTGCAGGTTGTGTTGGTTGATTGTTGGGATGAATTTGTGAGAGCTAATTCTCTGTGCAGAGCGAAGAATGTTGTAGAAAATAGCATGTTACACCAATATTTTTGTAACTGGAGTTGTGAATGTGGAACTTGTTCTGAGAAAGTAACATAATATTATGTTAGATTACAATTGTGATATGCTGACTTTAGCTTATACTGATCATATTAAATGTACAATATCTGTTTTCTTTTT

mRNA sequence

CTCCTTTTTCTTTAAAAAAATACAAACTTCATTGGCGTTGGCAGTAACTGTTAGAGCAGATTGACATGGCGGTTCTTCCCACCACAAACTGCCACACATCCCAAAACCTGAACCCAATCTTCTTCGCCGGCCGCTGCCATCAACGGCCCTGCTCTGCCGCCGGCTTCAGTATTCGATTTAATTGCCGGAAGCTCCGTCGCTCGTTAATCCTAAGCGAAACGCGCGCCACATCGAACTCAAGCGCGAACAGCGACCAAGATGGCGAAGTGGACAATTTGGGGGTTAAAGCTGCACTATCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCCACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATACGGTGTTGCCAAGGGTACTATCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTGGATCTGGGTTTGATCCTCCTCGGTGGTTTGATGAAGAAAGATTGCCAGAACCAGAAGATTGACAATTTCAAATGCTGCATATAATTTATATCTTCCCATGCCTTGGTGCTTTTTTGTTGGGCTGTTACACCGCCAGTAGACTTGGTTGTGTTGGTTGATTGTTGGGATGAATTTGTGAGAGCTAATTCTCTGTGCAGAGCGAAGAATGTTGTAGAAAATAGCATGTTACACCAATATTTTTGTAACTGGAGTTGTGAATGTGGAACTTGTTCTGAGAAAGTAACATAATATTATGTTAGATTACAATTGTGATATGCTGACTTTAGCTTATACTGATCATATTAAATGTACAATATCTGTTTTCTTTTT

Coding sequence (CDS)

ATGGCGGTTCTTCCCACCACAAACTGCCACACATCCCAAAACCTGAACCCAATCTTCTTCGCCGGCCGCTGCCATCAACGGCCCTGCTCTGCCGCCGGCTTCAGTATTCGATTTAATTGCCGGAAGCTCCGTCGCTCGTTAATCCTAAGCGAAACGCGCGCCACATCGAACTCAAGCGCGAACAGCGACCAAGATGGCGAAGTGGACAATTTGGGGGTTAAAGCTGCACTATCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCCACATGTAGTGAGTATTCGATGCAAGCTTACAAGAAATACGGTGTTGCCAAGGGTACTATCTTGACTGCTTGGCGTCTCTGTCGCTGCAATCCCCTTGGTGGATCTGGGTTTGATCCTCCTCGGTGGTTTGATGAAGAAAGATTGCCAGAACCAGAAGATTGA

Protein sequence

MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSANSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED*
Homology
[Close]
BLAST of CSPI04G14730 vs. ExPASy Swiss-Prot
Match: Q9SR32 (UPF0161 protein At3g09310 OS=Arabidopsis thaliana OX=3702 GN=At3g09310 PE=2 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 5.9e-37
Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 0 

Query: 49  LSETRATSNSSANSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQ 108
           LS     S     S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+
Sbjct: 50  LSAKSTPSKPDPASPQDGEELESVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSME 109

Query: 109 AYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDE 145
           AYKKYGV KGT+LT WRLCRCNPLGGSGFDPPRWF E
Sbjct: 110 AYKKYGVLKGTVLTTWRLCRCNPLGGSGFDPPRWFGE 146

[Close]
BLAST of CSPI04G14730 vs. ExPASy Swiss-Prot
Match: Q2S3T2 (Putative membrane protein insertion efficiency factor OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=SRU_1017 PE=3 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-18
Identity = 36/69 (52.17%), Postives = 52/69 (75.36%), Query Frame = 0 

Query: 77  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGF 136
           + +++ Y+  +SP L  +CR+ PTCS Y++QA+++YG  KG +LT  RL RC+P GG G+
Sbjct: 17  IGLVRLYQLVLSPHLGRTCRFHPTCSAYAIQAFREYGALKGLVLTVHRLLRCHPWGGHGY 76

Query: 137 DPPRWFDEE 146
           DPPRWFDEE
Sbjct: 77  DPPRWFDEE 85

[Close]
BLAST of CSPI04G14730 vs. ExPASy Swiss-Prot
Match: B0T0Z8 (Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain K31) OX=366602 GN=Caul_4526 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.8e-17
Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 0 

Query: 80  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPP 139
           LK YK  +SP +   CRYLPTCSEY+ QA K +G  KG+ L   R+CRCNPLGGSG+DPP
Sbjct: 12  LKAYKTTLSPFIGRQCRYLPTCSEYAAQALKDHGPLKGSWLAVGRICRCNPLGGSGYDPP 71

[Close]
BLAST of CSPI04G14730 vs. ExPASy Swiss-Prot
Match: Q11SD8 (Putative membrane protein insertion efficiency factor OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=CHU_2420 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.4e-16
Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 0 

Query: 80  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP 139
           +K Y+  ISPLLP +CRY PTCSEY +QA +KYG  KG  L   R+C CNP GGSG+DP
Sbjct: 19  VKIYQYSISPLLPGACRYTPTCSEYCVQAIEKYGPLKGIWLGTKRICSCNPWGGSGYDP 77

[Close]
BLAST of CSPI04G14730 vs. ExPASy Swiss-Prot
Match: B0K8I2 (Putative membrane protein insertion efficiency factor OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=Teth39_2293 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.4e-16
Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 79  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP 138
           ++K Y+R ISP+ P SCR+ PTCS+YS++A  KYG+ KG I++ WR+ RCNP    G+DP
Sbjct: 8   LIKLYQRYISPMKPRSCRFYPTCSQYSIEAISKYGLLKGGIMSIWRILRCNPFNPGGYDP 67

[Close]
BLAST of CSPI04G14730 vs. ExPASy TrEMBL
Match: A0A0A0KXI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296120 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.7e-84
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60
           MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA
Sbjct: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of CSPI04G14730 vs. ExPASy TrEMBL
Match: A0A1S3BJN3 (UPF0161 protein At3g09310 OS=Cucumis melo OX=3656 GN=LOC103490314 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.9e-79
Identity = 144/152 (94.74%), Postives = 146/152 (96.05%), Query Frame = 0 

Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60
           MAVLPTTNC+T QNLNPIFF GRCHQRP  AAGFSIRFNCRKLRR LILSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of CSPI04G14730 vs. ExPASy TrEMBL
Match: A0A5A7STY4 (UPF0161 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00430 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.7e-77
Identity = 144/158 (91.14%), Postives = 146/158 (92.41%), Query Frame = 0 

Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60
           MAVLPTTNC+T QNLNPIFF GRCHQRP  AAGFSIRFNCRKLRR LILSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPL------GGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPL      GGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGHCCLVGGSGFDPPRWFDEERLPEPED 158

[Close]
BLAST of CSPI04G14730 vs. ExPASy TrEMBL
Match: A0A6J1EUS1 (UPF0161 protein At3g09310 OS=Cucurbita moschata OX=3662 GN=LOC111438132 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73
Identity = 137/152 (90.13%), Postives = 140/152 (92.11%), Query Frame = 0 

Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60
           MAVLPTTNCH  QN NPIFFAG C +   SAA FSIRFN +KLRR LI+SETRATSNSSA
Sbjct: 1   MAVLPTTNCHKLQNQNPIFFAGGCQKSHRSAAAFSIRFNGQKLRRPLIISETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of CSPI04G14730 vs. ExPASy TrEMBL
Match: A0A6J1HNH0 (UPF0161 protein At3g09310 OS=Cucurbita maxima OX=3661 GN=LOC111465896 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 135/152 (88.82%), Postives = 138/152 (90.79%), Query Frame = 0 

Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60
           MAVLPTTNCH  Q   PIFFAG C Q   SAA FSIRFN +KLRR LI+SETRATSNSSA
Sbjct: 1   MAVLPTTNCHKLQ--KPIFFAGGCQQTHRSAAAFSIRFNGQKLRRPLIISETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRY+PTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NEDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYVPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 150

[Close]
BLAST of CSPI04G14730 vs. NCBI nr
Match: XP_004142065.1 (UPF0161 protein At3g09310 isoform X1 [Cucumis sativus] >XP_011653638.1 UPF0161 protein At3g09310 isoform X1 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 3.6e-84
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60
           MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA
Sbjct: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of CSPI04G14730 vs. NCBI nr
Match: XP_008448003.1 (PREDICTED: UPF0161 protein At3g09310 [Cucumis melo] >XP_008448011.1 PREDICTED: UPF0161 protein At3g09310 [Cucumis melo])

HSP 1 Score: 304.3 bits (778), Expect = 6.0e-79
Identity = 144/152 (94.74%), Postives = 146/152 (96.05%), Query Frame = 0 

Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60
           MAVLPTTNC+T QNLNPIFF GRCHQRP  AAGFSIRFNCRKLRR LILSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of CSPI04G14730 vs. NCBI nr
Match: KAA0032659.1 (UPF0161 protein [Cucumis melo var. makuwa] >TYK23539.1 UPF0161 protein [Cucumis melo var. makuwa])

HSP 1 Score: 297.7 bits (761), Expect = 5.6e-77
Identity = 144/158 (91.14%), Postives = 146/158 (92.41%), Query Frame = 0 

Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60
           MAVLPTTNC+T QNLNPIFF GRCHQRP  AAGFSIRFNCRKLRR LILSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPL------GGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPL      GGSGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPLGHCCLVGGSGFDPPRWFDEERLPEPED 158

[Close]
BLAST of CSPI04G14730 vs. NCBI nr
Match: XP_038882937.1 (UPF0161 protein At3g09310 isoform X3 [Benincasa hispida])

HSP 1 Score: 286.2 bits (731), Expect = 1.7e-73
Identity = 137/152 (90.13%), Postives = 141/152 (92.76%), Query Frame = 0 

Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60
           MAVL TTNCH  QN NP FFAGRCHQRP SAA FSI++N R LRR LILS+TRATSNSS+
Sbjct: 1   MAVLSTTNCHKLQNQNPSFFAGRCHQRPFSAADFSIQYNRRNLRRPLILSKTRATSNSSS 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNPLGGSGFDPPRWFDEE LPEPED
Sbjct: 121 TAWRLCRCNPLGGSGFDPPRWFDEESLPEPED 152

[Close]
BLAST of CSPI04G14730 vs. NCBI nr
Match: XP_023518310.1 (UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 4.9e-73
Identity = 137/152 (90.13%), Postives = 140/152 (92.11%), Query Frame = 0 

Query: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60
           MAVLPTTNCH  QN NPIFFAGRCHQ   SAA FSIRFN +KLRR LI+SE+RATSNSSA
Sbjct: 1   MAVLPTTNCHKLQNQNPIFFAGRCHQSRRSAAAFSIRFNGQKLRRPLIISESRATSNSSA 60

Query: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           N DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NRDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLGGSGFDPPRWFDEERLPEPED 153
           TAWRLCRCNP G SGFDPPRWFDEERLPEPED
Sbjct: 121 TAWRLCRCNPFGVSGFDPPRWFDEERLPEPED 152

[Close]
BLAST of CSPI04G14730 vs. TAIR 10
Match: AT3G09310.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast hits to 5781 proteins in 1903 species: Archae - 0; Bacteria - 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3; Other Eukaryotes - 1778 (source: NCBI BLink). )

HSP 1 Score: 155.2 bits (391), Expect = 4.2e-38
Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 0 

Query: 49  LSETRATSNSSANSDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQ 108
           LS     S     S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+
Sbjct: 50  LSAKSTPSKPDPASPQDGEELESVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSME 109

Query: 109 AYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDE 145
           AYKKYGV KGT+LT WRLCRCNPLGGSGFDPPRWF E
Sbjct: 110 AYKKYGVLKGTVLTTWRLCRCNPLGGSGFDPPRWFGE 146

The following BLAST results are available for this feature:
BLAST of CSPI04G14730 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SR325.9e-3773.20UPF0161 protein At3g09310 OS=Arabidopsis thaliana OX=3702 GN=At3g09310 PE=2 SV=2[more]
Q2S3T22.7e-1852.17Putative membrane protein insertion efficiency factor OS=Salinibacter ruber (str... [more]
B0T0Z88.8e-1761.67Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain... [more]
Q11SD87.4e-1661.02Putative membrane protein insertion efficiency factor OS=Cytophaga hutchinsonii ... [more]
B0K8I27.4e-1653.33Putative membrane protein insertion efficiency factor OS=Thermoanaerobacter pseu... [more]
BLAST of CSPI04G14730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXI41.7e-84100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296120 PE=3 SV=1[more]
A0A1S3BJN32.9e-7994.74UPF0161 protein At3g09310 OS=Cucumis melo OX=3656 GN=LOC103490314 PE=3 SV=1[more]
A0A5A7STY42.7e-7791.14UPF0161 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G0043... [more]
A0A6J1EUS13.1e-7390.13UPF0161 protein At3g09310 OS=Cucurbita moschata OX=3662 GN=LOC111438132 PE=3 SV=... [more]
A0A6J1HNH01.1e-7088.82UPF0161 protein At3g09310 OS=Cucurbita maxima OX=3661 GN=LOC111465896 PE=3 SV=1[more]
BLAST of CSPI04G14730 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142065.13.6e-84100.00UPF0161 protein At3g09310 isoform X1 [Cucumis sativus] >XP_011653638.1 UPF0161 p... [more]
XP_008448003.16.0e-7994.74PREDICTED: UPF0161 protein At3g09310 [Cucumis melo] >XP_008448011.1 PREDICTED: U... [more]
KAA0032659.15.6e-7791.14UPF0161 protein [Cucumis melo var. makuwa] >TYK23539.1 UPF0161 protein [Cucumis ... [more]
XP_038882937.11.7e-7390.13UPF0161 protein At3g09310 isoform X3 [Benincasa hispida][more]
XP_023518310.14.9e-7390.13UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo][more]
BLAST of CSPI04G14730 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G09310.14.2e-3873.20unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002696Putative membrane protein insertion efficiency factorSMARTSM01234Haemolytic_2coord: 72..139
e-value: 6.1E-35
score: 132.1
IPR002696Putative membrane protein insertion efficiency factorTIGRFAMTIGR00278TIGR00278coord: 78..139
e-value: 4.7E-21
score: 72.4
IPR002696Putative membrane protein insertion efficiency factorPFAMPF01809YidDcoord: 75..138
e-value: 8.9E-26
score: 89.6
IPR002696Putative membrane protein insertion efficiency factorPANTHERPTHR33383MEMBRANE PROTEIN INSERTION EFFICIENCY FACTOR-RELATEDcoord: 23..148
IPR002696Putative membrane protein insertion efficiency factorHAMAPMF_00386UPF0161_YidDcoord: 72..140
score: 20.718416

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G14730.3CSPI04G14730.3mRNA
CSPI04G14730.1CSPI04G14730.1mRNA
CSPI04G14730.2CSPI04G14730.2mRNA