CSPI04G14260 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G14260
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pectate lyase
Location	Chr4: 12034491 .. 12037991 (+)
RNA-Seq Expression	CSPI04G14260
Synteny	CSPI04G14260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAATATCAAATCTATGCAAATGGTATAGAGAAAAAAAAAGATTAAATCTTGATACCTTGATCCCAACGCAAGGTAGAAGACAATGGCCGGTGAAAGAAATCCCTTCACCGTAACTCACGATCGCCTTTCACCTTAACTAATTTTTACAGGGAAACCTTCGATCCATAGCTGTCAATTCCTTGTTTCGATTTCTCCAATCCAATCTAATCCAATCCAATCGCCTTCTGTTATAATGGGTAACGCCCATGGCCACCGCAAGCATTTCAACCATGGCGTAAATACCTCTCCAACCACTAACGCTCCTTCTCCCTCCAATAAATACTCTTCATCTGAACCCACTTCTCGAAATCCCTCCTCCTCCACGAATATGCAGTCCTTGCCCTACCCCCATGTTGATTCCAGCCTTCGAGCCCTTGCCGCTCAGGCTGAGGGCTTTGGTCGCTCTGCCATTGGTGGTCTCCATGGTTCTGTTTATTGTGTTACTAATTTAGCAGGTATTATTTGCTTTCTCTTGTTTATGTACAAAATTCATTTTGGTGGTTTCTGGATTATGCTCTGTTGGGTCCTTTTTTTATGAAGTTGTGGAAATTGAGATGTTGAAGATTTGGGAAATGTGTTTTCTTGACTTGATTTAGAATTATCATGATTTTTCTACTTTGGAGGCTGGTTGATGGTAGAGTTCTTCTGTTATAAATCATCCCGTTTCTGTGCATTTCATTTGATTGTTTGAAGTTGGTATTAGAATTCGATTAGTTGCTGAGATGTAGGAACTTAGGAGAGACTTTGTTACAAATGGTACTTGGTACATGAATGATCTTAGAACTCTCTCTTGTTTTGCTCTGTTTTTGTTTCATTTCCCTTTTTTTCGTATGCTTTGTTTGGTGGGTGAGGGGGAGGAACTGAAGTTTTGTTGAGGAATTTTGTAATCACAAAGGCTAGAGAGTTAGATTTAGAATTCTGTTCTTTGTGCTTTATTGGTTTGTATTTTAAGAGTTTTACAATTGCTTCCTAATTCTCCATACACTTTGTATCATATAATTGTGTTGGTTCTTCGTTGAGGAATCCTTCAATCTGTATTTTCTGTCTCTTGTAGATGATGGTCCGGGATCACTTAGGTTCGGATGTCGTATGAAAGAGCCTCTTTGGATTATCTTTGAAGTTTCGGGCACAATTGACTTGTCTTCGTATTTGAGTGTGTCATCGTATAAGACTGTAGATGGTCGTGGTCAAAGGATAAAACTTACAGGAAAGGGGTTGAGGCTGAAGGAATGTGAGCATGTGATTATTTGTAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTTGATGGAATTCAAATTAAGCCGAACTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGACTATGATGATGGGTTGATTGATATCACCCGAGCAAGCACGGATATCACTATTTCTAGGTGAGAGAAAGCTACATCTAAGAGCTTTCTTGATACCTTAACAATCCAGCATTGTGCTTGATTTCTTTGCCCATTGTGTATCTGTAGGTGTTACTTCTCACATCATGACAAGACAATGCTCATTGGAGCAGATCCTTCTCACATTGGTGACCGATGTATCCGTGTCACTATCCACCATTGTTTTTTTGATGGTACACGTCAACGGCATCCACGTGTTAGATATGCTCAAGTGCATCTATACAATAATTACACCAGAAACTGGGGTATCTATGCTGTCTGTGCTAGTGTAGAATCAAAGGTCTTGTTACACCTCACTTTTTCCCAAATACATTTTAGTTTAAACTTCTCCAAGATAGGTGATTTAGTTTCTTGCTTTCATTTTGTATCAGATATACTCTCAGTGCAACATATACGAAGCAGGAGAGAAAAAGGTGGCGTTTAAATATCTAACTGAAAAGGTAAATTTATTCTTTTTCGTCCTTATGATTCGAGTAGACGTGTAGATTATGTCTATGGTTAAATCAACACGTGATAAGATTAGGGGTAAAGTATCTCACAATGTATGCAGCTTTGACTTTTTATGCTTTGCTTCTAAAGTGTTATTCCTTCTTATCCCTGATGAATTCTACCCACGTTTGTGTACCATTTTCTGTAATTTCACTCTATACATTCTTAAACATTGATGTAACCCATAACATGTTAGTATTTATAATTCATGTTCCATAGGACTGGACAAAGTTTTTACAATGATTCGGGTTTTGATTTTATAACTCATGACATGACACAGTGACATGTCGTTTTTAAAAGTTTTTGAAATGACATGACAAGGATACATTTATTGAAATATACATTTTTAACAATATATATATCATCTTTATATCGGAAGAAAATTGAAAGTAAATGGGTTGATGTACTTGTCTGCTTGAAAAATTAGTTTGATGTATTTCACCCTCAAAATTAATTACTATTGTCATATGCGTGTTCTTTTAGTATTCTTAACGATTGTTCCATGCATATATAACACATTTGTGGCCTTAACAAGTGTCTGATACATGTACATACAAGTATCGGTGTGTCCAAGTGTCCAACATGATTCAAATATGGACACGCTAGTCAAACAAAAGGTCACAATACATCTTAAAAATTGGGGGTTCATTTGCCTGTCCATGCATCTCTCTCACTCTCTGTTTGTGCCACATGTCTAAAGATGTTTAGTTACTTTGAAACTGCTTGAGACTCGAAAACAAAATGCCAAGAACCTTTGTAGAACAAAACAAACTTTACTAGTTAAAATATATATATATATATTTATGTATGTGAAAAGGAACAAAACAAAGTGTAGTGAAATGGAACCATGGTTCGTATATTTATATCTTACTCTGATATCATGAGTTCAGGCAACAGACAAGGAAAAGCCGTCAAGTGGTTCCATATGGTCTGATGGAGACTTATTTGTAAAGGACACTCAAAGTGGGCTATTGGCTCCAACTGCTGAACACGACTTGTTTCATCCTTCACACCATTACTCTAATTGGACAGTGCAACCTGCAACAGATGCTCTTAAACATATTCTCCAACATTGTACTGGATGTCAAAACATCCCAAGACCCGCTGATCAGCCTCTGGTACCTTAGAAGATAATACAACTTGTTGAAATTGTAGTTTTGGTCCTTGAACTTCTATCCTTTTTTCATTTTTGGTCCTTGAACTAAAGTCTTACTTTGGCTCCTTCAACTTTGAACATCTCAACTTGGGTCCTTTTTAACTTCTTTGTCAAATCCACTTTTATGGCCCCCATGTAAAGATGTTGTGTTTTGTATTATTATTTGTATGTTGTATCCATGTTGTTGGTTTAGAAATTTCCGTCAAAGTTCGAGGGCTAAAGTTGAAATTATATATTTACTTTTTAACTTTTCATGTTATAACTATCCAGTAGTGAGACATTACTTGTAGTATTCAAACTCTATTGTAACTTGTAAGGCTATTAATTATGTACCACCATTGTCACTAGTAAGTTGATCACTCGATTTGTTGAGGAGTAAAAGTTAGTCAGTC

mRNA sequence

TCAATATCAAATCTATGCAAATGGTATAGAGAAAAAAAAAGATTAAATCTTGATACCTTGATCCCAACGCAAGGTAGAAGACAATGGCCGGTGAAAGAAATCCCTTCACCGTAACTCACGATCGCCTTTCACCTTAACTAATTTTTACAGGGAAACCTTCGATCCATAGCTGTCAATTCCTTGTTTCGATTTCTCCAATCCAATCTAATCCAATCCAATCGCCTTCTGTTATAATGGGTAACGCCCATGGCCACCGCAAGCATTTCAACCATGGCGTAAATACCTCTCCAACCACTAACGCTCCTTCTCCCTCCAATAAATACTCTTCATCTGAACCCACTTCTCGAAATCCCTCCTCCTCCACGAATATGCAGTCCTTGCCCTACCCCCATGTTGATTCCAGCCTTCGAGCCCTTGCCGCTCAGGCTGAGGGCTTTGGTCGCTCTGCCATTGGTGGTCTCCATGGTTCTGTTTATTGTGTTACTAATTTAGCAGATGATGGTCCGGGATCACTTAGGTTCGGATGTCGTATGAAAGAGCCTCTTTGGATTATCTTTGAAGTTTCGGGCACAATTGACTTGTCTTCGTATTTGAGTGTGTCATCGTATAAGACTGTAGATGGTCGTGGTCAAAGGATAAAACTTACAGGAAAGGGGTTGAGGCTGAAGGAATGTGAGCATGTGATTATTTGTAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTTGATGGAATTCAAATTAAGCCGAACTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGACTATGATGATGGGTTGATTGATATCACCCGAGCAAGCACGGATATCACTATTTCTAGGTGTTACTTCTCACATCATGACAAGACAATGCTCATTGGAGCAGATCCTTCTCACATTGGTGACCGATGTATCCGTGTCACTATCCACCATTGTTTTTTTGATGGTACACGTCAACGGCATCCACGTGTTAGATATGCTCAAGTGCATCTATACAATAATTACACCAGAAACTGGGGTATCTATGCTGTCTGTGCTAGTGTAGAATCAAAGATATACTCTCAGTGCAACATATACGAAGCAGGAGAGAAAAAGGTGGCGTTTAAATATCTAACTGAAAAGGCAACAGACAAGGAAAAGCCGTCAAGTGGTTCCATATGGTCTGATGGAGACTTATTTGTAAAGGACACTCAAAGTGGGCTATTGGCTCCAACTGCTGAACACGACTTGTTTCATCCTTCACACCATTACTCTAATTGGACAGTGCAACCTGCAACAGATGCTCTTAAACATATTCTCCAACATTGTACTGGATGTCAAAACATCCCAAGACCCGCTGATCAGCCTCTGGTACCTTAGAAGATAATACAACTTGTTGAAATTGTAGTTTTGGTCCTTGAACTTCTATCCTTTTTTCATTTTTGGTCCTTGAACTAAAGTCTTACTTTGGCTCCTTCAACTTTGAACATCTCAACTTGGGTCCTTTTTAACTTCTTTGTCAAATCCACTTTTATGGCCCCCATGTAAAGATGTTGTGTTTTGTATTATTATTTGTATGTTGTATCCATGTTGTTGGTTTAGAAATTTCCGTCAAAGTTCGAGGGCTAAAGTTGAAATTATATATTTACTTTTTAACTTTTCATGTTATAACTATCCAGTAGTGAGACATTACTTGTAGTATTCAAACTCTATTGTAACTTGTAAGGCTATTAATTATGTACCACCATTGTCACTAGTAAGTTGATCACTCGATTTGTTGAGGAGTAAAAGTTAGTCAGTC

Coding sequence (CDS)

ATGGGTAACGCCCATGGCCACCGCAAGCATTTCAACCATGGCGTAAATACCTCTCCAACCACTAACGCTCCTTCTCCCTCCAATAAATACTCTTCATCTGAACCCACTTCTCGAAATCCCTCCTCCTCCACGAATATGCAGTCCTTGCCCTACCCCCATGTTGATTCCAGCCTTCGAGCCCTTGCCGCTCAGGCTGAGGGCTTTGGTCGCTCTGCCATTGGTGGTCTCCATGGTTCTGTTTATTGTGTTACTAATTTAGCAGATGATGGTCCGGGATCACTTAGGTTCGGATGTCGTATGAAAGAGCCTCTTTGGATTATCTTTGAAGTTTCGGGCACAATTGACTTGTCTTCGTATTTGAGTGTGTCATCGTATAAGACTGTAGATGGTCGTGGTCAAAGGATAAAACTTACAGGAAAGGGGTTGAGGCTGAAGGAATGTGAGCATGTGATTATTTGTAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTTGATGGAATTCAAATTAAGCCGAACTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGACTATGATGATGGGTTGATTGATATCACCCGAGCAAGCACGGATATCACTATTTCTAGGTGTTACTTCTCACATCATGACAAGACAATGCTCATTGGAGCAGATCCTTCTCACATTGGTGACCGATGTATCCGTGTCACTATCCACCATTGTTTTTTTGATGGTACACGTCAACGGCATCCACGTGTTAGATATGCTCAAGTGCATCTATACAATAATTACACCAGAAACTGGGGTATCTATGCTGTCTGTGCTAGTGTAGAATCAAAGATATACTCTCAGTGCAACATATACGAAGCAGGAGAGAAAAAGGTGGCGTTTAAATATCTAACTGAAAAGGCAACAGACAAGGAAAAGCCGTCAAGTGGTTCCATATGGTCTGATGGAGACTTATTTGTAAAGGACACTCAAAGTGGGCTATTGGCTCCAACTGCTGAACACGACTTGTTTCATCCTTCACACCATTACTCTAATTGGACAGTGCAACCTGCAACAGATGCTCTTAAACATATTCTCCAACATTGTACTGGATGTCAAAACATCCCAAGACCCGCTGATCAGCCTCTGGTACCTTAG

Protein sequence

MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYLSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKATDKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKHILQHCTGCQNIPRPADQPLVP*

Homology

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BLAST of CSPI04G14260 vs. ExPASy Swiss-Prot
Match: Q9C8G4 (Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-46
Identity = 108/262 (41.22%), Postives = 153/262 (58.40%), Query Frame = 0


Query: 38  RNPSSSTNMQSLPYPHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADD----GPGS 97
           RNP  +TN Q            ALA  A G+G++AIGG +G +Y VTN +D+     PG+
Sbjct: 44  RNPKWATNRQ------------ALAHCAVGYGKAAIGGKNGPIYVVTNPSDNPTRPSPGT 103

Query: 98  LRFGCRMKEPLWIIFEVSGTIDLSSYLSVSSYKTVDGRGQRIKL-TGKGLRLKECEHVII 157
           LR+     +PLWI F     I L S L ++SYKT+DGRG ++++  G  LR+++ +HVII
Sbjct: 104 LRYAVSQPKPLWITFARDMVIVLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVII 163

Query: 158 CNLEFEGGR----GHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRASTDITISRCYF 217
             +     +    G D DGI++   S H+WID C L    DGLID+  +ST +TIS  YF
Sbjct: 164 HGISIHDCKADPNGMDGDGIRVF-QSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYF 223

Query: 218 SHHDKTMLIGADPSHIGDRCIRVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYA 277
           + HDK ML+G D S++GD+ +RVTI  + F  G  +R PRVR    H+ NN    W +YA
Sbjct: 224 TQHDKVMLLGHDDSYMGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYA 283

Query: 278 VCASVESKIYSQCNIYEAGEKK 290
           +  S    I+S+ N + A EK+
Sbjct: 284 IGGSANPIIFSEGNYFVAPEKR 292

[Close]

BLAST of CSPI04G14260 vs. ExPASy Swiss-Prot
Match: Q9FM66 (Putative pectate lyase 21 OS=Arabidopsis thaliana OX=3702 GN=At5g55720 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.5e-44
Identity = 117/316 (37.03%), Postives = 161/316 (50.95%), Query Frame = 0


Query: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDG-----PGSLRFGCRMKEPLWIIFEVSGTID 120
           LA  A GFGR +IGG  G  Y VT+  DD      PG+LR+     +PLWIIF+    I 
Sbjct: 68  LADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQ 127

Query: 121 LSSYLSVSSYKTVDGRGQRIKLT-GKGLRLKECEHVIICNLEFEG------------GRG 180
           L   L V+SYKT+DGRG  +++  G  L L +  ++II NL                G  
Sbjct: 128 LKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVPVKRNALSSLGGY 187

Query: 181 HDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPS 240
            D DGI I   S+ IWID C+L    DGLID    STDITIS  Y  +H++ ML+G    
Sbjct: 188 SDGDGISIF-ESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHSDE 247

Query: 241 HIGDRCIRVTIHHCFF-DGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCN 300
           + GDR +RVTI   +F +G  QR PR R+   H+ NN  R+W +YA+  S    I+SQ N
Sbjct: 248 YSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSANPTIFSQGN 307

Query: 301 IYEAGEKKVAFKYLTEKATDKEKPSSGSIW------SDGDLFVKDTQSGLLAPTAEHDLF 351
           ++ A   +      T++ T +E       W      S+GD  V         P+ + D  
Sbjct: 308 VFIASNNQ-----FTKEVTKRESADGDEEWKEWNWKSEGDEMV---NGAFFTPSGKED-- 367

[Close]

BLAST of CSPI04G14260 vs. ExPASy Swiss-Prot
Match: O65388 (Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 3.5e-43
Identity = 103/260 (39.62%), Postives = 147/260 (56.54%), Query Frame = 0


Query: 52  PHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADD----GPGSLRFGCRMKEPLWII 111
           P+  S+ RALA  A GFG+SA+GG +GS+Y VTN +DD     PG+LR+     +PLWI 
Sbjct: 47  PYWASNRRALADCAVGFGKSAVGGKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKPLWIT 106

Query: 112 FEVSGTIDLSSYLSVSSYKTVDGRGQRIKLT-GKGLRLKECEHVIICNLEF------EGG 171
           F     I L + L ++SYKT+DGRG ++++  G  + ++   HVII  +        + G
Sbjct: 107 FARDMVIVLRNELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSG 166

Query: 172 R------------GHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRASTDITISRCYF 231
           R            G D D I I  +S HIWID C      DGLID+  AST +TIS  YF
Sbjct: 167 RVRSSPTHVGSRKGSDGDAIAIF-DSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYF 226

Query: 232 SHHDKTMLIGADPSHIGDRCIRVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYA 288
           + HDK ML+G + +++ D+ +RVTI  + F  G  +R PRVR    H+ NN    W +YA
Sbjct: 227 TQHDKVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYA 286

[Close]

BLAST of CSPI04G14260 vs. ExPASy Swiss-Prot
Match: Q9LTZ0 (Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.9e-41
Identity = 108/306 (35.29%), Postives = 162/306 (52.94%), Query Frame = 0


Query: 52  PHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADDG-----PGSLRFGCRMKEPLWI 111
           P+ +++ + LA  A GFG++AIGG  G +Y VT+ A+D      PG+LR+    +EPLWI
Sbjct: 74  PNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWI 133

Query: 112 IFEVSGTIDLSSYLSVSSYKTVDGRGQRIKLT-GKGLRLKECEHVIICNLE--------- 171
           IF+    I L   L ++S+KT+DGRG  + +T G  L++    ++II  +          
Sbjct: 134 IFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSG 193

Query: 172 --FEGGRGH-------DVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRASTDITISRCY 231
              + G  H       D D + I    KH+WID CSL + DDGLID    ST ITIS  +
Sbjct: 194 GMIKDGPHHTGWWMQSDGDAVAIF-GGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNH 253

Query: 232 FSHHDKTMLIGADPSHIGDRCIRVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIY 291
            +HHDK ML+G   S+  D+ ++VTI  + F +G  QR PR R+   H+ NN   +W +Y
Sbjct: 254 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 313

Query: 292 AVCASVESKIYSQCNIYEAGEKKVAFKYLTEKATDKEKPSSGSIWSDGDLFVKDT---QS 330
           A+  S    IYSQ N + A   +   +    +   + K    +  S+GD+ +      +S
Sbjct: 314 AIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRES 373

[Close]

BLAST of CSPI04G14260 vs. ExPASy Swiss-Prot
Match: Q93Z04 (Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.9e-41
Identity = 119/319 (37.30%), Postives = 168/319 (52.66%), Query Frame = 0


Query: 17  TSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRALAAQAEGFGRSAIGGL 76
           +SP++++ S S+  SSS  T              +    ++ + LA  + GFG   +GG 
Sbjct: 58  SSPSSSSSSSSSSSSSSCRTGNPIDDCWRCSDADW---STNRQRLADCSIGFGHGTLGGK 117

Query: 77  HGSVYCVTNLADDG-----PGSLRFGCRMKEPLWIIFEVSGTIDLSSYLSVSSYKTVDGR 136
           +G +Y VT+ +D+      PG+LR+G   +EPLWI+F  +  I L   L ++SYKT+DGR
Sbjct: 118 NGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGR 177

Query: 137 GQRIKLTGKG-LRLKECEHVIICNLE---------FEGGRGHDVDGIQIKPNSKHIWIDR 196
           G  + +TG G L L+  +H+II NL          FE     D DGI I   S+ IW+D 
Sbjct: 178 GSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAGFEKRGRSDGDGISIF-GSQKIWVDH 237

Query: 197 CSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTI-HHCFFDG 256
           CS+    DGLID    ST ITIS  YF+HHD+ ML+G D ++  D  ++VTI  + F  G
Sbjct: 238 CSMSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQG 297

Query: 257 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 316
             QR PR R   +H+ NN    W +YA+  S    I SQ N Y A     A K +T K  
Sbjct: 298 LVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSDPSA-KEVT-KRV 357

[Close]

BLAST of CSPI04G14260 vs. ExPASy TrEMBL
Match: A0A0A0KZG2 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_4G293240 PE=3 SV=1)

HSP 1 Score: 787.7 bits (2033), Expect = 2.1e-224
Identity = 375/376 (99.73%), Postives = 376/376 (100.00%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60
           MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA
Sbjct: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60

Query: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120
           LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL
Sbjct: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120

Query: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID
Sbjct: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180

Query: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300

Query: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKHILQHC 360
           DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYS+WTVQPATDALKHILQHC
Sbjct: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSSWTVQPATDALKHILQHC 360

Query: 361 TGCQNIPRPADQPLVP 377
           TGCQNIPRPADQPLVP
Sbjct: 361 TGCQNIPRPADQPLVP 376

[Close]

BLAST of CSPI04G14260 vs. ExPASy TrEMBL
Match: A0A5A7TWJ1 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001550 PE=3 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.2e-216
Identity = 360/376 (95.74%), Postives = 369/376 (98.14%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60
           MGNAHGHRKHFNHGVN SPTTNAP PSNKYSSSEPTSRN SSSTNM+SLPYPHVDSSLRA
Sbjct: 1   MGNAHGHRKHFNHGVNISPTTNAPFPSNKYSSSEPTSRNSSSSTNMESLPYPHVDSSLRA 60

Query: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120
           LAAQAEGFGRSAIGGLHGSVYCVTNL+DDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSY+
Sbjct: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLSDDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYV 120

Query: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID
Sbjct: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180

Query: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSLRDYDDGLIDITR STDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 181 RCSLRDYDDGLIDITRGSTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300

Query: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKHILQHC 360
           DKE+PSSG+IWSDGDLFVK TQSGLLAPTAEH++FHPS HY+NWTV+PATDALKHILQHC
Sbjct: 301 DKEEPSSGTIWSDGDLFVKGTQSGLLAPTAEHNMFHPSEHYTNWTVEPATDALKHILQHC 360

Query: 361 TGCQNIPRPADQPLVP 377
           TGCQNIPRP DQPLVP
Sbjct: 361 TGCQNIPRPTDQPLVP 376

[Close]

BLAST of CSPI04G14260 vs. ExPASy TrEMBL
Match: A0A1S3BGV0 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103489868 PE=3 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.2e-216
Identity = 360/376 (95.74%), Postives = 369/376 (98.14%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60
           MGNAHGHRKHFNHGVN SPTTNAP PSNKYSSSEPTSRN SSSTNM+SLPYPHVDSSLRA
Sbjct: 1   MGNAHGHRKHFNHGVNISPTTNAPFPSNKYSSSEPTSRNSSSSTNMESLPYPHVDSSLRA 60

Query: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120
           LAAQAEGFGRSAIGGLHGSVYCVTNL+DDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSY+
Sbjct: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLSDDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYV 120

Query: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID
Sbjct: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180

Query: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSLRDYDDGLIDITR STDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 181 RCSLRDYDDGLIDITRGSTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300

Query: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKHILQHC 360
           DKE+PSSG+IWSDGDLFVK TQSGLLAPTAEH++FHPS HY+NWTV+PATDALKHILQHC
Sbjct: 301 DKEEPSSGTIWSDGDLFVKGTQSGLLAPTAEHNMFHPSEHYTNWTVEPATDALKHILQHC 360

Query: 361 TGCQNIPRPADQPLVP 377
           TGCQNIPRP DQPLVP
Sbjct: 361 TGCQNIPRPTDQPLVP 376

[Close]

BLAST of CSPI04G14260 vs. ExPASy TrEMBL
Match: A0A6J1HFI4 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111463488 PE=3 SV=1)

HSP 1 Score: 676.4 bits (1744), Expect = 6.9e-191
Identity = 321/376 (85.37%), Postives = 342/376 (90.96%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60
           MGNAHGHRKHFNHGVN+SP+TNA SPSNKY+ S       +S+  M+SLPY  VDS LRA
Sbjct: 1   MGNAHGHRKHFNHGVNSSPSTNAHSPSNKYAPSGSAPPISTSTAEMESLPYALVDSRLRA 60

Query: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120
           LA QAEGFGR+AIGGLHGSVYCVTNL DDGPGSLRFGCRMKEPLWIIFEVSGTI LSSYL
Sbjct: 61  LAGQAEGFGRAAIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSYL 120

Query: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           +VSS+KTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWID
Sbjct: 121 NVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWID 180

Query: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSL+DYDDGLIDITR STDITISRC FS HDKTMLIGADPSH+GDRCIRVTIHHCFFDG
Sbjct: 181 RCSLQDYDDGLIDITRGSTDITISRCRFSRHDKTMLIGADPSHVGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRY +VHLYNNYTRNWGIYAVCASVES+I+SQCNIYEAG+KKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKAT 300

Query: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKHILQHC 360
           DKE+PSSG IWS+GDLFV  TQSGLLA TA   +FHPS HYS WTV+P TDALK ILQHC
Sbjct: 301 DKEEPSSGCIWSEGDLFVSGTQSGLLAATAGQSMFHPSDHYSAWTVEPPTDALKQILQHC 360

Query: 361 TGCQNIPRPADQPLVP 377
           TGCQNIPRP D PLVP
Sbjct: 361 TGCQNIPRPCDLPLVP 376

[Close]

BLAST of CSPI04G14260 vs. ExPASy TrEMBL
Match: A0A6J1I6H5 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111471167 PE=3 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.0e-190
Identity = 319/376 (84.84%), Postives = 342/376 (90.96%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60
           MGNAHGHRKHFNHGVN+SP+TNA SPSNKY+ S       +S+  M+SLPY  VDSSLRA
Sbjct: 3   MGNAHGHRKHFNHGVNSSPSTNAHSPSNKYTPSGSAPPISTSTAKMESLPYALVDSSLRA 62

Query: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120
           LA QAEGFGR++IGGLHGSVYCVTNL DDGPGSLRFGCRMKEPLWIIFEVSGTI LSSYL
Sbjct: 63  LAGQAEGFGRASIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSYL 122

Query: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           +VSS+KTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWID
Sbjct: 123 NVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWID 182

Query: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSL+DYDDGLIDITR STDIT+SRC FS HDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 183 RCSLQDYDDGLIDITRGSTDITVSRCRFSRHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 242

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRY ++HLYNNYTRNWGIYAVCASVES+I+SQCNIYEAG+KKVAFKYLTEKAT
Sbjct: 243 TRQRHPRVRYGKIHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKAT 302

Query: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKHILQHC 360
           DKE+PSSG IWS+GDLFV  TQSGLL  TA   +FHPS HYS WTV+P TDALK ILQHC
Sbjct: 303 DKEEPSSGCIWSEGDLFVSGTQSGLLPATAGQSMFHPSDHYSAWTVEPPTDALKQILQHC 362

Query: 361 TGCQNIPRPADQPLVP 377
           TGCQNIPRP D PLVP
Sbjct: 363 TGCQNIPRPCDLPLVP 378

[Close]

BLAST of CSPI04G14260 vs. NCBI nr
Match: XP_004142093.1 (probable pectate lyase 4 [Cucumis sativus] >KGN54214.1 hypothetical protein Csa_017940 [Cucumis sativus])

HSP 1 Score: 787.7 bits (2033), Expect = 4.4e-224
Identity = 375/376 (99.73%), Postives = 376/376 (100.00%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60
           MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA
Sbjct: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60

Query: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120
           LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL
Sbjct: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120

Query: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID
Sbjct: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180

Query: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300

Query: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKHILQHC 360
           DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYS+WTVQPATDALKHILQHC
Sbjct: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSSWTVQPATDALKHILQHC 360

Query: 361 TGCQNIPRPADQPLVP 377
           TGCQNIPRPADQPLVP
Sbjct: 361 TGCQNIPRPADQPLVP 376

[Close]

BLAST of CSPI04G14260 vs. NCBI nr
Match: XP_008447420.1 (PREDICTED: probable pectate lyase 4 [Cucumis melo] >KAA0047334.1 putative pectate lyase 4 [Cucumis melo var. makuwa])

HSP 1 Score: 761.9 bits (1966), Expect = 2.6e-216
Identity = 360/376 (95.74%), Postives = 369/376 (98.14%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60
           MGNAHGHRKHFNHGVN SPTTNAP PSNKYSSSEPTSRN SSSTNM+SLPYPHVDSSLRA
Sbjct: 1   MGNAHGHRKHFNHGVNISPTTNAPFPSNKYSSSEPTSRNSSSSTNMESLPYPHVDSSLRA 60

Query: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120
           LAAQAEGFGRSAIGGLHGSVYCVTNL+DDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSY+
Sbjct: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLSDDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYV 120

Query: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID
Sbjct: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180

Query: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSLRDYDDGLIDITR STDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 181 RCSLRDYDDGLIDITRGSTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300

Query: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKHILQHC 360
           DKE+PSSG+IWSDGDLFVK TQSGLLAPTAEH++FHPS HY+NWTV+PATDALKHILQHC
Sbjct: 301 DKEEPSSGTIWSDGDLFVKGTQSGLLAPTAEHNMFHPSEHYTNWTVEPATDALKHILQHC 360

Query: 361 TGCQNIPRPADQPLVP 377
           TGCQNIPRP DQPLVP
Sbjct: 361 TGCQNIPRPTDQPLVP 376

[Close]

BLAST of CSPI04G14260 vs. NCBI nr
Match: XP_038883952.1 (probable pectate lyase 4 [Benincasa hispida])

HSP 1 Score: 711.4 bits (1835), Expect = 4.0e-201
Identity = 340/377 (90.19%), Postives = 353/377 (93.63%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSP-TTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLR 60
           MGN HGHRKHFNH VN+SP TTNA  PSNKYS S+PT RN SS+T M+SLPY HVDSSLR
Sbjct: 1   MGNGHGHRKHFNHDVNSSPSTTNAHFPSNKYSPSQPTFRNSSSTTKMESLPYAHVDSSLR 60

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSY 120
           ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCR KEPLWIIFEVSGTI LSSY
Sbjct: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSSY 120

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           LSVSSYKT+DGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI
Sbjct: 121 LSVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180

Query: 181 DRCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSLRDYDDGLIDITR STDITISRC+FSHHDKTMLIGADPSHIGDRCIRVTIHHCFFD
Sbjct: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKA 300
           GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVES+IYSQCNIYEAGEKKVAFKYLTEKA
Sbjct: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGEKKVAFKYLTEKA 300

Query: 301 TDKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKHILQH 360
           TDKE+PSSG IWSDGDLFV  TQSGLLA TA H+ FHPS HYS+WTV+P TD+LK ILQH
Sbjct: 301 TDKEEPSSGCIWSDGDLFVNGTQSGLLAATAGHNFFHPSKHYSSWTVEPPTDSLKQILQH 360

Query: 361 CTGCQNIPRPADQPLVP 377
           CTGCQN+PRP D PLVP
Sbjct: 361 CTGCQNMPRPTDLPLVP 377

[Close]

BLAST of CSPI04G14260 vs. NCBI nr
Match: KAG6595293.1 (putative pectate lyase 21, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027305.1 putative pectate lyase 21 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 678.3 bits (1749), Expect = 3.7e-191
Identity = 324/377 (85.94%), Postives = 345/377 (91.51%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYS-SSEPTSRNPSSSTNMQSLPYPHVDSSLR 60
           MGNAHGHRKHFNHGVN+SP+TNA SPSNKY+ S    S + SS+  M+SLPY  VDSSLR
Sbjct: 1   MGNAHGHRKHFNHGVNSSPSTNAYSPSNKYTPSGSAPSISTSSTAEMESLPYALVDSSLR 60

Query: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSY 120
           ALA QAEGFGR+AIGGLHGSVYCVTNL DDGPGSLRFGCRMKEPLWIIFEVSGTI LSSY
Sbjct: 61  ALAGQAEGFGRAAIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSY 120

Query: 121 LSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           L+VSS+KTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWI
Sbjct: 121 LNVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWI 180

Query: 181 DRCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSL+DYDDGLIDITR STDITISRC FS HDKTMLIGADPSH+GDRCIRVTIHHCFFD
Sbjct: 181 DRCSLQDYDDGLIDITRGSTDITISRCRFSRHDKTMLIGADPSHVGDRCIRVTIHHCFFD 240

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKA 300
           GTRQRHPRVRY +VHLYNNYTRNWGIYAVCASVES+I+SQCNIYEAG+KKVAFKYLTEKA
Sbjct: 241 GTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKA 300

Query: 301 TDKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKHILQH 360
           TDKE+PSSG IWS+GDLFV  TQSGLLA TA   +FHPS HYS WTV+P TDALK ILQH
Sbjct: 301 TDKEEPSSGCIWSEGDLFVSGTQSGLLAATAGQSMFHPSDHYSAWTVEPPTDALKQILQH 360

Query: 361 CTGCQNIPRPADQPLVP 377
           CTGCQNIPRP D PLVP
Sbjct: 361 CTGCQNIPRPCDLPLVP 377

[Close]

BLAST of CSPI04G14260 vs. NCBI nr
Match: XP_022963206.1 (probable pectate lyase 4 [Cucurbita moschata])

HSP 1 Score: 676.4 bits (1744), Expect = 1.4e-190
Identity = 321/376 (85.37%), Postives = 342/376 (90.96%), Query Frame = 0


Query: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60
           MGNAHGHRKHFNHGVN+SP+TNA SPSNKY+ S       +S+  M+SLPY  VDS LRA
Sbjct: 1   MGNAHGHRKHFNHGVNSSPSTNAHSPSNKYAPSGSAPPISTSTAEMESLPYALVDSRLRA 60

Query: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120
           LA QAEGFGR+AIGGLHGSVYCVTNL DDGPGSLRFGCRMKEPLWIIFEVSGTI LSSYL
Sbjct: 61  LAGQAEGFGRAAIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSYL 120

Query: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           +VSS+KTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWID
Sbjct: 121 NVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWID 180

Query: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSL+DYDDGLIDITR STDITISRC FS HDKTMLIGADPSH+GDRCIRVTIHHCFFDG
Sbjct: 181 RCSLQDYDDGLIDITRGSTDITISRCRFSRHDKTMLIGADPSHVGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRY +VHLYNNYTRNWGIYAVCASVES+I+SQCNIYEAG+KKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKAT 300

Query: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKHILQHC 360
           DKE+PSSG IWS+GDLFV  TQSGLLA TA   +FHPS HYS WTV+P TDALK ILQHC
Sbjct: 301 DKEEPSSGCIWSEGDLFVSGTQSGLLAATAGQSMFHPSDHYSAWTVEPPTDALKQILQHC 360

Query: 361 TGCQNIPRPADQPLVP 377
           TGCQNIPRP D PLVP
Sbjct: 361 TGCQNIPRPCDLPLVP 376

[Close]

BLAST of CSPI04G14260 vs. TAIR 10
Match: AT3G55140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 526.2 bits (1354), Expect = 2.2e-149
Identity = 239/326 (73.31%), Postives = 278/326 (85.28%), Query Frame = 0


Query: 46  MQSLPYPHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLW 105
           M SLPY   D SLRALA +AEGFGR A+GGLHG +Y VT+LADDGPG+LR G R KEPLW
Sbjct: 1   MTSLPYADADCSLRALAGRAEGFGRFAVGGLHGDLYVVTSLADDGPGTLREGGRRKEPLW 60

Query: 106 IIFEVSGTIDLSSYLSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDV 165
           I+F VSGTI+L+SYLSVSSYKT+DGRGQRIKLTGKG+RLKECEH+IICNLEFEGGRGHDV
Sbjct: 61  IVFAVSGTINLNSYLSVSSYKTIDGRGQRIKLTGKGIRLKECEHIIICNLEFEGGRGHDV 120

Query: 166 DGIQIKPNSKHIWIDRCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIG 225
           DGIQIKP S+HIWIDRCSLRDYDDGLIDITR STDIT+SRCYF+ HDKTMLIGADPSH+ 
Sbjct: 121 DGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAQHDKTMLIGADPSHVE 180

Query: 226 DRCIRVTIHHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEA 285
           DRCIRVTIHHCFFDGTRQR PR+R+ +VHLYNNYTRNWGIYAVCASVE++++SQCNIYEA
Sbjct: 181 DRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGIYAVCASVEAQVFSQCNIYEA 240

Query: 286 GEKKVAFKYLTEKATDKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWT 345
           G KK  F+Y +EKA DKE+  +G + S+ DLF+   Q  L+   +E  +FHPS HY  WT
Sbjct: 241 GVKKKTFEYYSEKAADKEEARTGLVRSENDLFLNGAQPSLMTGASEECVFHPSEHYPTWT 300

Query: 346 VQPATDALKHILQHCTGCQNIPRPAD 372
           V+P ++ LK I+Q CTG Q++ RP+D
Sbjct: 301 VEPPSETLKQIMQICTGWQSLSRPSD 326

[Close]

BLAST of CSPI04G14260 vs. TAIR 10
Match: AT3G09540.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 487.6 bits (1254), Expect = 8.7e-138
Identity = 243/378 (64.29%), Postives = 298/378 (78.84%), Query Frame = 0


Query: 1   MGNAHG-HRKHFNHGVNTSP--TTNAPSPSNKYSSSEPTSRNPSSST--NMQSLPYPHVD 60
           MGN HG HR H  HG +  P    N+P P   Y+++   +  PSS +  +M   PY HVD
Sbjct: 1   MGNLHGIHRSH--HGGSNFPGEAPNSPFPP-PYTAAPAPAPAPSSPSDHHMTVGPYCHVD 60

Query: 61  SSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTID 120
           SSLR+LA +AEGFGR+A+GGL+G +  VT+LAD+GPGSLR  C+  EPLWI+F+VSGTI+
Sbjct: 61  SSLRSLAGKAEGFGRAAVGGLNGPICHVTSLADEGPGSLREACKRPEPLWIVFDVSGTIN 120

Query: 121 LSSYLSVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSK 180
           LSS+++VSS+ TVDGRGQ++K+TGKGLRLKECE+VIICNLEFEGG G D D IQIKP S 
Sbjct: 121 LSSFVNVSSHTTVDGRGQKVKITGKGLRLKECENVIICNLEFEGGVGPDADAIQIKPKSH 180

Query: 181 HIWIDRCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHH 240
           +IWIDRCSL++Y DGLIDITR STDIT+SRC+F +H+KTMLIGAD SH+ DRCIRVTIHH
Sbjct: 181 NIWIDRCSLKNYYDGLIDITRESTDITVSRCHFMNHNKTMLIGADTSHVTDRCIRVTIHH 240

Query: 241 CFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYL 300
           CFFDGTRQRHPRVR+A+VHL+NNYTR+W IYAV A VES+I+SQCNIYEAGEKK  FKY+
Sbjct: 241 CFFDGTRQRHPRVRFAKVHLFNNYTRHWAIYAVGAGVESQIHSQCNIYEAGEKKTVFKYI 300

Query: 301 TEKATDKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSNWTVQPATDALKH 360
           TEKA DKEKP +G + S+GDL +   +S  L+   E  +F P  HYS WTV+  TD LK+
Sbjct: 301 TEKAADKEKPGAGFVRSEGDLLLNGAKS-CLSQGGERYVFSPIQHYSEWTVESPTDILKN 360

Query: 361 ILQHCTGCQNIPRPADQP 374
            L+H TG QN+P P D+P
Sbjct: 361 YLKHSTGWQNLPLPLDRP 374

[Close]

BLAST of CSPI04G14260 vs. TAIR 10
Match: AT3G55140.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 470.3 bits (1209), Expect = 1.4e-132
Identity = 210/286 (73.43%), Postives = 246/286 (86.01%), Query Frame = 0


Query: 86  LADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYLSVSSYKTVDGRGQRIKLTGKGLRLK 145
           + DDGPG+LR G R KEPLWI+F VSGTI+L+SYLSVSSYKT+DGRGQRIKLTGKG+RLK
Sbjct: 17  ILDDGPGTLREGGRRKEPLWIVFAVSGTINLNSYLSVSSYKTIDGRGQRIKLTGKGIRLK 76

Query: 146 ECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRASTDITISR 205
           ECEH+IICNLEFEGGRGHDVDGIQIKP S+HIWIDRCSLRDYDDGLIDITR STDIT+SR
Sbjct: 77  ECEHIIICNLEFEGGRGHDVDGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSR 136

Query: 206 CYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGI 265
           CYF+ HDKTMLIGADPSH+ DRCIRVTIHHCFFDGTRQR PR+R+ +VHLYNNYTRNWGI
Sbjct: 137 CYFAQHDKTMLIGADPSHVEDRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGI 196

Query: 266 YAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKATDKEKPSSGSIWSDGDLFVKDTQSGL 325
           YAVCASVE++++SQCNIYEAG KK  F+Y +EKA DKE+  +G + S+ DLF+   Q  L
Sbjct: 197 YAVCASVEAQVFSQCNIYEAGVKKKTFEYYSEKAADKEEARTGLVRSENDLFLNGAQPSL 256

Query: 326 LAPTAEHDLFHPSHHYSNWTVQPATDALKHILQHCTGCQNIPRPAD 372
           +   +E  +FHPS HY  WTV+P ++ LK I+Q CTG Q++ RP+D
Sbjct: 257 MTGASEECVFHPSEHYPTWTVEPPSETLKQIMQICTGWQSLSRPSD 302

[Close]

BLAST of CSPI04G14260 vs. TAIR 10
Match: AT1G30350.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 187.2 bits (474), Expect = 2.4e-47
Identity = 108/262 (41.22%), Postives = 153/262 (58.40%), Query Frame = 0


Query: 38  RNPSSSTNMQSLPYPHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADD----GPGS 97
           RNP  +TN Q            ALA  A G+G++AIGG +G +Y VTN +D+     PG+
Sbjct: 44  RNPKWATNRQ------------ALAHCAVGYGKAAIGGKNGPIYVVTNPSDNPTRPSPGT 103

Query: 98  LRFGCRMKEPLWIIFEVSGTIDLSSYLSVSSYKTVDGRGQRIKL-TGKGLRLKECEHVII 157
           LR+     +PLWI F     I L S L ++SYKT+DGRG ++++  G  LR+++ +HVII
Sbjct: 104 LRYAVSQPKPLWITFARDMVIVLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVII 163

Query: 158 CNLEFEGGR----GHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRASTDITISRCYF 217
             +     +    G D DGI++   S H+WID C L    DGLID+  +ST +TIS  YF
Sbjct: 164 HGISIHDCKADPNGMDGDGIRVF-QSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYF 223

Query: 218 SHHDKTMLIGADPSHIGDRCIRVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYA 277
           + HDK ML+G D S++GD+ +RVTI  + F  G  +R PRVR    H+ NN    W +YA
Sbjct: 224 TQHDKVMLLGHDDSYMGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYA 283

Query: 278 VCASVESKIYSQCNIYEAGEKK 290
           +  S    I+S+ N + A EK+
Sbjct: 284 IGGSANPIIFSEGNYFVAPEKR 292

[Close]

BLAST of CSPI04G14260 vs. TAIR 10
Match: AT5G04310.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 1.3e-45
Identity = 116/293 (39.59%), Postives = 158/293 (53.92%), Query Frame = 0


Query: 52  PHVDSSLRALAAQAEGFGRSAIGGLHGSVYCVTNLADDG-----PGSLRFGCRMKEPLWI 111
           P+  ++ + LA  + GFG+  +GG  G  Y VT+ +D+      PG+LR      EPLWI
Sbjct: 105 PNWSANRQRLADCSIGFGQGTLGGKGGQFYLVTDSSDNDAANPIPGTLRHAVIQPEPLWI 164

Query: 112 IFEVSGTIDLSSYLSVSSYKTVDGRGQRIKLTGKG-LRLKECEHVIICNLEFE------- 171
           IF     I L   L + SYKT+DGRG  I++TG G L +++  HVII N+          
Sbjct: 165 IFSSDMGIKLKHELIIGSYKTIDGRGTNIQITGHGCLTIQQVSHVIIHNVHIHHCKPSGN 224

Query: 172 ----------GGRG-HDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRASTDITISRCY 231
                     G RG  D DGI +   S HIW+D CSL    DGLID+  AST +TIS  Y
Sbjct: 225 TLVASSPTHVGFRGVSDGDGISVSA-SHHIWVDHCSLGYCADGLIDVILASTAVTISNNY 284

Query: 232 FSHHDKTMLIGADPSHIGDRCIRVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIY 291
           FSHHD+ ML+G D  +  D+ ++VTI  + F +G  QR PR R+  +H+ NN    W +Y
Sbjct: 285 FSHHDEVMLLGHDDRYTADKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMY 344

Query: 292 AVCASVESKIYSQCNIYEAGEKKVAFKYLTEKATDKEKPSSGSIW-SDGDLFV 319
           A+  S    I SQ N Y A     A K +T++    EK  SG  W ++GD+ V
Sbjct: 345 AIGGSASPTINSQGNRYTAPIDPNA-KEVTKRVDSNEKHWSGWNWRTEGDVMV 395

The following BLAST results are available for this feature:

BLAST of CSPI04G14260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8G4	3.4e-46	41.22	Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1	[more]
Q9FM66	2.5e-44	37.03	Putative pectate lyase 21 OS=Arabidopsis thaliana OX=3702 GN=At5g55720 PE=3 SV=1	[more]
O65388	3.5e-43	39.62	Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2	[more]
Q9LTZ0	1.9e-41	35.29	Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2	[more]
Q93Z04	1.9e-41	37.30	Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1	[more]

BLAST of CSPI04G14260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZG2	2.1e-224	99.73	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_4G293240 PE=3 SV=1	[more]
A0A5A7TWJ1	1.2e-216	95.74	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001550...	[more]
A0A1S3BGV0	1.2e-216	95.74	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103489868 PE=3 SV=1	[more]
A0A6J1HFI4	6.9e-191	85.37	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111463488 PE=3 SV=1	[more]
A0A6J1I6H5	2.0e-190	84.84	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111471167 PE=3 SV=1	[more]

BLAST of CSPI04G14260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142093.1	4.4e-224	99.73	probable pectate lyase 4 [Cucumis sativus] >KGN54214.1 hypothetical protein Csa_...	[more]
XP_008447420.1	2.6e-216	95.74	PREDICTED: probable pectate lyase 4 [Cucumis melo] >KAA0047334.1 putative pectat...	[more]
XP_038883952.1	4.0e-201	90.19	probable pectate lyase 4 [Benincasa hispida]	[more]
KAG6595293.1	3.7e-191	85.94	putative pectate lyase 21, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_022963206.1	1.4e-190	85.37	probable pectate lyase 4 [Cucurbita moschata]	[more]

BLAST of CSPI04G14260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55140.1	2.2e-149	73.31	Pectin lyase-like superfamily protein	[more]
AT3G09540.1	8.7e-138	64.29	Pectin lyase-like superfamily protein	[more]
AT3G55140.2	1.4e-132	73.43	Pectin lyase-like superfamily protein	[more]
AT1G30350.1	2.4e-47	41.22	Pectin lyase-like superfamily protein	[more]
AT5G04310.1	1.3e-45	39.59	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 64..81 score: 49.74 coord: 119..135 score: 49.58 coord: 266..285 score: 38.57
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 76..289 e-value: 3.4E-34 score: 129.6
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 120..281 e-value: 7.1E-26 score: 91.1
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 50..359 e-value: 2.2E-89 score: 301.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..50
None	No IPR available	PANTHER	PTHR31683:SF113	PECTATE LYASE	coord: 43..369
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 43..369
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 64..368

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G14260.1	CSPI04G14260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0008270	zinc ion binding