CSPI04G14090 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G14090
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein MODIFIER OF SNC1 11-like
Location	Chr4: 11952151 .. 11955434 (+)
RNA-Seq Expression	CSPI04G14090
Synteny	CSPI04G14090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAACGAATAGAAAAGCTGTGCTCTCCCTCTCTTTCACGCGGCAATTCCCCTTTGCAGCTTTCGTGGTTCGCAAGCAGCTCAGATTAGGTTTCCGGTTTCAAATCTGCTCCTCCAATGGCCACGGTAGCACCCGCAGGACTCAATGACATTAGCAATAGCAAGAATCCGCTTGGAGAAAACCCTAGTCAAACCCTAGAAACGACGATTTCTTCATCTGCTCAGCCTCCTGCCTCCGTTCCGCCTTCGTCAACTGATGGCGGGTCATCCAAGGAAGGGGATGAATCCAAATGCGCCGGTAAGCCGTCGGCTGAAGATGACGGTGCCCCGGTTTCTGATGTTCAGAGGAAAATGCGCCGTGCTGAGCGTTTTGGAATTTCGGTGCAATTGTCTGAAGAGGAAAAGCGTAATTCTCGAGCGGAACGGTGAGACTATTTCTTGTTTATCGGTCCATTTCTTGGTTATCGGTCCATTTCTTGGTTATCGGTCTACGCTGCATGTATGTGTTCGTTCTTGTGTTGTTGCGTATTTGAATCTATTTCTCTTGGGGGATCAAGAGCTTCTGCACAGTTATTTTCCTGTGATTGCATCGAAACTATATGTGTTTATCTCTTTTTACGGACAAATATAGTGATAACTAGTCACTGCCACTGGTACAAATATTACGTTGCTATCTCGCAACTGCCGAGTAGGGATTTTAACAATCCAAAAAAATAAATTCTTGCACCTCCCGTCATATGTTGGGTCGATGATTTGCTTGTGCAGTTACGAGGTGATTTGGATCTCGTAGATTATGAACTTCTGGAGCATATCAGACATGTATCGTTAGTTTGTCTGATGTTTCGGTTTTAATGTTCTATCTAATTGTTTGTAATATTCGGGTAATGGTCTGAAGTTCTTATCGGAGGTATTGGCGTTCTCTGTCATCTCGTTTCAAGAATTATAATATTCATCCTTTTCTTTCTTTTCCAAGTTATGCTGAAAGTCATATTTCTCTTTTATTTTTCCTTCAAGTATCTTTAATGTTGATTCTTGGGGATGATTGCAGGTTTGGTATGGGTACCACAACTAATGGATTGGGAGCATCTAACAAGACAGAGGAGGTGAAGAGAAAGGCTAGAGCTGAGAGGTACTTTTGATTGAATTATGTATTGTTGGCTCACCCTGCAAAGGAATTCAATTTATAGTCTTTTGCTTGGTTAAATTTTCTTTCAAACTCTTGCCCCCTTATTTTTGGTCTTTTAGATTTGGGCTTTCTGCATCTGTGACCACTGATGATGAGGCAAAGAAGAAAGCTCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGACCCTCAGGAGGAAGAAAAAAGGAAAGCAAGGGCAATCAGGTAGTGGGCTTGGTTTTTTCTTTCCCTGGTTGTGGCTAATTGAAAATGCTTCCAGTTCTATCATCTGTGGTCCATAGAAATCTTGTATGGAGTCCATAAACATTAAAATGCTATCTAACATATTGTTTGTTTTTCCCTCTATTTTCTGCGTGAAGGTTTTCTAATCCAACACCAAACTCTCTTACACAAGTGGATGGGAAAGGAAACGTTGAGACGGTAATGTTATGCTATTGTTTTAAGTTGATTTTGCCATCGTGTAAGATCTAGGAAACAGTTGTGTGTTACTAGTTTCCAATGCTCTTGTTCCCACTGATGATTCCTATTGTTTGTAATCAGATTGCAGATGTTGCAGGCAAGTCTGGAGGTGGTGCCTGAAAAGAACCTTCCCTTTTGATGGCAAGATAGCTTTTGCTTGTAAATTTTTTTTTTGTGGTTTGTGTTCCTCTCTCCTTTTATTTTATTTTATGTTTTTTTTTTAGATTTTATAATTTCATTTTAAAGTTTGATTGGCATTCCGACTTCAGATTTATATCTTATCCAAATCTATATTGTTTCTTGTTATACCTGTGTTATTGAGTCTGATGATTGACTTATTTCTCTGGCAGGTCTAGTATCCTGGCTAGGATTCCCCGTAATGGCTTCCATACCCTTGTGCATTCCTTTATAATGTTATCTAGTTCAAAAGTCATCCATTCTGAGGGCAGATTTCATACTGCGAGGTGCTGTACTATGTGCTGAAGTGAGACAGGTTCCCTAGATTCAGTTGTGAGGATAATAACGCTCTGGTTAGGTGTTATGTAGTAGCAAATACCTCCCTACGTCAAACCTATATTACAAGTTTTTTAAAGAATATCAGAAATTTCTGAAGTTTTTAGCCCTCCAATGTTCCGGTTATCATCTTCAGTTTATAACTCCCTTATGATGACAAGTTGGATGTTCATGATATCATTTGAGCGGCAGTGTTAAGTTTCCATGTGCATTGGGTACTAGCTGATTCTGACCGGTTGAAATTTACTAACTTGTCAAATTGACCTTTAGGATTAGAAAGTAAACATATCTTGCTTTTCTTTTAATTAAATATCATTAGGTTTTTAGTTTCTAACTATAATTTAGTTTGGATTTTTATGTTGTTTCTTTTGAATGATAGGTTTTTACTTCGCTGACGGTAATAGTGTAAGACTAATGGCAAACTTTCAATATTAGTAAACTTGCATGTATATCTTTTGCCTTTATTATCCAATCACTTACGTTTAAGGCTTGGTCTCTTTATATGATGCCAGCACGTCTCATCTAATGGCATCACTTATACTACTTATCATGGGAATGATTGCTACACTCTTTAGATGCCTAGTTTTACTATAACCTGCAGAATGCTTCGATAAGAATGGCCATGTGTTGAATGTTATTTAGAACTGCCGTTCAAAATGTCATCATGAAATAATAACTCCAACTTGTGTGAGAATAAACTGAAGATAAGTCTTGGAAGGGGAAGAAATTATCAATTCCATTGGTAAGTGGTCGTGTGGGAGAAGCTGAATTCTCTCTTCCAACTTGGGAGCTCTCTGATATTCTTGTTTGGTAATATAGGATAGGGCGTCTTGGGAGGTATTTGTTGATCTCTTAAAAGTCTGTATCGAGGTCTGTAGCCGAGAATGGATCATACTCAAAAAGTAGGTTTCTCGTTAAGTTTTTGTTGTTTCTTTCTTCTTTTCCTTTTATCTTTATTTGCTTAGCTACTTAGCAGCTACATGTATTTAGTTTCTTTTGGATTTTTGGTTGGATGTAATGGTATGGAAGGACCGCAACATTTATTGAGGGAATCAATATTTTGATCAAAATTTCTTTTGCTACACACACACAACTCTTGCTCCTTGCAAACGATTACCAGAACGAAGTAACAATTGTATTACCA

mRNA sequence

CAAAAAACGAATAGAAAAGCTGTGCTCTCCCTCTCTTTCACGCGGCAATTCCCCTTTGCAGCTTTCGTGGTTCGCAAGCAGCTCAGATTAGGTTTCCGGTTTCAAATCTGCTCCTCCAATGGCCACGGTAGCACCCGCAGGACTCAATGACATTAGCAATAGCAAGAATCCGCTTGGAGAAAACCCTAGTCAAACCCTAGAAACGACGATTTCTTCATCTGCTCAGCCTCCTGCCTCCGTTCCGCCTTCGTCAACTGATGGCGGGTCATCCAAGGAAGGGGATGAATCCAAATGCGCCGGTAAGCCGTCGGCTGAAGATGACGGTGCCCCGGTTTCTGATGTTCAGAGGAAAATGCGCCGTGCTGAGCGTTTTGGAATTTCGGTGCAATTGTCTGAAGAGGAAAAGCGTAATTCTCGAGCGGAACGGTTTGGTATGGGTACCACAACTAATGGATTGGGAGCATCTAACAAGACAGAGGAGGTGAAGAGAAAGGCTAGAGCTGAGAGATTTGGGCTTTCTGCATCTGTGACCACTGATGATGAGGCAAAGAAGAAAGCTCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGACCCTCAGGAGGAAGAAAAAAGGAAAGCAAGGGCAATCAGGTTTTCTAATCCAACACCAAACTCTCTTACACAAGTGGATGGGAAAGGAAACGTTGAGACGATTGCAGATGTTGCAGGCAAGTCTGGAGGTGGTGCCTGAAAAGAACCTTCCCTTTTGATGGCAAGATAGCTTTTGCTTGTAAATTTTTTTTTTGTGGTCTAGTATCCTGGCTAGGATTCCCCGTAATGGCTTCCATACCCTTGTGCATTCCTTTATAATGTTATCTAGTTCAAAAGTCATCCATTCTGAGGGCAGATTTCATACTGCGAGGTGCTGTACTATGTGCTGAAGTGAGACAGGTTCCCTAGATTCAGTTGTGAGGATAATAACGCTCTGGTTAGGTGTTATGTAGTAGCAAATACCTCCCTACGTCAAACCTATATTACAAGTTTTTTAAAGAATATCAGAAATTTCTGAAGTTTTTAGCCCTCCAATGTTCCGGTTATCATCTTCAGTTTATAACTCCCTTATGATGACAAGTTGGATGTTCATGATATCATTTGAGCGGCAGTGTTAAGTTTCCATGTGCATTGGGTACTAGCTGATTCTGACCGGTTGAAATTTACTAACTTGTCAAATTGACCTTTAGGATTAGAAAGTAAACATATCTTGCTTTTCTTTTAATTAAATATCATTAGGTTTTTAGTTTCTAACTATAATTTAGTTTGGATTTTTATGTTGTTTCTTTTGAATGATAGGTTTTTACTTCGCTGACGGTAATAGTGTAAGACTAATGGCAAACTTTCAATATTAGTAAACTTGCATGTATATCTTTTGCCTTTATTATCCAATCACTTACGTTTAAGGCTTGGTCTCTTTATATGATGCCAGCACGTCTCATCTAATGGCATCACTTATACTACTTATCATGGGAATGATTGCTACACTCTTTAGATGCCTAGTTTTACTATAACCTGCAGAATGCTTCGATAAGAATGGCCATGTGTTGAATGTTATTTAGAACTGCCGTTCAAAATGTCATCATGAAATAATAACTCCAACTTGTGTGAGAATAAACTGAAGATAAGTCTTGGAAGGGGAAGAAATTATCAATTCCATTGGTAAGTGGTCGTGTGGGAGAAGCTGAATTCTCTCTTCCAACTTGGGAGCTCTCTGATATTCTTGTTTGGTAATATAGGATAGGGCGTCTTGGGAGGTATTTGTTGATCTCTTAAAAGTCTGTATCGAGGTCTGTAGCCGAGAATGGATCATACTCAAAAAGTAGGTTTCTCGTTAAGTTTTTGTTGTTTCTTTCTTCTTTTCCTTTTATCTTTATTTGCTTAGCTACTTAGCAGCTACATGTATTTAGTTTCTTTTGGATTTTTGGTTGGATGTAATGGTATGGAAGGACCGCAACATTTATTGAGGGAATCAATATTTTGATCAAAATTTCTTTTGCTACACACACACAACTCTTGCTCCTTGCAAACGATTACCAGAACGAAGTAACAATTGTATTACCA

Coding sequence (CDS)

ATGGCCACGGTAGCACCCGCAGGACTCAATGACATTAGCAATAGCAAGAATCCGCTTGGAGAAAACCCTAGTCAAACCCTAGAAACGACGATTTCTTCATCTGCTCAGCCTCCTGCCTCCGTTCCGCCTTCGTCAACTGATGGCGGGTCATCCAAGGAAGGGGATGAATCCAAATGCGCCGGTAAGCCGTCGGCTGAAGATGACGGTGCCCCGGTTTCTGATGTTCAGAGGAAAATGCGCCGTGCTGAGCGTTTTGGAATTTCGGTGCAATTGTCTGAAGAGGAAAAGCGTAATTCTCGAGCGGAACGGTTTGGTATGGGTACCACAACTAATGGATTGGGAGCATCTAACAAGACAGAGGAGGTGAAGAGAAAGGCTAGAGCTGAGAGATTTGGGCTTTCTGCATCTGTGACCACTGATGATGAGGCAAAGAAGAAAGCTCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGACCCTCAGGAGGAAGAAAAAAGGAAAGCAAGGGCAATCAGGTTTTCTAATCCAACACCAAACTCTCTTACACAAGTGGATGGGAAAGGAAACGTTGAGACGATTGCAGATGTTGCAGGCAAGTCTGGAGGTGGTGCCTGA

Protein sequence

MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCAGKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTEEVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNSLTQVDGKGNVETIADVAGKSGGGA*

Homology

[Close]

BLAST of CSPI04G14090 vs. ExPASy Swiss-Prot
Match: Q9LZ08 (Protein MODIFIER OF SNC1 11 OS=Arabidopsis thaliana OX=3702 GN=MOS11 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.1e-26
Identity = 84/166 (50.60%), Postives = 107/166 (64.46%), Query Frame = 0


Query: 20  GENPSQTLE---TTISSSAQPPASVPPSSTDGGSSKEGDESKCAGKPSAEDDG--APVSD 79
           GENP + ++   T +  +           +D G  KE  +S   G  +  D G  +PV D
Sbjct: 21  GENPKKIVDLNTTELDRTDDILDGEVKGFSDSGEKKEETDSNGIGSTAGVDSGDISPVDD 80

Query: 80  VQRKMRRAERFGISVQLSEEEKRNSRAERFG--MGTTTNGLGASNKTEEVKRKARAERFG 139
           +Q+K+RRAERFG+SV+L+EEEKRNSRAERFG       NG   + K EE+KRKARA+RFG
Sbjct: 81  IQKKIRRAERFGVSVKLTEEEKRNSRAERFGTVAAAVVNGSEGTKKAEELKRKARADRFG 140

Query: 140 L-SASVTTD---DEAKKKARLARFSSTSKPDPQEEEKRKARAIRFS 175
           + SA+ TTD   +EAKKKARLARF   +K D  EE KRKARA+RFS
Sbjct: 141 VPSATSTTDKTEEEAKKKARLARFGKETKVDSAEENKRKARALRFS 186

[Close]

BLAST of CSPI04G14090 vs. ExPASy Swiss-Prot
Match: P82979 (SAP domain-containing ribonucleoprotein OS=Homo sapiens OX=9606 GN=SARNP PE=1 SV=3)

HSP 1 Score: 47.0 bits (110), Expect = 3.0e-04
Identity = 45/114 (39.47%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 72  VSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTT-TNGLGASNK--TEEVKRKARA 131
           +   +R  +RAERF + V L  E K+ +RA RFG+ +  T GL + NK      K K RA
Sbjct: 97  IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 156

Query: 132 ERFGL---SASVTTDDEAKKKARLARF------SSTSKPDPQEEEKRKARAIRF 174
           +RFGL   S S  ++D+ K K R  RF      + T   +  E +KRK RA RF
Sbjct: 157 QRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207

[Close]

BLAST of CSPI04G14090 vs. ExPASy Swiss-Prot
Match: Q5R4V4 (SAP domain-containing ribonucleoprotein OS=Pongo abelii OX=9601 GN=SARNP PE=2 SV=3)

HSP 1 Score: 47.0 bits (110), Expect = 3.0e-04
Identity = 45/114 (39.47%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 72  VSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTT-TNGLGASNK--TEEVKRKARA 131
           +   +R  +RAERF + V L  E K+ +RA RFG+ +  T GL + NK      K K RA
Sbjct: 97  IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 156

Query: 132 ERFGL---SASVTTDDEAKKKARLARF------SSTSKPDPQEEEKRKARAIRF 174
           +RFGL   S S  ++D+ K K R  RF      + T   +  E +KRK RA RF
Sbjct: 157 QRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207

[Close]

BLAST of CSPI04G14090 vs. ExPASy TrEMBL
Match: A0A0A0L0R4 (Tho1_MOS11_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G293070 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.0e-100
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60
           MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60

Query: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120
           GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE
Sbjct: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNVETIADVAGKSGGGA 205
           LTQVDGKGNVETIADVAGKSGGGA
Sbjct: 181 LTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of CSPI04G14090 vs. ExPASy TrEMBL
Match: A0A5A7TZD8 (Protein MODIFIER OF SNC1 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001340 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.4e-97
Identity = 199/204 (97.55%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60
           MATVAPAGLNDISNSKNPLGENPSQTLE TISSSAQ PASVPPSSTDGGSSKEGDESKC+
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120
           GKPSA DDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNVETIADVAGKSGGGA 205
           +TQVDGKGNVETIADVAGKSGGGA
Sbjct: 181 VTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of CSPI04G14090 vs. ExPASy TrEMBL
Match: A0A1S3BHQ8 (protein MODIFIER OF SNC1 11-like OS=Cucumis melo OX=3656 GN=LOC103489757 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.4e-97
Identity = 199/204 (97.55%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60
           MATVAPAGLNDISNSKNPLGENPSQTLE TISSSAQ PASVPPSSTDGGSSKEGDESKC+
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120
           GKPSA DDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNVETIADVAGKSGGGA 205
           +TQVDGKGNVETIADVAGKSGGGA
Sbjct: 181 VTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of CSPI04G14090 vs. ExPASy TrEMBL
Match: A0A6J1GD78 (protein MODIFIER OF SNC1 11-like OS=Cucurbita moschata OX=3662 GN=LOC111453127 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.9e-86
Identity = 182/204 (89.22%), Postives = 189/204 (92.65%), Query Frame = 0


Query: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60
           MATVA AG+NDISNSKNPLGENPSQTL+ TISSSAQPP SVP SSTDGGSSKEGDESK +
Sbjct: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60

Query: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120
            K S E DG PVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNVETIADVAGKSGGGA 205
           LTQVDGKGN+ETIAD+AGK+GGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of CSPI04G14090 vs. ExPASy TrEMBL
Match: A0A6J1IR28 (protein MODIFIER OF SNC1 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477977 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.8e-84
Identity = 180/204 (88.24%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60
           MATVA AG+NDISNSKN LGENPSQTL+ TISSSAQPP SVP SSTDGGSSKE DESK +
Sbjct: 1   MATVASAGINDISNSKNSLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEMDESKGS 60

Query: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120
            K S E DG PVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNVETIADVAGKSGGGA 205
           LTQVDGKGN+ETIAD+AGK+GGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of CSPI04G14090 vs. NCBI nr
Match: XP_031740008.1 (protein MODIFIER OF SNC1 11 [Cucumis sativus] >KGN54197.1 hypothetical protein Csa_017918 [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 8.2e-100
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60
           MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60

Query: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120
           GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE
Sbjct: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNVETIADVAGKSGGGA 205
           LTQVDGKGNVETIADVAGKSGGGA
Sbjct: 181 LTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of CSPI04G14090 vs. NCBI nr
Match: XP_008447291.1 (PREDICTED: protein MODIFIER OF SNC1 11-like [Cucumis melo] >KAA0047316.1 protein MODIFIER OF SNC1 11-like [Cucumis melo var. makuwa])

HSP 1 Score: 363.6 bits (932), Expect = 1.1e-96
Identity = 199/204 (97.55%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60
           MATVAPAGLNDISNSKNPLGENPSQTLE TISSSAQ PASVPPSSTDGGSSKEGDESKC+
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120
           GKPSA DDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNVETIADVAGKSGGGA 205
           +TQVDGKGNVETIADVAGKSGGGA
Sbjct: 181 VTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of CSPI04G14090 vs. NCBI nr
Match: XP_038882639.1 (protein MODIFIER OF SNC1 11 [Benincasa hispida])

HSP 1 Score: 335.1 bits (858), Expect = 4.2e-88
Identity = 187/204 (91.67%), Postives = 193/204 (94.61%), Query Frame = 0


Query: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60
           MATVA AGLNDISNSK+PLGENPSQTL+ TISSSAQPPASVP SSTDGGSSK+ DESK +
Sbjct: 1   MATVASAGLNDISNSKSPLGENPSQTLDPTISSSAQPPASVPSSSTDGGSSKDRDESKGS 60

Query: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120
           GK S E DGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGT TNGLGASNKTE
Sbjct: 61  GKASVEGDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTATNGLGASNKTE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180
           EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNVETIADVAGKSGGGA 205
            TQ+DGKGNVETIADVAGK+GGGA
Sbjct: 181 PTQMDGKGNVETIADVAGKAGGGA 204

[Close]

BLAST of CSPI04G14090 vs. NCBI nr
Match: XP_022949856.1 (protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949857.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949858.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >KAG6603695.1 Protein MODIFIER OF SNC1 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033871.1 Protein MODIFIER OF SNC1 11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328.6 bits (841), Expect = 4.0e-86
Identity = 182/204 (89.22%), Postives = 189/204 (92.65%), Query Frame = 0


Query: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60
           MATVA AG+NDISNSKNPLGENPSQTL+ TISSSAQPP SVP SSTDGGSSKEGDESK +
Sbjct: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60

Query: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120
            K S E DG PVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNVETIADVAGKSGGGA 205
           LTQVDGKGN+ETIAD+AGK+GGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of CSPI04G14090 vs. NCBI nr
Match: XP_022977777.1 (protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977778.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977779.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima])

HSP 1 Score: 322.0 bits (824), Expect = 3.7e-84
Identity = 180/204 (88.24%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60
           MATVA AG+NDISNSKN LGENPSQTL+ TISSSAQPP SVP SSTDGGSSKE DESK +
Sbjct: 1   MATVASAGINDISNSKNSLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEMDESKGS 60

Query: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120
            K S E DG PVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNVETIADVAGKSGGGA 205
           LTQVDGKGN+ETIAD+AGK+GGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of CSPI04G14090 vs. TAIR 10
Match: AT5G02770.1 (unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; Bacteria - 54; Metazoa - 249; Fungi - 22; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). )

HSP 1 Score: 118.6 bits (296), Expect = 5.8e-27
Identity = 84/166 (50.60%), Postives = 107/166 (64.46%), Query Frame = 0


Query: 20  GENPSQTLE---TTISSSAQPPASVPPSSTDGGSSKEGDESKCAGKPSAEDDG--APVSD 79
           GENP + ++   T +  +           +D G  KE  +S   G  +  D G  +PV D
Sbjct: 21  GENPKKIVDLNTTELDRTDDILDGEVKGFSDSGEKKEETDSNGIGSTAGVDSGDISPVDD 80

Query: 80  VQRKMRRAERFGISVQLSEEEKRNSRAERFG--MGTTTNGLGASNKTEEVKRKARAERFG 139
           +Q+K+RRAERFG+SV+L+EEEKRNSRAERFG       NG   + K EE+KRKARA+RFG
Sbjct: 81  IQKKIRRAERFGVSVKLTEEEKRNSRAERFGTVAAAVVNGSEGTKKAEELKRKARADRFG 140

Query: 140 L-SASVTTD---DEAKKKARLARFSSTSKPDPQEEEKRKARAIRFS 175
           + SA+ TTD   +EAKKKARLARF   +K D  EE KRKARA+RFS
Sbjct: 141 VPSATSTTDKTEEEAKKKARLARFGKETKVDSAEENKRKARALRFS 186

The following BLAST results are available for this feature:

BLAST of CSPI04G14090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ08	8.1e-26	50.60	Protein MODIFIER OF SNC1 11 OS=Arabidopsis thaliana OX=3702 GN=MOS11 PE=1 SV=1	[more]
P82979	3.0e-04	39.47	SAP domain-containing ribonucleoprotein OS=Homo sapiens OX=9606 GN=SARNP PE=1 SV...	[more]
Q5R4V4	3.0e-04	39.47	SAP domain-containing ribonucleoprotein OS=Pongo abelii OX=9601 GN=SARNP PE=2 SV...	[more]

BLAST of CSPI04G14090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0R4	4.0e-100	100.00	Tho1_MOS11_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G29307...	[more]
A0A5A7TZD8	5.4e-97	97.55	Protein MODIFIER OF SNC1 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BHQ8	5.4e-97	97.55	protein MODIFIER OF SNC1 11-like OS=Cucumis melo OX=3656 GN=LOC103489757 PE=4 SV...	[more]
A0A6J1GD78	1.9e-86	89.22	protein MODIFIER OF SNC1 11-like OS=Cucurbita moschata OX=3662 GN=LOC111453127 P...	[more]
A0A6J1IR28	1.8e-84	88.24	protein MODIFIER OF SNC1 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477977 PE=...	[more]

BLAST of CSPI04G14090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740008.1	8.2e-100	100.00	protein MODIFIER OF SNC1 11 [Cucumis sativus] >KGN54197.1 hypothetical protein C...	[more]
XP_008447291.1	1.1e-96	97.55	PREDICTED: protein MODIFIER OF SNC1 11-like [Cucumis melo] >KAA0047316.1 protein...	[more]
XP_038882639.1	4.2e-88	91.67	protein MODIFIER OF SNC1 11 [Benincasa hispida]	[more]
XP_022949856.1	4.0e-86	89.22	protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949857.1 protein MO...	[more]
XP_022977777.1	3.7e-84	88.24	protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977778.1 protein MODI...	[more]

BLAST of CSPI04G14090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02770.1	5.8e-27	50.60	unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040746	THO1_MOS11, C-terminal domain	PFAM	PF18592	Tho1_MOS11_C	coord: 74..105 e-value: 3.8E-11 score: 42.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..102
IPR044209	Protein MODIFIER OF SNC1 11	PANTHER	PTHR47701	PROTEIN MODIFIER OF SNC1 11	coord: 18..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G14090.1	CSPI04G14090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
cellular_component	GO:0005634	nucleus