CSPI04G14000 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G14000
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	60S ribosomal protein L4-like
Location	Chr4: 11884998 .. 11887192 (-)
RNA-Seq Expression	CSPI04G14000
Synteny	CSPI04G14000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCTTATATTCACATATATATATATATAAACACGAAGCCTCAAAACCCTAATTCTTTCGCTTCGTTTTCCCCCTCTGTTCTGCACTTCACACACAATCACTCTCCAATGGCCGCTGCCGCCCGCCCCTTGGTCTCCGTCCAGTCCCTTGAAGGGGACATGGCTACCGATGCAGCGCCCACCGTCCCGCTTCCGGACGTCATGAAGGCTTCAATTCGTCCGGACATTGTTAGCTTTGTCCATTCCAATATCTCCAAAAACAGCCGTCAGCCTTACGCCGTCAGCAAGCGCGCCGGTCATCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCACGTGTTCCTGGTGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCGACTAAGATCTGGCGCCGTTGGCACCGTAAGATCAATGTGAACCAGAAGAGGTATGCTGTTGTTTCGGCCATCGCTGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGTGGTCATCGAATTGAAACTGTCCCTGAATTGCCCCTTGTTGTGAGTGACTCGGCTGAAGGTGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTTAAACAGGTTGGGGCGTTTCCTGATGCTGAGAAGGCTAAAGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAATCGTCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAACATTCCTGGTGTTGAGATTGCTAACGTTGAGAGGCTTAATTTGTTGAAGCTTGCTCCTGGTGGGCATCTTGGGAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGTCTTCAGAGAAGAAGAAGGGTTATGTCCTTCCTAGGTCTAAGATGGTGAATGCTGATTTGTCAAGGATTATTAACTCTGATGAAGTTCAATCTGTTGTGAAGCCGATTAAGAAGAATGTTAAGAGACCTCAATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCTAAAACTGCTAGAAGAATGGCTCTTTTGGCAGAGGAGCAACGTGTTAAGGCGAAAAAGGAGAAACTCGACAAGAAGAGGAATTTAACTACAAAGGTATACTTTTTTGCGTTCTTTGTGAGATCATTTGGATACTGCTCGTCGATTGTTATTTACATTCTTTTGGAAATCAAGTATTGAATATGTTCGTCTTAGATTGACTTGCCTTCAAGTACTTCTAATTATTTGTTTCTTTTGGTGTTGGTTTTCGTTATTTGTTATAGAATGATTTGTAATCAAAATGTTGATTATAGTTTGAATTATGAGATGCTTATATGCTAAAACTGACGAGATGGGTTGGATTCTCCATCACTTTTTTTTTTGTGTGCTTGCCTCAGTCTTTTTAGTACTAGTAATTTACCATAACCCATTAGTCTAATCTTTTTGGTCGATTGATGATTTACTGTTTGTTTTATCTTCTCGAGGATGTTTTTTCCTTCAAAATTTGTGTACTCTGTATTTCTCTTTTCAAACCAAAATCATGGATACCTGTGACCACAAGTTGTGTTTAATAAGGTGGTACAATTGTTCATATTAACTGCATTTTGTTATTATAGAACATCCTAACCTCGGTGTTGATTTTCTTTTCCCCCTTTTGTACATGAACTCACAGGAGGATGCAACTGCTATCAGAGCCGCAGGAAAGGCTTGGTATCAGACGATGATCTCAGACAGCGATTACACAGAGTTTGAGAACTTCTCAAAATGGCTTGGTGTTTCCCAGTAATTTCGTTTTTCTTTATTGAAAATCTCATAGACCTTAATTACTTTTGTTAATCTATTTTGCCAAGGAGTTGTTATTCTTGCTTTTGATTGTTATTGCGTTTATGAAGGGAAGTAGTTTGGGAGAACAAAGAGTGAAATAACATAGATAATTAACTTTTGCCGTTTTGCTCTCCCGTTTTTCTCTAGATTGCTTCTCTTTGTTAGTTAAACCGAAATTACAAATGAGTGCAGCCTTATATCATTTCTTCCTTATGATGTTATATGCACTGTGATATGCTTATCTTCTGTTTTTCAATGGCATATTAATTTTCCGG

mRNA sequence

AACCCTTATATTCACATATATATATATATAAACACGAAGCCTCAAAACCCTAATTCTTTCGCTTCGTTTTCCCCCTCTGTTCTGCACTTCACACACAATCACTCTCCAATGGCCGCTGCCGCCCGCCCCTTGGTCTCCGTCCAGTCCCTTGAAGGGGACATGGCTACCGATGCAGCGCCCACCGTCCCGCTTCCGGACGTCATGAAGGCTTCAATTCGTCCGGACATTGTTAGCTTTGTCCATTCCAATATCTCCAAAAACAGCCGTCAGCCTTACGCCGTCAGCAAGCGCGCCGGTCATCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCACGTGTTCCTGGTGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCGACTAAGATCTGGCGCCGTTGGCACCGTAAGATCAATGTGAACCAGAAGAGGTATGCTGTTGTTTCGGCCATCGCTGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGTGGTCATCGAATTGAAACTGTCCCTGAATTGCCCCTTGTTGTGAGTGACTCGGCTGAAGGTGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTTAAACAGGTTGGGGCGTTTCCTGATGCTGAGAAGGCTAAAGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAATCGTCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAACATTCCTGGTGTTGAGATTGCTAACGTTGAGAGGCTTAATTTGTTGAAGCTTGCTCCTGGTGGGCATCTTGGGAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGTCTTCAGAGAAGAAGAAGGGTTATGTCCTTCCTAGGTCTAAGATGGTGAATGCTGATTTGTCAAGGATTATTAACTCTGATGAAGTTCAATCTGTTGTGAAGCCGATTAAGAAGAATGTTAAGAGACCTCAATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCTAAAACTGCTAGAAGAATGGCTCTTTTGGCAGAGGAGCAACGTGTTAAGGCGAAAAAGGAGAAACTCGACAAGAAGAGGAATTTAACTACAAAGGAGGATGCAACTGCTATCAGAGCCGCAGGAAAGGCTTGGTATCAGACGATGATCTCAGACAGCGATTACACAGAGTTTGAGAACTTCTCAAAATGGCTTGGTGTTTCCCAGTAATTTCGTTTTTCTTTATTGAAAATCTCATAGACCTTAATTACTTTTGTTAATCTATTTTGCCAAGGAGTTGTTATTCTTGCTTTTGATTGTTATTGCGTTTATGAAGGGAAGTAGTTTGGGAGAACAAAGAGTGAAATAACATAGATAATTAACTTTTGCCGTTTTGCTCTCCCGTTTTTCTCTAGATTGCTTCTCTTTGTTAGTTAAACCGAAATTACAAATGAGTGCAGCCTTATATCATTTCTTCCTTATGATGTTATATGCACTGTGATATGCTTATCTTCTGTTTTTCAATGGCATATTAATTTTCCGG

Coding sequence (CDS)

ATGGCCGCTGCCGCCCGCCCCTTGGTCTCCGTCCAGTCCCTTGAAGGGGACATGGCTACCGATGCAGCGCCCACCGTCCCGCTTCCGGACGTCATGAAGGCTTCAATTCGTCCGGACATTGTTAGCTTTGTCCATTCCAATATCTCCAAAAACAGCCGTCAGCCTTACGCCGTCAGCAAGCGCGCCGGTCATCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCACGTGTTCCTGGTGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCGACTAAGATCTGGCGCCGTTGGCACCGTAAGATCAATGTGAACCAGAAGAGGTATGCTGTTGTTTCGGCCATCGCTGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGTGGTCATCGAATTGAAACTGTCCCTGAATTGCCCCTTGTTGTGAGTGACTCGGCTGAAGGTGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTTAAACAGGTTGGGGCGTTTCCTGATGCTGAGAAGGCTAAAGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAATCGTCGTTATATTTCTCGCAAGGGTCCATTGATTGTTTACGGAACTGAGGGTGCTAAGCTTGTTAAGGCCTTCCGTAACATTCCTGGTGTTGAGATTGCTAACGTTGAGAGGCTTAATTTGTTGAAGCTTGCTCCTGGTGGGCATCTTGGGAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTTGAGAAGTCTTCAGAGAAGAAGAAGGGTTATGTCCTTCCTAGGTCTAAGATGGTGAATGCTGATTTGTCAAGGATTATTAACTCTGATGAAGTTCAATCTGTTGTGAAGCCGATTAAGAAGAATGTTAAGAGACCTCAATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCATATGCTAAAACTGCTAGAAGAATGGCTCTTTTGGCAGAGGAGCAACGTGTTAAGGCGAAAAAGGAGAAACTCGACAAGAAGAGGAATTTAACTACAAAGGAGGATGCAACTGCTATCAGAGCCGCAGGAAAGGCTTGGTATCAGACGATGATCTCAGACAGCGATTACACAGAGTTTGAGAACTTCTCAAAATGGCTTGGTGTTTCCCAGTAA

Protein sequence

MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ*

Homology

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BLAST of CSPI04G14000 vs. ExPASy Swiss-Prot
Match: Q9XF97 (60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 4.9e-200
Identity = 357/404 (88.37%), Postives = 383/404 (94.80%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV+VQSLEGDMATD   TV LPDVMKASIRPDIV+FVHSNISKNSRQPYAVSK+
Sbjct: 5   AAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSKK 64

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 65  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 124

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           NQKRYAVVSAIAASAVPSLVLARGH+IETVPELPLVVSDS EGVE+TSAA+KVLKQ+GA+
Sbjct: 125 NQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGAY 184

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAKDSH+IRPGKGKMRNRRYI+RKGPLIVYGTEGAKLVKAFRNIPG++I NVERLN
Sbjct: 185 SDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERLN 244

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFV+WTKSAFEKLDSIYGSF+K SEKK GYVLPRSKMVNADL+RIINSD
Sbjct: 245 LLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINSD 304

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PI++  KR  LKKNPL+ LN MLKLNPYAKTARRM+LLAE +RVKAKKEKLDK
Sbjct: 305 EVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLDK 364

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   +KE+A+ I+AAGKAWYQTMISDSDYTEF+NF+KWLGVSQ
Sbjct: 365 KRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408

[Close]

BLAST of CSPI04G14000 vs. ExPASy Swiss-Prot
Match: Q9SF40 (60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 4.2e-191
Identity = 335/404 (82.92%), Postives = 376/404 (93.07%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV++Q+L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           E+QSVV PIKK+ KR  LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   TKE+A AI+AAGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 363 KRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of CSPI04G14000 vs. ExPASy Swiss-Prot
Match: P49691 (60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2)

HSP 1 Score: 666.0 bits (1717), Expect = 2.7e-190
Identity = 335/404 (82.92%), Postives = 373/404 (92.33%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV+VQ L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PIK   KR  LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR + TKE+A AI+AAGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 364 KRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of CSPI04G14000 vs. ExPASy Swiss-Prot
Match: P08429 (60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2)

HSP 1 Score: 438.7 bits (1127), Expect = 7.0e-122
Identity = 221/358 (61.73%), Postives = 280/358 (78.21%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           A ARPL+SV S +G+    +   V +P V +A IRPDIV+FVH+N+ KN+RQPYAVSK A
Sbjct: 6   ACARPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 65

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 66  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 125

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182
           QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++ A+ 
Sbjct: 126 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 185

Query: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           D +K   S  +R GKGKMRNRR I R+GP ++Y  E   LVKAFRNIPG+ + NV +LNL
Sbjct: 186 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGLVKAFRNIPGITLLNVSKLNL 245

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDE 302
           L+LAPGGH+GRF IWT+SAF KLD +YG++ KS++ K  Y LP  KM N DL+RI+ S E
Sbjct: 246 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 305

Query: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 361
           +Q  ++   K VKR +LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K D
Sbjct: 306 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPD 359

[Close]

BLAST of CSPI04G14000 vs. ExPASy Swiss-Prot
Match: P02385 (60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2)

HSP 1 Score: 438.3 bits (1126), Expect = 9.2e-122
Identity = 220/358 (61.45%), Postives = 280/358 (78.21%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           A ARPL+SV S +G+    +   V +P V KA IRPDIV+FVH+N+ KN+RQPYAVSK A
Sbjct: 6   ACARPLISVYSEKGE---TSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 65

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 66  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 125

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182
           QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++ A+ 
Sbjct: 126 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 185

Query: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           D +K   S  +R GKGKMRNRR I R+GP ++Y  E   ++KAFRNIPG+ + NV +LNL
Sbjct: 186 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGIIKAFRNIPGITLLNVSKLNL 245

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDE 302
           L+LAPGGH+GRF IWT+SAF KLD +YG++ KS++ K  Y LP  KM N DL+RI+ S E
Sbjct: 246 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 305

Query: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 361
           +Q  ++   K VKR +LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K D
Sbjct: 306 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPD 359

[Close]

BLAST of CSPI04G14000 vs. ExPASy TrEMBL
Match: A0A0A0L0Q4 (Ribos_L4_asso_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G292970 PE=3 SV=1)

HSP 1 Score: 778.9 bits (2010), Expect = 1.1e-221
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CSPI04G14000 vs. ExPASy TrEMBL
Match: A0A5A7TZA0 (60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00800 PE=3 SV=1)

HSP 1 Score: 773.5 bits (1996), Expect = 4.5e-220
Identity = 402/405 (99.26%), Postives = 403/405 (99.51%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEK SEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CSPI04G14000 vs. ExPASy TrEMBL
Match: A0A1S3BL28 (60S ribosomal protein L4-like OS=Cucumis melo OX=3656 GN=LOC103491208 PE=3 SV=1)

HSP 1 Score: 773.5 bits (1996), Expect = 4.5e-220
Identity = 402/405 (99.26%), Postives = 403/405 (99.51%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEK SEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CSPI04G14000 vs. ExPASy TrEMBL
Match: A0A6J1EDI0 (60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1)

HSP 1 Score: 758.8 bits (1958), Expect = 1.1e-215
Identity = 393/405 (97.04%), Postives = 399/405 (98.52%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDA PTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLVVSDSAEGVEKTSAA+KVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEK SEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKE+AT I++AGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CSPI04G14000 vs. ExPASy TrEMBL
Match: A0A6J1I983 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 7.4e-215
Identity = 393/403 (97.52%), Postives = 398/403 (98.76%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           AAARPLVSVQSLEGDMATDAAP VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 63

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182
           QKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183

Query: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDE 302
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEK SEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303

Query: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362
           VQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363

Query: 363 RNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           RNLTTKE+AT+I+AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 364 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of CSPI04G14000 vs. NCBI nr
Match: XP_004142108.1 (60S ribosomal protein L4 [Cucumis sativus] >KGN54187.1 hypothetical protein Csa_018176 [Cucumis sativus])

HSP 1 Score: 778.9 bits (2010), Expect = 2.2e-221
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CSPI04G14000 vs. NCBI nr
Match: XP_008449286.1 (PREDICTED: 60S ribosomal protein L4-like [Cucumis melo] >KAA0047286.1 60S ribosomal protein L4-like [Cucumis melo var. makuwa])

HSP 1 Score: 773.5 bits (1996), Expect = 9.2e-220
Identity = 402/405 (99.26%), Postives = 403/405 (99.51%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEK SEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CSPI04G14000 vs. NCBI nr
Match: XP_038882700.1 (60S ribosomal protein L4 [Benincasa hispida])

HSP 1 Score: 770.8 bits (1989), Expect = 6.0e-219
Identity = 400/405 (98.77%), Postives = 403/405 (99.51%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLVVSDSAEGVEKTSAAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEK SEKKKGYVLPRSKM+NADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMMNADLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKKNVKRP LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKNVKRPSLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKE+ATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CSPI04G14000 vs. NCBI nr
Match: XP_022925909.1 (60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo] >KAG6604443.1 60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034587.1 60S ribosomal protein L4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 758.8 bits (1958), Expect = 2.3e-215
Identity = 393/405 (97.04%), Postives = 399/405 (98.52%), Query Frame = 0


Query: 1   MAAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVSVQSLEGDMATDA PTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 180
           VNQKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLVVSDSAEGVEKTSAA+KVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGA 180

Query: 181 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240
           FPDAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL
Sbjct: 181 FPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINS 300
           NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEK SEKKKGYVLPRSKMVNADLSRIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360
           DEVQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 360

Query: 361 KKRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KKRNLTTKE+AT I++AGKAWYQTMISDSDYTEFENFSKWLGVSQ
Sbjct: 361 KKRNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CSPI04G14000 vs. NCBI nr
Match: XP_022972645.1 (60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 756.1 bits (1951), Expect = 1.5e-214
Identity = 393/403 (97.52%), Postives = 398/403 (98.76%), Query Frame = 0


Query: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           AAARPLVSVQSLEGDMATDAAP VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 4   AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 63

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 64  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 123

Query: 123 QKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182
           QKRYAVVSAIAASAVPSLVLARGHRIE+VPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 124 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 183

Query: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 243

Query: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDE 302
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEK SEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 303

Query: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362
           VQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 304 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 363

Query: 363 RNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           RNLTTKE+AT+I+AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 364 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of CSPI04G14000 vs. TAIR 10
Match: AT3G09630.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 668.7 bits (1724), Expect = 3.0e-192
Identity = 335/404 (82.92%), Postives = 376/404 (93.07%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV++Q+L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           E+QSVV PIKK+ KR  LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   TKE+A AI+AAGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 363 KRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of CSPI04G14000 vs. TAIR 10
Match: AT5G02870.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 666.0 bits (1717), Expect = 1.9e-191
Identity = 335/404 (82.92%), Postives = 373/404 (92.33%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV+VQ L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PIK   KR  LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR + TKE+A AI+AAGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 364 KRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of CSPI04G14000 vs. TAIR 10
Match: AT3G09630.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 663.3 bits (1710), Expect = 1.2e-190
Identity = 335/404 (82.92%), Postives = 375/404 (92.82%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV++Q+L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           E+QSVV PIKK+ KR  LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR   TKE A AI+AAGK+WY+TMISDSDYTEF+NF+KWLG SQ
Sbjct: 363 KRKTVTKE-ALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 405

[Close]

BLAST of CSPI04G14000 vs. TAIR 10
Match: AT5G02870.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 660.6 bits (1703), Expect = 8.1e-190
Identity = 335/404 (82.92%), Postives = 372/404 (92.08%), Query Frame = 0


Query: 2   AAAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV+VQ L+GDM+TD + TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAVPSLVLARGHRIETVPELPLVVSDSAEGVEKTSAAIKVLKQVGAF 181
           N KR+A+VSAIAA+AVP+LV+ARGH+IE VPE+PLVVSDSAE VEKTSAAIKVLKQ+GA+
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLN 241
            DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSD 301
           LLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDK 361
           EVQSVV PIK   KR  LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406
           KR + TKE A AI+AAGKAWYQTMISDSDYTEF+NF+KWLG SQ
Sbjct: 364 KRKVVTKE-AQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 406

The following BLAST results are available for this feature:

BLAST of CSPI04G14000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF97	4.9e-200	88.37	60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1	[more]
Q9SF40	4.2e-191	82.92	60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1	[more]
P49691	2.7e-190	82.92	60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2	[more]
P08429	7.0e-122	61.73	60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2	[more]
P02385	9.2e-122	61.45	60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2	[more]

BLAST of CSPI04G14000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0Q4	1.1e-221	100.00	Ribos_L4_asso_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G29...	[more]
A0A5A7TZA0	4.5e-220	99.26	60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BL28	4.5e-220	99.26	60S ribosomal protein L4-like OS=Cucumis melo OX=3656 GN=LOC103491208 PE=3 SV=1	[more]
A0A6J1EDI0	1.1e-215	97.04	60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1	[more]
A0A6J1I983	7.4e-215	97.52	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 S...	[more]

BLAST of CSPI04G14000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142108.1	2.2e-221	100.00	60S ribosomal protein L4 [Cucumis sativus] >KGN54187.1 hypothetical protein Csa_...	[more]
XP_008449286.1	9.2e-220	99.26	PREDICTED: 60S ribosomal protein L4-like [Cucumis melo] >KAA0047286.1 60S riboso...	[more]
XP_038882700.1	6.0e-219	98.77	60S ribosomal protein L4 [Benincasa hispida]	[more]
XP_022925909.1	2.3e-215	97.04	60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal prot...	[more]
XP_022972645.1	1.5e-214	97.52	60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal p...	[more]

BLAST of CSPI04G14000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09630.1	3.0e-192	82.92	Ribosomal protein L4/L1 family	[more]
AT5G02870.1	1.9e-191	82.92	Ribosomal protein L4/L1 family	[more]
AT3G09630.2	1.2e-190	82.92	Ribosomal protein L4/L1 family	[more]
AT5G02870.2	8.1e-190	82.92	Ribosomal protein L4/L1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 345..365
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	PANTHER	PTHR19431	60S RIBOSOMAL PROTEIN L4	coord: 2..405
None	No IPR available	PANTHER	PTHR19431:SF6	BNAC03G35890D PROTEIN	coord: 2..405
IPR025755	60S ribosomal protein L4, C-terminal domain	PFAM	PF14374	Ribos_L4_asso_C	coord: 280..352 e-value: 1.4E-28 score: 98.7
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 26..266 e-value: 2.9E-40 score: 138.0
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 3..308 e-value: 6.1E-143 score: 477.4
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 10..267
IPR013000	Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site	PROSITE	PS00939	RIBOSOMAL_L1E	coord: 120..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G14000.1	CSPI04G14000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome