CSPI04G13700 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G13700
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	Chr4: 11657093 .. 11657680 (+)
RNA-Seq Expression	CSPI04G13700
Synteny	CSPI04G13700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAGCAGATTTTGTGTTATCTAAAAGTTGCTCCTCGACGTGGGATCCTATACAGAGATCATGGACATACGAGAATTGAATGTTTTTCTAATGCTGATTGGACGGGGTCTCGTGAGGATAGGAGATCAACTTCTGGATATTGTGTTTTTGTAGGTGGAAACTTAGTTTCATGGAAGAGTAAGAAACAAAATGTTGTTTCTCGTTCGAGTGCTGAGTCAGAATATAGAGCTATGGCACAATCTGTGTGTGAAATAGTATGGATTCACCAACTATTATCTGAGATAGGCTTCAGTATTACCGTGCCAGCTAAATTATGGTGTGATAATCAAGTTGCACTTCATATTGCATCTAATCCAGTATTTCATGAACGAACTAAACATATTGAGGTGGATTGTCACTTCATTCGTGAGAAAATCCAAGATGGGTTGGTGTCCACAGGATATGTGAAGACCGGAGAACAATTGGGAGATATTCTAACTAAAGCTTTAAATGGAACAAGGATAAGCTATCTGTGCAACAAGCTGGGCATGATCGACATATTTGCTCCAGCTTGA

mRNA sequence

ATGTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAGCAGATTTTGTGTTATCTAAAAGTTGCTCCTCGACGTGGGATCCTATACAGAGATCATGGACATACGAGAATTGAATGTTTTTCTAATGCTGATTGGACGGGGTCTCGTGAGGATAGGAGATCAACTTCTGGATATTGTGTTTTTGTAGGTGGAAACTTAGTTTCATGGAAGAGTAAGAAACAAAATGTTGTTTCTCGTTCGAGTGCTGAGTCAGAATATAGAGCTATGGCACAATCTGTGTGTGAAATAGTATGGATTCACCAACTATTATCTGAGATAGGCTTCAGTATTACCGTGCCAGCTAAATTATGGTGTGATAATCAAGTTGCACTTCATATTGCATCTAATCCAGTATTTCATGAACGAACTAAACATATTGAGGTGGATTGTCACTTCATTCGTGAGAAAATCCAAGATGGGTTGGTGTCCACAGGATATGTGAAGACCGGAGAACAATTGGGAGATATTCTAACTAAAGCTTTAAATGGAACAAGGATAAGCTATCTGTGCAACAAGCTGGGCATGATCGACATATTTGCTCCAGCTTGA

Coding sequence (CDS)

ATGTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAGCAGATTTTGTGTTATCTAAAAGTTGCTCCTCGACGTGGGATCCTATACAGAGATCATGGACATACGAGAATTGAATGTTTTTCTAATGCTGATTGGACGGGGTCTCGTGAGGATAGGAGATCAACTTCTGGATATTGTGTTTTTGTAGGTGGAAACTTAGTTTCATGGAAGAGTAAGAAACAAAATGTTGTTTCTCGTTCGAGTGCTGAGTCAGAATATAGAGCTATGGCACAATCTGTGTGTGAAATAGTATGGATTCACCAACTATTATCTGAGATAGGCTTCAGTATTACCGTGCCAGCTAAATTATGGTGTGATAATCAAGTTGCACTTCATATTGCATCTAATCCAGTATTTCATGAACGAACTAAACATATTGAGGTGGATTGTCACTTCATTCGTGAGAAAATCCAAGATGGGTTGGTGTCCACAGGATATGTGAAGACCGGAGAACAATTGGGAGATATTCTAACTAAAGCTTTAAATGGAACAAGGATAAGCTATCTGTGCAACAAGCTGGGCATGATCGACATATTTGCTCCAGCTTGA

Protein sequence

MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDNQVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRISYLCNKLGMIDIFAPA*

Homology

[Close]

BLAST of CSPI04G13700 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.0e-42
Identity = 80/191 (41.88%), Postives = 118/191 (61.78%), Query Frame = 0


Query: 1    MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
            M  PT DHW A++++L YL   P  GI  +      +  +S+ADW G  +D  ST+GY V
Sbjct: 1256 MHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIV 1315

Query: 61   FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 120
            ++G + +SW SKKQ  V RSS E+EYR++A +  E+ WI  LL+E+G  ++ P  ++CDN
Sbjct: 1316 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDN 1375

Query: 121  QVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 180
              A ++ +NPVFH R KHI +D HFIR ++Q G +   +V T +QL D LTK L+     
Sbjct: 1376 VGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQ 1435

Query: 181  YLCNKLGMIDI 192
                K+G+I +
Sbjct: 1436 NFSRKIGVIKV 1446

[Close]

BLAST of CSPI04G13700 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.9e-42
Identity = 80/188 (42.55%), Postives = 118/188 (62.77%), Query Frame = 0


Query: 1    MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
            M  PT +H  A+++IL YL   P  GI  +      +  +S+ADW G ++D  ST+GY V
Sbjct: 1273 MHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIV 1332

Query: 61   FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 120
            ++G + +SW SKKQ  V RSS E+EYR++A +  E+ WI  LL+E+G  +T P  ++CDN
Sbjct: 1333 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDN 1392

Query: 121  QVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 180
              A ++ +NPVFH R KHI +D HFIR ++Q G +   +V T +QL D LTK L+ T   
Sbjct: 1393 VGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQ 1452

Query: 181  YLCNKLGM 189
               +K+G+
Sbjct: 1453 NFASKIGV 1460

[Close]

BLAST of CSPI04G13700 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 136.7 bits (343), Expect = 2.8e-31
Identity = 68/184 (36.96%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 9    WAAVEQILCYLKVAPRRGILYRDH--GHTRIECFSNADWTGSREDRRSTSGYCV-FVGGN 68
            W  ++++L YLK      ++++ +     +I  + ++DW GS  DR+ST+GY       N
Sbjct: 1218 WQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFN 1277

Query: 69   LVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDNQVALH 128
            L+ W +K+QN V+ SS E+EY A+ ++V E +W+  LL+ I   +  P K++ DNQ  + 
Sbjct: 1278 LICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCIS 1337

Query: 129  IASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRISYLCNK 188
            IA+NP  H+R KHI++  HF RE++Q+ ++   Y+ T  QL DI TK L   R   L +K
Sbjct: 1338 IANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDK 1397

Query: 189  LGMI 190
            LG++
Sbjct: 1398 LGLL 1401

[Close]

BLAST of CSPI04G13700 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-24
Identity = 60/186 (32.26%), Postives = 104/186 (55.91%), Query Frame = 0


Query: 1    MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
            + +P  +HW AV+ IL YL+       L        ++ +++AD  G  ++R+S++GY  
Sbjct: 1140 LENPGKEHWEAVKWILRYLR-GTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLF 1199

Query: 61   FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 120
               G  +SW+SK Q  V+ S+ E+EY A  ++  E++W+ + L E+G        ++CD+
Sbjct: 1200 TFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLH-QKEYVVYCDS 1259

Query: 121  QVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 180
            Q A+ ++ N ++H RTKHI+V  H+IRE + D  +    + T E   D+LTK +   +  
Sbjct: 1260 QSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFE 1319

Query: 181  YLCNKL 187
             LC +L
Sbjct: 1320 -LCKEL 1322

[Close]

BLAST of CSPI04G13700 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.1e-17
Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 2   SSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCVF 61
           S P   HW A++++L YL+     G+ +   G  ++  +S+ADW G  E RRSTSGY   
Sbjct: 36  SDPCPTHWQALKRVLRYLQSTQTYGLEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFK 95

Query: 62  VGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWI 100
           + G  VSW+SKKQ  V+ SS E EY A++++  E VW+
Sbjct: 96  LNGGCVSWRSKKQRTVALSSTEDEYMALSEATQEAVWL 133

[Close]

BLAST of CSPI04G13700 vs. ExPASy TrEMBL
Match: A0A5A7UHS1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00150 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 7.9e-98
Identity = 173/195 (88.72%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
           MS PTVDHWAAVEQILCYLK A  RGILY+DHGHT+++CFS+ADW GSREDRRS SGYCV
Sbjct: 473 MSFPTVDHWAAVEQILCYLKAASGRGILYKDHGHTKVKCFSDADWVGSREDRRSISGYCV 532

Query: 61  FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 120
           FVGGNLVSWKSKKQNVVS SSA+SEYRAMAQSVCEIVWIHQLLSEIGFSITVP KLWCDN
Sbjct: 533 FVGGNLVSWKSKKQNVVSCSSAKSEYRAMAQSVCEIVWIHQLLSEIGFSITVPVKLWCDN 592

Query: 121 QVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 180
           QVALHIASNPVFHE+TKHIEVDCHFIREKIQDGL+STGYVKTGEQLGDILTK +NG RIS
Sbjct: 593 QVALHIASNPVFHEQTKHIEVDCHFIREKIQDGLMSTGYVKTGEQLGDILTKDVNGARIS 652

Query: 181 YLCNKLGMIDIFAPA 196
           YL  KL MIDIFAPA
Sbjct: 653 YLYKKLDMIDIFAPA 667

[Close]

BLAST of CSPI04G13700 vs. ExPASy TrEMBL
Match: A0A5D3DZU1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2277G00150 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 7.9e-98
Identity = 173/195 (88.72%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
           MS PTVDHWAAVEQILCYLK A  RGILY+DHGHT+++CFS+ADW GSREDRRS SGYCV
Sbjct: 473 MSFPTVDHWAAVEQILCYLKAASGRGILYKDHGHTKVKCFSDADWVGSREDRRSISGYCV 532

Query: 61  FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 120
           FVGGNLVSWKSKKQNVVS SSA+SEYRAMAQSVCEIVWIHQLLSEIGFSITVP KLWCDN
Sbjct: 533 FVGGNLVSWKSKKQNVVSCSSAKSEYRAMAQSVCEIVWIHQLLSEIGFSITVPVKLWCDN 592

Query: 121 QVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 180
           QVALHIASNPVFHE+TKHIEVDCHFIREKIQDGL+STGYVKTGEQLGDILTK +NG RIS
Sbjct: 593 QVALHIASNPVFHEQTKHIEVDCHFIREKIQDGLMSTGYVKTGEQLGDILTKDVNGARIS 652

Query: 181 YLCNKLGMIDIFAPA 196
           YL  KL MIDIFAPA
Sbjct: 653 YLYKKLDMIDIFAPA 667

[Close]

BLAST of CSPI04G13700 vs. ExPASy TrEMBL
Match: A0A6P6VCZ7 (uncharacterized protein LOC113719488 OS=Coffea arabica OX=13443 GN=LOC113719488 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.3e-95
Identity = 161/195 (82.56%), Postives = 181/195 (92.82%), Query Frame = 0


Query: 1   MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
           MSSPTVDHW AVEQ+L YLK AP RGILY +HGHTRIECFS++DW G +EDRRSTSGYCV
Sbjct: 147 MSSPTVDHWKAVEQVLHYLKCAPGRGILYGNHGHTRIECFSDSDWAGCKEDRRSTSGYCV 206

Query: 61  FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 120
           FVGGNLVSWKSKKQNVVSRSSAE+EYRAMA+SVCE++W++QLLSE+G  ++VPAKLWCDN
Sbjct: 207 FVGGNLVSWKSKKQNVVSRSSAEAEYRAMAKSVCEVIWVYQLLSEVGIKVSVPAKLWCDN 266

Query: 121 QVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 180
           Q ALHIASNPVFHERTKHIE+DCHF+REKIQ GL++TGYVKTGEQLGDI TKALNG RI 
Sbjct: 267 QAALHIASNPVFHERTKHIEIDCHFVREKIQQGLITTGYVKTGEQLGDIFTKALNGVRID 326

Query: 181 YLCNKLGMIDIFAPA 196
           YLCNKLGMI+I+APA
Sbjct: 327 YLCNKLGMINIYAPA 341

[Close]

BLAST of CSPI04G13700 vs. ExPASy TrEMBL
Match: A0A5A7T406 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00610 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 166/190 (87.37%), Postives = 177/190 (93.16%), Query Frame = 0


Query: 6   VDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCVFVGGN 65
           VDHWA VEQILCY K AP RGILYRDHG+TR+ECFS+ADW GSR+D+RSTSGYCVFVG N
Sbjct: 519 VDHWAVVEQILCYSKAAPGRGILYRDHGYTRVECFSDADWAGSRKDKRSTSGYCVFVGEN 578

Query: 66  LVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDNQVALH 125
           LV WKSKKQNV+SRSSAESEYRAM QSVC IVWIHQLLSE  FSITVPAKLWCDNQVALH
Sbjct: 579 LVPWKSKKQNVISRSSAESEYRAMTQSVCAIVWIHQLLSETCFSITVPAKLWCDNQVALH 638

Query: 126 IASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRISYLCNK 185
           IASNPVFHE+TK++EVDCHFIREKIQDGLVSTGYVKTGE+LGDILTKA+NG RISYLCNK
Sbjct: 639 IASNPVFHEQTKNVEVDCHFIREKIQDGLVSTGYVKTGEKLGDILTKAVNGARISYLCNK 698

Query: 186 LGMIDIFAPA 196
           L MIDIFAPA
Sbjct: 699 LDMIDIFAPA 708

[Close]

BLAST of CSPI04G13700 vs. ExPASy TrEMBL
Match: A0A5D3E5M8 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00270 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.4e-94
Identity = 165/190 (86.84%), Postives = 177/190 (93.16%), Query Frame = 0


Query: 6   VDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCVFVGGN 65
           VDHWA VEQILCY K AP RGILY+DHG+TR+ECFS+ADW GSR+D+RSTSGYCVFVG N
Sbjct: 638 VDHWAVVEQILCYSKAAPGRGILYKDHGYTRVECFSDADWAGSRKDKRSTSGYCVFVGEN 697

Query: 66  LVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDNQVALH 125
           LV WKSKKQNV+SRSSAESEYRAM QSVC IVWIHQLLSE  FSITVPAKLWCDNQVALH
Sbjct: 698 LVPWKSKKQNVISRSSAESEYRAMTQSVCAIVWIHQLLSETCFSITVPAKLWCDNQVALH 757

Query: 126 IASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRISYLCNK 185
           IASNPVFHE+TK++EVDCHFIREKIQDGLVSTGYVKTGE+LGDILTKA+NG RISYLCNK
Sbjct: 758 IASNPVFHEQTKNVEVDCHFIREKIQDGLVSTGYVKTGEKLGDILTKAVNGARISYLCNK 817

Query: 186 LGMIDIFAPA 196
           L MIDIFAPA
Sbjct: 818 LDMIDIFAPA 827

[Close]

BLAST of CSPI04G13700 vs. NCBI nr
Match: XP_031744754.1 (uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 3.0e-107
Identity = 188/195 (96.41%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 1    MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
            MSSPTVDHWAAVEQILCYLK AP RGILY+DHGHTR+ECFS+ADW GSREDRRSTSGYCV
Sbjct: 1153 MSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDRRSTSGYCV 1212

Query: 61   FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 120
            FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN
Sbjct: 1213 FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 1272

Query: 121  QVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 180
            Q ALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS
Sbjct: 1273 QAALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 1332

Query: 181  YLCNKLGMIDIFAPA 196
            YLCNKLGMIDIFAPA
Sbjct: 1333 YLCNKLGMIDIFAPA 1347

[Close]

BLAST of CSPI04G13700 vs. NCBI nr
Match: XP_031744758.1 (uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 3.0e-107
Identity = 188/195 (96.41%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 1   MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
           MSSPTVDHWAAVEQILCYLK AP RGILY+DHGHTR+ECFS+ADW GSREDRRSTSGYCV
Sbjct: 776 MSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDRRSTSGYCV 835

Query: 61  FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 120
           FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN
Sbjct: 836 FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 895

Query: 121 QVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 180
           Q ALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS
Sbjct: 896 QAALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 955

Query: 181 YLCNKLGMIDIFAPA 196
           YLCNKLGMIDIFAPA
Sbjct: 956 YLCNKLGMIDIFAPA 970

[Close]

BLAST of CSPI04G13700 vs. NCBI nr
Match: XP_031744753.1 (uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 3.0e-107
Identity = 188/195 (96.41%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 1    MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
            MSSPTVDHWAAVEQILCYLK AP RGILY+DHGHTR+ECFS+ADW GSREDRRSTSGYCV
Sbjct: 1168 MSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDRRSTSGYCV 1227

Query: 61   FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 120
            FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN
Sbjct: 1228 FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 1287

Query: 121  QVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 180
            Q ALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS
Sbjct: 1288 QAALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 1347

Query: 181  YLCNKLGMIDIFAPA 196
            YLCNKLGMIDIFAPA
Sbjct: 1348 YLCNKLGMIDIFAPA 1362

[Close]

BLAST of CSPI04G13700 vs. NCBI nr
Match: XP_031744755.1 (uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 3.0e-107
Identity = 188/195 (96.41%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 1    MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
            MSSPTVDHWAAVEQILCYLK AP RGILY+DHGHTR+ECFS+ADW GSREDRRSTSGYCV
Sbjct: 1120 MSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDRRSTSGYCV 1179

Query: 61   FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 120
            FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN
Sbjct: 1180 FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 1239

Query: 121  QVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 180
            Q ALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS
Sbjct: 1240 QAALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 1299

Query: 181  YLCNKLGMIDIFAPA 196
            YLCNKLGMIDIFAPA
Sbjct: 1300 YLCNKLGMIDIFAPA 1314

[Close]

BLAST of CSPI04G13700 vs. NCBI nr
Match: XP_031744756.1 (uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus] >XP_031744757.1 uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 3.0e-107
Identity = 188/195 (96.41%), Postives = 191/195 (97.95%), Query Frame = 0


Query: 1    MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
            MSSPTVDHWAAVEQILCYLK AP RGILY+DHGHTR+ECFS+ADW GSREDRRSTSGYCV
Sbjct: 982  MSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDRRSTSGYCV 1041

Query: 61   FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 120
            FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN
Sbjct: 1042 FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDN 1101

Query: 121  QVALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 180
            Q ALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS
Sbjct: 1102 QAALHIASNPVFHERTKHIEVDCHFIREKIQDGLVSTGYVKTGEQLGDILTKALNGTRIS 1161

Query: 181  YLCNKLGMIDIFAPA 196
            YLCNKLGMIDIFAPA
Sbjct: 1162 YLCNKLGMIDIFAPA 1176

[Close]

BLAST of CSPI04G13700 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 165.6 bits (418), Expect = 3.9e-41
Identity = 82/194 (42.27%), Postives = 125/194 (64.43%), Query Frame = 0


Query: 3   SPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCVFV 62
           +P + H  AV +IL Y+K    +G+ Y      +++ FS+A +   ++ RRST+GYC+F+
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467

Query: 63  GGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVWIHQLLSEIGFSITVPAKLWCDNQV 122
           G +L+SWKSKKQ VVS+SSAE+EYRA++ +  E++W+ Q   E+   ++ P  L+CDN  
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527

Query: 123 ALHIASNPVFHERTKHIEVDCHFIREK-IQDGLVSTGYVKTGEQLG--DILTKALNGTRI 182
           A+HIA+N VFHERTKHIE DCH +RE+ +    +S  +    EQ G  + L+  L GT I
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQDGFTEYLSPILRGT-I 587

Query: 183 SYLCNKLGMIDIFA 194
            Y+ +  G+  + A
Sbjct: 588 MYIVSMFGLAGLEA 600

[Close]

BLAST of CSPI04G13700 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 6.1e-18
Identity = 37/98 (37.76%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 1   MSSPTVDHWAAVEQILCYLKVAPRRGILYRDHGHTRIECFSNADWTGSREDRRSTSGYCV 60
           M  PT+  +  ++++L Y+K     G+    +    ++ F ++DW G    RRST+G+C 
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

Query: 61  FVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSVCEIVW 99
           F+G N++SW +K+Q  VSRSS E+EYRA+A +  E+ W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:

BLAST of CSPI04G13700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	2.0e-42	41.88	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	5.9e-42	42.55	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	2.8e-31	36.96	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	1.5e-24	32.26	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P0CV72	5.1e-17	41.84	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of CSPI04G13700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHS1	7.9e-98	88.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DZU1	7.9e-98	88.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A6P6VCZ7	1.3e-95	82.56	uncharacterized protein LOC113719488 OS=Coffea arabica OX=13443 GN=LOC113719488 ...	[more]
A0A5A7T406	1.1e-94	87.37	Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00610 ...	[more]
A0A5D3E5M8	2.4e-94	86.84	Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G0027...	[more]

BLAST of CSPI04G13700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744754.1	3.0e-107	96.41	uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]	[more]
XP_031744758.1	3.0e-107	96.41	uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]	[more]
XP_031744753.1	3.0e-107	96.41	uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]	[more]
XP_031744755.1	3.0e-107	96.41	uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus]	[more]
XP_031744756.1	3.0e-107	96.41	uncharacterized protein LOC101212255 isoform X4 [Cucumis sativus] >XP_031744757....	[more]

BLAST of CSPI04G13700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.9e-41	42.27	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	6.1e-18	37.76	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 66..188
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 66..188
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 38..176 e-value: 1.43185E-84 score: 244.3
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 5..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G13700.1	CSPI04G13700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0007165	signal transduction
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003953	NAD+ nucleosidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding