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CSPI04G13170 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAAAGTTGGAGTGGGAAAGAGAATGGCAAGGTACAACTACTACTACCGCTATCCTTACTTGGAGTACTTGACATTGCCTCCTTTGCAGCTTTGTGTGTTTGTTGTGATCCTTTTGGTGGTGATGGCCTTTTCATGGTACTTCTTCTACTATTCATTTCTTGAAGATTTTATCTTCCAACTCAAGCTCTTCCTTCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTCCACCTCCTCTCTTTCGGCTTCTCCTTTCTCCTCCCTTTACCCGAGCAGGACTCCCTCCATCGTGCTGGTGGCTCACCCTGGGGCGTCGCCATCCTCCTCGTCTTCTTTCTCTATGTTATCTCTCACCAGTCTCATTACCACCAACGTTGGTTTCCTTTCGGATATAGATAATGCTTATGTGATCGACGACGTACTAACTATTTGAATTGTAATTGAGTTGTACTAGATTACACTACTCTTTGGTTATTTTTGTATCATTTGTGTGTTGTCACTTGAATTGTTATGTTACAAATAACAACTTATTTGTTGTTTGTATCTATTGTAAGTTTGTTTTTGTGGAG GAGAAAGTTGGAGTGGGAAAGAGAATGGCAAGGTACAACTACTACTACCGCTATCCTTACTTGGAGTACTTGACATTGCCTCCTTTGCAGCTTTGTGTGTTTGTTGTGATCCTTTTGGTGGTGATGGCCTTTTCATGGTACTTCTTCTACTATTCATTTCTTGAAGATTTTATCTTCCAACTCAAGCTCTTCCTTCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTCCACCTCCTCTCTTTCGGCTTCTCCTTTCTCCTCCCTTTACCCGAGCAGGACTCCCTCCATCGTGCTGGTGGCTCACCCTGGGGCGTCGCCATCCTCCTCGTCTTCTTTCTCTATGTTATCTCTCACCAGTCTCATTACCACCAACGTTGGTTTCCTTTCGGATATAGATAATGCTTATGTGATCGACGACGTACTAACTATTTGAATTGTAATTGAGTTGTACTAGATTACACTACTCTTTGGTTATTTTTGTATCATTTGTGTGTTGTCACTTGAATTGTTATGTTACAAATAACAACTTATTTGTTGTTTGTATCTATTGTAAGTTTGTTTTTGTGGAG ATGGCAAGGTACAACTACTACTACCGCTATCCTTACTTGGAGTACTTGACATTGCCTCCTTTGCAGCTTTGTGTGTTTGTTGTGATCCTTTTGGTGGTGATGGCCTTTTCATGGTACTTCTTCTACTATTCATTTCTTGAAGATTTTATCTTCCAACTCAAGCTCTTCCTTCTCACTGTCCCCTTGCTTCTCCTCCTCCTCCTCCACCTCCTCTCTTTCGGCTTCTCCTTTCTCCTCCCTTTACCCGAGCAGGACTCCCTCCATCGTGCTGGTGGCTCACCCTGGGGCGTCGCCATCCTCCTCGTCTTCTTTCTCTATGTTATCTCTCACCAGTCTCATTACCACCAACGTTGGTTTCCTTTCGGATATAGATAA MARYNYYYRYPYLEYLTLPPLQLCVFVVILLVVMAFSWYFFYYSFLEDFIFQLKLFLLTVPLLLLLLLHLLSFGFSFLLPLPEQDSLHRAGGSPWGVAILLVFFLYVISHQSHYHQRWFPFGYR* Homology
BLAST of CSPI04G13170 vs. ExPASy TrEMBL
Match: A0A0A0KZ55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280660 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CSPI04G13170 vs. ExPASy TrEMBL
Match: A0A6P5ZU06 (uncharacterized protein LOC111304026 OS=Durio zibethinus OX=66656 GN=LOC111304026 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.4e-31 Identity = 74/114 (64.91%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of CSPI04G13170 vs. ExPASy TrEMBL
Match: A0A061GR99 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_040264 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 3.1e-31 Identity = 75/116 (64.66%), Postives = 89/116 (76.72%), Query Frame = 0
BLAST of CSPI04G13170 vs. ExPASy TrEMBL
Match: A0A6J0ZX76 (uncharacterized protein LOC110412707 OS=Herrania umbratica OX=108875 GN=LOC110412707 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 6.9e-31 Identity = 75/116 (64.66%), Postives = 90/116 (77.59%), Query Frame = 0
BLAST of CSPI04G13170 vs. ExPASy TrEMBL
Match: A0A5J5NVD3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A13G234100v1 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 5.9e-30 Identity = 72/116 (62.07%), Postives = 90/116 (77.59%), Query Frame = 0
BLAST of CSPI04G13170 vs. NCBI nr
Match: KAG6570356.1 (hypothetical protein SDJN03_29271, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010237.1 hypothetical protein SDJN02_27029, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.8 bits (530), Expect = 2.8e-50 Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0
BLAST of CSPI04G13170 vs. NCBI nr
Match: XP_022756288.1 (uncharacterized protein LOC111304026 [Durio zibethinus]) HSP 1 Score: 144.8 bits (364), Expect = 4.9e-31 Identity = 74/114 (64.91%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of CSPI04G13170 vs. NCBI nr
Match: XP_007014761.1 (PREDICTED: uncharacterized protein LOC18589643 [Theobroma cacao] >EOY32380.1 Uncharacterized protein TCM_040264 [Theobroma cacao]) HSP 1 Score: 144.4 bits (363), Expect = 6.4e-31 Identity = 75/116 (64.66%), Postives = 89/116 (76.72%), Query Frame = 0
BLAST of CSPI04G13170 vs. NCBI nr
Match: XP_021278994.1 (uncharacterized protein LOC110412707 [Herrania umbratica]) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30 Identity = 75/116 (64.66%), Postives = 90/116 (77.59%), Query Frame = 0
BLAST of CSPI04G13170 vs. NCBI nr
Match: XP_012462541.1 (PREDICTED: uncharacterized protein LOC105782384 [Gossypium raimondii] >XP_016734953.1 uncharacterized protein LOC107945445 [Gossypium hirsutum] >XP_017605397.1 PREDICTED: uncharacterized protein LOC108452152 [Gossypium arboreum] >XP_040941762.1 uncharacterized protein LOC121212647 [Gossypium hirsutum] >KAB1996691.1 hypothetical protein ES319_D13G249000v1 [Gossypium barbadense] >TYG38918.1 hypothetical protein ES288_D13G262800v1 [Gossypium darwinii] >TYH36452.1 hypothetical protein ES332_D13G265700v1 [Gossypium tomentosum] >KAB2050259.1 hypothetical protein ES319_A13G234100v1 [Gossypium barbadense] >KAG4113345.1 hypothetical protein ERO13_D13G217700v2 [Gossypium hirsutum]) HSP 1 Score: 140.2 bits (352), Expect = 1.2e-29 Identity = 72/116 (62.07%), Postives = 90/116 (77.59%), Query Frame = 0
BLAST of CSPI04G13170 vs. TAIR 10
Match: AT5G19875.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 115.9 bits (289), Expect = 2.3e-26 Identity = 59/116 (50.86%), Postives = 81/116 (69.83%), Query Frame = 0
BLAST of CSPI04G13170 vs. TAIR 10
Match: AT2G31940.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.7 bits (234), Expect = 5.5e-20 Identity = 53/107 (49.53%), Postives = 73/107 (68.22%), Query Frame = 0
BLAST of CSPI04G13170 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 5.3e-07 Identity = 36/108 (33.33%), Postives = 58/108 (53.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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