CSPI04G12760 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G12760
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Location	Chr4: 11054991 .. 11059033 (-)
RNA-Seq Expression	CSPI04G12760
Synteny	CSPI04G12760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACTCTCACACATTTTTCCTCACAAACTCCTTTCTTCTCTTCTTTAGTTTTGATCTAATTGAAGAACCCTTGTTTGAATTCTTTGGTTTTTTTTTTTTTGAAGATTTAGTTGTTTCTGGATTAGGGTTCACAATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCAAATCACTGGAAAAACTCCAGGTTCCATTTTCCTTCTCTCTCTTTATATATATATATATACATATATTCTGCTTGATATCCAAGTTCATGATTCAAACCTACGAATTCCTGCTCCATTATGTCTTACAAAGGATGTAGTAGCGTTTCTCAACAAGTGACTTTGAATCCTCACAAATTTCTATGCAAATGCCACATAATTGTTGTAATCGAATGGTAATGCTAATGGAACCACTTATTGGAAGAAATTTAATATGGGTTCATATCCGTGTACGCATTGGAATTGTTTATCCTCTTCGGAGGTTGATCCTTATAGAATTTATTTTTTCCAAAGGCGATAATCAACACTCTTATAGACATTTCTCCATCCTTAACCCACCGGCTGATTTAGTATAGGCTCAAAGGACTGAGCCCACCTCAACTTTATTCTATTTATATAACTGAAATAATACAAGAAACAGCAGCTAGCTCAGTGATAAAATTTTCCTCCGGTCTCTCTAAGCTAAGGTTCAAGCTCACTCCATACATTTTTTTTCCAAATTATTTTTCCTTAATTATAAAGCCTCCGTCAACAAATTGTTTTAGATCTGCCGCTGCCTTAATCAATAGCTTTATCCATTGTAAATGAAGAGCATCTTTAATTGATAATTTTTCTGGGAAACAATATACTAGCAATACTTATTTAAGATGATGGTGAAAGCTTATGTATGTCTAATGTTTGTCTCGGTGCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGTAGAAACCAATATGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCCTTTTTAAAGCCATCGTACGTGAGGTTCTTCAACCTTTTCTTCCTATTTACTGTTCAGATTTGGATATTGATCAGATATCTGTTAAATAAAGATATTGAAGTTGTCATCATCTTCATTCTTATTGGATTGGCTGTGAATGTGTATGTTAGTAGATCAAACGTGAGATTCAAAAAAATGTGGAAAAGTGAACCTCCCCATTAGCCAAATAGTTGCAAAAAACTCTCTATTGACTGTTTGACTGTCAAAAGAAAAATGGCTAAAAAGCAGCTAAAGAGAGTACACAATCTAAAAACCTGATAGATAATTTTATCAATAGTCTTTTGCAAAGTATAGGAGGCTTCCTTGACGTTCATTTCCAATCCAATAACCAAGACTATTGCACCCTGCCAAGAGCCTCCAAAATATAATGATCTTATCAATGAGTCCATTGCAAATGATCAGTGGAAAGATGCTCTCTAAATTCTGATCATCTTGGGTTTATATTGTTTGAAATATGTTATAAGTTTCTCATCTCTTGTAATGATTTTTTCATTGTAATCTTAAGTATTTTGTTTATTCTATCACTGTTATAAGCCCATACTCGGTTAAGTTGTTTCAAACATCCCACTCAACTGACAACTCATTCGCCAACTCTCTCCGAGAATTTGGAGAGAGGAATGAGGGGTAGCTTCTTCAGAAATTTGATTATTAACTACACAGGATTTGGTAATGGTGACTTTAACGGCTTAGGCTTATGCTGCATCAATTATTGTATTATCAATAATGGGAATTGTTGGAGCCCACAATAAACCGCCTCTTCTGCTAATTTGCTTAATAGTCAACATGGGAGCTTAGTGTTTGCATTACATGCATTTTTTTTGTTGTTGTGTCGCTGCAGTATTTGTTAAAAACAAAAGGAATTGCTTTGTCAGGTTGAAGCAATTGCACAAGATTCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGGTTTCCCTTGTTGTCTTTGACCAATACTTCCATTTGTCTAGCCCAATTGACTGAAGTGTGATGCCAGAATTCTTTTAAGTCCATTGTCAAAGTCGGCTCCATATTTAACTGAACTTGGCTTCTCTGGTCTTTTGCTTTATAAATATGAATATATGACTACCTTCAGTTACCGTGTACTGTGGACAGGAACATTTTTCACGTTTTTCACGTTTCTTGTGGAGTGATTTCTTTGGAATGAGTTCCACAAGAGTATCAACTCATATTTAGATTATACCATTTGTAGATTCTTGAATTATGATTTTATGCTAGCTTCGTTTTTCTTAAACTTAGATATTGAGAATGAAGTTTTTAGAGTTTTCTACATAGTAAATGCTCCTATCTTATCAACCAAATTGGGATATTGGAACTGTTGGTCTGACAGTAGCATAAATGACATTCGCAGTTTTCTACATGCATTCAATTATTTGCTATGGAGTCAGTCTCAAATTTTTTGTTTTTACTTCTTTCTTTTCTGATACTTGATTGTGTATAACTGTTAAATTTAAACCAAGAGTTTAAGGCCGCTTTTAAATTCTACACAATTTGGTTGCAAGGCTTTTGATTTGCCAAATTTCACCATTGTGGGTAAAGTTGAAAAGAGAACCAGCAAACGTTCCAGCCCCTTGTATTTGTATCAGTGTATGCATTTATCTGCTTCTTCACATATTTAAGGGTTCTATTGTATAATACTCATGTGCATTGTTTGACTATTACGGTTTTTAACTGCCAGCTGGGGGATACAGGATCCCAGTCCCAAGTCATACCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCTGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGTTCTCTTCTTGATTGGAGACCTCTCTTTTTCCTTTTCTTGTGGGCTCTATTTTTATGTCCTTTCATTCTCTCGTTCATTATTAAAGAAAGTTCAGTTTCACATAAAAAATAAGCTTTGTATGCTGCATTATTTTACTCAATGCCCCCACTGATAGAAGAACCTAAGCTCCATATAGTTTTGCTGTAGAGACCGATAAAAAAAATTATCTCCTTGATGATTTATATTTTGTTGGGCTTGCCATTCACAGGCAGAGTTGTGTAGTACTGAAGTTTGCACTGTCCGGGTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGGTAACAGTAATATGATGTGGTACCGCGCATTTAAATTTTAATCAGTAAACTCTCTCGGGCCTAATAGTTCTTTCATTGACTACTATTAGAGTAAAAAGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGAGGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACCGCAGAAGCTTCCCAACCTCCTCCTACAAGGAGAACAACACGAAGTTCTGCACGCCAGCGGTAGGTCTTGGAATGAGGTGCTGTTATTTTTATACAGTTTCATGTATACTATCATTAGTTTAGGAGTTGTAAAGTGTGCAACAAAAGCACTTTTTGATGTCTTGTCGAAATTGTCACCTTATTTATATTTATTTGAAGTGTCATTTTGAAATCTTTATACCCAAAACCGGAATGCAAAGTGCATTACAGTACGTAAGCCAGAAGTAGAAGTTTTCTTTTACCTCCC

mRNA sequence

TAACTCTCACACATTTTTCCTCACAAACTCCTTTCTTCTCTTCTTTAGTTTTGATCTAATTGAAGAACCCTTGTTTGAATTCTTTGGTTTTTTTTTTTTTGAAGATTTAGTTGTTTCTGGATTAGGGTTCACAATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCAAATCACTGGAAAAACTCCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGTAGAAACCAATATGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCCTTTTTAAAGCCATCGTTGAAGCAATTGCACAAGATTCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGCTGGGGGATACAGGATCCCAGTCCCAAGTCATACCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCTGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTACTGAAGTTTGCACTGTCCGGGTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAAGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGAGGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACCGCAGAAGCTTCCCAACCTCCTCCTACAAGGAGAACAACACGAAGTTCTGCACGCCAGCGGTAGGTCTTGGAATGAGGTGCTGTTATTTTTATACAGTTTCATGTATACTATCATTAGTTTAGGAGTTGTAAAGTGTGCAACAAAAGCACTTTTTGATGTCTTGTCGAAATTGTCACCTTATTTATATTTATTTGAAGTGTCATTTTGAAATCTTTATACCCAAAACCGGAATGCAAAGTGCATTACAGTACGTAAGCCAGAAGTAGAAGTTTTCTTTTACCTCCC

Coding sequence (CDS)

ATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCAAATCACTGGAAAAACTCCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGTAGAAACCAATATGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCCTTTTTAAAGCCATCGTTGAAGCAATTGCACAAGATTCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGCTGGGGGATACAGGATCCCAGTCCCAAGTCATACCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCTGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTACTGAAGTTTGCACTGTCCGGGTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAAGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGAGGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACCGCAGAAGCTTCCCAACCTCCTCCTACAAGGAGAACAACACGAAGTTCTGCACGCCAGCGGTAG

Protein sequence

MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR*

Homology

[Close]

BLAST of CSPI04G12760 vs. ExPASy Swiss-Prot
Match: Q6PAF4 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX=8355 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.3e-11
Identity = 56/209 (26.79%), Postives = 93/209 (44.50%), Query Frame = 0


Query: 71  DGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLEN 130
           DG  YY LVN V +D +K+ + Y+  ++ LF+  +E I    S  G  ++IS LNL  E 
Sbjct: 73  DGLTYYALVNRVENDITKMASDYAENELELFRKTMELII--LSDNGFATSISILNLADEL 132

Query: 131 QLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFR 190
           Q               K   K   E+ +    Q+KWL    +G   L  R  ++L  + R
Sbjct: 133 Q--------------SKKMKKKEVEQLLQSFVQEKWL-IGRNGEYTLHTRCIMELEHYIR 192

Query: 191 S--NDVPS-CEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQST 250
           +   DV   C VC +  ++++LC  E C + +H  C  K   + K+   CP C   W   
Sbjct: 193 NTYQDVAKICNVCRKVAIQSQLC--ENCGIPLHLQCAGKYF-HGKANPTCPNCNESWPHE 252

Query: 251 TSNIEPKEEEDEPDTRTQDQPSSHKRKKS 277
             ++     +    ++T+     ++R K+
Sbjct: 253 IPDLNQVSSQGPSHSQTETVRGRNQRSKN 261

[Close]

BLAST of CSPI04G12760 vs. ExPASy Swiss-Prot
Match: Q6P881 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicalis OX=8364 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.6e-09
Identity = 65/279 (23.30%), Postives = 113/279 (40.50%), Query Frame = 0


Query: 3   ELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDN-DQQVFNSYLLTINKALSFAQF 62
           +++  H   +Q L+S G +       L +        N      + ++  +NK L     
Sbjct: 4   QINESHQRFLQVLMSHGIMESSLVRALHRHCCEVHKVNYMHDNLDDFVGVLNKHLQPLFM 63

Query: 63  ELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNI 122
           ++     + DG  YY LVN V +D +K+ + Y+  ++ LF+  +E I    S  G    I
Sbjct: 64  KIEKGVGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELII--ISENGFAPPI 123

Query: 123 SALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRS 182
           S LNL  E Q               K   K   E+ +    QDKWL    +G   L  R 
Sbjct: 124 SILNLADELQ--------------SKKMKKKEVEQLLQSFVQDKWL-IGRNGEYTLHTRC 183

Query: 183 FLDLRSWFRS--NDVPS-CEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACP 242
            ++L  +  +   DV   C VC++  ++ +LC  E C + +H  C   +     +   CP
Sbjct: 184 IMELEHYILNTYQDVAKICNVCHKIAIQCQLC--ENCGIPLHLQC-AGIYFRGIANPLCP 243

Query: 243 GCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSR 278
            C   W     ++   +   +  + +Q  P   + ++SR
Sbjct: 244 NCKESWPHEIPDL--SQVSSQGPSHSQAAPVRGRNQRSR 260

[Close]

BLAST of CSPI04G12760 vs. ExPASy TrEMBL
Match: A0A0A0KZ19 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis sativus OX=3659 GN=Csa_4G269750 PE=3 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 3.4e-175
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPT 300
           GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPT
Sbjct: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPT 300

Query: 301 RRTTRSSARQR 312
           RRTTRSSARQR
Sbjct: 301 RRTTRSSARQR 311

[Close]

BLAST of CSPI04G12760 vs. ExPASy TrEMBL
Match: A0A1S3BMD8 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis melo OX=3656 GN=LOC103491611 PE=3 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 8.3e-166
Identity = 296/312 (94.87%), Postives = 303/312 (97.12%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA FKAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           ISALNLQLENQLGDTG QSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP+GFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFRSNDVPSCEVCNEAGVKAELCS+EVCTVRVH+YCLKKMLSNKKSK+ACPGC
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPP- 300
           GTRWQST SNIE KEE DEPDTRTQDQPSSHKRKKS+LNVDIDLGPNEDSTAEASQPPP 
Sbjct: 241 GTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD 300

Query: 301 TRRTTRSSARQR 312
           TRR TR+S RQR
Sbjct: 301 TRRATRNSTRQR 312

[Close]

BLAST of CSPI04G12760 vs. ExPASy TrEMBL
Match: A0A6J1JYV1 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.0e-143
Identity = 261/314 (83.12%), Postives = 284/314 (90.45%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLRED FHLLF +IT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           I+AL+LQLENQLGD GSQS VIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFR+ND+PSCEVCNEAGVKAELCS E CTVRVH+YCLKKMLSNKKSK+ACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDS--TAEASQPP 300
           GT+W+ST  N+E KEEEDEPD R Q Q SSHKRKK+RLN DID GPN DS   A+ASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 P-TRRTTRSSARQR 312
           P TRR TRSSA QR
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]

BLAST of CSPI04G12760 vs. ExPASy TrEMBL
Match: A0A6J1K5P2 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.0e-143
Identity = 261/314 (83.12%), Postives = 284/314 (90.45%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLRED FHLLF +IT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           I+AL+LQLENQLGD GSQS VIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFR+ND+PSCEVCNEAGVKAELCS E CTVRVH+YCLKKMLSNKKSK+ACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDS--TAEASQPP 300
           GT+W+ST  N+E KEEEDEPD R Q Q SSHKRKK+RLN DID GPN DS   A+ASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 P-TRRTTRSSARQR 312
           P TRR TRSSA QR
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]

BLAST of CSPI04G12760 vs. ExPASy TrEMBL
Match: A0A6J1DI86 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.8e-143
Identity = 260/313 (83.07%), Postives = 286/313 (91.37%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQ+LL+RGPLREDQFHL+F +ITGK+PDNDQQ+FN+YLL INKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQ-SQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGV 180
           I+AL+LQLENQLGD GSQ SQVIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPG 240
           RSFLDLRSWFR+ND+PSCEVCNEAGVKAELC  E CTVRVHQYCLKKMLSNKKSK+ACPG
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPP 300
           CGT+W+ST +N+E KEEEDEPD RTQ Q SS +RKKSRLN+D+D   ++ + A ASQPPP
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMD---SDSNGASASQPPP 300

Query: 301 -TRRTTRSSARQR 312
            TRR TRSSARQR
Sbjct: 301 ETRRVTRSSARQR 310

[Close]

BLAST of CSPI04G12760 vs. NCBI nr
Match: XP_008449859.1 (PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo])

HSP 1 Score: 592.8 bits (1527), Expect = 1.7e-165
Identity = 296/312 (94.87%), Postives = 303/312 (97.12%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA FKAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           ISALNLQLENQLGDTG QSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP+GFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFRSNDVPSCEVCNEAGVKAELCS+EVCTVRVH+YCLKKMLSNKKSK+ACPGC
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPP- 300
           GTRWQST SNIE KEE DEPDTRTQDQPSSHKRKKS+LNVDIDLGPNEDSTAEASQPPP 
Sbjct: 241 GTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD 300

Query: 301 TRRTTRSSARQR 312
           TRR TR+S RQR
Sbjct: 301 TRRATRNSTRQR 312

[Close]

BLAST of CSPI04G12760 vs. NCBI nr
Match: XP_031740711.1 (non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus] >XP_031740712.1 non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus])

HSP 1 Score: 588.6 bits (1516), Expect = 3.2e-164
Identity = 303/340 (89.12%), Postives = 305/340 (89.71%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120

Query: 121 ISALNLQLENQLGD-------------TGSQSQVI----------------PAAFKNFSK 180
           ISALNLQLENQ  D             T  +S  +                PAAFKNFSK
Sbjct: 121 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 180

Query: 181 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240
           SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS
Sbjct: 181 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240

Query: 241 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 300
           TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH
Sbjct: 241 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 300

Query: 301 KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 312
           KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
Sbjct: 301 KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 340

[Close]

BLAST of CSPI04G12760 vs. NCBI nr
Match: KAE8649414.1 (hypothetical protein Csa_021680 [Cucumis sativus])

HSP 1 Score: 588.6 bits (1516), Expect = 3.2e-164
Identity = 303/340 (89.12%), Postives = 305/340 (89.71%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN
Sbjct: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216

Query: 121 ISALNLQLENQLGD-------------TGSQSQVI----------------PAAFKNFSK 180
           ISALNLQLENQ  D             T  +S  +                PAAFKNFSK
Sbjct: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276

Query: 181 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240
           SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS
Sbjct: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336

Query: 241 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 300
           TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH
Sbjct: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 396

Query: 301 KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 312
           KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
Sbjct: 397 KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 436

[Close]

BLAST of CSPI04G12760 vs. NCBI nr
Match: XP_038900599.1 (non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 555.8 bits (1431), Expect = 2.3e-154
Identity = 275/311 (88.42%), Postives = 291/311 (93.57%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQ+LL+RGPLRED FHLLF +ITGKTPDNDQQ+FNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQALLARGPLREDHFHLLFTRITGKTPDNDQQLFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           ISALNLQLENQ+GDTGSQSQVIPAAFKNFS S KEKTIAELAQDKWL C+PDGFVNLGVR
Sbjct: 121 ISALNLQLENQMGDTGSQSQVIPAAFKNFSISLKEKTIAELAQDKWLSCSPDGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFRSNDVPSCEVCNEAGVKAELC+TE CTVRVH+YCLKKMLSNKKSK+ACPGC
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCNTEDCTVRVHRYCLKKMLSNKKSKRACPGC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPT 300
           G +W+ST SNIE +EEEDEPDT TQDQPSSHKRKKSRLN+DIDLG NED  AEA QPP +
Sbjct: 241 GIQWRSTASNIESREEEDEPDTHTQDQPSSHKRKKSRLNIDIDLGSNEDCMAEAFQPPAS 300

Query: 301 RRTTRSSARQR 312
           RR TR SAR R
Sbjct: 301 RRATRRSARPR 311

[Close]

BLAST of CSPI04G12760 vs. NCBI nr
Match: XP_038900598.1 (non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 555.8 bits (1431), Expect = 2.3e-154
Identity = 275/311 (88.42%), Postives = 291/311 (93.57%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           MPELSWRHHTLIQ+LL+RGPLRED FHLLF +ITGKTPDNDQQ+FNSYLLTINKALSFAQ
Sbjct: 23  MPELSWRHHTLIQALLARGPLREDHFHLLFTRITGKTPDNDQQLFNSYLLTINKALSFAQ 82

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 83  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 142

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           ISALNLQLENQ+GDTGSQSQVIPAAFKNFS S KEKTIAELAQDKWL C+PDGFVNLGVR
Sbjct: 143 ISALNLQLENQMGDTGSQSQVIPAAFKNFSISLKEKTIAELAQDKWLSCSPDGFVNLGVR 202

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFRSNDVPSCEVCNEAGVKAELC+TE CTVRVH+YCLKKMLSNKKSK+ACPGC
Sbjct: 203 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCNTEDCTVRVHRYCLKKMLSNKKSKRACPGC 262

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPT 300
           G +W+ST SNIE +EEEDEPDT TQDQPSSHKRKKSRLN+DIDLG NED  AEA QPP +
Sbjct: 263 GIQWRSTASNIESREEEDEPDTHTQDQPSSHKRKKSRLNIDIDLGSNEDCMAEAFQPPAS 322

Query: 301 RRTTRSSARQR 312
           RR TR SAR R
Sbjct: 323 RRATRRSARPR 333

[Close]

BLAST of CSPI04G12760 vs. TAIR 10
Match: AT5G21140.1 (embryo defective 1379 )

HSP 1 Score: 334.0 bits (855), Expect = 1.3e-91
Identity = 171/313 (54.63%), Postives = 221/313 (70.61%), Query Frame = 0


Query: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M  LSW+HHTLIQ+L+SRGPL+E +FH +F  +TG+ P   +++F+ YLL INK LS+  
Sbjct: 1   MASLSWKHHTLIQALISRGPLKEKEFHSIFTAVTGRNPVTVKKIFDKYLLEINKELSYVH 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120
           FEL+ CR+QYDG+V YG+VNNV+DDQSKLGTKYSVPQIA FK I+EAIAQD +AQG IS+
Sbjct: 61  FELKACRDQYDGQVCYGVVNNVADDQSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISS 120

Query: 121 ISALNLQLENQLGDTGSQS-QVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGV 180
             ALN++LENQ+    S S Q +P AFKNFS + KEKT+ EL +DKWL  T +  + LG+
Sbjct: 121 FDALNIRLENQISSEASSSQQQVPPAFKNFSMTQKEKTLDELVRDKWLCRTRERNIGLGI 180

Query: 181 RSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPG 240
           RS LDLRSWFR+NDVPSCEVCNEAGVKA+LC TE C VR+H+YCLKK+LS +  K+ C G
Sbjct: 181 RSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPTEGCPVRIHKYCLKKLLSQRDDKR-CSG 240

Query: 241 CGTRWQ-STTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPP 300
           CG  W  S  +  E  EE    +  ++ Q ++ K K+ R   D     +  ++  ++   
Sbjct: 241 CGKPWPLSKITKTEAAEEAMNDEEESETQATAPKAKRRRQQRDSTENGSSQASLASTSGA 300

Query: 301 PTRRTTRSSARQR 312
            TRR TRS    R
Sbjct: 301 NTRRVTRSVGHSR 312

The following BLAST results are available for this feature:

BLAST of CSPI04G12760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PAF4	2.3e-11	26.79	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX...	[more]
Q6P881	3.6e-09	23.30	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicali...	[more]

BLAST of CSPI04G12760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ19	3.4e-175	100.00	Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis sativus O...	[more]
A0A1S3BMD8	8.3e-166	94.87	Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis melo OX=3...	[more]
A0A6J1JYV1	2.0e-143	83.12	Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ...	[more]
A0A6J1K5P2	2.0e-143	83.12	Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ...	[more]
A0A6J1DI86	9.8e-143	83.07	Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant...	[more]

BLAST of CSPI04G12760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449859.1	1.7e-165	94.87	PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis ...	[more]
XP_031740711.1	3.2e-164	89.12	non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus] >X...	[more]
KAE8649414.1	3.2e-164	89.12	hypothetical protein Csa_021680 [Cucumis sativus]	[more]
XP_038900599.1	2.3e-154	88.42	non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincas...	[more]
XP_038900598.1	2.3e-154	88.42	non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincas...	[more]

BLAST of CSPI04G12760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21140.1	1.3e-91	54.63	embryo defective 1379	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014857	Zinc finger, RING-like	PFAM	PF08746	zf-RING-like	coord: 213..256 e-value: 7.7E-8 score: 32.5
IPR014857	Zinc finger, RING-like	CDD	cd16493	RING-CH-C4HC3_NSE1	coord: 212..258 e-value: 1.10606E-11 score: 57.0545
IPR011513	Non-structural maintenance of chromosomes element 1	PFAM	PF07574	SMC_Nse1	coord: 8..201 e-value: 4.6E-44 score: 150.7
IPR011513	Non-structural maintenance of chromosomes element 1	PANTHER	PTHR20973	NON-SMC ELEMENT 1-RELATED	coord: 1..324
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 84..209 e-value: 9.8E-19 score: 69.3
None	No IPR available	GENE3D	3.90.1150.220		coord: 5..81 e-value: 5.4E-14 score: 54.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..321
None	No IPR available	PANTHER	PTHR20973:SF1	BNAANNG27900D PROTEIN	coord: 1..324
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 211..270 e-value: 8.8E-11 score: 43.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G12760.1	CSPI04G12760.1	mRNA
CSPI04G12760.2	CSPI04G12760.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006301	postreplication repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030915	Smc5-Smc6 complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity