CSPI04G12040 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G12040
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Gag/pol protein
Location	Chr4: 10372367 .. 10373341 (+)
RNA-Seq Expression	CSPI04G12040
Synteny	CSPI04G12040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAAAAGATCTTTTACTGGAAAAGATTATAGAGCCAAAGAGCCCCTAGAACATATACATTTAGACCTCTGTGGTCCGATAAATGTAAAAGCTAGAGGAGGTTTTGATTATTCAAGGTATGGTTATTTATACTTAGAGCATAAGACTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGGCTGAAATTGAAAATCTATTAAGTAAAAAGATTAAAATACTACAATGTGTTCAAGGTGGAGAGTACATGGATTTGAGATTCCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACATCTCAACAAAATGGTGTATCGTAAAGGAGAAATATAACCTTGTTAGACATGGTGTGTTCAATGATGAGTTATGCTCAATTGCCTAGCTCGTTTTGGAGGTATGTAGTAGAGACTACAGTTCATATCTGATTTGTTGGTTACCCTAAAGAAATAAGAGGTGGTATATTCTTCGATCCACAAGAAAACAGAGTATTTATATCAATAAATGTTACTTTCTGGAAAGAAGACCACATGAGAGATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGATTGTTGATAAAACTGGTTCCTCATTAAGAGTTGATGAAACTAACACATTAGGTCAGCCTCATCCTTCTCAATCGTTAAGAATGTCTTATTATAGTGGGAGGGTTGTATCACAACCTAACCGTTACTAGGGTTTAACTGAAACTCAAGTTGCTATACTAGATGATGACGTTGAGAATCCATTATCCTATAAACAGGTAATGAATGATGTAGACAAGAACCAATGGGTCACAGCCATGTGCCTTGAAATAGAGTCTATGTACTTCAATTCAGTGTAGGAGCTTCTAGATCTATCTGAAGGGGTGAAACCTATAGAGTGCAAATGGATCTACAAGAAAAAGAGATTCAGCCGGAAAGATACAGACCTT

mRNA sequence

ATGACTAAAAGATCTTTTACTGGAAAAGATTATAGAGCCAAAGAGCCCCTAGAACATATACATTTAGACCTCTGTGGTCCGATAAATGTAAAAGCTAGAGGAGGTTTTGATTATTCAAGGTATGGTTATTTATACTTAGAGCATAAGACTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGGCTGAAATTGAAAATCTATTAAGTAAAAAGATTAAAATACTACAATGTGTTCAAGGTGGAGAGTACATGGATTTGAGATTCCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGAAATAAGAGGTGGTATATTCTTCGATCCACAAGAAAACAGAGTATTTATATCAATAAATGTTACTTTCTGGAAAGAAGACCACATGAGAGATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGATTGTTGATAAAACTGGTTCCTCATTAAGAGGTTTAACTGAAACTCAAGTTGCTATACTAGATGATGACGTTGAGAATCCATTATCCTATAAACAGGAGCTTCTAGATCTATCTGAAGGGGTGAAACCTATAGAGTGCAAATGGATCTACAAGAAAAAGAGATTCAGCCGGAAAGATACAGACCTT

Coding sequence (CDS)

ATGACTAAAAGATCTTTTACTGGAAAAGATTATAGAGCCAAAGAGCCCCTAGAACATATACATTTAGACCTCTGTGGTCCGATAAATGTAAAAGCTAGAGGAGGTTTTGATTATTCAAGGTATGGTTATTTATACTTAGAGCATAAGACTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGGCTGAAATTGAAAATCTATTAAGTAAAAAGATTAAAATACTACAATGTGTTCAAGGTGGAGAGTACATGGATTTGAGATTCCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGAAATAAGAGGTGGTATATTCTTCGATCCACAAGAAAACAGAGTATTTATATCAATAAATGTTACTTTCTGGAAAGAAGACCACATGAGAGATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGATTGTTGATAAAACTGGTTCCTCATTAAGAGGTTTAACTGAAACTCAAGTTGCTATACTAGATGATGACGTTGAGAATCCATTATCCTATAAACAGGAGCTTCTAGATCTATCTGAAGGGGTGAAACCTATAGAGTGCAAATGGATCTACAAGAAAAAGAGATTCAGCCGGAAAGATACAGACCTT

Protein sequence

MTKRSFTGKDYRAKEPLEHIHLDLCGPINVKARGGFDYSRYGYLYLEHKTEALEKFKEYKAEIENLLSKKIKILQCVQGGEYMDLRFQDYMIEHGIQSQLSAPEIRGGIFFDPQENRVFISINVTFWKEDHMRDHKPRSKLVLSEATDESTRIVDKTGSSLRGLTETQVAILDDDVENPLSYKQELLDLSEGVKPIECKWIYKKKRFSRKDTDL

Homology

[Close]

BLAST of CSPI04G12040 vs. ExPASy TrEMBL
Match: A0A5A7VHC8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001830 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 1.0e-74
Identity = 169/305 (55.41%), Postives = 186/305 (60.98%), Query Frame = 0


Query: 1   MTKRSFTGKDYRAKEPLEHIHLDLCGPINVKARGGF--------DYSRYGYLYL-EHKTE 60
           MTKR FTGK YRAKEPLE IH DLCGP+NVKARG F        DYSRYGYLYL EHK+E
Sbjct: 237 MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHKSE 296

Query: 61  ALEKFKEYKAEIENLLSKKIKILQCVQGGEYMDLRFQDYMIEHGIQSQLSAP-------- 120
           ALEKFKEYK+E+ENLLSKKIKIL+  +G EYM+LRFQDYMIE+GIQSQLSAP        
Sbjct: 297 ALEKFKEYKSEVENLLSKKIKILRSDRGEEYMNLRFQDYMIEYGIQSQLSAPGLSSTRVS 356

Query: 121 --------------------EIRGGIFFDPQENRVFISINVTFWKEDHMRDHKPRSKLVL 180
                               E RGG+FFDPQENRVF+S N TF +EDHMRDHKPRSKLVL
Sbjct: 357 DKSQEVGTSFKLCQFAGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVL 416

Query: 181 SEATDESTRIVDKTGSSLR---------------------------------GLTETQVA 209
           +EATDESTR+ D+ G S R                                 GLTETQV 
Sbjct: 417 NEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQPNRYLGLTETQVV 476

[Close]

BLAST of CSPI04G12040 vs. ExPASy TrEMBL
Match: A0A5A7VJG3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001110 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 174/331 (52.57%), Postives = 185/331 (55.89%), Query Frame = 0


Query: 1   MTKRSFTGKDYRAKEPLEHIHLDLCGPINVKARGGF--------DYSRYGYLYL-EHKTE 60
           MTKR FTGKDYRAKEPLE IH DLCGP+NVKARGGF        DYSRYGYLYL EHK E
Sbjct: 361 MTKRPFTGKDYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKYE 420

Query: 61  ALEKFKEYKAEIENLLSKKIKILQCVQGGEYMDLRFQDYMIEHGIQSQLSAP-------- 120
           ALEKFKEYK E+ENLLSKKIKIL+  +GGEYMDLRFQDYMIEHGIQSQLSAP        
Sbjct: 421 ALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGV 480

Query: 121 ----------------------------------------------EIRGGIFFDPQENR 180
                                                         E RGG+FFDPQENR
Sbjct: 481 SERRNRTLLDMVRSMMSYAQLPSSFWGTPKKLEPRSRLCQFVGYPKERRGGLFFDPQENR 540

Query: 181 VFISINVTFWKEDHMRDHKPRSKLVLSEATDESTRIVDKTGSSLR--------------- 209
           VF+S N TF +ED MRDHKPRSKLVL EATDESTR+VD+   S R               
Sbjct: 541 VFVSTNTTFLEEDRMRDHKPRSKLVLCEATDESTRVVDEVDPSSRVDETTTSGQSHPSQS 600

[Close]

BLAST of CSPI04G12040 vs. ExPASy TrEMBL
Match: A0A5D3DZX8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00320 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.4e-71
Identity = 172/345 (49.86%), Postives = 185/345 (53.62%), Query Frame = 0


Query: 1   MTKRSFTGKDYRAKEPLEHIHLDLCGPINVKARGGF--------DYSRYGYLYL-EHKTE 60
           MTKR FT K YRAKEPLE IH DLCGP+NVKARGGF        DYSRYGYLYL EHK+E
Sbjct: 237 MTKRPFTEKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSE 296

Query: 61  ALEKFKEYKAEIENLLSKKIKILQCVQGGEYMDLRFQDYMIEHGIQSQLSAP-------- 120
           ALEKFKEYKAE+ENLLSKKIKIL+  QGGEYMDLRFQDYMIEHGIQSQLSAP        
Sbjct: 297 ALEKFKEYKAEVENLLSKKIKILRSDQGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGV 356

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 357 SERRNRTLLDKVRSMMSYTQLPSSFWGDCSSYLEQSHVLVTNPKKLGPRSRLCQFVGYPK 416

Query: 181 EIRGGIFFDPQENRVFISINVTFWKEDHMRDHKPRSKLVLSEATDESTRIVDKTGSSLR- 209
           E RGG+ FDPQENRV +S N TF +EDH RDHKPRSKLVL+EATDESTR+VD+ G S R 
Sbjct: 417 ETRGGLLFDPQENRVLVSTNATFLEEDHTRDHKPRSKLVLNEATDESTRVVDEVGPSSRV 476

[Close]

BLAST of CSPI04G12040 vs. ExPASy TrEMBL
Match: A0A5A7VDX8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00700 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.0e-70
Identity = 170/345 (49.28%), Postives = 184/345 (53.33%), Query Frame = 0


Query: 1   MTKRSFTGKDYRAKEPLEHIHLDLCGPINVKARGGF--------DYSRYGYLYL-EHKTE 60
           MTKR FT K YRAKEPLE IH DLCGP+NVKARGGF        DYSRYGYLYL EHK+E
Sbjct: 226 MTKRPFTEKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSE 285

Query: 61  ALEKFKEYKAEIENLLSKKIKILQCVQGGEYMDLRFQDYMIEHGIQSQLSAP-------- 120
           ALEKFKEYKAE+ENLLSKKIKIL+  QGGEYMDLRFQDYMIEHGIQSQLSAP        
Sbjct: 286 ALEKFKEYKAEVENLLSKKIKILRSDQGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGV 345

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 346 SERRNRTLLDKVRSMMSYTQLPSSFWGDCSSYLEQSHVLVTNPKKLGPRSRLCQFVGYPK 405

Query: 181 EIRGGIFFDPQENRVFISINVTFWKEDHMRDHKPRSKLVLSEATDESTRIVDKTGSSLR- 209
           E RGG+ FDPQENRV +S N TF +EDH RDHKPRSKLVL+EATDESTR+VD+ G S R 
Sbjct: 406 ETRGGLLFDPQENRVLVSTNATFLEEDHTRDHKPRSKLVLNEATDESTRVVDEFGPSSRV 465

[Close]

BLAST of CSPI04G12040 vs. ExPASy TrEMBL
Match: A0A5A7SIN2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2405G00060 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.5e-70
Identity = 169/342 (49.42%), Postives = 184/342 (53.80%), Query Frame = 0


Query: 1   MTKRSFTGKDYRAKEPLEHIHLDLCGPINVKARGGF--------DYSRYGYLYL-EHKTE 60
           MTKR FT K YRAKEPLE IH DLCG +NVKARGGF        DYSRYGYLYL EHK+E
Sbjct: 254 MTKRPFTEKGYRAKEPLELIHSDLCGLMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSE 313

Query: 61  ALEKFKEYKAEIENLLSKKIKILQCVQGGEYMDLRFQDYMIEHGIQSQLSAP-------- 120
           ALEKFKEYK E+ENLLSKKIKIL+  +GGEYMDLRFQDYMIEHGIQSQLS P        
Sbjct: 314 ALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSTPVETAVHIL 373

Query: 121 ---------------------------------------------------------EIR 180
                                                                    E R
Sbjct: 374 NNAPSKSVSETPFELWRGRKPSLSHFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETR 433

Query: 181 GGIFFDPQENRVFISINVTFWKEDHMRDHKPRSKLVLSEATDESTRIVDKTGSSLR---- 209
           GG+FFDPQENRVF+S N TF +EDHMR+HKPRSKLVLSEATD+STR+VD+ G S R    
Sbjct: 434 GGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDET 493

[Close]

BLAST of CSPI04G12040 vs. NCBI nr
Match: KAA0067493.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 289.7 bits (740), Expect = 2.1e-74
Identity = 169/305 (55.41%), Postives = 186/305 (60.98%), Query Frame = 0


Query: 1   MTKRSFTGKDYRAKEPLEHIHLDLCGPINVKARGGF--------DYSRYGYLYL-EHKTE 60
           MTKR FTGK YRAKEPLE IH DLCGP+NVKARG F        DYSRYGYLYL EHK+E
Sbjct: 237 MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHKSE 296

Query: 61  ALEKFKEYKAEIENLLSKKIKILQCVQGGEYMDLRFQDYMIEHGIQSQLSAP-------- 120
           ALEKFKEYK+E+ENLLSKKIKIL+  +G EYM+LRFQDYMIE+GIQSQLSAP        
Sbjct: 297 ALEKFKEYKSEVENLLSKKIKILRSDRGEEYMNLRFQDYMIEYGIQSQLSAPGLSSTRVS 356

Query: 121 --------------------EIRGGIFFDPQENRVFISINVTFWKEDHMRDHKPRSKLVL 180
                               E RGG+FFDPQENRVF+S N TF +EDHMRDHKPRSKLVL
Sbjct: 357 DKSQEVGTSFKLCQFAGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLVL 416

Query: 181 SEATDESTRIVDKTGSSLR---------------------------------GLTETQVA 209
           +EATDESTR+ D+ G S R                                 GLTETQV 
Sbjct: 417 NEATDESTRVFDEVGPSSRVDETTTSSQSHPSQSLRMPRCSGRIVSQPNRYLGLTETQVV 476

[Close]

BLAST of CSPI04G12040 vs. NCBI nr
Match: KAA0067938.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 286.2 bits (731), Expect = 2.3e-73
Identity = 174/331 (52.57%), Postives = 185/331 (55.89%), Query Frame = 0


Query: 1   MTKRSFTGKDYRAKEPLEHIHLDLCGPINVKARGGF--------DYSRYGYLYL-EHKTE 60
           MTKR FTGKDYRAKEPLE IH DLCGP+NVKARGGF        DYSRYGYLYL EHK E
Sbjct: 361 MTKRPFTGKDYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKYE 420

Query: 61  ALEKFKEYKAEIENLLSKKIKILQCVQGGEYMDLRFQDYMIEHGIQSQLSAP-------- 120
           ALEKFKEYK E+ENLLSKKIKIL+  +GGEYMDLRFQDYMIEHGIQSQLSAP        
Sbjct: 421 ALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGV 480

Query: 121 ----------------------------------------------EIRGGIFFDPQENR 180
                                                         E RGG+FFDPQENR
Sbjct: 481 SERRNRTLLDMVRSMMSYAQLPSSFWGTPKKLEPRSRLCQFVGYPKERRGGLFFDPQENR 540

Query: 181 VFISINVTFWKEDHMRDHKPRSKLVLSEATDESTRIVDKTGSSLR--------------- 209
           VF+S N TF +ED MRDHKPRSKLVL EATDESTR+VD+   S R               
Sbjct: 541 VFVSTNTTFLEEDRMRDHKPRSKLVLCEATDESTRVVDEVDPSSRVDETTTSGQSHPSQS 600

[Close]

BLAST of CSPI04G12040 vs. NCBI nr
Match: TYK28885.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 278.5 bits (711), Expect = 4.9e-71
Identity = 172/345 (49.86%), Postives = 185/345 (53.62%), Query Frame = 0


Query: 1   MTKRSFTGKDYRAKEPLEHIHLDLCGPINVKARGGF--------DYSRYGYLYL-EHKTE 60
           MTKR FT K YRAKEPLE IH DLCGP+NVKARGGF        DYSRYGYLYL EHK+E
Sbjct: 237 MTKRPFTEKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSE 296

Query: 61  ALEKFKEYKAEIENLLSKKIKILQCVQGGEYMDLRFQDYMIEHGIQSQLSAP-------- 120
           ALEKFKEYKAE+ENLLSKKIKIL+  QGGEYMDLRFQDYMIEHGIQSQLSAP        
Sbjct: 297 ALEKFKEYKAEVENLLSKKIKILRSDQGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGV 356

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 357 SERRNRTLLDKVRSMMSYTQLPSSFWGDCSSYLEQSHVLVTNPKKLGPRSRLCQFVGYPK 416

Query: 181 EIRGGIFFDPQENRVFISINVTFWKEDHMRDHKPRSKLVLSEATDESTRIVDKTGSSLR- 209
           E RGG+ FDPQENRV +S N TF +EDH RDHKPRSKLVL+EATDESTR+VD+ G S R 
Sbjct: 417 ETRGGLLFDPQENRVLVSTNATFLEEDHTRDHKPRSKLVLNEATDESTRVVDEVGPSSRV 476

[Close]

BLAST of CSPI04G12040 vs. NCBI nr
Match: KAA0065400.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 4.1e-70
Identity = 170/345 (49.28%), Postives = 184/345 (53.33%), Query Frame = 0


Query: 1   MTKRSFTGKDYRAKEPLEHIHLDLCGPINVKARGGF--------DYSRYGYLYL-EHKTE 60
           MTKR FT K YRAKEPLE IH DLCGP+NVKARGGF        DYSRYGYLYL EHK+E
Sbjct: 226 MTKRPFTEKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSE 285

Query: 61  ALEKFKEYKAEIENLLSKKIKILQCVQGGEYMDLRFQDYMIEHGIQSQLSAP-------- 120
           ALEKFKEYKAE+ENLLSKKIKIL+  QGGEYMDLRFQDYMIEHGIQSQLSAP        
Sbjct: 286 ALEKFKEYKAEVENLLSKKIKILRSDQGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGV 345

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 346 SERRNRTLLDKVRSMMSYTQLPSSFWGDCSSYLEQSHVLVTNPKKLGPRSRLCQFVGYPK 405

Query: 181 EIRGGIFFDPQENRVFISINVTFWKEDHMRDHKPRSKLVLSEATDESTRIVDKTGSSLR- 209
           E RGG+ FDPQENRV +S N TF +EDH RDHKPRSKLVL+EATDESTR+VD+ G S R 
Sbjct: 406 ETRGGLLFDPQENRVLVSTNATFLEEDHTRDHKPRSKLVLNEATDESTRVVDEFGPSSRV 465

[Close]

BLAST of CSPI04G12040 vs. NCBI nr
Match: KAA0025159.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 9.2e-70
Identity = 169/342 (49.42%), Postives = 184/342 (53.80%), Query Frame = 0


Query: 1   MTKRSFTGKDYRAKEPLEHIHLDLCGPINVKARGGF--------DYSRYGYLYL-EHKTE 60
           MTKR FT K YRAKEPLE IH DLCG +NVKARGGF        DYSRYGYLYL EHK+E
Sbjct: 254 MTKRPFTEKGYRAKEPLELIHSDLCGLMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSE 313

Query: 61  ALEKFKEYKAEIENLLSKKIKILQCVQGGEYMDLRFQDYMIEHGIQSQLSAP-------- 120
           ALEKFKEYK E+ENLLSKKIKIL+  +GGEYMDLRFQDYMIEHGIQSQLS P        
Sbjct: 314 ALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSTPVETAVHIL 373

Query: 121 ---------------------------------------------------------EIR 180
                                                                    E R
Sbjct: 374 NNAPSKSVSETPFELWRGRKPSLSHFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETR 433

Query: 181 GGIFFDPQENRVFISINVTFWKEDHMRDHKPRSKLVLSEATDESTRIVDKTGSSLR---- 209
           GG+FFDPQENRVF+S N TF +EDHMR+HKPRSKLVLSEATD+STR+VD+ G S R    
Sbjct: 434 GGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDET 493

The following BLAST results are available for this feature:

BLAST of CSPI04G12040 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI04G12040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHC8	1.0e-74	55.41	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G00183...	[more]
A0A5A7VJG3	1.1e-73	52.57	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G0011...	[more]
A0A5D3DZX8	2.4e-71	49.86	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G0032...	[more]
A0A5A7VDX8	2.0e-70	49.28	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00700...	[more]
A0A5A7SIN2	4.5e-70	49.42	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2405G000...	[more]

BLAST of CSPI04G12040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067493.1	2.1e-74	55.41	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0067938.1	2.3e-73	52.57	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK28885.1	4.9e-71	49.86	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0065400.1	4.1e-70	49.28	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025159.1	9.2e-70	49.42	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI04G12040 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 49..69
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 8..149 e-value: 2.8E-7 score: 32.3
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 9..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G12040.1	CSPI04G12040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding